Metagenome Family F068334

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068334
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	45 residues
Representative Sequence	MRVLGWVLAGALALTASIGVQAGSLGPGWYPMPNGWDGDWRRAP
Number of Associated Samples	79
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.77 %
% of genes near scaffold ends (potentially truncated)	99.19 %
% of genes from short scaffolds (< 2000 bps)	91.94 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.613 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (63.710 % of family members)
Environment Ontology (ENVO)	Unclassified (92.742 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (62.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 0.00% Coil/Unstructured: 62.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF04392	ABC_sub_bind	3.23
PF07690	MFS_1	2.42
PF01914	MarC	2.42
PF02586	SRAP	1.61
PF04828	GFA	1.61
PF08450	SGL	1.61
PF00561	Abhydrolase_1	1.61
PF00467	KOW	0.81
PF11026	DUF2721	0.81
PF00027	cNMP_binding	0.81
PF01381	HTH_3	0.81
PF13767	DUF4168	0.81
PF00296	Bac_luciferase	0.81
PF02796	HTH_7	0.81
PF03070	TENA_THI-4	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.23
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	2.42
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.61
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	1.61
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	1.61
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.61
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.61 %
Unclassified	root	N/A	23.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.61 %
Unclassified	root	N/A	23.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.61 %
Unclassified	root	N/A	23.39 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.35 %
Unclassified	root	N/A	23.39 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	63.71 %
Unclassified	root	N/A	23.39 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.03 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	52.42 %
Unclassified	root	N/A	23.39 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.23 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.81 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.61 %
Unclassified	root	N/A	23.39 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	3.23 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.61 %
Unclassified	root	N/A	23.39 %
Noviherbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum	3.23 %
Methylomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.61 %
Unclassified	root	N/A	23.39 %
Noviherbaspirillum denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	3.23 %
unclassified Methylomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.61 %
Unclassified	root	N/A	23.39 %
Noviherbaspirillum denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	3.23 %
Methylomonas sp. WSC-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas → Methylomonas sp. WSC-6	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005764\|Ga0066903_105241235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300010046\|Ga0126384_11089186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300010358\|Ga0126370_11689010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300010376\|Ga0126381_102953342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300010376\|Ga0126381_103075388	Not Available	661	Open in IMG/M
3300012971\|Ga0126369_10069484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3082	Open in IMG/M
3300012971\|Ga0126369_12895138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300016270\|Ga0182036_10851818	Not Available	745	Open in IMG/M
3300016294\|Ga0182041_10065710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2527	Open in IMG/M
3300016294\|Ga0182041_10276403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1380	Open in IMG/M
3300016294\|Ga0182041_10875726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	806	Open in IMG/M
3300016319\|Ga0182033_10168141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1712	Open in IMG/M
3300016319\|Ga0182033_10456057	Not Available	1091	Open in IMG/M
3300016319\|Ga0182033_11287280	Not Available	656	Open in IMG/M
3300016319\|Ga0182033_11354186	Not Available	640	Open in IMG/M
3300016341\|Ga0182035_10656790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300016357\|Ga0182032_10437802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1065	Open in IMG/M
3300016357\|Ga0182032_10780306	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300016357\|Ga0182032_11105088	Not Available	680	Open in IMG/M
3300016371\|Ga0182034_11367249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300016387\|Ga0182040_10128899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	1769	Open in IMG/M
3300016387\|Ga0182040_10252714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1325	Open in IMG/M
3300016387\|Ga0182040_11243852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300016404\|Ga0182037_10178973	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300016404\|Ga0182037_10721935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	854	Open in IMG/M
3300016422\|Ga0182039_11195719	Not Available	687	Open in IMG/M
3300016422\|Ga0182039_11658391	Not Available	584	Open in IMG/M
3300016445\|Ga0182038_10946514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300016445\|Ga0182038_12120726	Not Available	510	Open in IMG/M
3300021168\|Ga0210406_10698722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300021560\|Ga0126371_11609950	Not Available	775	Open in IMG/M
3300031543\|Ga0318516_10227800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1078	Open in IMG/M
3300031545\|Ga0318541_10145018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1300	Open in IMG/M
3300031545\|Ga0318541_10258273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300031546\|Ga0318538_10626698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300031546\|Ga0318538_10769415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031561\|Ga0318528_10105223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1483	Open in IMG/M
3300031564\|Ga0318573_10180461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1115	Open in IMG/M
3300031564\|Ga0318573_10545568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300031564\|Ga0318573_10615543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300031572\|Ga0318515_10055813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	1998	Open in IMG/M
3300031572\|Ga0318515_10118209	Not Available	1400	Open in IMG/M
3300031572\|Ga0318515_10149194	Not Available	1246	Open in IMG/M
3300031573\|Ga0310915_10732630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300031640\|Ga0318555_10444867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300031640\|Ga0318555_10790542	Not Available	512	Open in IMG/M
3300031668\|Ga0318542_10044824	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300031681\|Ga0318572_10224445	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300031681\|Ga0318572_10233235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1080	Open in IMG/M
3300031681\|Ga0318572_10254155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1034	Open in IMG/M
3300031682\|Ga0318560_10798743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031719\|Ga0306917_10056168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	2670	Open in IMG/M
3300031719\|Ga0306917_10149522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1731	Open in IMG/M
3300031723\|Ga0318493_10522108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300031724\|Ga0318500_10283184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300031724\|Ga0318500_10657043	Not Available	533	Open in IMG/M
3300031736\|Ga0318501_10609680	Not Available	599	Open in IMG/M
3300031736\|Ga0318501_10718040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300031744\|Ga0306918_10664826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	815	Open in IMG/M
3300031747\|Ga0318502_10363075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	858	Open in IMG/M
3300031747\|Ga0318502_10599139	Not Available	663	Open in IMG/M
3300031748\|Ga0318492_10376016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300031751\|Ga0318494_10096278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1627	Open in IMG/M
3300031763\|Ga0318537_10270951	Not Available	629	Open in IMG/M
3300031764\|Ga0318535_10421306	Not Available	595	Open in IMG/M
3300031768\|Ga0318509_10746809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300031770\|Ga0318521_10391439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300031771\|Ga0318546_10079130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	2117	Open in IMG/M
3300031777\|Ga0318543_10247775	Not Available	794	Open in IMG/M
3300031778\|Ga0318498_10370439	Not Available	638	Open in IMG/M
3300031780\|Ga0318508_1064686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	984	Open in IMG/M
3300031781\|Ga0318547_10155804	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300031781\|Ga0318547_10244659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1081	Open in IMG/M
3300031793\|Ga0318548_10151602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300031793\|Ga0318548_10445546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300031795\|Ga0318557_10447763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300031819\|Ga0318568_10244490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1111	Open in IMG/M
3300031831\|Ga0318564_10267513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300031845\|Ga0318511_10261208	Not Available	778	Open in IMG/M
3300031846\|Ga0318512_10432412	Not Available	663	Open in IMG/M
3300031859\|Ga0318527_10451494	Not Available	548	Open in IMG/M
3300031860\|Ga0318495_10443400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300031879\|Ga0306919_10011411	All Organisms → cellular organisms → Bacteria	5040	Open in IMG/M
3300031879\|Ga0306919_10432628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1011	Open in IMG/M
3300031890\|Ga0306925_10404210	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300031890\|Ga0306925_10943002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300031893\|Ga0318536_10020684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2981	Open in IMG/M
3300031893\|Ga0318536_10589144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300031897\|Ga0318520_10634119	Not Available	666	Open in IMG/M
3300031910\|Ga0306923_10143664	Not Available	2720	Open in IMG/M
3300031912\|Ga0306921_11106919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	887	Open in IMG/M
3300031945\|Ga0310913_10046082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2832	Open in IMG/M
3300031946\|Ga0310910_10203076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1538	Open in IMG/M
3300031946\|Ga0310910_10300700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas → Methylomonas sp. WSC-6	1262	Open in IMG/M
3300031946\|Ga0310910_11009075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300031954\|Ga0306926_10096489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	3620	Open in IMG/M
3300031959\|Ga0318530_10216564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300031981\|Ga0318531_10135163	All Organisms → cellular organisms → Bacteria → Proteobacteria	1100	Open in IMG/M
3300032035\|Ga0310911_10062039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1976	Open in IMG/M
3300032035\|Ga0310911_10168966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1236	Open in IMG/M
3300032035\|Ga0310911_10200746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1134	Open in IMG/M
3300032039\|Ga0318559_10260384	Not Available	803	Open in IMG/M
3300032039\|Ga0318559_10526004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300032041\|Ga0318549_10332480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300032042\|Ga0318545_10073075	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300032043\|Ga0318556_10242131	Not Available	941	Open in IMG/M
3300032044\|Ga0318558_10189748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1000	Open in IMG/M
3300032052\|Ga0318506_10238216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300032052\|Ga0318506_10350445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300032055\|Ga0318575_10438721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300032059\|Ga0318533_10884286	Not Available	655	Open in IMG/M
3300032063\|Ga0318504_10053533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1704	Open in IMG/M
3300032063\|Ga0318504_10055049	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300032063\|Ga0318504_10506660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300032063\|Ga0318504_10619789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300032076\|Ga0306924_10157536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2601	Open in IMG/M
3300032076\|Ga0306924_11124207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855	Open in IMG/M
3300032076\|Ga0306924_11240443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300032076\|Ga0306924_12640190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300032090\|Ga0318518_10518810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300032091\|Ga0318577_10202965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	948	Open in IMG/M
3300032261\|Ga0306920_102036461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300033290\|Ga0318519_10527032	Not Available	713	Open in IMG/M
3300033290\|Ga0318519_11048331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.19%
Loam	Environmental → Terrestrial → Soil → Loam	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	93.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	63.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066903_1052412351	3300005764	Tropical Forest Soil	MEAPQETSMRVLGWVLAGALALTAPIGVQAGSLGPGWYPMPN
Ga0126384_110891861	3300010046	Tropical Forest Soil	MRVLGWVLAGALALITSIGVQAGSLGPGYHPMPNGWNGDWRRAPS
Ga0126370_116890102	3300010358	Tropical Forest Soil	MRVLGLVLAGALALTTPIAVQAGSLGPSWHPMPNGWNGDWRRAPGLSR
Ga0126381_1029533421	3300010376	Tropical Forest Soil	MRVLGWVLAGVLALTASIGVQAGSLGPGYYPMPNGWNGYWRRAPGPSRQ
Ga0126381_1030753881	3300010376	Tropical Forest Soil	MRVLGLVLAGALALTAPTAVQAASLGPSWYPMPNGWDGDWRRAPHPSHQWNG
Ga0126369_100694844	3300012971	Tropical Forest Soil	MRVLGWVLAGALALITSIGVQAGSLGPGYHPMPNGWN
Ga0126369_128951382	3300012971	Tropical Forest Soil	MRVLGLVLAGALALTAPTAVQAGSLGPGWYPMPNGWNGDWRR
Ga0182036_108518181	3300016270	Soil	MARKPAETYMRVLGLVLAGALALTAPIGVQAGSLGPSWHPMPNGWNRDWRRAPGPSR
Ga0182041_100657101	3300016294	Soil	MRVLGWVLAGALALTVSIGAQAGSLGPSYYPMPNGWNG
Ga0182041_102764034	3300016294	Soil	MRVLGLILAGALALTAPIGVQAGSLGPGYHPMPNGWDGDW
Ga0182041_108757262	3300016294	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASR
Ga0182033_101681412	3300016319	Soil	MRVLGWVLAGALAVTASIGVQAGSLGPGWYPMPNGWDG
Ga0182033_104560572	3300016319	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPSWHPMPNGWNRDWRRAPGPSRQW
Ga0182033_112872802	3300016319	Soil	MRVLGSVLAGALALITSIEVQAGSLGPSYHPMPNGWDGDWRRAPSSSRQ
Ga0182033_113541861	3300016319	Soil	MRVRGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAP
Ga0182035_106567903	3300016341	Soil	MRVLGLILAGALALTAPIGVQAGSLGPGYHPMPNGWDGDWRRVP
Ga0182032_104378022	3300016357	Soil	MRVLGWVLAGALALPASIGVQAGSLVPGWYPMPNGWDGDWRR
Ga0182032_107803061	3300016357	Soil	MRILGLVLSGVLALNATIGVQAGSLGPGWYPMPNGWNGDWRRAPGPSRQWNGGP
Ga0182032_111050881	3300016357	Soil	MARKPAETYMRVLGLVLAGALALTAPIGVQAGSLGPSWHPMPNGW
Ga0182034_113672492	3300016371	Soil	MRVLGLVLAGALALTVPIGVQAGSLGPGSYSMPNGWDGDWRRA
Ga0182040_101288994	3300016387	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWN
Ga0182040_102527144	3300016387	Soil	MRVLGLVLAGALALTAPIGVHAASLGPGSYPMHNGWNGDW
Ga0182040_112438521	3300016387	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAP
Ga0182037_101789731	3300016404	Soil	MRVLGSVLAGALALITSIEVQAGSLGPSYHPMPNGWDGDWRRAPSSSRQW
Ga0182037_107219351	3300016404	Soil	MRVLGLVLAGALVLTASIGVQAGSLGPGYYPMPNGWDG
Ga0182039_111957191	3300016422	Soil	MRILGLILAGALALTASMGVQAGSLGPGWYPMPNGWDGDWRRAPGRSRQWN
Ga0182039_116583911	3300016422	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDW
Ga0182038_109465142	3300016445	Soil	MRVLGLVLAGVLALTAAVGVQAGSLGPGWYLMPNGWDGDWRRTPGPSRQW
Ga0182038_121207261	3300016445	Soil	MRVLGLVLTGALALTAPTAVEAASLGPSWHPMPNGWDSDWRRAPHRS
Ga0210406_106987221	3300021168	Soil	MRVLGLVLSGALALTASIGVQAGSLGPNYYPMPNGWNGD
Ga0126371_116099501	3300021560	Tropical Forest Soil	MRVLGLALAGALALTAPTAVQAASLGPSWYRMPNGWDGQAPHPS
Ga0318516_102278003	3300031543	Soil	MRVLGWVLAGALALTASIGVRAGSLGPGWYPMPNGWDGDWR
Ga0318541_101450183	3300031545	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWR
Ga0318541_102582733	3300031545	Soil	MRVLGLVLSGSLALTAPMAVQAGSLGPSWHPMTNGWN
Ga0318538_106266981	3300031546	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAA
Ga0318538_107694152	3300031546	Soil	MRVLGLVLSGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSRQW
Ga0318528_101052233	3300031561	Soil	MRVLGWVLAGALALTASIGVQAGSLGPGWYPMPNGWDGDWRRAP
Ga0318573_101804613	3300031564	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPGSYSMPNGWDGDWRRATAPT
Ga0318573_105455681	3300031564	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGSYPMPNGWD
Ga0318573_106155431	3300031564	Soil	MRVLGLVLSGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSRQWN
Ga0318515_100558131	3300031572	Soil	MRVRGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQWNGRWVS
Ga0318515_101182091	3300031572	Soil	MRILGLILAGALALTASMGVQAGSLGPGWYPMPNGWDGDWRRAPGRSRQ
Ga0318515_101491941	3300031572	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPSWHPMPNGWNGDWR
Ga0310915_107326302	3300031573	Soil	MRILGLVLSGVLALNATIGVQAGSLGPGWYPMPNGWNGDWRR
Ga0318555_104448672	3300031640	Soil	MRVLGLVLAGALALTASIGVQAGSLGPGYYPMPNGWDG
Ga0318555_107905421	3300031640	Soil	MARKPAETYMRVLGLVLAGALALTAPIGVQAGSLGPSWHPMPNGWNRDWRRA
Ga0318542_100448244	3300031668	Soil	MRVLGWVLGGALALTASIGAQAGSLGPGWYPMPNGWDGDWRLTPGPSR
Ga0318572_102244453	3300031681	Soil	MRVLGWVLGGALALTASIGAQAGSLGPGWYPMPNGWDGDW
Ga0318572_102332352	3300031681	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGW
Ga0318572_102541551	3300031681	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWRRAPAPSHQRNGGPV
Ga0318560_107987431	3300031682	Soil	MRVLGLVLSGSLALTAPMAVQAGSLGPSWHPMTNGWNSDWRRAHGPS
Ga0306917_100561681	3300031719	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQW
Ga0306917_101495223	3300031719	Soil	MRILGLVLVGGLALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPS
Ga0318493_105221082	3300031723	Soil	MRVLGLVLAGVLALTAAVGVQAGSLGPGWYPMPNGWDGDWRRTPGP
Ga0318500_102831841	3300031724	Soil	MRVLGLVLAGALALTASIGVQAGSLGPGYYPMPNGWDGDWRRAPA
Ga0318500_106570431	3300031724	Soil	MRVLGWVLAGALALITSIGVQAGSLGPGYHPMPNGW
Ga0318501_106096802	3300031736	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQWNGR
Ga0318501_107180401	3300031736	Soil	MRVLGLVLSGALALTAPIAVQAGSLGPSWHPMPNGWN
Ga0306918_106648262	3300031744	Soil	MRVLGLVLAGALALTASIGVQAGSLGPGYYPMPNGW
Ga0318502_103630753	3300031747	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAAGASRQWNGGPVSRHWG
Ga0318502_105991391	3300031747	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQWNGRWV
Ga0318492_103760161	3300031748	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWRRAPAPSHQR
Ga0318494_100962783	3300031751	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPVWYPMPNGWNGDWRRAPSRTSP
Ga0318537_102709512	3300031763	Soil	MRVLGLVLAGALVLTAPLGLQAGSLGPGYHPMPNGWNGD
Ga0318535_104213061	3300031764	Soil	MRILGLILAGALALTASMGVQAGSLGPGWYPMPNGWDGDWR
Ga0318509_107468092	3300031768	Soil	MRVLGLILAGALALTAPIGVQAGSLGPGYHPMPNGWDGDWRRVPSP
Ga0318521_103914391	3300031770	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPVWYPMPNGWNGDWRAPS
Ga0318546_100791303	3300031771	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQWNGRW
Ga0318543_102477752	3300031777	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSGQWNGRWVS
Ga0318498_103704391	3300031778	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNG
Ga0318508_10646861	3300031780	Soil	MRVLGLVLVGALALTAPTAVHAGSLGPGSYSMPNGWDGDWR
Ga0318547_101558041	3300031781	Soil	MRVLGSVLAGALALITSIEVQAGSLGPSYHPMPNGWDGDWRRAPSSSRQWNRGPV
Ga0318547_102446592	3300031781	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDW
Ga0318548_101516022	3300031793	Soil	MRVLGWVLAGALALTVSIGAQAGSLGPSYYPMPNGWNGDWH
Ga0318548_104455462	3300031793	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPGSYSMPNGWDG
Ga0318557_104477631	3300031795	Soil	MRVLGLVLAGALALTVPIGVQAGSLGPGSYSMPNGW
Ga0318568_102444901	3300031819	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWRRAPAPSHQ
Ga0318564_102675131	3300031831	Soil	MRVLGLVLAGALALTASIGVQAGSLGPGWYPMPNGWD
Ga0318511_102612081	3300031845	Soil	MRILGLILAGALALTASMGVQAGSLGPGWYPMPNGWD
Ga0318512_104324122	3300031846	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAP
Ga0318527_104514942	3300031859	Soil	MRILGLILAGALALTASMGVQAGSLGSGWYPMPNGWDGD
Ga0318495_104434002	3300031860	Soil	MRVLGLVLAGALALTASIGVQAGSLGPGYYPMPNG
Ga0306919_100114111	3300031879	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWD
Ga0306919_104326281	3300031879	Soil	MRVLGLVLSGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPS
Ga0306925_104042101	3300031890	Soil	MRVLGLVLAGALVLTAPLGLQAGSLGPGYHPMPNGWNGDSRRVP
Ga0306925_109430021	3300031890	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGSYPMPNGWDGDWRRAPAPTRQWNGG
Ga0318536_100206841	3300031893	Soil	MRVLGLILAGALALTAPIGVQAGSLGPGYHPMPNGWDGDWRRVPSPSPQWNGG
Ga0318536_105891441	3300031893	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQWNGGP
Ga0318520_106341192	3300031897	Soil	MRILGLILAGALALTASIGAQAGSLGPGWSPMPNGWDGD
Ga0306923_101436643	3300031910	Soil	MRVLGWIFAGALALTAPTAVQAGSLGPGWYPMPNG
Ga0306921_111069192	3300031912	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPVWYPMPNGWNGDWRRAPSP
Ga0310913_100460821	3300031945	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPGSYSMPNGWDGDWR
Ga0310910_102030764	3300031946	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAPGASRQW
Ga0310910_103007003	3300031946	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRA
Ga0310910_110090751	3300031946	Soil	MRVLGLVLAGALALTAPIGVHAGSLGPGSYPMPNGWNGDWRQAPSPSRQWNG
Ga0306926_1009648910	3300031954	Soil	MRVLGLVLAGALVLTAPIVLQAGSLGPGWYPMPDGWDDDWRRAAGASR
Ga0318530_102165641	3300031959	Soil	MRVLGWVLAGALALTAPTAVHAGSLGPGSYSMPNGWDGDWRRASA
Ga0318531_101351631	3300031981	Soil	MRVLGLVLAGALALTVPIGVQAGSLGPGSYSMPNGWDGDWRRATAPS
Ga0310911_100620394	3300032035	Soil	MARKPAETYMRVLGLVLAGALALTAPIGVQAGSLGPSWHPMPNGWNRDW
Ga0310911_101689661	3300032035	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPGSYSMPNGWDGDWRRATAPSHQRS
Ga0310911_102007461	3300032035	Soil	MRVLGLVLVGALALTAPTAVHAGSLGPGSYSMPNGWDGDWHRAPGP
Ga0318559_102603841	3300032039	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPSRQWNG
Ga0318559_105260041	3300032039	Soil	MRFLGLVLAGALALTATTAVQARSLGPGSYPMPNGWDGDWRRAPA
Ga0318549_103324801	3300032041	Soil	MRVLGLVLAGALALTAPIGVQAGSLGPVWYPMPNGWNG
Ga0318545_100730753	3300032042	Soil	MRVLGLVLAGALALTASIGVQAGSLGPGYYPMPNGWDGDWRRAPS
Ga0318556_102421311	3300032043	Soil	MRVLGWVLAGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPGPS
Ga0318558_101897483	3300032044	Soil	MRVLGWVLAGALALTAPIGVQAASLGPGSYSMPNGWDGDWRRAP
Ga0318506_102382162	3300032052	Soil	MRVLGLVLSGALALTAPIAVQAGSLGPSWHPMPNGWNGDWRRAPG
Ga0318506_103504452	3300032052	Soil	MRVLGLVLAGALALTAPIGGYAGSLGPGSYSMPNGWDGDWRRAPGPSRQWNGGPV
Ga0318575_104387211	3300032055	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGYYPMPNGWNGDWRRLPGPSHQWNGGQ
Ga0318533_108842862	3300032059	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGWYPMPNGWDGDWR
Ga0318504_100535331	3300032063	Soil	MRVLGWVLAGALALTVSIGAQAGSLGPSYYPMPNGWNGDWHRAPGPSHQWNGGPV
Ga0318504_100550491	3300032063	Soil	MRVLGLVLAGALALTASIGVQAGSLGPGYYPMPNGWNGDWRRAPAPSRQWNGRW
Ga0318504_105066601	3300032063	Soil	MRVLGLVLSGALALTAPIAVQAGSLGPSWHPMPNGWNGDWR
Ga0318504_106197891	3300032063	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGYYPMPNGW
Ga0306924_101575365	3300032076	Soil	MRFLGLVLAGALALTATTAVQAGSLGPGSYPMPNGWDGDWRRAPAPTRQW
Ga0306924_111242072	3300032076	Soil	MRVLGWVLAGALALTASIAVQAGSLGPGYYPMPNGWNG
Ga0306924_112404433	3300032076	Soil	MRVLGLVLAGALALTAPTAVQAASLGPRWYPMPNGWNGDWRRAPHPAH
Ga0306924_126401901	3300032076	Soil	MRVLGWVLAGALALTASIGVRAGSLGPGWYPMPNGWDGDWRRAP
Ga0318518_105188101	3300032090	Soil	MRVLGLVLAGALALTAPIGVHAGSLGPGSYPMPNGWNGDWRQAPSPSRQWNGGP
Ga0318577_102029653	3300032091	Soil	MRVLGLVLAGVLALTAAVGVQAGSLGPGWYLMPNGWDGDWRRTPGPSRQ
Ga0306920_1020364611	3300032261	Soil	MRVLGLVLAGALALTAPTGVHAGSLGPGSYSMPNGWNGDWRRAPGPSRQWNGGPV
Ga0318519_105270321	3300033290	Soil	MRVLGWVLGGALALTASIGAQAGSLGPGWYPMPNGWDGDWRRTPG
Ga0318519_110483312	3300033290	Soil	MRVLGLVLAGALALTASIGVQAGSLGPGYYPMPNGWNGDWHRTPGVSRDRVPNGCPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068334

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences