Metagenome / Metatranscriptome Family F068336

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068336
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	84 residues
Representative Sequence	IDPNLTTALMGRKGVFVSAPATKVGIFGITDETGPTTLLGLSEVLEGGVFPPVAPWPRASFSNLFNDSVVVPTRFLPTPSPNFLP
Number of Associated Samples	89
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.81 %
% of genes near scaffold ends (potentially truncated)	95.16 %
% of genes from short scaffolds (< 2000 bps)	95.97 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (86.290 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.161 % of family members)
Environment Ontology (ENVO)	Unclassified (52.419 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.065 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF03567	Sulfotransfer_2	2.42
PF07484	Collar	1.61
PF14023	DUF4239	1.61
PF01135	PCMT	0.81
PF04073	tRNA_edit	0.81
PF11149	DUF2924	0.81
PF05683	Fumerase_C	0.81
PF13469	Sulfotransfer_3	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	0.81
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.81
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.81
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
All Organisms	root	All Organisms	13.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
cellular organisms	root	All Organisms → cellular organisms	13.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.61 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.61 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.81 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.81 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004100\|Ga0058904_1360391	Not Available	599	Open in IMG/M
3300004631\|Ga0058899_10238875	Not Available	1154	Open in IMG/M
3300005332\|Ga0066388_102799538	Not Available	891	Open in IMG/M
3300005332\|Ga0066388_104135979	Not Available	740	Open in IMG/M
3300005363\|Ga0008090_15630998	Not Available	530	Open in IMG/M
3300005764\|Ga0066903_104670783	Not Available	729	Open in IMG/M
3300005764\|Ga0066903_108062686	Not Available	540	Open in IMG/M
3300010046\|Ga0126384_10339991	Not Available	1247	Open in IMG/M
3300010048\|Ga0126373_12624891	Not Available	562	Open in IMG/M
3300010048\|Ga0126373_12653496	Not Available	559	Open in IMG/M
3300010048\|Ga0126373_12837309	Not Available	541	Open in IMG/M
3300010361\|Ga0126378_11674629	Not Available	723	Open in IMG/M
3300010361\|Ga0126378_12487517	Not Available	591	Open in IMG/M
3300010376\|Ga0126381_100833408	Not Available	1325	Open in IMG/M
3300010376\|Ga0126381_101259597	Not Available	1069	Open in IMG/M
3300010376\|Ga0126381_101785491	Not Available	888	Open in IMG/M
3300010376\|Ga0126381_102099005	Not Available	814	Open in IMG/M
3300010376\|Ga0126381_102202044	Not Available	793	Open in IMG/M
3300010376\|Ga0126381_102377313	Not Available	760	Open in IMG/M
3300010376\|Ga0126381_102606893	Not Available	723	Open in IMG/M
3300010398\|Ga0126383_11594594	Not Available	742	Open in IMG/M
3300010398\|Ga0126383_12666081	Not Available	583	Open in IMG/M
3300010398\|Ga0126383_12852842	Not Available	564	Open in IMG/M
3300011120\|Ga0150983_11716501	Not Available	901	Open in IMG/M
3300016270\|Ga0182036_10774829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300016294\|Ga0182041_10923787	Not Available	786	Open in IMG/M
3300016294\|Ga0182041_11152699	Not Available	706	Open in IMG/M
3300016294\|Ga0182041_11419768	Not Available	637	Open in IMG/M
3300016319\|Ga0182033_10008305	All Organisms → cellular organisms → Bacteria	5711	Open in IMG/M
3300016319\|Ga0182033_10138481	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300016341\|Ga0182035_11416103	Not Available	624	Open in IMG/M
3300016357\|Ga0182032_10549833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	955	Open in IMG/M
3300016357\|Ga0182032_10970552	Not Available	725	Open in IMG/M
3300016357\|Ga0182032_11382868	Not Available	609	Open in IMG/M
3300016371\|Ga0182034_10446438	Not Available	1070	Open in IMG/M
3300016371\|Ga0182034_11955064	Not Available	518	Open in IMG/M
3300016387\|Ga0182040_10026967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	3299	Open in IMG/M
3300016387\|Ga0182040_11227338	Not Available	631	Open in IMG/M
3300016404\|Ga0182037_10275899	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300016404\|Ga0182037_10303167	Not Available	1285	Open in IMG/M
3300016404\|Ga0182037_10356123	Not Available	1194	Open in IMG/M
3300016445\|Ga0182038_10198973	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300020580\|Ga0210403_10726356	Not Available	794	Open in IMG/M
3300020581\|Ga0210399_10472791	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300020581\|Ga0210399_10736083	Not Available	809	Open in IMG/M
3300020583\|Ga0210401_11543524	Not Available	521	Open in IMG/M
3300021178\|Ga0210408_11410708	Not Available	524	Open in IMG/M
3300021181\|Ga0210388_11563865	Not Available	549	Open in IMG/M
3300021403\|Ga0210397_11598887	Not Available	506	Open in IMG/M
3300021404\|Ga0210389_10432888	Not Available	1035	Open in IMG/M
3300021405\|Ga0210387_10705702	Not Available	894	Open in IMG/M
3300021407\|Ga0210383_11756715	Not Available	507	Open in IMG/M
3300021560\|Ga0126371_10710197	Not Available	1153	Open in IMG/M
3300021560\|Ga0126371_11764001	Not Available	741	Open in IMG/M
3300021560\|Ga0126371_11859780	Not Available	722	Open in IMG/M
3300021560\|Ga0126371_12282494	Not Available	654	Open in IMG/M
3300021560\|Ga0126371_13241321	Not Available	550	Open in IMG/M
3300022523\|Ga0242663_1093950	Not Available	590	Open in IMG/M
3300022525\|Ga0242656_1097712	Not Available	572	Open in IMG/M
3300022533\|Ga0242662_10037699	Not Available	1197	Open in IMG/M
3300022724\|Ga0242665_10031107	Not Available	1313	Open in IMG/M
3300022726\|Ga0242654_10115279	Not Available	861	Open in IMG/M
3300030531\|Ga0210274_1090013	Not Available	1366	Open in IMG/M
3300030969\|Ga0075394_11817366	Not Available	691	Open in IMG/M
3300031057\|Ga0170834_108596890	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300031128\|Ga0170823_16382734	Not Available	524	Open in IMG/M
3300031231\|Ga0170824_100832288	Not Available	576	Open in IMG/M
3300031446\|Ga0170820_12668801	Not Available	660	Open in IMG/M
3300031469\|Ga0170819_15132970	Not Available	503	Open in IMG/M
3300031545\|Ga0318541_10343006	Not Available	834	Open in IMG/M
3300031546\|Ga0318538_10227443	Not Available	1000	Open in IMG/M
3300031561\|Ga0318528_10170117	Not Available	1163	Open in IMG/M
3300031573\|Ga0310915_11164979	Not Available	534	Open in IMG/M
3300031668\|Ga0318542_10288085	Not Available	839	Open in IMG/M
3300031681\|Ga0318572_10171883	Not Available	1258	Open in IMG/M
3300031682\|Ga0318560_10493922	Not Available	663	Open in IMG/M
3300031724\|Ga0318500_10462375	Not Available	635	Open in IMG/M
3300031736\|Ga0318501_10660034	Not Available	576	Open in IMG/M
3300031747\|Ga0318502_10776891	Not Available	580	Open in IMG/M
3300031754\|Ga0307475_10731481	Not Available	788	Open in IMG/M
3300031765\|Ga0318554_10628641	Not Available	604	Open in IMG/M
3300031768\|Ga0318509_10531708	Not Available	656	Open in IMG/M
3300031770\|Ga0318521_10181582	Not Available	1208	Open in IMG/M
3300031770\|Ga0318521_10451355	Not Available	770	Open in IMG/M
3300031777\|Ga0318543_10112212	Not Available	1179	Open in IMG/M
3300031793\|Ga0318548_10540703	Not Available	568	Open in IMG/M
3300031795\|Ga0318557_10416519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	618	Open in IMG/M
3300031798\|Ga0318523_10049882	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300031798\|Ga0318523_10587760	Not Available	548	Open in IMG/M
3300031805\|Ga0318497_10650586	Not Available	591	Open in IMG/M
3300031819\|Ga0318568_10986338	Not Available	520	Open in IMG/M
3300031821\|Ga0318567_10345042	Not Available	841	Open in IMG/M
3300031821\|Ga0318567_10357714	Not Available	826	Open in IMG/M
3300031823\|Ga0307478_11026213	Not Available	689	Open in IMG/M
3300031833\|Ga0310917_10281605	Not Available	1122	Open in IMG/M
3300031879\|Ga0306919_10388162	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300031879\|Ga0306919_11505144	Not Available	507	Open in IMG/M
3300031880\|Ga0318544_10192827	Not Available	786	Open in IMG/M
3300031890\|Ga0306925_11436440	Not Available	678	Open in IMG/M
3300031897\|Ga0318520_11094822	Not Available	505	Open in IMG/M
3300031912\|Ga0306921_10195884	Not Available	2368	Open in IMG/M
3300031912\|Ga0306921_12536108	Not Available	531	Open in IMG/M
3300031942\|Ga0310916_10869264	Not Available	757	Open in IMG/M
3300031947\|Ga0310909_10159806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1857	Open in IMG/M
3300031954\|Ga0306926_10298789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1993	Open in IMG/M
3300031962\|Ga0307479_11088589	Not Available	766	Open in IMG/M
3300032001\|Ga0306922_11443697	Not Available	690	Open in IMG/M
3300032025\|Ga0318507_10030856	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300032025\|Ga0318507_10390274	Not Available	606	Open in IMG/M
3300032041\|Ga0318549_10183857	Not Available	936	Open in IMG/M
3300032059\|Ga0318533_10002857	All Organisms → cellular organisms → Bacteria	9253	Open in IMG/M
3300032064\|Ga0318510_10115780	Not Available	1033	Open in IMG/M
3300032065\|Ga0318513_10514917	Not Available	586	Open in IMG/M
3300032068\|Ga0318553_10207599	Not Available	1021	Open in IMG/M
3300032076\|Ga0306924_10600190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1246	Open in IMG/M
3300032094\|Ga0318540_10601036	Not Available	530	Open in IMG/M
3300032174\|Ga0307470_11001607	Not Available	665	Open in IMG/M
3300032174\|Ga0307470_11614759	Not Available	543	Open in IMG/M
3300032205\|Ga0307472_100460388	Not Available	1084	Open in IMG/M
3300032205\|Ga0307472_102774195	Not Available	501	Open in IMG/M
3300032261\|Ga0306920_101518111	Not Available	956	Open in IMG/M
3300033289\|Ga0310914_11380585	Not Available	607	Open in IMG/M
3300033290\|Ga0318519_10425682	Not Available	793	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.35%
Loam	Environmental → Terrestrial → Soil → Loam	5.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	76.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.65%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.42%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030531	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058904_13603911	3300004100	Forest Soil	ICWEEIPIDMINGSLTTATMGRKGVFVSAPATKVGVFGIQDDVGPTTLLGLSEVLEGGVFPPVAPWPRASFTNLFNSSVPVPTHFLPTPSPNFLP*
Ga0058899_102388751	3300004631	Forest Soil	DLTTTQMGRKGVFVSAPAVDVTGAPVTLLGLSEVFEGGTFPPTAAWPRASFTGLFNSSNPIPTRFVPTPSPNFLP*
Ga0066388_1027995381	3300005332	Tropical Forest Soil	NPALTTTLMGRKGVFVSAPATKVGIFGITDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVPVATRFLPAPSSIFLP*
Ga0066388_1041359791	3300005332	Tropical Forest Soil	IGNENQLSTSTEFICWEEIFITDIDNNLNTTVMGRKGVFASAAAEKVGIFGIADVSGPTTLLGLSEFVEYSAATSAEYPLRASYYTLFNDSVVVPSKFKPTPSPIFLP*
Ga0008090_156309981	3300005363	Tropical Rainforest Soil	LTTTLMGRKEVFVSDQAKKVGIFGIPDNTGPTTLLGLSEVREGSPGPTRAYFSNLFNSSRPVPTKFLPEPSPNFLP*
Ga0066903_1046707831	3300005764	Tropical Forest Soil	KGVFVSAPAEKVGIFGITDEIGPTTLLGLSETLEGGVFPPVAPWPRASFSNLFNSSVSVSSRFLPTPSPNFLP*
Ga0066903_1080626861	3300005764	Tropical Forest Soil	TDIDKNLNTAVMGRKGVFASAAAEKVGIFGIQDETGPVTLLGLSETLEGGVFPPVAPWPRASYYTLFNDSVVVPTRFLPTPSPIFLP*
Ga0126384_103399911	3300010046	Tropical Forest Soil	GRKGVFASAAAQKVGIFGIQDETGPTTLLGLSETLEGPLPTAPWSRASYYTLLNDSVVVPTRFLPTPSPIFLP*
Ga0126373_126248911	3300010048	Tropical Forest Soil	STEFICWEEVALTDINANLITTQMGRKGVFVSAPAEKVGIFGITDEIGPTTLLGLSETLEGGVFPPVAPWPRASFSNLFNSSVSVSSRFLQTPSPNFLP*
Ga0126373_126534961	3300010048	Tropical Forest Soil	NLVTTVMGRKGVFASAPAEKVGIFGIQDETGPTTLLGLSETLEDPFPTAPWSRASYYALFNDSVVVPTRFLPTPPIFLP*
Ga0126373_128373092	3300010048	Tropical Forest Soil	AAAEKVGIFGITDASGPTTLLGLSEYVEYSPPTTSATNPLRASYYTLFNDSVVVPTKFKPTPSPIFLP*
Ga0126378_116746292	3300010361	Tropical Forest Soil	GRKGVFVSAPATKVGIFGITDETGPTTLLGLSEVLEGGVFPPTAPWPRASFSNLFNDSVVVPTRFLPTPSPNFLP*
Ga0126378_124875171	3300010361	Tropical Forest Soil	ITSINPDLTTTLMGRKGVFVSAPATKVGIFGITDETGPTTLLGLAESQEGGVFPPVAPWPRASFSNLFNSSVPVATRFLPAPSSIFLP*
Ga0126381_1008334082	3300010376	Tropical Forest Soil	ISLTNINPSLTTAAMGRKGVFVSAPAVKVGIHGITDDTGPTTLLGLSEVLEGGTFPPTSPWPRASFTGLFNSSVPVPTHFLPTPSPNFLP*
Ga0126381_1012595972	3300010376	Tropical Forest Soil	STATEFICWEEIPITQIDPNLTTALMGRKGVFVSAPATKVGIFGITDETGPTTLLGLSEVLEGGVFPPTAPWPRASFSNLFNDSVVVPTRFRPTPSPNFLP*
Ga0126381_1017854911	3300010376	Tropical Forest Soil	FLTDIDPGLVTTVMGRKGVFASAAAEKVGIFGITDEAGPVTLLGLSEYVEYSPPTTSAQNPLRASYYTLFNDSVVVPTRFRPTPSPIFLP*
Ga0126381_1020990051	3300010376	Tropical Forest Soil	EFFLTDIDPGLTTAQMGRKGVFVSAPAVKVGIHGIQDDVGPTTLLGLSEVQEGAGETRASFSNLFNSSVPVPTHFLPTPSPNFLP*
Ga0126381_1022020442	3300010376	Tropical Forest Soil	FVSAPATKVGIHGIMDETGPTTLLGLSEVLEGGTFPPTAPWPRASFTSLFNSSVGVPTRFLPTPSPNFLP*
Ga0126381_1023773132	3300010376	Tropical Forest Soil	AQMGRKGVFVSAPARKVGIFGIQDAAGPVTLLGLSEVLEGGVFPPEAPWPRASFTGLFNSSNPVLGPPVPHFTPTRSPQLLP*
Ga0126381_1026068932	3300010376	Tropical Forest Soil	EFICWEEIFLTDIDPNLVTTVMGRKGVFASAPAEKVGIFGIQDETGPTTLLGLSETLEGPLPTAPWSRASYYALFNDSVVVPTRFLPTPPIFLP*
Ga0126383_115945941	3300010398	Tropical Forest Soil	VMGRKGVFTSGPAEKVGIFGIQDDTGPTTLLGLSESFEGPLPTAPWTRVTYYTLFNDSVAVPTRFRPPRQ*
Ga0126383_126660811	3300010398	Tropical Forest Soil	LSTSTEFICWEEIYLTDIDPNLVTTVMGRKGVFASAAAEKVGIFGIADVSGPTTLLGLSEFVEYSAATSAEYPLRASYYTLFNDSVVVPSKFKPTPSPIFLP*
Ga0126383_128528421	3300010398	Tropical Forest Soil	IDPNLTTALMGRKGVFVSAPATKVGIFGITDETGPTTLLGLSEVLEGGVFPPVAPWPRASFSNLFNDSVVVPTRFLPTPSPNFLP*
Ga0150983_117165012	3300011120	Forest Soil	VTTQMGRKGVFVSAPAVDANGNLVTLLGLSEVLEGGFFPPIAAWPRASFTGLFNSSNPVPTRFVPTPSPNFLQ*
Ga0182036_107748292	3300016270	Soil	RINANLITAVMGRKGVFTSGPAEKVGIFGIQDDTGPTTLLGLSETLEGPLPTAPWARATYYTLFNDSVTVPTRFRPSRQ
Ga0182041_109237871	3300016294	Soil	TEFICWEEIPITSINPNLTTTLMGRKGVFVSAPAKKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVAVPTHFLPTPSPNFLP
Ga0182041_111526991	3300016294	Soil	EEIAITQIDPNLTTALMGRKGVFVSAPATKVGIFGITDETGPTTLLGLAETLEGSAAAPSARVSFSNLFNDSVAVPTRFLPTPSPNFLP
Ga0182041_114197681	3300016294	Soil	WEEISIDRINANLITAVMGRKGVFTSGPAEKVGIFGIQDDTGPTTLLGLSESFEGPLPTAPWTRVTYYTLFNDSVAVPTRFRPSRQ
Ga0182033_100083057	3300016319	Soil	WEEIPITSINPDLTTTVMGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETLEGPAAAPTARVSFSNLFNSSVPVPTKFLPTPSPIFLP
Ga0182033_101384813	3300016319	Soil	RKGVFASGPAEKVQIFGITDESGPTTLLGLSETLEGPFPTAPWSRASYYTLLNDSVVVPTRFLPTPPIFLP
Ga0182035_114161031	3300016341	Soil	TDIDPNLVTTVMGRKGVFASGPAEKVQIFGITDESGPTTLLGLSETLEGPFPTAPWSRASYYTLLNDSVVVPTRFLPTPPIFLP
Ga0182032_105498331	3300016357	Soil	IGNENQLSTTTEFICWEEIAIDRIDPNLTAAFMGKEGVVVSAQAKKVGIFGITDETGPTTLLGLSEVLEGGTFPSAPTLPGPWPRATFSGLFNSSVPSPTRFLPTP
Ga0182032_109705521	3300016357	Soil	NLVTTVMGRKGVFASGPAEKVQIFGITDESGPTTLLGLSETLEGPFPTAPWSRASYYTLLNDSVVVPTRFLPTPPIFLP
Ga0182032_113828681	3300016357	Soil	TRINSDLTTRLMGRKGVFVSAPATKVGIFGIQDETGPTTLLGLSETLEGGVFPPTAPWPRASFSNLFNSSVAAPTHFLPTRSPNFLP
Ga0182034_104464381	3300016371	Soil	ICWEEVALTDIYPELTTRLMGRKGVMVSAQATKVQIFGISDESGPATLLLSETLEGPATAPWPRASFGRLFNSSVPAPTHFLPTPLPILLP
Ga0182034_119550641	3300016371	Soil	IGNENQLSTSTEFICWEEIFLTDIDPNLVTTVMGRKGVFASGPAEKVQIFGITDESGPTTLLGLSETLEGPFPTAPWSRASYYTLLNDSVVVPTRFLPTPPIFLP
Ga0182040_100269674	3300016387	Soil	AGGDLTTALMGREGVFASTNASKVGIFGITDEIGPTTLLGLAETLEGGVFPPTAPWPRVSFTGLFNSSVPVPTHFLPSP
Ga0182040_112273381	3300016387	Soil	EVALTDINANLITTQMGRKGVFVSAPAEKVGIFGITDEIGPTTLLGLSETLEGGVFPPVVPWPRASFSNLFNSSVSVSSRFLPTPSPNFLP
Ga0182037_102758991	3300016404	Soil	DIDPNLVTTVMGRKGVFASGPAEKVQIFGITDESGPTTLLGLSETLEGPFPTAPWSRASYYTLLNDSVVVPTRFLPTPPIFLP
Ga0182037_103031671	3300016404	Soil	IDRINANLITADMGRKGVFTSGPAEKVGIFGIQDDTGPTTLLGLSETLEGPLPTAPWARATYYTLFNDSVAVPTRFRPSRQ
Ga0182037_103561231	3300016404	Soil	GVFASTNVAKVGIFGITDETGPTTLLGLSETLEGGVFPPTAPWPRTSFTGLFNSSVPVPTRFLPSN
Ga0182038_101989734	3300016445	Soil	AIGNENQLSTSTEFICWEEIPVDAINAELTTTLMGRKGVFVSAPATKTGIFGIQDQTGPTTLLGLSETQENWGGRVSFSNLFNSSVAVPTHFLPTPSPNFLP
Ga0210403_107263561	3300020580	Soil	PDLTTTVMGRKGVFVSAPATKVGIFGIQDDTGPTTLLGLAETQENYGGRVSFSNLFNSSVAVPTHFLPTPSPNFLP
Ga0210399_104727912	3300020581	Soil	TTVMGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETQEGPAAAPTARVSFSNLFNSSVPVPTRFLPTPSPNFLP
Ga0210399_107360832	3300020581	Soil	FVSAPATKVQIFGITDESGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVPVATRFLPTPSPIFLP
Ga0210401_115435242	3300020583	Soil	RKGVFVSAPAVKVGIHGITDDTGPTTLLGLSEVLEGGTFPALGAPWPRASFTGLFNSSVPVPTHFLPTPSPNFLP
Ga0210408_114107081	3300021178	Soil	ENQLSTTTEFICWAEVAIDQIDPNLTTTLMGTEGMVVSDQAKKVGIFGISDETGPTTLLGLSEVLEGGTFPSAPTSPGPWPRASFNGLFNSSVPAPTRFLPTP
Ga0210388_115638651	3300021181	Soil	EFICWEEIPITAINAGLTTAQMGRKGVFVSAPAVKVGLNGIMDETGPTTLLGLSEVLEGGVFPALGAPWPRASFTSLFNSSVGVPTHFLPTPSPNFLP
Ga0210397_115988871	3300021403	Soil	TAAFMGKEGVVVSAQAKKVQIFGITDESGPTTLLGLSEVLEGGTFPSAPTSPGPWPRASFSGLLNGSIPAPTRFLPTP
Ga0210389_104328881	3300021404	Soil	IPITSINPDLTTTLMGRKGVFVSAPATKVQIFGITDESGPTTLLGLSETQENFGTRVSFSNLFNSSVAVPTHFLPTPSPNFLP
Ga0210387_107057022	3300021405	Soil	ICWAEIRLYDISENLTTTVMGRKGVFVSAPATKVGIFGITDETGPTTLLGLSETQEGTVPAFPARESISGLFNSSVPVPTHFLPTPSPNFLP
Ga0210383_117567151	3300021407	Soil	EFICWAEIRLYDISENLTTTVMGRKGVFVSAPATKVGIFGITDDTGPTTLLGLSETQEGTVPAFPARESISGLFNSSVPVPTHFLPTPSPNFLP
Ga0126371_107101972	3300021560	Tropical Forest Soil	EEIPITQIDPNLTTALMGRKGVFVSAPATKVGIFGITDETGPTTLLGLAETLEGSAVAPSARVSFSNLFNSSVAVPTRFLPTPSPNFLP
Ga0126371_117640011	3300021560	Tropical Forest Soil	ICWEEIVLTDIDPALTTATMGRNGVFVSAPAMKAGIHGIQDDVGPTTLLGLSSFGEAGGARTSFTGLFNSSVPVPTHFLPTPSPNFLP
Ga0126371_118597802	3300021560	Tropical Forest Soil	SSGPAEKVGIFGIQDDTGPTTLLGLSETFEGPLPTAPWTRVTYYTLFNDSVAVPTRFRPPRQ
Ga0126371_122824942	3300021560	Tropical Forest Soil	TTTLMGRKGVFVSAPAEKVGIFGITDATGPTTLLGLAETLEGGGEPGWAPRVSFSNLFNSSVPVATRFLPTPSSIFLP
Ga0126371_132413211	3300021560	Tropical Forest Soil	EEIPITQIDPNLTTALMGRKGVFVSAPATKVGIFGITDETGPTTLLGLSEVLEGGVFPPTAPWPRASFSNLFNDSVVVPTRFLPTPSPNFLP
Ga0242652_10025252	3300022510	Soil	FVSDQAEKVQHAGISDASGNVTLLGLAEFLEGGTFPPTASWPRASFTGLFNSSVPVPTRFLPAPSSIFFP
Ga0242663_10939502	3300022523	Soil	STEFICWAEIRLYDIIENLTSTVMGRKGVFVSAPATKVGIFGITDATGPTTLLGLSETQEGTVPAFPARESISGLFNSSVPVPTHFLPTPSPNFLP
Ga0242656_10977121	3300022525	Soil	MGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETQEGPAAAPTARVSFSNLFNSSVPVPTRFLPTPSPNFLP
Ga0242662_100376991	3300022533	Soil	FMGRKGVFVSDQAEKVQHAGISDASGNVTLLGLAEFLEGGTFPPTASWPRASFTGLFNSSVPVPTRFLPAPSSIFFP
Ga0242665_100311071	3300022724	Soil	FICWEEIPIEVIDSNLTTTLMGRKGVFASAPATKVGIFGIQDDTGPTTLLGLSEVREGNPATPTRAYFSNLFNSSKPVPTKFLPTPSPNFLP
Ga0242654_101152793	3300022726	Soil	GVFVSAQAAKVQHSGISDASGPVTLLGLSEVLEGGTFPPKAAWPRASFTGLFNSSVPVPTHFLPTPSPNFLP
Ga0210274_10900132	3300030531	Soil	TTMGRKGVFVSAPAVDVTGAPVTLLGLSEVFEGGFFPGNYPSAAWPRASFTGLFNSSNPVPTHFVPTPSPNFLQ
Ga0075394_118173661	3300030969	Soil	LSTSTEFICWEEISILDINRGLTTTQMGRKGVFVSAPAMKQGIFGIMDDVGPTTLLGLSETLEGNTTNPWPRASFSNLFNSSVFVATHFLPTPSPNFFQ
Ga0170834_1085968902	3300031057	Forest Soil	AAFMGREGVFVSAPAKKVQIFGITDESGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVPAPTRFLPTP
Ga0170823_163827341	3300031128	Forest Soil	WEEVTLTSINAGLTTTNMGRKGVFVSNQAAKVQISGITDGSGPVPLLGLAEVLEGGVFPPTASWPRAAFTGLFNSSVPVNSRFLPAPSSIFFP
Ga0170824_1008322882	3300031231	Forest Soil	FICWEEVAIDVINSGLTTAQMGRKGVFVSAPAVKVGIHGIMDETGPTTLLGLSEVLEGGVFPPTASWPRASFTNLFNSSVPVPTRFLPTPGPNFF
Ga0170820_126688012	3300031446	Forest Soil	LTTTNMGRKGVFVSNQAAKVQISGITDGSGPVPLLVLSEVLEGGPHQPADPWPRASFTGLFNSSVPVPSHFLPAPSSIFFP
Ga0170819_151329701	3300031469	Forest Soil	AFTEFICWEEVSITSINAALTTANMGRKGVFVSDQAEKVQHSGITDGSGPVTLLGLAEVLEGGVFPPVASWPRAYFTSLFNSSVPVPTRFLPAPSSIFFP
Ga0318541_103430061	3300031545	Soil	WEEIPITSINPNLTTTLMGRKGVFVSAPAKKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVAVPTHFLPTPSPNFLP
Ga0318538_102274431	3300031546	Soil	KGVFVSAPATKVGIFGISDETGPTTLLGLAETQENYGGRVSFSNLFNSSVAVPTRFLPTPSPNFLP
Ga0318528_101701173	3300031561	Soil	VAAPAKKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVAVPTHFLPTPSPNFLP
Ga0310915_111649791	3300031573	Soil	EFICWAEVPITSINPDLTTTLMGRKGVFVSGPATKVQIFGITDESGPTTLLGLSETQEGGGEPGWAPRVSFSNLFNSSVPVATRFLPTPSPIFLP
Ga0318542_102880852	3300031668	Soil	EEIPITSINPNLTTTVMGRKGVFVSAPATKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVPVPTRFLPAPSSIFLP
Ga0318572_101718833	3300031681	Soil	AIDQIDPNLTTTFMGREGMVVSDQATKVGIFGISDRTGPTTLLGLSEVLEGGTFPSAPTSPGPWPRASFSGLFNSSVPAPMRFLPTP
Ga0318560_104939221	3300031682	Soil	EAINPDLTTTLMGRKGVFVSAPATKVGIFGVQDDTGPTTLLGLSEVREGSPAAPTRAYFGNLFNSSRPVPTRFVPTPSPNFLP
Ga0318500_104623752	3300031724	Soil	NIGNENQLSTSTEFICWEEIAVDSINPDLTTTVMGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETQENYGGRVSFSNLFNSSVAVPTRFLPTPSPNFLP
Ga0318501_106600341	3300031736	Soil	TSTEFICWEEVPLAAISTDLTTAVMGRKGVFLSDQAVKVALPGITDTTGPVTLLGLSEFLEGGVFPPTAPWPRASFTGLFNSSVPVPTTFVPN
Ga0318502_107768911	3300031747	Soil	PNLTTTVMGRKGVFVSAPATKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVPVPTRFLPAPSSIFLP
Ga0307475_107314812	3300031754	Hardwood Forest Soil	TDLVTTQMGRKGVFVSAPAVDVTGAPVTLLGLSEVFEGGTFPPTAAWPRASFTGLFNSSNPVPTRFVPTPSPNFLQ
Ga0318554_106286411	3300031765	Soil	TDIYPELATRLMGRKGVMVSAQATKVQIFGISDESGPATLLLSETLEGPATAPWPRASFGRLFNSSVPAPTHFLPTPLPILLP
Ga0318509_105317082	3300031768	Soil	MGRKGVFVSAPATKVGIFGVQDDTGPTTLLGLSEVREGSPAAPTRAYFGNLFNSSRPVPTRFVPTPSPNFLP
Ga0318521_101815821	3300031770	Soil	AELTTTLMGRKGVFVSAPATKTGIFGIQDQTGPTTLLGLSETQENWGGRVSFSNLFNSSVAVPTHFLPTPSPNFLP
Ga0318521_104513551	3300031770	Soil	VFVSAPAKKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVAVPTHFLPTPSPNFLP
Ga0318543_101122121	3300031777	Soil	PNLTTTFMGREGMVVSDQATKVGIFGISDRTGPTTLLGLSEVLEGGTFPSAPTSPGPWPRASFSGLFNSSVPAPMRFLPTP
Ga0318548_105407032	3300031793	Soil	SNLTTALMGRKGVFVSDQAQKVGIFGIQDATGPTTLLGLSEVREGSPAAPTRAYFSNLFNSSRPVPTHFLPEPSPNFLP
Ga0318557_104165191	3300031795	Soil	ENQLSTSTEFICWEEIPITSINPNLTTTLMGRKGVFVSAPAKKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVAVPTHFLPTPSPNFLP
Ga0318523_100498823	3300031798	Soil	MGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETQENYGGRVSFSNLFNSSVAVPTRFLPTPSPNFLP
Ga0318523_105877602	3300031798	Soil	TEFICWEEVAIESLDSNLTTALMGRKGVFVSDQAQKVGIFGIQDATGPTTLLGLSEVREGSPAAPTRAYFSNLFNSSRPVPTHFLPEPSPNFLP
Ga0318497_106505862	3300031805	Soil	WEEVAIEAINPDLTTTLMGRKGVFVSAPATKVGIFGVQDDTGPTTLLGLSEVREGSPAAPTRAYFGNLFNSSRPVPTRFVPTPSPNFLP
Ga0318568_109863381	3300031819	Soil	IPITSINPDLTTTVMGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETQENYGGRVSFSNLFNSSVAVPTRFLPTPSPNFLP
Ga0318567_103450422	3300031821	Soil	TSINPNLTTTVMGRKGVFVSAPATKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVPVPTRFLPAPSSIFLP
Ga0318567_103577141	3300031821	Soil	KGVFVSAPAKKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVAVPTHFLPTPSPNFLP
Ga0307478_110262132	3300031823	Hardwood Forest Soil	FICWAEVPIDTIDPNLTSAFMGRKGVVVSGPAQKLGIFGISDETGPTTLLGLSETSEGGVTAPRPRASFSRLFNSSVPAPTHFLPFSSPNLPP
Ga0310917_102816052	3300031833	Soil	VMGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETQENYGGRVSFSNLFNSSVAVPTRFLPTPSPNFLP
Ga0306919_103881621	3300031879	Soil	MGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETQEGPAAAPTARVSFSNLFNSSVPVSTRFLPTPSPNFLP
Ga0306919_115051441	3300031879	Soil	KEGVVVSAQAKKVQIFGITDESGPTTLLGLSETLEGGTFPSAPTSPGPWPRDSFSGLFNGSVPAPTRFLPTQ
Ga0318544_101928271	3300031880	Soil	PDLTTTLMGRKGVFVSAPATKVGIFGVQDDTGPTTLLGLSEVREGSPAAPTRAYFGNLFNSSRPVPTRFVPTPSPNFLP
Ga0306925_114364401	3300031890	Soil	PVFVALTDINANLITTQMGRKGVFVSAPAEKVGIFGITDEIGPTTLLGLAETLEGGVFPPTAPWPRVSFTGLFNSSVPVPTHFLPSP
Ga0318520_110948221	3300031897	Soil	QLSAATEFICWEEVSLTAISTDLITAQMGRKGVFVSDSATKVGLFGISDTTGPVSLLGLSEVLEGGVFPPVAPWPRASFTGLFNSSVPVPTKFLPTPSPNFLP
Ga0306921_101958844	3300031912	Soil	EVALTDIYPELATRLMGRKGVMVSAQATKVQIFGISDESGPATLLLSETLEGPATAPWPRASFGRLFNSSVPAPTHFLPTPLPILLPC
Ga0306921_125361082	3300031912	Soil	FICWGEFPLTALAGGDLTTALMGREGTFISTRAEKVQIFGITDGSGPTSLLGLAETLEGGVFPPVAPWPRASFTGLFNSSVPVVSHFLPTP
Ga0310916_108692641	3300031942	Soil	VMGRKGVFTSGPAEKVGIFGIQDDTGPTTLLGLSETLEGPLPTAPWARATYYTLFYDSVTVPTRFRPSRQ
Ga0310909_101598061	3300031947	Soil	INPDLTTVLMGRTGVVVSAPAKKVGIYGIQDETGPTTLLGLSETLEGGAGTPNARVSFSDLFNSSVVVPTHFLPTPSPNFLP
Ga0306926_102987893	3300031954	Soil	ICWEEIPIDQIDPNLTAAFMGREGVVVSAQAKKVGIFGITDETGPTTLLGLSEVLEGGTFPSAPTLPGPWPRATFSGLFNSSVPSPTRFLPTP
Ga0307479_110885892	3300031962	Hardwood Forest Soil	STSTEFICWEEIPITSINPDLTTTVMGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETQEGPAAAPTARVSFSNLFNSSVPVPTRFLPTPSPNFLP
Ga0306922_114436971	3300032001	Soil	QLSTSTEFICCEEIFLTDIDPNLVTTVMGRKGVFASGPAEKVQIFGITDESGPTTLLGLSETLEGPFPTAPWSRASYYTLLNDSVVVPTRFLPTPPIFLP
Ga0318507_100308564	3300032025	Soil	DSNLTTALMGRKGVFVSDQAQKVGIFGIQDATGPTTLLGLSEVREGSPAAPTRAYFSNLFNSSRPVPTHFLPEPSPNFLP
Ga0318507_103902741	3300032025	Soil	KGVFVSAPATKVGIFGVQDDTGPTTLLGLSEVREGSPAAPTRAYFGNLFNSSRPVPTRFVPTPSPNFLP
Ga0318549_101838572	3300032041	Soil	TATEFICWEEVAIEAINPALTTTLMGRKGVFVSAPATKVGIFGVQDDTGPTTLLGLSEVREGSPAAPTRAYFGNLFNSSRPVPTRFVPTPSPNFLP
Ga0318533_100028571	3300032059	Soil	DLTTTVMGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETLEGPAAAPTARVSFSNLFNSSVPVPTKFLPTPSPIFLP
Ga0318510_101157802	3300032064	Soil	VMGRKGVFVSAPATKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVPVPTRFLPAPSSIFLP
Ga0318513_105149171	3300032065	Soil	TEFICWEEIAVDSINLDLTTTVMGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETQENYGGRVSFSNLFNSSVAVPTRFLPTPSPNFLP
Ga0318553_102075992	3300032068	Soil	TTVMGRKGVFVSAPATKVGIFGISDETGPTTLLGLAETQENYGGRVSFSNLFNSSVAVPTRFLPTPSPNFLP
Ga0306924_106001901	3300032076	Soil	IPITSINPDLTTVLMGRTGVVVSAPAKKVGIYGIQDETGPTTLLGLSETLEGGAGTPNARVSFSDLFNSSVVVPTHFLPTPSPNFLP
Ga0318540_106010361	3300032094	Soil	SAIGSENHLSTATEFICWEEVALTDIYPELTTRLMGRKGVMVSAQATKVQIFGISDESGPATLLGLSETLEGPATAPWPRASFGRLFNSSVPAPTHFLPTPLPILLP
Ga0307470_110016071	3300032174	Hardwood Forest Soil	NGALTTANMGRKGVFVSDQAEKVQHAGISDASGNVTLLGLAEFLEGGVFPPVASWPRASFTGLFNSSVPVPTRFLPAPSSIFFP
Ga0307470_116147591	3300032174	Hardwood Forest Soil	TTTEFICWEEVAIDQIDPNLTTTLMGREGVVVSFQAKKVGIFGITDETGPTTLLGLSEALEGGTFPSAPTSPGPWPRASFSGLFNSSVPAPTRFLPVP
Ga0307472_1004603881	3300032205	Hardwood Forest Soil	FVSAPATKVGIFGISDDTGPTTLLGLAETLEGGVFPPVAPWPRAFFSNLFNSSVPVPTRFLPTPSPNFLP
Ga0307472_1027741951	3300032205	Hardwood Forest Soil	AIEMIDPNLTAAVMGREGVVVSDQAKKVGIFGITDETGPTTLLGLSETLEGGTFPSASTSPGPWPRASFSRLFNSSVPAPTRFLPTP
Ga0306920_1015181112	3300032261	Soil	FICWAEVPVNAISTDLTTAQMGRKGVFVSAQAVKVAITQSDSTGPVTLLGLSEVLEGGTFPGAAVAPGPWPRASFTGLFNSSHPVPTHFLPTPSPNLLLP
Ga0310914_113805852	3300033289	Soil	TRLMGRKGVFVSAPATKVGIFGIQDETGPTTLLGLSETLEGGVFPPTAPWPRASFSNLFNSSVAAPTHFLPTRSPNFLP
Ga0318519_104256822	3300033290	Soil	ITSINPDLTTTLMGRKGVFVSAPAKKVGIFGIQDETGPTTLLGLAETLEGGVFPPVAPWPRASFSNLFNSSVAVPTHFLPTPSPNFLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068336

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences