Metagenome / Metatranscriptome Family F068444

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068444
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	75 residues
Representative Sequence	MVVQQARRVTSEEHNDLLDVWREQVNQARRGQQASWSLAQGLAQQSAEAYEDFLESVFFYYGENARAAEKGTREG
Number of Associated Samples	56
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.42 %
% of genes near scaffold ends (potentially truncated)	26.61 %
% of genes from short scaffolds (< 2000 bps)	91.13 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.548 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (43.548 % of family members)
Environment Ontology (ENVO)	Unclassified (44.355 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.484 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.87% β-sheet: 0.00% Coil/Unstructured: 29.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00072	Response_reg	3.23
PF00313	CSD	3.23
PF07311	Dodecin	2.42
PF05656	DUF805	2.42
PF13340	DUF4096	0.81
PF00795	CN_hydrolase	0.81
PF13426	PAS_9	0.81
PF03551	PadR	0.81
PF00166	Cpn10	0.81
PF04075	F420H2_quin_red	0.81
PF13358	DDE_3	0.81
PF03704	BTAD	0.81
PF01042	Ribonuc_L-PSP	0.81
PF13699	DUF4157	0.81
PF00561	Abhydrolase_1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	2.42
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	2.42
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.81
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.81
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.81
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.81
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.81
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.55 %
All Organisms	root	All Organisms	31.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.55 %
cellular organisms	root	All Organisms → cellular organisms	31.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20.16 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.55 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	15.32 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.61 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	1.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.55 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	15.32 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	1.61 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	1.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.55 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	15.32 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	1.61 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	1.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.55 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	10.48 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1.61 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	1.61 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.81 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.55 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	10.48 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1.61 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1.61 %
Rubrobacter xylanophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	0.81 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805009\|FNTS007_GKN1E7E02I5JTK	Not Available	545	Open in IMG/M
3300000305\|bgg_mtDRAFT_1044440	Not Available	673	Open in IMG/M
3300002568\|C688J35102_120761164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1508	Open in IMG/M
3300004016\|Ga0058689_10046127	Not Available	796	Open in IMG/M
3300005562\|Ga0058697_10098219	Not Available	1210	Open in IMG/M
3300005562\|Ga0058697_10098807	Not Available	1207	Open in IMG/M
3300005562\|Ga0058697_10132110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1071	Open in IMG/M
3300005661\|Ga0058698_10746947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	612	Open in IMG/M
3300007790\|Ga0105679_10563049	Not Available	1305	Open in IMG/M
3300007790\|Ga0105679_10806616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1375	Open in IMG/M
3300007790\|Ga0105679_10923754	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1197	Open in IMG/M
3300009789\|Ga0126307_10131687	Not Available	1997	Open in IMG/M
3300009789\|Ga0126307_10330873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1226	Open in IMG/M
3300009789\|Ga0126307_10471297	Not Available	1013	Open in IMG/M
3300009789\|Ga0126307_10480571	Not Available	1002	Open in IMG/M
3300009789\|Ga0126307_10890691	Not Available	719	Open in IMG/M
3300009789\|Ga0126307_11227015	Not Available	607	Open in IMG/M
3300009789\|Ga0126307_11292516	Not Available	591	Open in IMG/M
3300009840\|Ga0126313_10200914	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300009840\|Ga0126313_10290126	Not Available	1277	Open in IMG/M
3300010036\|Ga0126305_10056931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2235	Open in IMG/M
3300010036\|Ga0126305_10275559	Not Available	1087	Open in IMG/M
3300010036\|Ga0126305_10376290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	933	Open in IMG/M
3300010037\|Ga0126304_10100749	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300010037\|Ga0126304_10193582	Not Available	1328	Open in IMG/M
3300010037\|Ga0126304_11174777	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300010038\|Ga0126315_10336376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	938	Open in IMG/M
3300010038\|Ga0126315_10449915	Not Available	816	Open in IMG/M
3300010038\|Ga0126315_10468920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	799	Open in IMG/M
3300010038\|Ga0126315_10521937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	759	Open in IMG/M
3300010038\|Ga0126315_10882101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	593	Open in IMG/M
3300010038\|Ga0126315_11214976	Not Available	512	Open in IMG/M
3300010039\|Ga0126309_10022906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2754	Open in IMG/M
3300010039\|Ga0126309_10029218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2491	Open in IMG/M
3300010039\|Ga0126309_10153777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1239	Open in IMG/M
3300010039\|Ga0126309_10288230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	944	Open in IMG/M
3300010039\|Ga0126309_10586029	Not Available	700	Open in IMG/M
3300010040\|Ga0126308_10177149	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300010040\|Ga0126308_10427410	Not Available	887	Open in IMG/M
3300010040\|Ga0126308_10748075	Not Available	674	Open in IMG/M
3300010041\|Ga0126312_10062033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2514	Open in IMG/M
3300010041\|Ga0126312_10378771	Not Available	1005	Open in IMG/M
3300010041\|Ga0126312_10384340	Not Available	997	Open in IMG/M
3300010042\|Ga0126314_10143682	Not Available	1657	Open in IMG/M
3300010042\|Ga0126314_10384583	Not Available	1010	Open in IMG/M
3300010042\|Ga0126314_10839290	Not Available	677	Open in IMG/M
3300010042\|Ga0126314_10931896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	643	Open in IMG/M
3300010042\|Ga0126314_10947854	Not Available	637	Open in IMG/M
3300010042\|Ga0126314_11340061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	537	Open in IMG/M
3300010044\|Ga0126310_10079619	Not Available	1924	Open in IMG/M
3300010044\|Ga0126310_10202673	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1306	Open in IMG/M
3300010044\|Ga0126310_10260707	Not Available	1174	Open in IMG/M
3300010044\|Ga0126310_11715191	Not Available	522	Open in IMG/M
3300010044\|Ga0126310_11811727	Not Available	509	Open in IMG/M
3300010045\|Ga0126311_10006769	All Organisms → cellular organisms → Bacteria	6179	Open in IMG/M
3300010045\|Ga0126311_10339916	Not Available	1141	Open in IMG/M
3300010045\|Ga0126311_11148289	Not Available	641	Open in IMG/M
3300010166\|Ga0126306_10124394	Not Available	1890	Open in IMG/M
3300010166\|Ga0126306_10380004	Not Available	1101	Open in IMG/M
3300010166\|Ga0126306_10763399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	778	Open in IMG/M
3300010166\|Ga0126306_10800947	Not Available	760	Open in IMG/M
3300010166\|Ga0126306_11260677	Not Available	609	Open in IMG/M
3300010166\|Ga0126306_11480233	Not Available	563	Open in IMG/M
3300010166\|Ga0126306_11749449	Not Available	520	Open in IMG/M
3300010395\|Ga0058701_10720073	Not Available	547	Open in IMG/M
3300012091\|Ga0136625_1328532	Not Available	515	Open in IMG/M
3300012212\|Ga0150985_104759758	Not Available	889	Open in IMG/M
3300012469\|Ga0150984_101963061	Not Available	899	Open in IMG/M
3300012469\|Ga0150984_102994901	Not Available	815	Open in IMG/M
3300014487\|Ga0182000_10579152	Not Available	538	Open in IMG/M
3300014488\|Ga0182001_10006887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2356	Open in IMG/M
3300014488\|Ga0182001_10028146	Not Available	1373	Open in IMG/M
3300014488\|Ga0182001_10071231	Not Available	1000	Open in IMG/M
3300014488\|Ga0182001_10123878	Not Available	841	Open in IMG/M
3300014488\|Ga0182001_10405034	Not Available	595	Open in IMG/M
3300014488\|Ga0182001_10408786	Not Available	593	Open in IMG/M
3300018422\|Ga0190265_10551763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1269	Open in IMG/M
3300018422\|Ga0190265_13493513	Not Available	524	Open in IMG/M
3300018432\|Ga0190275_10723329	Not Available	1054	Open in IMG/M
3300018465\|Ga0190269_10889633	Not Available	655	Open in IMG/M
3300018466\|Ga0190268_10072170	Not Available	1482	Open in IMG/M
3300018466\|Ga0190268_10533937	Not Available	808	Open in IMG/M
3300018466\|Ga0190268_11694905	Not Available	563	Open in IMG/M
3300018466\|Ga0190268_12245563	Not Available	512	Open in IMG/M
3300018466\|Ga0190268_12295644	Not Available	508	Open in IMG/M
3300018875\|Ga0193608_1102791	Not Available	619	Open in IMG/M
3300018877\|Ga0193600_1120353	Not Available	605	Open in IMG/M
3300018891\|Ga0193610_1031503	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300018891\|Ga0193610_1101675	Not Available	736	Open in IMG/M
3300018910\|Ga0193598_1030977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1329	Open in IMG/M
3300018910\|Ga0193598_1143751	Not Available	539	Open in IMG/M
3300018918\|Ga0193616_1019310	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300018920\|Ga0190273_10006132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4738	Open in IMG/M
3300018920\|Ga0190273_11403720	Not Available	610	Open in IMG/M
3300018931\|Ga0193601_1153827	Not Available	617	Open in IMG/M
3300018933\|Ga0193614_1042971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1280	Open in IMG/M
3300018933\|Ga0193614_1199887	Not Available	536	Open in IMG/M
3300018939\|Ga0193593_1060400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	960	Open in IMG/M
3300018939\|Ga0193593_1104847	Not Available	703	Open in IMG/M
3300019132\|Ga0193604_1010290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1647	Open in IMG/M
3300019377\|Ga0190264_10613780	Not Available	779	Open in IMG/M
3300019377\|Ga0190264_11329156	All Organisms → cellular organisms → Bacteria → Terrabacteria group	609	Open in IMG/M
3300019377\|Ga0190264_11811315	Not Available	550	Open in IMG/M
3300019767\|Ga0190267_10408006	Not Available	761	Open in IMG/M
3300020181\|Ga0196958_10105100	Not Available	939	Open in IMG/M
3300021184\|Ga0196959_10072455	Not Available	752	Open in IMG/M
3300021184\|Ga0196959_10184802	Not Available	528	Open in IMG/M
3300024430\|Ga0196962_10003000	All Organisms → cellular organisms → Bacteria → Acidobacteria	5407	Open in IMG/M
3300024430\|Ga0196962_10007101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3422	Open in IMG/M
3300025167\|Ga0209642_10780808	Not Available	502	Open in IMG/M
3300027766\|Ga0209796_10197815	Not Available	637	Open in IMG/M
3300030496\|Ga0268240_10025986	Not Available	1144	Open in IMG/M
3300030502\|Ga0268258_10145626	Not Available	566	Open in IMG/M
3300030510\|Ga0268243_1113495	Not Available	637	Open in IMG/M
3300030513\|Ga0268242_1003443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2333	Open in IMG/M
3300030513\|Ga0268242_1024488	Not Available	1038	Open in IMG/M
3300030513\|Ga0268242_1086732	Not Available	635	Open in IMG/M
3300032159\|Ga0268251_10196734	Not Available	788	Open in IMG/M
3300033989\|Ga0334924_016772	Not Available	902	Open in IMG/M
3300034009\|Ga0334944_031425	Not Available	1013	Open in IMG/M
3300034174\|Ga0334932_093726	Not Available	526	Open in IMG/M
3300034377\|Ga0334931_089459	Not Available	714	Open in IMG/M
3300034393\|Ga0334914_058805	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.52%
Host-Associated	Host-Associated	10.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.71%
Plants	Host-Associated → Plants	9.68%
Aquatic	Environmental → Aquatic	0.81%
Human	Host-Associated → Human	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.71%
Phylloplane	Host-Associated → Plants → Phylloplane	5.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.61%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.61%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Digestive System	Host-Associated → Human → Digestive System	0.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.55%
Sand	Environmental → Terrestrial → Soil → Sand	17.74%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.65%
Loam	Environmental → Terrestrial → Soil → Loam	1.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.61%
Ice	Environmental → Aquatic → Freshwater → Ice	0.81%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.81%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	65.32%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	17.74%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.65%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.81%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	43.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.10%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	11.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.68%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	6.45%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.65%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	3.23%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.61%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.61%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.81%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805009	Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site	Environmental	Open in IMG/M
3300000305	Blue grama grass rhizosphere microbial communities from Sevilleta, New Mexico, USA - Combined Assembly	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005661	Agave microbial communities from Guanajuato, Mexico - As.Sf.e	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018877	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018931	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019132	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300027766	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030502	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033989	Biocrust microbial communities from Mojave Desert, California, United States - 20HNC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034393	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 10HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS007_06206520	2119805009	Soil	VVAQQTRRRRVATTEGHNDLLDVWRKQVDQARRGQELGWNLARGPAQESAAAYDDFLEALFFYYGENAKAAEEGIKAG
bgg_mtDRAFT_10444401	3300000305	Host-Associated	KGKFFPEALGDRRRACMVVQQAPRRRVTPEGHNDLLDVWREQVDQARRGQEASWSLAQGLAQESVEAYQDFLESVFFYYGENARAAEKGTREG*
C688J35102_1207611642	3300002568	Soil	MVVQQQARRGVTQDSYDDLLDAWREQVEQARRGQEAGWSLARESAEAYEDFLDSLFFYYGENARAAEKGTREG*
Ga0058689_100461271	3300004016	Agave	MVVQQARKATHKQHDELFDAWLEQVEQARRGQEAGWGLARDLARESADAYEEFLESIFFYYGENVKAAEKGTKEG*
Ga0058697_100982192	3300005562	Agave	HNDLLDVWREQVNQARRGQEASLSLARDSADAYEDFLESIFFYYGENARVAEKGTREG*
Ga0058697_100988072	3300005562	Agave	MVFYQARQVTPEGHNDLLEVWREQVNQARRGQEASLSLAQQSADAYEDFLESVFFYYGENAKVHNK*
Ga0058697_101321102	3300005562	Agave	MVVQQARKATHKQPNDLFDAWLEQVEHARRGQEAGWDLARDLARESADAYEEFLESIFFYYGENVKAAEKGTKEG*
Ga0058698_107469471	3300005661	Agave	MVVQQARRVTSEENNDLLDVWREQVNQARRGQEASLSLAQQSADAYEDFLESVFFYYGENAKVHKNR*
Ga0105679_105630492	3300007790	Soil	MVVQQARRVTSEEQHNDLLDVWREQVDQARRGQEASWSLAQGLARDSADAYEDFLESIFFYYGENARAAEKGTREG*
Ga0105679_108066162	3300007790	Soil	MVVQQTPRRVTSKEHNDLLNVWREQVDQARRGQDASWSIAHGLARESAAAYEGFLESVFFYYGENARAAEKGTREG*
Ga0105679_109237541	3300007790	Soil	MVLQQAPRRVTTPEEHNGLLDVWQEQVDQARRGQEASWSLAQGLAQESAEAYEDFLESIFFYYGENARAAEKGTREG*
Ga0126307_101316871	3300009789	Serpentine Soil	MVVQQARRVTSEEHNDLLDVWREQVNQARRGQEASLSLAQQSVDAYEDFLESVFFYYGENAKAAEKGTREG*
Ga0126307_103308734	3300009789	Serpentine Soil	VDNQQAGRVTQKGHNDPLEAWREQVEEARRGQEASWSLAQDLAQQSADAYEDFLEFVFFYYGENAKAAEKGTRQG*
Ga0126307_104712971	3300009789	Serpentine Soil	MVVHQARQVTPEGHNDLLDVWREQVNQARRGQEASWSLAQQSADAYEDFLESVFFYYGENARAAEKGSR*
Ga0126307_104805711	3300009789	Serpentine Soil	MVFHQARQVTPERHNDLLDVWREQVNQARRGQKASWSLAQDLAQQSADAYEDFLKSIFFYYGENARVAEKGTTEG*
Ga0126307_108906911	3300009789	Serpentine Soil	MVVQQARQVTPEGHNDLLDVWREQVNQARRGQEASWSLAQGLAQQSADAYEDFLESVFFYYGESARATEKGARDYRRAD*
Ga0126307_112270152	3300009789	Serpentine Soil	MVVQQARRVTSEENNDLLDVWREQVNQARRGQEASWSLAQGLAQQSADAYEDFLESVFFYYGESARAAEKGAREHRRAD*
Ga0126307_112925161	3300009789	Serpentine Soil	MVVQQARRGGQEERPNGLLLLDTWREQVEQARREQEAGRSLAQGLARDSADAYEDFLDSILFYYGENARPAEKGAKGHRRAD*
Ga0126313_102009143	3300009840	Serpentine Soil	MVFHQARRVTPQEHIDLLDVWREQVNQARRGQEASWSLAQDLAQQSAAAYEGFLESVFFYYGENARAAEKGTREG*
Ga0126313_102901262	3300009840	Serpentine Soil	MVVQQARRVTSEEHNDLLDVWREQVDQARRGQEASWSLAQQSADAYEDFLESVFFYYGESARAAEKGAREHRRAD*
Ga0126305_100569314	3300010036	Serpentine Soil	MVFYQARQVTSEEHNDLLDVWREQVDQARGGQEASWSLAQGLAQQSADAYEDFLESIFFYYGEN
Ga0126305_102755591	3300010036	Serpentine Soil	MVFHQARQVTPERHNDLLDVWREQVNQARRGQKASWSLAQDLAQQSADAYEDFLKSIFFYYGENARAAEKGTTEG*
Ga0126305_103762901	3300010036	Serpentine Soil	LDNQQAGRITQKEHNALLDVWREQVNQARGGQEACWSLAQDLAQQSADAYKDFLESVFFYYGENARAAEKGTREG*
Ga0126304_101007492	3300010037	Serpentine Soil	MVFYQARQVTSEEHNDLLDVWREQVDQARRGQEASWSLAQGLAQQSADAYEDFLESIFFYYGENAKAAEKGTREG*
Ga0126304_101935821	3300010037	Serpentine Soil	ARRVTSEEHNDLLDVWREQVNQARRGQEASWSLAQGLARDSADAYEDFLESVFFYYGESAKAAEKGTREG*
Ga0126304_111747772	3300010037	Serpentine Soil	LDNQQAGRITQTEHNALLDVWREQVNQARGGQEACWSLAQDLAQQSADAYKDFLESVFFYYGENARAAEKGTR
Ga0126315_103363762	3300010038	Serpentine Soil	MVVQQARRVTSEEHNDLLDVWREQVNQARRGQEASWSLAQGLARDSADAYEDFLESVFFYYGESAKAAEKGTREG*
Ga0126315_104499151	3300010038	Serpentine Soil	MVFYQARQVTSEEHNDLLDVWREQVNQARRVQEASWSLAQDLAQQSADAYEDFLESIFFYYGENAKAAEKGTREG*
Ga0126315_104689202	3300010038	Serpentine Soil	MVVQQARQVTPEGHNDLLDVWRAQVNQARRGQEASWSLAQQSADAYEDFLESVFFYYGESARAAEKGARGYRRAD*
Ga0126315_105219373	3300010038	Serpentine Soil	VDNQQAGRITQKEHNDLLDVWREQVNQARGGQEASWSLAQQSADAYKDFLESVFFYYGENARAAEKGTKEG*
Ga0126315_108821012	3300010038	Serpentine Soil	LDNQQAGRITQKEHNDLLDVWREQVNQARGGQEACWSLAQDLAQQSADAYKDFLESVFFYYGENARAAEKGTREG*
Ga0126315_112149761	3300010038	Serpentine Soil	KEPTFLVNNQQAGRVTQKGHNDPLEAWREQVEEARRGQEASWSLAQDLAQQSADAYEDFLKSIFFYYGENARAAEKGTTEG*
Ga0126309_100229065	3300010039	Serpentine Soil	MVVQQARQVTPEGHNDLLDVWREQVNQARRGQEASWSLAQGLAQQSADAYEDFLKSVFFYYGESARAAEKGARGYRRAD*
Ga0126309_100292181	3300010039	Serpentine Soil	ARRVTSEEHNDLLDVWREQVNQARRGQQASWSLAQGLAQQSADAYEDFLESLFFYYGENARAA*
Ga0126309_101537771	3300010039	Serpentine Soil	VDNQQAGRITQKEHNDLLDVWREQVNQARGGQEASWSLAQDLAQQSADAYEDFLESIFFYYGENARAAEKGTREG*
Ga0126309_101918572	3300010039	Serpentine Soil	DLLDVWREQVNQARRGQEASWSLAQGLARDSADAYEDFLEAVFFYYGENAKAAEKGTREG
Ga0126309_102882302	3300010039	Serpentine Soil	MVVQQPPRRRVTPQEHRDLLDLWREQVDQARRGQEAGWSLAQDLARESADAYNDFLESIFFYYGENTRAVEKGTKEG*
Ga0126309_105860291	3300010039	Serpentine Soil	MVVHQARQVTPEGHNDLLDVWREQVNQARRGQEASWSLAQGLAWQSAEAYEDFLESVFFYYGENARAAEKGTREG*
Ga0126308_101771491	3300010040	Serpentine Soil	MVFYQARQVTSEEHNDLLDVWREQVDQARGGQEASWSLAQGLAQQSADAYEDLLESIFFYYGENARAAEKGTREG*
Ga0126308_104274101	3300010040	Serpentine Soil	HNDLLDVWREQVDQARRGQEASWSLAQGLARDSAEAYEDFLESVFFYYGENARAAEKGTREG*
Ga0126308_107480751	3300010040	Serpentine Soil	MVVHQARQATSEGHNNLLDVWREQVNQARRGQEASWSLAQGLARDSADTYEDFLESIFFYYGENARAAEKGTREG*
Ga0126312_100620333	3300010041	Serpentine Soil	MVVQQARQVTPEGHNDLLDVWREQVNQARRGQEASWSLAQQSADAYEDFLESVFFYYGESARAAEKGARVYRRAD*
Ga0126312_103787712	3300010041	Serpentine Soil	VDNQQAGRVTQKEHNDLLEAWREQVNQARGGQEACWSLAQDLAQQSADAYKDFLESVFFYYGENARAAEKGTREG*
Ga0126312_103843402	3300010041	Serpentine Soil	MVVQQARRVTSEENNDLLDVWREQVDQARRGQEASWSLAQGLARDSAEAYEDFLDSIFFYYGEYARAAEKDTREG*
Ga0126314_101436821	3300010042	Serpentine Soil	MVVQQARRVTSEENNDLLDVWREQVNQARRGQEASWSLAQQSADAYEDFLESVFFYYGENAKAAEKGTREG*
Ga0126314_103845833	3300010042	Serpentine Soil	MVVQQTRQVTPEGHNDLLDIWREQVNQARRGQEASWSLAQQSADAYEDFLESVFFYYGESARAAEKGAREYRRAD*
Ga0126314_108392902	3300010042	Serpentine Soil	MVVYQARQATSEGHNDLLDVWREQVNQARRGQEANWSLAQGLAQQSADAYEDFLESVFFYYGENAKAAEKGTREG
Ga0126314_109318961	3300010042	Serpentine Soil	LDNQQAGRITQKEHNALLDVWREQVNQARGGQEACWSLAQDLAQQSADAYKDFLESVFFYYGENAR
Ga0126314_109478542	3300010042	Serpentine Soil	MVFHQARQITPEGHSDLLDVWREQVNQARRGQEASWSLAQSLAQQSADAYEDFLESVFFYYGENARAAEKGTTEG*
Ga0126314_113400611	3300010042	Serpentine Soil	LDNQQAGRITQKEHNDLLDVWREQVDQARGGQEACWSLAQDLAQQSADAYKDFLESVFFYYGENAR
Ga0126310_100796194	3300010044	Serpentine Soil	MVVQQARQVTPEGHNDLLDVWREQVNQARRGQEASWSLAQGLAQQSADAYEDFLESVFFYYGESARAAEKGARVYRRAD*
Ga0126310_102026733	3300010044	Serpentine Soil	QEHIDLLDVWREQVNQARRGQQASWSLAQDLAQQSAAAYEGFLESVFFYYGENARAAEKGTREG*
Ga0126310_102607072	3300010044	Serpentine Soil	MVVQHTTRRVTPETHDDLLDVWREQVDQARRGHELGWNLAQGLAQESAAAYDDFLEALFFYYGENARAAEEGTNAG*
Ga0126310_117151911	3300010044	Serpentine Soil	KQHNSKEHNDLLDVWREQVNQARRGQQASWSLAQGLAQQSAEAYEDFLESVLFYYGENARAAEKGTREG*
Ga0126310_118117271	3300010044	Serpentine Soil	CERGRALMVVQQAPRRRVITPEEHNDLLDVWRERIDQARRGQELGWSVAQGLAQESAATYEGFLESVFFYYGENARAAEGGTKAG*
Ga0126311_100067698	3300010045	Serpentine Soil	VDNQQAGRITQKEHNDLLDVWREQVNQARGGQEASWSLAQDLAQQSADAYKDFLESVFFYYGENARAAEKGTKEG*
Ga0126311_103399161	3300010045	Serpentine Soil	MVVYQARQATSEGHNDLLDVWREQVNQARRGQEANWSLAQGLAQQSADAYEDFLESVFFYYGENAKAAEKGTREG*
Ga0126311_111482891	3300010045	Serpentine Soil	MVFHQARQITPEGHSDLLDVWREQVNQARRGQEASWSLAQSLAQQSADAYEDFLESVF
Ga0126306_101243941	3300010166	Serpentine Soil	MVVQQARRVTSEEHNDLLDVWREQVNQARRGQEASWSLAQQSADAYEDFLESVFFYYGESAKAAEKGTREG*
Ga0126306_103800041	3300010166	Serpentine Soil	EHNDLLDVWREQVNQARGGQEASWSLAQDLAQQSADAYKDFLESVFFYYGENARAAEKGTREG*
Ga0126306_107633993	3300010166	Serpentine Soil	VDNQQAGRITQKEHNDLLDVWREQVNQARGGQEASWSLAQGLAQQSADAYEDFLESIFFYYGENAKAAEKGTREG*
Ga0126306_108009471	3300010166	Serpentine Soil	MVVQQAARRRVTPEEHRDLMDVWREQVDQARRGQEVGWSLAQDLARESADAYGDFLESVFFYYGENTRAVEKGTKEG*
Ga0126306_112606772	3300010166	Serpentine Soil	VDNQQAGRVTQKGHNDPLEAWREQVEEARRGQEASWSLAQDLAQQSADAYEDFLESVFFYYGESAKAAEKGTRQG*
Ga0126306_114802331	3300010166	Serpentine Soil	VVQQARRVTSEEHNDLLDVWREQVNQARRGQEASLSLAQQSVDAYEDFLESVFFYYGENAKAAEKGTREG*
Ga0126306_117494492	3300010166	Serpentine Soil	VVQQARRVTSEEHNDLLDVWREQVNQARRGQEASWNLAQGLARDSADDYEDFLESIFFYYGESARAAEKGARGHRRAD*
Ga0058701_107200731	3300010395	Agave	MVVQQARRVTSEEHNDLLDVWREQVNQARRGQEASLSLARDSADAYEDFLESIFFYYGENARVAEKGTREG*
Ga0136625_13285321	3300012091	Polar Desert Sand	RGRSLMVVQQAARRRVTPEEHRDLLEVWREQVDQARRGQGVGWSVAQDLARESADAYEGFLESVFFYYGENTRAVEKGTKEG*
Ga0150985_1047597581	3300012212	Avena Fatua Rhizosphere	RGISLPKRRTREGAIRMVVQQQARRGVTQDSYDDLLDAWREQVEQARRGQEAGWSLARESSEAYEDFLDSLFFYYGENARAAEKGTREG*
Ga0150984_1019630611	3300012469	Avena Fatua Rhizosphere	CKDRMVSWHHGWERGISLPKRRTREGAIRMVVQQQARRGVTQDSYDDLLDAWREQVEQARRGQEAGWSLARESAEAYEDFLDSLFFYYGENARAAEKGTREG*
Ga0150984_1029949011	3300012469	Avena Fatua Rhizosphere	MVVQQARRVVTQDSYNDLLDAWREQVEHARRGQEAGWSLTHSLARQSADAYEDFLDSIFFYYGENTREAEKSTREG*
Ga0182000_105791521	3300014487	Soil	MVVQQARRVTSEEHNNLLAIWREQVNQARRGQEASWSLAQGFAQQSADAYEDFLESVFFYYGANARATEKDAREG*
Ga0182001_100068871	3300014488	Soil	QARRVTSKQHNSKEHNDLLDVWREQVNQARRGQQASWSLAQGLAQQSAEAYEDFLESVFFYYGENARAAEKGTREG*
Ga0182001_100281461	3300014488	Soil	QARRVTSKQHNSKEHNDLLDVWREQVNQARRGQQASWSLAQQSAEAYEDFLDSIFFYYGEYARAAEKGTREG*
Ga0182001_100712312	3300014488	Soil	MVVQQARRVTSEEHNNLLAVWREQVNQARRGQEASWSLAQGFAQQSADAYEDFLESVFFYCGANARATEKDTREG*
Ga0182001_101238781	3300014488	Soil	MVVQQARRVTSEENNDLLNAWREQVNQARRGQEASWSLAQGLARDSADAYEDFLESIFFYYGENARAAEKGTREAETQRL*
Ga0182001_104050341	3300014488	Soil	MAIQQARRVTSEEHNDLLDVWREQVNQARRGQEASWSLAQQSADAYEDFLESVFFYYGENARAAEKGTREG*
Ga0182001_104087861	3300014488	Soil	MVLQQSPRRRVITPEEHNDLLDVWREQVDQARRGQEASWSIAQGLAQESAEAYEDFLESVFFYFGENARAAENGTREG*
Ga0190265_105517633	3300018422	Soil	MVVQQAPRRRVTPEEHNDLLDVWREQVDQARRGQEASWSLAQGLAQESAEAYEDFLESIFFYYGENARAAEKGTREG
Ga0190265_134935131	3300018422	Soil	MVVQQAPRRVTPEEHNDLLDVWREQVNQARRGQEASWSLAQGLAQESAEAYEDFLESIFFYYGENARAA
Ga0190275_107233293	3300018432	Soil	MVVQQEPRRATPQKHRDLLGVWREQVDQARRRQEAGWNVAQGLAQESADAYEDFLESIFFYYSENARAAEKGIREG
Ga0190269_108896332	3300018465	Soil	MVVQQAPRRRVTTPEGHNDLLDVWREQVDQARRGQEASWSLAQGLAQESAEAYEDFLESVFFYYGENARAVEKGTREG
Ga0190268_100721703	3300018466	Soil	MVVQQAPRRRVTTPEGHNDLLDVWREQVDQARRGQEASWSVAQGLAQESAAAYEDFLESVFFYYGENARAVEKGTREG
Ga0190268_105339371	3300018466	Soil	MVVQQAKRVTSEENNDLLDVWREQVNQARRGQEASLSLARDSADAYEDFLESIFFYYGENARAAEKGTREG
Ga0190268_116949051	3300018466	Soil	MVVQQAPRRVITPEEHNDLLDVWREQIDQARRGQELGWSVAQGLAQESAAAYEGFLESVFFYYGENARAAEKGTREG
Ga0190268_122455631	3300018466	Soil	MVVHQARRVTSKQHDSKEHNDLLDVWREQVNQARRGQQASWSLAQGLAQQSAEAYEDFLESVFFYDGENARAAEKGTREG
Ga0190268_122956441	3300018466	Soil	RLGKGEFFPEAIGGRRRALMVVQQAPRRRVITPEGHNDLLDVWREQVNQARRGQEASWSLAQGLAQESAEAYEDFLESIYFYFGENARAAEKGTREG
Ga0193608_11027912	3300018875	Soil	MVVQQAPRRRVTPEEHNDLLEVWREQVAQARRGQEVGWSLAQGLAQESADAYEGFLESVFFYYGENARAAEEGTREG
Ga0193600_11203531	3300018877	Soil	MVVQQAPRRRVITAEEHNDLLDVWREQVNQARRGQEASWSLAQNLAQQSAKAYEDFLESVFFYYGENARAAEKGTKEG
Ga0193610_10315032	3300018891	Soil	MVVQQAARRRVTPEEHNDLLEVWREQVDQARRGQEVGWSLAQGLAQESADAYEGFLESVFFYYSENARAAEEGTREG
Ga0193610_11016751	3300018891	Soil	MVVQQTPKRVTSEEHNDLLNVWREQVDQARRGHEVSWSIAHGLARESAAAYEGFLESVFFYYGENARAAEKGIREG
Ga0193598_10309772	3300018910	Soil	MAVQQPPRRVTPEDHDDLLDAWREQIDQTRRGQEASWSVAQGLARESAAAYEDFLESVFFYYGENARAAEEGTREG
Ga0193598_11437511	3300018910	Soil	MVVQQAPRRRVTPEGHNDLLDVWREQVDQARRGQEASWSLAQGLAQESADAYEDFLESVFFYYRENARATKKGSTLRRS
Ga0193616_10193104	3300018918	Soil	MVVQQAPRRRVTPEGHNDLLDVWREQVDQARRGQEASWSLAQGLAQESAEAYQDFLESVFFYYSENARAAEEGTREG
Ga0190273_100061327	3300018920	Soil	MVLQQAPRRVITPEEHNDLLEVWREQVDQARRGQEASRSLAQGLAQESAEAYEDFLESVFFYFGENARAAEKGTREG
Ga0190273_114037202	3300018920	Soil	MVLQQTPRRVITPEEHNDLLDVWREQVNQARRGQEASWSLAQGLAQESAEAYEDYLESVYFYFGENARAAEKGTREG
Ga0193601_11538272	3300018931	Soil	VITPEEHNDLLGVWREQVDQARRGHEVSWSIAHGLARESAAAYEGFLESVFFYYGENARAAEKGIREG
Ga0193614_10429712	3300018933	Soil	MAVQQPPRRVTPEDHDDLLDAWREQIDQTRRGQEASWSVAQGLARESAAAYEDFLESVFFYYSENARAAEKSTKEG
Ga0193614_11998871	3300018933	Soil	MVVQQPRRVTPEGHNDLLDVWREQIDQARRGQEAGWSLVQGLAQESAEAYEDFLESVFFYYGENARATEKGTREG
Ga0193593_10604001	3300018939	Soil	MAVQQPPRRVTPEDHDDLLDAWREQIDQTRRGQEASWSVAQGLARESAAAYEDFLESVFFYYGENARAAEKSTKEG
Ga0193593_11048471	3300018939	Soil	MVVQQAARRRVTPEEHNDLLEVWREQVDQARRGQEVGWSLAQGLAQESADAYEGFLESVFFYYGENARAAEEGTREG
Ga0193604_10102902	3300019132	Soil	MVVQQPRRVTPEGHDDLLDVWREQIDQTRRGQEASWSVAQGLARESAAAYEDFLESVFFYYGENARAAEKGTKEG
Ga0190264_106137801	3300019377	Soil	HVRSVGQEERRNDLLLLDAWREQVEQARRGQEAGWSVAQGLARDSADAYEDFLNSISFYYGENARAAEKGTREG
Ga0190264_113291561	3300019377	Soil	MVVQQAARRRVTPEEHNDLLEVWREQVAQARRGQEVGWSLAQGLAKESADAYEGFLESVFFYYSEKARAAEEGTKEG
Ga0190264_118113152	3300019377	Soil	MVVQQAPRRVTPEEHNDLLDVWREQVNQARRGQEASWSFPQGLAQESAEAYEDFLESIYFYFGENARAAEKGTREG
Ga0190267_104080062	3300019767	Soil	VVVQQAIRITSEENNDLLDVWREQVNQARRGQEASLSLARDSADAYEDFLESIFFYYGENARVAEKGTREG
Ga0196958_101051002	3300020181	Soil	LVIQQAPRRVTPEKHSDLLNDWREQIDQTRRGQEVSWSIAQGLAQESAAAYDDFLESVFFYYGQNTRAA
Ga0196959_100724552	3300021184	Soil	LVIQQAPRRVTPEKHSDLLNVWREQIDQTRRGQEVSWSIAQGLAQESAAAYDDFLESVFFYYGQNTRAAEKETKEG
Ga0196959_101848021	3300021184	Soil	MVLQQPPRRVITPEEHYDLLDVWREQVDQARRGQDASSSLAQGLAQESAEAYEDFLESVFFYFGENARAAEEGTRER
Ga0196962_100030004	3300024430	Soil	MVVQQVRRVGQEEKAVTPLLLDAWCEQVEQARRGQEAGWSLAQDLARDSADAYEDFLESIFFYYGENARAAEKGARGHRRAD
Ga0196962_100071014	3300024430	Soil	MVVQQAPRRVTPEDYRDLLDVWREQVNQARRGQEVGWSLAQDLAQESADAYEDFLESVFFYYGENTRALEKGTKEW
Ga0209642_107808082	3300025167	Soil	MVVQQVRRAGQEERRNDLPLLLDAWREQVEQARRGQEASWSLAQELAWDSADAYEDFLDSVFFYYGENARVAERGTREGWKSRLA
Ga0209796_101978151	3300027766	Agave	MVVQQARRVTSEEHNDLLDVWREQVNQARRGQQASWSLAQGLAQQSAEAYEDFLESVFFYYGENARAAEKGTREG
Ga0268240_100259861	3300030496	Soil	MVFHQARQVTPERHNDLLDVWREQVNQARRGQEASWSLAQDLARDSADAYEDFLESVFFYYGENARAAEKGTREG
Ga0268258_101456262	3300030502	Agave	MVVQQARRVTSEEHNDLLDVWREQVNQARRGQEASLSLAQQSADAYEDFLESVFFYYGENARAAEKGTREG
Ga0268243_11134951	3300030510	Soil	MVVQQARRVISEEHNDLLDVWREQVNQARRGQEASLSLAQQSADAYEDFLESVFFYYGENAKVHKNR
Ga0268242_10034434	3300030513	Soil	MVVHQARRVTSKQHNSKEHNDLLDVWREQVNQARRGQQASWSLAQGLAQQSAEAYEDFLDSIFFYYGEYARAAEKGTREG
Ga0268242_10244881	3300030513	Soil	MVVQQARRVTSGEHNDLLDVWREQVKQAGKGQEASLSLARDSADAYEDFLESIFFYYGENARVAEKGTREG
Ga0268242_10867321	3300030513	Soil	MVLQQARRVISEEQNDLLDVWREQVNEARRGQEASWSLAQGHAQQSADAYEDFLESIFFYYGENAKAAEKGTREG
Ga0268251_101967342	3300032159	Agave	MVVQQARKATHKQPNDLFDAWLEQVEHARRGQEAGWGLARDLARESADAYEEFLESIFFYYGENVKAAEKGTKEG
Ga0334924_016772_285_572	3300033989	Hypolithic Biocrust	LGKGKFFPEALGDRRRACMVVQQAPRRRVTPEGHNDLLDVWREQVDQARRGQEASWSLAQGLAQESVEAYQDFLESVFFYYGENARAAEKGTREG
Ga0334944_031425_83_370	3300034009	Sub-Biocrust Soil	LGKGKFFPEAIGDRRRACMVVQQAPRRRVTPEGHNDLLDVWREQVDQARRGQEASWSLAQGLAQESVEAYQDFLESVFFYYGENARAAEKGTREG
Ga0334932_093726_214_429	3300034174	Sub-Biocrust Soil	MVVQQARRVTSEEHNDLLDVWREQVNQARRGQEASLSLAQQSADAYEDFLESVFFYYGENAKAAEKGTREG
Ga0334931_089459_441_674	3300034377	Sub-Biocrust Soil	MVVQQAPRRRVTPEGHNDLLDVWREQVDQARRGQEASWSLAQGLAQESVEAYQDFLESVFFYYGENARAAEKGTREG
Ga0334914_058805_1_228	3300034393	Sub-Biocrust Soil	MVVQQAPRRRATPEGHNDLLDVWREQVDQARRGQEASWSLAQGLAQESVEAYQDFLESVFFYYGENARAAEKGTRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068444

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences