Metagenome / Metatranscriptome Family F068563

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068563
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	93 residues
Representative Sequence	VRRLAIFLAGLALLAAGCGKSSGSENVGELVIAVDVPVTGSPYVAQTIRQGVELAASNLNGGGGVRVGSKSYRLKVKLYDNHLSARRAVQ
Number of Associated Samples	113
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.55 %
% of genes near scaffold ends (potentially truncated)	99.19 %
% of genes from short scaffolds (< 2000 bps)	92.74 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.065 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.161 % of family members)
Environment Ontology (ENVO)	Unclassified (33.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.645 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.44% β-sheet: 18.64% Coil/Unstructured: 44.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00005	ABC_tran	30.65
PF12399	BCA_ABC_TP_C	25.81
PF02653	BPD_transp_2	12.90
PF13555	AAA_29	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.06 %
Unclassified	root	N/A	16.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.06 %
Unclassified	root	N/A	16.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.06 %
Unclassified	root	N/A	16.94 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.16 %
Unclassified	root	N/A	16.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.84 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.16 %
Unclassified	root	N/A	16.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.61 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.77 %
Unclassified	root	N/A	16.94 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	14.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	21.77 %
Unclassified	root	N/A	16.94 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	14.52 %
Deltaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.77 %
Unclassified	root	N/A	16.94 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	14.52 %
Deferrisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.77 %
Unclassified	root	N/A	16.94 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	14.52 %
Deferrisoma camini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.77 %
Unclassified	root	N/A	16.94 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	14.52 %
Deferrisoma camini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.77 %
Unclassified	root	N/A	16.94 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	13.71 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.81 %
Deferrisoma camini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0460171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini	502	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105718531	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300000953\|JGI11615J12901_12055833	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300000955\|JGI1027J12803_109283465	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300000956\|JGI10216J12902_102990689	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300004153\|Ga0063455_100013137	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300004157\|Ga0062590_101973086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300004463\|Ga0063356_104054256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	630	Open in IMG/M
3300004479\|Ga0062595_100358456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1020	Open in IMG/M
3300004479\|Ga0062595_101239181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300004480\|Ga0062592_100046540	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300004480\|Ga0062592_102419569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300005332\|Ga0066388_101612260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1143	Open in IMG/M
3300005334\|Ga0068869_101249232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	654	Open in IMG/M
3300005336\|Ga0070680_100320959	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300005337\|Ga0070682_100870205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	738	Open in IMG/M
3300005341\|Ga0070691_10704852	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005345\|Ga0070692_10354593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	912	Open in IMG/M
3300005355\|Ga0070671_100552357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	993	Open in IMG/M
3300005356\|Ga0070674_100960656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	748	Open in IMG/M
3300005444\|Ga0070694_100965669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	706	Open in IMG/M
3300005545\|Ga0070695_100216054	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300005549\|Ga0070704_101463017	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300005562\|Ga0058697_10468575	Not Available	637	Open in IMG/M
3300005564\|Ga0070664_102037280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	545	Open in IMG/M
3300005576\|Ga0066708_10312070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1007	Open in IMG/M
3300005614\|Ga0068856_100099383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2901	Open in IMG/M
3300005614\|Ga0068856_101321398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	736	Open in IMG/M
3300005616\|Ga0068852_100508364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1201	Open in IMG/M
3300006806\|Ga0079220_10304907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	987	Open in IMG/M
3300006854\|Ga0075425_101906354	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300006881\|Ga0068865_102007934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	525	Open in IMG/M
3300009147\|Ga0114129_11721793	Not Available	764	Open in IMG/M
3300009162\|Ga0075423_11436096	Not Available	739	Open in IMG/M
3300009840\|Ga0126313_10006388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	7123	Open in IMG/M
3300010041\|Ga0126312_10324672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1088	Open in IMG/M
3300010042\|Ga0126314_10129381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1743	Open in IMG/M
3300010042\|Ga0126314_11357816	Not Available	533	Open in IMG/M
3300010045\|Ga0126311_10052005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	2637	Open in IMG/M
3300010046\|Ga0126384_11351400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300010360\|Ga0126372_10384937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1273	Open in IMG/M
3300010362\|Ga0126377_10205095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1893	Open in IMG/M
3300010373\|Ga0134128_10953423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	949	Open in IMG/M
3300010375\|Ga0105239_10794401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1084	Open in IMG/M
3300010396\|Ga0134126_11132810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300010396\|Ga0134126_12217141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300010397\|Ga0134124_12535996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300011107\|Ga0151490_1518627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300011107\|Ga0151490_1810905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300012285\|Ga0137370_10685597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300012354\|Ga0137366_10861268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300012356\|Ga0137371_10383701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1090	Open in IMG/M
3300012902\|Ga0157291_10180369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	653	Open in IMG/M
3300012915\|Ga0157302_10535947	Not Available	513	Open in IMG/M
3300012955\|Ga0164298_10699403	Not Available	711	Open in IMG/M
3300012960\|Ga0164301_10331057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1039	Open in IMG/M
3300012961\|Ga0164302_10486859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300012985\|Ga0164308_10775314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300012985\|Ga0164308_11325776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300013306\|Ga0163162_10393033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1519	Open in IMG/M
3300014157\|Ga0134078_10664703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300015201\|Ga0173478_10301065	Not Available	726	Open in IMG/M
3300015371\|Ga0132258_11430367	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300015372\|Ga0132256_103167143	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300015373\|Ga0132257_100246512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2132	Open in IMG/M
3300015374\|Ga0132255_105875254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300017792\|Ga0163161_10806270	Not Available	789	Open in IMG/M
3300017947\|Ga0187785_10541436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300018051\|Ga0184620_10350924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300018482\|Ga0066669_11023048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	746	Open in IMG/M
3300022892\|Ga0247753_1015208	Not Available	824	Open in IMG/M
3300022901\|Ga0247788_1088317	Not Available	604	Open in IMG/M
3300023066\|Ga0247793_1007054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1527	Open in IMG/M
3300023072\|Ga0247799_1051361	Not Available	685	Open in IMG/M
3300023168\|Ga0247748_1036789	Not Available	720	Open in IMG/M
3300023263\|Ga0247800_1075862	Not Available	650	Open in IMG/M
3300024178\|Ga0247694_1017336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	818	Open in IMG/M
3300024182\|Ga0247669_1025631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1004	Open in IMG/M
3300024251\|Ga0247679_1051314	Not Available	692	Open in IMG/M
3300025885\|Ga0207653_10237429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300025893\|Ga0207682_10374708	Not Available	672	Open in IMG/M
3300025911\|Ga0207654_10345027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300025915\|Ga0207693_11257313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300025917\|Ga0207660_10993780	Not Available	684	Open in IMG/M
3300025922\|Ga0207646_11837843	Not Available	517	Open in IMG/M
3300025927\|Ga0207687_10216470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1506	Open in IMG/M
3300025927\|Ga0207687_10520426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	995	Open in IMG/M
3300025941\|Ga0207711_11403291	Not Available	641	Open in IMG/M
3300025944\|Ga0207661_11649104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300025960\|Ga0207651_10306432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1323	Open in IMG/M
3300025961\|Ga0207712_10103030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2126	Open in IMG/M
3300025972\|Ga0207668_11132434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300025981\|Ga0207640_10337789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1205	Open in IMG/M
3300026095\|Ga0207676_10515878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1137	Open in IMG/M
3300026121\|Ga0207683_10692665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300026550\|Ga0209474_10680729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300027725\|Ga0209178_1407113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300027787\|Ga0209074_10477942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300027873\|Ga0209814_10251089	Not Available	767	Open in IMG/M
3300028293\|Ga0247662_1012446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1361	Open in IMG/M
3300028704\|Ga0307321_1056506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300028712\|Ga0307285_10157902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300028713\|Ga0307303_10059172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300028718\|Ga0307307_10244929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300028719\|Ga0307301_10142768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300028721\|Ga0307315_10010025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2336	Open in IMG/M
3300028721\|Ga0307315_10021182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1688	Open in IMG/M
3300028722\|Ga0307319_10017734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2174	Open in IMG/M
3300028744\|Ga0307318_10098697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	987	Open in IMG/M
3300028791\|Ga0307290_10218545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300028791\|Ga0307290_10291159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300028799\|Ga0307284_10270463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300028807\|Ga0307305_10412540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300028872\|Ga0307314_10149825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300028876\|Ga0307286_10180015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300028881\|Ga0307277_10322275	Not Available	687	Open in IMG/M
3300028889\|Ga0247827_11164566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300031716\|Ga0310813_11391613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300032013\|Ga0310906_10909556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300032075\|Ga0310890_10758496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300032126\|Ga0307415_100285097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1360	Open in IMG/M
3300032126\|Ga0307415_102459391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300032180\|Ga0307471_103562013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300033550\|Ga0247829_11180767	Not Available	634	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.58%
Host-Associated	Host-Associated	27.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.77%
Plants	Host-Associated → Plants	27.42%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.29%
Sediment	Environmental → Aquatic → Sediment	0.81%
Phylloplane	Host-Associated → Plants → Phylloplane	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.68%
Loam	Environmental → Terrestrial → Soil → Loam	11.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.84%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.23%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_04601711	2228664021	Soil	CGKSSDVDSPGRIVIAVDVPVTGSPYVAQTIKQGVELAAGNLNGSGGIRVGSRSYKLDVKLYDNHLSARRAVGNMRRALDAGAVAVVTDG
INPhiseqgaiiFebDRAFT_1057185311	3300000364	Soil	VRRIALLLAGLALLAAGCGKGSSRGEAGQVVIAVDVPVTGSPYVAETIRQGVELAISNVNGGGGVRVGSKSYVLKVKLYDNHLSARTAVENARRAIDAGAVAIVTAGTGVDATWQLANRA
JGI11615J12901_120558332	3300000953	Soil	VRRGLFLFVGLALLAAGCGKSSSASDLGHLTVVVDVPVTGSPYVAQTIRQGVELATANLNAGGGVRAGEKSYRLDVKLYDNHLSARQAVENTRRALDANAIVI
JGI1027J12803_1092834651	3300000955	Soil	VRRIALLLAGLALLAAGCGKGSSRGEAGQVVIAVDVPVTGSPYVAETIRQGVELAISNVNGGGGVRVGSKSYVLKVKLYDNH
JGI10216J12902_1029906892	3300000956	Soil	LRRVILVFVCFALLAAGCGKSSRASGGKIEVAVDVPVTGSPYVAQNIRHGVALAADNLNSGGGIIVGTKTYRLVPKLYDNHLSARQAVEDT
Ga0063455_1000131372	3300004153	Soil	VRRIAFLLAGLALLAAGCGKSSGAKDAAEHLVIAVDVPVTGSPYVAQTIRQGVALAASNLNGGGGMRVGSKSYELTVKLYD
Ga0062590_1019730861	3300004157	Soil	VNVGRLALLLAGLRLIAAGCGKSSGGEATGKIAIAVDVPVTGSPYVAQTIRDGVQLAADNLNGGGGIRIGDHSYRLVVKLYDNHFSA
Ga0063356_1040542562	3300004463	Arabidopsis Thaliana Rhizosphere	VNVSRLVFLLAGFALFAAGCGGSSGGEANGRIVIAVDVPVTGSPYVAQTIRHGVQLAADNLNGSGGIRIGDRSYRIAVKLYDN
Ga0062595_1003584561	3300004479	Soil	VGLCGRRTSGPPGCRLSAVRRLVLLLAGLALLAAGCGKGSSRDEAGQVVIAVDVPVTGSPYVAETIRHGVELATSNVNGGGGVRVGSKSYLLKVKLYDNHLSART
Ga0062595_1012391811	3300004479	Soil	VRRLAFLLAGLVLLAAGCGKGSSSGEAGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLVKVKL
Ga0062592_1000465401	3300004480	Soil	VRRALVLIVGLALLAAGCGGQSSSSDDLGHLTVAVDVPVTGSPYVAQTIRQGVELATSNVNGGGGVRVGSKSYLVK
Ga0062592_1024195691	3300004480	Soil	VASCGRRISGPLGCRLSAVRRLVLLLAGLALLAAGCGMGSSRDEAGQVVIAVDVPVTGSPYVAETIRQGVELATSNVNGGGGVRVGSKSYLVK
Ga0066388_1016122601	3300005332	Tropical Forest Soil	VNVSRLAPLLAGLALLAAGCGGSSGGDEATGKIVIAVDVPVTGSPYVAQTIRNGVQLAADNLNGSGGIRVGDRSYRLVVKLYDNHLSARGAVADTRRALDAGALAIV
Ga0068869_1012492322	3300005334	Miscanthus Rhizosphere	VRRLAFLLAGLALIAAGCGKSSGGDSTGRLVVAVDVPVTGSPYVAQTVRNGVQLAADNVNGSGGIRVGSRNYRLAVKLYDNHLSARQ
Ga0070680_1003209592	3300005336	Corn Rhizosphere	VRRLVIFLAGVALLAAGCGGSSTSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGKQSYMLRVKLYDN
Ga0070682_1008702052	3300005337	Corn Rhizosphere	VRRLAFLFAGLVLLAAGCGKGSSSGEAGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLVKVKLYDNHLSARTAVQNARRAIDAGAVAIV
Ga0070691_107048521	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MGLALLAAGCGKSSSSSDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIDVKLYDNH
Ga0070692_103545931	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VRRLAFLLAGLVLLAAGCGKGSSSGETGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLVKVKLYDNHLSARTAVQNARRAIDAGAVAIVTDG
Ga0070671_1005523571	3300005355	Switchgrass Rhizosphere	VRRLVIFLAGVALLAAGCGGSSTSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGKQSYMLRVKLYDNHLSARQAVEDTRRALD
Ga0070674_1009606561	3300005356	Miscanthus Rhizosphere	VRRLAFLLAGLVLLAAGCGKGSSSGEAGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLVKVKLYDNHLSARTAVQNARRAIDAGA
Ga0070694_1009656691	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VLAAGCGKSSRSSGGDVVIAVDVPVTGSPYVAQNIRHGVALAANNLNSGGGIIVGTHSYHLKVKLYDNHLSARQAVEDT
Ga0070695_1002160542	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLAASCGKSSRSSGGNVVIAVDVPVTGSPYVAQNIRHGVALAANNLNSGGGIIVGTHSYHLKVKLYDNHLSARQA
Ga0070704_1014630172	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VRRLAFLLAGLALLGAGCGGKSSSGTTGHLVIAVDVPVTGSPYAAQTIRQGVELAASNLNGGGGLRIGDKSYLLDVKLYD
Ga0058697_104685752	3300005562	Agave	VRRTLLLLVGLALLAAGCGKDSSSSDLGHLTVVVDVPVTGSPYVAQTIRQGVELATSNLNAGGGVRTGDKSYRLDVKLYDNHLSARQ
Ga0070664_1020372802	3300005564	Corn Rhizosphere	VRRLAFLLAGLALLGAGCGGKSSSGTTGHLVIAVDVPVTGSPYAAQTIRQGVELAASNLNGGGGVRIGDKSYLLEVKLYDNHLSARTAVQDTRR
Ga0066708_103120702	3300005576	Soil	VRRAILLLACVALLAAGCGKSSRASGGKIVIAVDVPVTGSPYVAQTIRNGVALAANSLNSGGGIIVGTHTYRLAVKLYDNHLSARQA
Ga0068856_1000993831	3300005614	Corn Rhizosphere	MRRTVVLLAGLALLAAGCGKAGHKSGGKVVIAVDIPVTGSPYVAQTIRQGVELATSGINSGGGLIVGDRSYQLDVKVYDNHLSARRAVEDTRSALDAGAAA
Ga0068856_1013213981	3300005614	Corn Rhizosphere	VRRLAFLLAGLALIAAGCGKSSSGDSTGRLVVAVDVPVTGSPYVAQTVRNGVQLAADNVNGSGGIRVGSRNYRLAVKLYDNHLSARQAVENMRRALD
Ga0068852_1005083641	3300005616	Corn Rhizosphere	VRRLAFLLAGLVLLAAGCGKGSSSGEAGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLVKVKLYDNHLSARTAVENARRAIDAGAVAIVT
Ga0079220_103049071	3300006806	Agricultural Soil	VRRACLLLVLVAVLAAGCGKSGRSSGGNIVIAVDVPVTGSPYIAQTIRQGVALAANNLNGGGGVIVGTHSYHLEVKLYDNHLSARQAVDDTRRALSAHAVAIV
Ga0075425_1019063541	3300006854	Populus Rhizosphere	VRRLAFLLAGLALLGAGCGGKSSSGTTGHLVIAVDVPVTGSPYAAQTIRQGVELAASNLNGGGGLRIGDKSYLLDVKLYDNHL
Ga0068865_1020079342	3300006881	Miscanthus Rhizosphere	VRRLAFLLAGLALLGAGCGGKSSSGTTGHLVIAVDVPVTGSPYAAQTIRQGVELAASNLNGGGGLRIGDKSYLLDVKLYDNHLSARTAVENARRAIDAGAVAIV
Ga0114129_117217931	3300009147	Populus Rhizosphere	VGLALLTAGCGKSSSSSDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIDVKLYDNHL
Ga0075423_114360961	3300009162	Populus Rhizosphere	VRGAILLLSGLALLVAGCGKSARASGGNIEIAVDVPVTGSPYVAENIRHGVALAANNLNSGGGIIVGNRTYRLVPKLYDNHLSARQ
Ga0126313_100063887	3300009840	Serpentine Soil	VRRLAFLLAGIALLTAGCGKSSGSKNELGRLVIAVDVPVTGSPYVAQTIRQGVELATSNLNGGGGIRVGSKSYLLTVKLYDNHLSA
Ga0126312_103246722	3300010041	Serpentine Soil	VRRLAFLLAGIALLTAGCGKSSGSKNELGRLVIAVDVPVTGSPYVAQTIRQGVELATSNLNGGGGIRVGSKSYLLTVKLYDNHLSARRAVQDARRALDAGAAAIITDG
Ga0126314_101293812	3300010042	Serpentine Soil	VRRGLFLLAALALLAAGCGKSSGSSDLGHVTVAVDVPVTGSPYIAQTIRQGLELATSNLNAGGGVRAGEKSYRLDVKLYDNHLSARQAVEDTRRALDANTVAIVTDG
Ga0126314_113578161	3300010042	Serpentine Soil	VRRLAFLLAGLALIAAGCGTSSDADSPGRIVVAVDVPVTGSPYVAQTIKQGVELAAGNLNGSGGIRVGSRSYKLDAKLYDNHLSA
Ga0126311_100520051	3300010045	Serpentine Soil	VRRLAFLLAGIALLTAGCGKSSGSKNELGRLVIAVDVPVTGSPYVAQTIRQGVELATSNLNGGGGIRVGSKSYLLTVKLYDNHLSARRAVQDARRALDAG
Ga0126384_113514001	3300010046	Tropical Forest Soil	VRRLAILLAGVALLAGGCGGSNKTATAKRLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGIRVGDQNYLLRVKLYDNHLSARQAVENARRA
Ga0126372_103849371	3300010360	Tropical Forest Soil	VRRLAILLAGVAVLAAGCGGSSKSADQKSLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGLRVGNQSYLLKVKLYDNHGSARQ
Ga0126377_102050952	3300010362	Tropical Forest Soil	VRRGLFLLVGLALLAAGCGKSSSSGDLGKLTVAVDVPVTGSPYVAQTIRQGLELATTNLNAGGGVRAGEKSYRIDVKLYDNHLSARQAVE
Ga0134128_109534231	3300010373	Terrestrial Soil	VRRLVILLAGVALLAAGCGGSSTSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGKQSYMLRVKLYDNHLS
Ga0105239_107944011	3300010375	Corn Rhizosphere	VRRLAFLLAGLALIAAGCGKSSSGDSTGRLVVAVDVPVTGSPYVAQTVRNGVQLAADNVNGSGGIRVGSRNYRLAVKLYDNHLSARQAVENM
Ga0134126_111328101	3300010396	Terrestrial Soil	MRRVVLLIACVAVLAAGCGKSSRASGGDIVVAVDVPVTGSPYVAQNIRHGVALAANNLNSGGGIIVGTHSYHLKVKLYDNHLSARQAVEDTRRALGEHAVAVVTDGT
Ga0134126_122171411	3300010396	Terrestrial Soil	VRRLAFLLAGLALLGAGCGGKSSSGTTGHLVIAVDVPVTGSPYAAQTIRQGVELAASNLNGGGGLRIGDKSYLLDVKLYDNHLSARTAVQDTRRAIDAGAVAIVTDGAGVDATWQLARRDGVSICITQD
Ga0134124_125359961	3300010397	Terrestrial Soil	VRRLVIFLAGVALLAAGCGGSSKSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGKQSYMLRVKLYDNHLSARQ
Ga0151490_15186271	3300011107	Soil	VRRTALLLAGLAVLAGGCGKSTRSPPGKIVLAVDVPVTGSPYVAQTIRNGVGLAVDRLDSGGGITVGDRKYKIAVKLYDNHLSARRAVEDTRRALAAGA
Ga0151490_18109052	3300011107	Soil	VRRLAFLLAGLVLLTAGCGKGSSSGEAGRLVIAVDVPVTGSPYVAETIRHGVELATPNLNGGGRVRVGSKSYLIKVKLYDN
Ga0137370_106855972	3300012285	Vadose Zone Soil	VRRAILLLACVGLLAAGCGESSRASGGKIVIAVDVPVTGSPYVAQTIRNGVALAANSLNSGGGIIVGTHTYRLAVKLYDNHLSARQAVED
Ga0137366_108612682	3300012354	Vadose Zone Soil	VRRAILLLACVALLAAGCGKSSRASGGKIVIAVDVPVTGSPYVAQTIRHGVALAANNLNSGGGIIVGTHTYRLAVKLYDNH
Ga0137371_103837012	3300012356	Vadose Zone Soil	VLRAILLLACVSLLATGCGESSRASGGKIVIAVDAPVTGSPYVAQTIRHGVALAANNLNAGGGIIVGTHTYRLAVKLYDNHRSAPQAVEDIRRALDAGAV
Ga0157291_101803691	3300012902	Soil	VNVSRLVFLLAGLALLAAGCGKSSGGEATGKIVIAVDVPVTGSPYVAQTIRHGVQLAAGNLNGSGGIRIGDRSYRLAVKLYDNHLSARSAVDDTRR
Ga0157302_105359471	3300012915	Soil	VGLALLASGCGKSSSSSTDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIAVKLYDNHLSARQAVENTRRALDSN
Ga0164298_106994032	3300012955	Soil	VRRLAFLLAGLVLLAAGCGKGASSGEAGRLVVAVDVPVTGSPYVADTIRQGCELATSNLNGGGGVRVGSKSYVIKVKLY
Ga0164301_103310571	3300012960	Soil	VRRLAFLLAGLVLLVAGCGKGSSSGEAGRLVIAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYVIKVKLYDNHLSARAAVQNARRAIEAGAV
Ga0164302_104868591	3300012961	Soil	VRRLAFLLAGLVLLVAGCGKGSSSGEAGRLVIAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYVIKVKLYDNHLSARAAVQNARRAIDAGAVAI
Ga0164308_107753142	3300012985	Soil	VRRLAFLLAGLVLLVAGCGKGSSSGEAGRLVIAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYVIKVKLYDNHLSARAAVQNARRAIEAGAVAIVTDG
Ga0164308_113257761	3300012985	Soil	VRRLVILLAGVALLAAGCGGSSKSSSPKNLVIGVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRAGKQSYMLRVKLYDNHLSARQAVEDTRRALDA
Ga0163162_103930332	3300013306	Switchgrass Rhizosphere	VRRLAFLLAGLVLLAAGCGKGSSSGEAGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLVKVKLYDNHLSARTAVQNAGRAIDAGA
Ga0134078_106647031	3300014157	Grasslands Soil	VRRTAVLLVALALLAGGCGKSSPKGVGKIVVAVDVPVTGSPYIAQTIRHGVELAASNLNGGGGLLVGSHRYRLVVKLYDSHLSA
Ga0173478_103010652	3300015201	Soil	VGLALLASGCGKSSSSSTDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIAVKLYDNHLSARQAVENTRRALD
Ga0132258_114303672	3300015371	Arabidopsis Rhizosphere	VYVSRLALLLAGLALLAAGCGKSSGGQATGKIVIAVDVPVTGSPYVAQTIRNGVRLAADNLNGSGGIRVGDRSYRLAVKLYDNHLSARSAVNDTRRALDANA
Ga0132256_1031671432	3300015372	Arabidopsis Rhizosphere	VRRALFVFVGLALLAAGCGGSSSSGDVGHLAVAVDVPVTGSPYIAQTIRQGVELATSTLNSGGGVRAGDKSYRLDVKLYDNHLSARQAVQDARRALDAHAV
Ga0132257_1002465121	3300015373	Arabidopsis Rhizosphere	VRRALFLLVGLALLAAGCGKSSSSGDLGHLTVAVDVPVTGSPYVAQTIRQGVELATSNLNAGGGVRAGEKSYKLDVRLYDNHLSARKAVEDTRRALDADALAIVTDGT
Ga0132255_1058752542	3300015374	Arabidopsis Rhizosphere	VYVSRLALLLAGLALLAAGCGKSSGGQATGKIVIAVDVPVTGSPYVAQTIRNGVRLAADNLNGSGGIRVGDRSYRLAVKLYDNHLS
Ga0163161_108062701	3300017792	Switchgrass Rhizosphere	VRRLAFLLAGLALIAAGCGKSSGGDSTGRLVVAVDVPVTGSPYVAQTVRNGVQLAADNVNGSGGIRVGSRNYRLAVKLYDNHLSARQAVENMRRALDAGAV
Ga0187785_105414362	3300017947	Tropical Peatland	LLAGLAVLAAGCGKSTGSPPGKIVLAVDVPVTGSPYVAQTIRNGAGLAVDRLNGGGGITVGDRKYKIVVKLYDNHLSARRAVENTRRALSAGAVAIVTDG
Ga0184620_103509242	3300018051	Groundwater Sediment	VRRLAIFLAGLALLAAGCGKSSGSENVGELVIAVDVPVTGSPYVAQTIRQGVELAASNLNGGGGVRVGSKSYRLKVKLYDNHLSARRAVQ
Ga0066669_110230481	3300018482	Grasslands Soil	VRRTVVLLVALALLGGGCGKSSPKGIGKIVVAVDVPVTVSPYIAQTIRHGVELAASNLNGGGGLLVGSHRYRLVIKLYDNHLSARSAVADTRRALDAGALALVSDGTGVDATWQL
Ga0247753_10152081	3300022892	Soil	VRRGLFLLVGLALLASGCGKSSSSSTDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIAVKLYDNHLS
Ga0247788_10883171	3300022901	Soil	VRRGLFLLVGLALLASGCGKSSSSSTDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIAVKLYDNHLSARQAVEN
Ga0247793_10070542	3300023066	Soil	VRRGLFLLVGLALLASGCGKSSSSSTDLGHLTVSVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIAVKLYDNHLSAR
Ga0247799_10513612	3300023072	Soil	VRRGLFLLVGLALLASGCGKSSSSSTDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIDVKLYDNHLSARQA
Ga0247748_10367892	3300023168	Soil	VRRGLFLLVGLALLASGCGKSSSSSTDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIAVKLYDNHLSARQAVENTRR
Ga0247800_10758622	3300023263	Soil	VRRGLFLLVGLALLASGCGKSSSSSTDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIAVKLYDNHLSARQAVENTRRALDANAIAIV
Ga0247694_10173362	3300024178	Soil	VRRLVIFLAGVALLAAGCGGSSTSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGKQGYMLRVKLYDNHLSARQGVEDTRRA
Ga0247669_10256312	3300024182	Soil	VRRLVILLAGVALLAAGCGGSSTSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGKQGYMLRVKLYDNHLSARQAVEDTRRALDAGAATIVT
Ga0247679_10513141	3300024251	Soil	VRRLVIFLAGVALLAAGCGGSSTSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRAGKQSYMLRVKLYDNHLSARQA
Ga0207653_102374292	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VRRLAFLLAGLVLLAAGCGKGSSSGETGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLVKVKLYDNHLSARTAVQNARRA
Ga0207682_103747082	3300025893	Miscanthus Rhizosphere	VRRLVILLAGVALLAAGCGGSSTSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGSKSYLIKVKLYDNHLSARTAVQNARRAIDA
Ga0207654_103450271	3300025911	Corn Rhizosphere	VRRLAFLLAGLALLGAGCGGKSSSGTTGHLVIAVDVPVTGSPYAAQTIRQGVELAASNLNGGGGLRIGDKSYLLDVKLYDNHLSARTAVQDTRRAIDAGAVA
Ga0207693_112573131	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VRRLAFLLAGLVLIAAGCGKGSSSGETGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLIKVK
Ga0207660_109937802	3300025917	Corn Rhizosphere	VRRLVIFLAGVALLAAGCGGSSTSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGKQSYMLRVKLYDNHLSARQ
Ga0207646_118378432	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VRRLAFLLAGLALIAAGCGKSSSGDSTGRLVVAVDVPVTGSPYVAQTVRNGVQLAADNVNGSGGIRVGSRNYRLAVKL
Ga0207687_102164701	3300025927	Miscanthus Rhizosphere	VRRLAFLLAGLVLLAAGCGKGSSSGEAGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLVKVKLYDNHLSAR
Ga0207687_105204262	3300025927	Miscanthus Rhizosphere	MGLALLAAGCGKSSSSSDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIDVKLYDNHLSARQAVENTRRALD
Ga0207711_114032911	3300025941	Switchgrass Rhizosphere	VLFLAGLALLAAGCGKGSSHATGQVVIAVDVPVTGSPYIAQTIRQGVELAASNLNGGGGVRIGSKSYLLRVKLYD
Ga0207661_116491041	3300025944	Corn Rhizosphere	VLFLAGLALLAAGCGKGSSHATGQVVIAVDVPVTGSPYIAQTIRQGVELAASNLNGGGGVRIGSKSYLLRVKLYDNHLSARAAVEDIRRALGAGAVTIVTDGT
Ga0207651_103064322	3300025960	Switchgrass Rhizosphere	VRRLVIFLAGVAMLASGCGGGSGSSTSAKQLVIAVDVPVTGSPYVAQTIRQGVELATSNLNGGGGVRVGDQSYLLDVKLYDN
Ga0207712_101030302	3300025961	Switchgrass Rhizosphere	VRRLAFLLAGLVLLAAGCGKGSSSGEAGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLVKVKLYDNHLSARTAVQNARRAIDAGAVAIVTDGT
Ga0207668_111324342	3300025972	Switchgrass Rhizosphere	VRRLAFLLAGLVLLAAGCGKGSSSGEAGRLVVAVDVPVTGSPYVADTIRQGVELATSNLNGGGGVRVGSKSYLIKVKLYDNHLSARTAVENARRAIDA
Ga0207640_103377892	3300025981	Corn Rhizosphere	VRRLAFLLAGLALIAAGCGKSSGGDSTGRLVVAVDVPVTGSPYVAQTVRNGVQLAADNVNGSGGIRVGSRNYRLAVKLYDNHLSARQAVENMRRALD
Ga0207676_105158781	3300026095	Switchgrass Rhizosphere	VRRLAFLLAGLALLGAGCGGKSSSGTTGHLVIAVDVPVTGSPYAAQTIRQGVELAASNLNGGGGVRIGDKSYLLEVKLYDNHLSARTA
Ga0207683_106926651	3300026121	Miscanthus Rhizosphere	VRRLAFLLAGLALLGAGCGGKSSSGTTGHLVIAVDVPVTGSPYAAQTIRQGVELAASNLNGGGGLRIGDKSYLLDVKLYDNHLS
Ga0209474_106807291	3300026550	Soil	VRRAILLLACVALLAAGFGKSSRASGGKIVIAVDVPVTGSPYVAQTIRNGVALAANSLNSGGGIIVGTHTYRLAVKLYDNHLSARQAVEDTRRAL
Ga0209178_14071132	3300027725	Agricultural Soil	VRRLVILLAGVALLAAGCGGSSKSSSPKNLVIGVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGKQSYMLRVKLYDNHLSARQAVE
Ga0209074_104779421	3300027787	Agricultural Soil	VRRLVILLAGVAVLAAGCGGSSTSSSSKNLVVAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRIGDQSYLLKVKLYDNHLSARQAVEDTRRALDAGAVTIVT
Ga0209814_102510892	3300027873	Populus Rhizosphere	VRRGLFLFVGLALLAAGCGKSSSNSSDLGHLTVAVDVPVTGSPYVAQTIRQGLELATANLNAGGGVRAGEKSYRIDVKLYDNHLSARQAVENTRRALDAN
Ga0247662_10124461	3300028293	Soil	VRRLVILLAGVALLAAGCGGSSTSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGKQGYMLRVKLYDNHLSARQAVEDTR
Ga0307321_10565062	3300028704	Soil	VRRLAFLLAGLALIAAGCGKSSGGDSTGRLVVAVDVPVTGSPYVAQTVRNGVRLATDNVNGSGGIRVGSRNYRLAVKLYDNHLSARQAVENMRR
Ga0307285_101579021	3300028712	Soil	VRRLAFLLAGLALIAAGCGKSSDADSPGRIVIAVDVPVTGSPYVAQTIKQGVELAAGNLNGSGGIRVGSRSYKLDVKLYDNHLSARR
Ga0307303_100591721	3300028713	Soil	VRRLAFFAAGLALIAAGCGKSSDADSPGRIVVAVDVPVTGSPYVAQTIKQGVELAAGNLNGSGGIRVGSRSYKLDVKLYDNHLSARRAVQDMRRALDAGAVAVVTD
Ga0307307_102449291	3300028718	Soil	VRRLAIFLAGLALLAAGCGKSSGSENVGELVIAVDVPVTGSPYVAQTIRQGVELATSNLNGGGGARVGDKSYLIKVKLYDNHLS
Ga0307301_101427682	3300028719	Soil	VRRLAFLLAGLALIVAGCGKSSDADSPGRIVIAVDVPVTGSPYVAETIKQGVELAAGNLNGSGGIRVGSRSYKLDVKLYDNHLSAR
Ga0307315_100100253	3300028721	Soil	VRRLAFLLAGLALIAAGCGKSSGGDSTGRLVVAVDVPVTGSPYVAQTVRNGVRLATDNVNGSGGIRVGSRNYRLAVKLYDNHLSARQAVENM
Ga0307315_100211822	3300028721	Soil	VRRLAFLLAGLALIAAGCGKSSDADSPGRIVIAVDVPVTGSPYVAQTIKQGVELAAGNLNGSGGIRVGSRSYKLDVKLYDNHLSARRAVENMRRA
Ga0307319_100177343	3300028722	Soil	VRRLAFLLAGIALLAAGCGKSSDSKSDVGNLVIAVDVPVSGSPYLAQTIHQGVELAASSLNAGGGIRAGDRSYLLKVKLYDNH
Ga0307318_100986971	3300028744	Soil	VHRLAFLLAGLALLAAGCGGSSGSRNDVGSLVIAVDVPVSGSPYVAQTIRQGVELAASSLNAGGGIRAGDRSYLLKVRLYDNHLSARKAVEDT
Ga0307290_102185451	3300028791	Soil	VRRLAFLLAGLALLGAGCGGKSSSGATGHLVIAVDVPVTGSPYVAQTIRQGVELATSNLNGGGGVRVGDKSYLIKVKLYDNHLSARTAVQNARRAIDAGAV
Ga0307290_102911592	3300028791	Soil	VRRGLVLVAGLLLAAGCGGKSSPGAAGRVVIAVDVPVTGSPYVAQTIRHGVELAANSVDAGGGIVVGSRNYRVAVKLYDNHLSARQAVEDTRRALDSNAVGI
Ga0307284_102704632	3300028799	Soil	VRRLAFLLAGLALIAAGCGKSSGGDSTGRLVVAVDVPVTGSPYVAQTVRNGVRLATDNVNGSGGIRVGSRNYRLAVKLYDNHLSARQAVENIRR
Ga0307305_104125401	3300028807	Soil	VRRLAFLLAGLALIAAGCGKSSGGDSTGRLVVAVDVPVTGSPYVAQTVRNGVRLATDNVNGSGGIRVGSRNYRLAVKLYDNHLSARQAVENIRRALDAG
Ga0307314_101498252	3300028872	Soil	VRRLAFLLAGLALIAAGCGKSSDADSPGRIVIAVDVPVTGSPYVAQTIKQGVELAAGNLNGSGGIRVGSRSYKLDVKLYDNHLSARRAVENMRRALDAGAVAVVTDG
Ga0307286_101800151	3300028876	Soil	VRRLAFLLAGLALIAAGCGKSSGGDSTGRLVVAVDVPVTGSPYVAQTVRNGVRLATDNVNGSGGIRVGSRNYRLAVKLYDNHLSARQAVENMRRALD
Ga0307277_103222752	3300028881	Soil	VRRLAFLLAGIALLAAGCGKSSDSKSDVGSLVIAVDVPVSGSPYLAQTIHQGVELAASSLNAGGGIRAGDRSYLLKVKLYDNHLS
Ga0247827_111645662	3300028889	Soil	VRRLALLLAVLPLLAAGCGKGSSSDEAGRLVIAVDVPVTGSPYVAQTIRQGVELATSNLNGGGGVRVGSRSYLIKVKL
Ga0310813_113916132	3300031716	Soil	VALALLVGGCGKDSPKGIGKVVIAVDVPVTGSPYIAQTIRHGVELAASNLSGGGGILVGTHRYRLVVKLYDNHL
Ga0310906_109095561	3300032013	Soil	VRRLAFLLAGLVLLVAGCGKGSSSGEAGRLVIAVDVPVTGSPYVAETIRQGVELATSNLNGGGGVRVGSKNYLIKVKLYDNHLSARTAVQNARRAIDAGAV
Ga0310890_107584961	3300032075	Soil	VRRLVIFLAGVALLAAGCGGSSKSSSPKNLVIAVDVPVTGSPYIAQTIRQGVELATSNLNGGGGVRVGKQSYMLRVKLYDNHLSARQAVEDTRRALDAGAVTIV
Ga0307415_1002850972	3300032126	Rhizosphere	VRRGLFLLAALALLAAGCGKSSGSSDLAHLTVAVDVPVTGSPYIAQTIRQGLELATSNLNAGGGVRAGEKSYRLDVKLYDNHLSARQAVEDTRRAL
Ga0307415_1024593911	3300032126	Rhizosphere	VRRGLFLLVALALLAAGCGKSAGSSDLGHLTVAVDVPVTGSPYIAQTIRQGLELATSNLNAGGGVRAGEKSYRLDVKLYDNHLSARQAVEDTR
Ga0307471_1035620132	3300032180	Hardwood Forest Soil	VSRLALLLAGLALLAAGCGKSSGGEATGKIVIAVDVPVTGSPYVAQTIRNGVQLAADNLNGSGGIRVGDRSYRLAVKLYDNHLSARSAVDDTRRALDANAL
Ga0247829_111807671	3300033550	Soil	VRRLAFLLAGLALIAAGCGKSSGGDSTGRLVVAVDVPVTGSPYVAQTVRNGVQLAADNVNGSGGIRVGSRNYRLAVKLYDNHLSARQAVENMRRALDA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068563

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences