NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F068630

Metagenome Family F068630

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068630
Family Type Metagenome
Number of Sequences 124
Average Sequence Length 61 residues
Representative Sequence AARKHGKAVAMLTDTVEGVRQMIGLGATIINYSSDAAVLRSGYASVVDEIRRTLSARS
Number of Associated Samples 112
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.83 %
% of genes near scaffold ends (potentially truncated) 91.94 %
% of genes from short scaffolds (< 2000 bps) 88.71 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.742 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(15.323 % of family members)
Environment Ontology (ENVO) Unclassified
(31.452 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(37.903 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.70%    β-sheet: 4.65%    Coil/Unstructured: 54.65%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF05977MFS_3 19.35
PF00437T2SSE 14.52
PF07690MFS_1 6.45
PF14534DUF4440 4.84
PF00294PfkB 2.42
PF00682HMGL-like 2.42
PF01966HD 2.42
PF00296Bac_luciferase 2.42
PF00483NTP_transferase 2.42
PF04909Amidohydro_2 1.61
PF09994DUF2235 1.61
PF01972SDH_sah 1.61
PF12697Abhydrolase_6 1.61
PF05157T2SSE_N 1.61
PF00561Abhydrolase_1 1.61
PF03401TctC 0.81
PF00072Response_reg 0.81
PF00989PAS 0.81
PF04392ABC_sub_bind 0.81
PF01979Amidohydro_1 0.81
PF13474SnoaL_3 0.81
PF02615Ldh_2 0.81
PF01717Meth_synt_2 0.81
PF00355Rieske 0.81
PF00672HAMP 0.81
PF08448PAS_4 0.81
PF13607Succ_CoA_lig 0.81
PF13147Obsolete Pfam Family 0.81
PF12850Metallophos_2 0.81
PF00881Nitroreductase 0.81
PF11999Ice_binding 0.81
PF02515CoA_transf_3 0.81
PF05425CopD 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 19.35
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 3.23
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 2.42
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 0.81
COG1276Putative copper export proteinInorganic ion transport and metabolism [P] 0.81
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.81
COG2055Malate/lactate/ureidoglycolate dehydrogenase, LDH2 familyEnergy production and conversion [C] 0.81
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.81
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.74 %
UnclassifiedrootN/A7.26 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101834357All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300000891|JGI10214J12806_12244266All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium685Open in IMG/M
3300000955|JGI1027J12803_102812000All Organisms → cellular organisms → Bacteria1483Open in IMG/M
3300003994|Ga0055435_10050457All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300004156|Ga0062589_100081328All Organisms → cellular organisms → Bacteria1978Open in IMG/M
3300004479|Ga0062595_100362733All Organisms → cellular organisms → Bacteria → Proteobacteria1016Open in IMG/M
3300005167|Ga0066672_10063235All Organisms → cellular organisms → Bacteria → Proteobacteria2164Open in IMG/M
3300005180|Ga0066685_10053143All Organisms → cellular organisms → Bacteria → Proteobacteria2606Open in IMG/M
3300005295|Ga0065707_10068522All Organisms → cellular organisms → Bacteria → Proteobacteria647Open in IMG/M
3300005332|Ga0066388_103244120All Organisms → cellular organisms → Bacteria → Proteobacteria831Open in IMG/M
3300005337|Ga0070682_101468616All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300005339|Ga0070660_100837632All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300005340|Ga0070689_100310851All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300005365|Ga0070688_100700874All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria784Open in IMG/M
3300005440|Ga0070705_101416885All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088580Open in IMG/M
3300005468|Ga0070707_100929468All Organisms → cellular organisms → Bacteria → Proteobacteria834Open in IMG/M
3300005530|Ga0070679_101255651All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria686Open in IMG/M
3300005552|Ga0066701_10322614All Organisms → cellular organisms → Bacteria → Proteobacteria958Open in IMG/M
3300005555|Ga0066692_10249898All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1119Open in IMG/M
3300005555|Ga0066692_10441491All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300005557|Ga0066704_10167653All Organisms → cellular organisms → Bacteria1477Open in IMG/M
3300005560|Ga0066670_10252421All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1069Open in IMG/M
3300005564|Ga0070664_101067759All Organisms → cellular organisms → Bacteria → Proteobacteria760Open in IMG/M
3300005718|Ga0068866_10971648Not Available602Open in IMG/M
3300005764|Ga0066903_100415755All Organisms → cellular organisms → Bacteria → Proteobacteria2223Open in IMG/M
3300005843|Ga0068860_101917102All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300006034|Ga0066656_10376589All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria917Open in IMG/M
3300006797|Ga0066659_10156048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1628Open in IMG/M
3300006844|Ga0075428_100344819All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300006852|Ga0075433_11343423All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria619Open in IMG/M
3300006853|Ga0075420_101459200All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300006854|Ga0075425_100601819All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1264Open in IMG/M
3300006918|Ga0079216_11620483All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300006969|Ga0075419_10189975All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1356Open in IMG/M
3300007004|Ga0079218_11845572All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria680Open in IMG/M
3300007265|Ga0099794_10438987All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300009012|Ga0066710_103672425All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300009012|Ga0066710_103723229All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium573Open in IMG/M
3300009100|Ga0075418_11736566All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300009137|Ga0066709_102476682All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300009137|Ga0066709_102476683All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300009157|Ga0105092_10077098All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1810Open in IMG/M
3300010046|Ga0126384_11917492All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300010336|Ga0134071_10467318All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium648Open in IMG/M
3300010336|Ga0134071_10489661All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium634Open in IMG/M
3300010362|Ga0126377_11137605All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300010362|Ga0126377_13261302All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium524Open in IMG/M
3300010398|Ga0126383_12268709All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300010399|Ga0134127_10621856All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1111Open in IMG/M
3300012189|Ga0137388_10513560Not Available1113Open in IMG/M
3300012189|Ga0137388_10692106All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300012198|Ga0137364_10642410All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium800Open in IMG/M
3300012199|Ga0137383_10299195All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300012202|Ga0137363_10188125All Organisms → cellular organisms → Bacteria1648Open in IMG/M
3300012203|Ga0137399_11021616All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300012206|Ga0137380_11599596All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300012207|Ga0137381_10566452All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300012354|Ga0137366_10144801All Organisms → cellular organisms → Bacteria1790Open in IMG/M
3300012360|Ga0137375_10603569All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_2_68_8913Open in IMG/M
3300012361|Ga0137360_10151015Not Available1841Open in IMG/M
3300012918|Ga0137396_10055414All Organisms → cellular organisms → Bacteria → Proteobacteria2731Open in IMG/M
3300012918|Ga0137396_10564748All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium842Open in IMG/M
3300012923|Ga0137359_11274805All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria623Open in IMG/M
3300012929|Ga0137404_10066349All Organisms → cellular organisms → Bacteria → Proteobacteria2817Open in IMG/M
3300012948|Ga0126375_10516182All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300012971|Ga0126369_12177241All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300012976|Ga0134076_10603673All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium513Open in IMG/M
3300014157|Ga0134078_10058164All Organisms → cellular organisms → Bacteria1357Open in IMG/M
3300014271|Ga0075326_1036489All Organisms → cellular organisms → Bacteria → Proteobacteria1271Open in IMG/M
3300014302|Ga0075310_1065938All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria725Open in IMG/M
3300015372|Ga0132256_100407429All Organisms → cellular organisms → Bacteria1462Open in IMG/M
3300015372|Ga0132256_100683039Not Available1142Open in IMG/M
3300015373|Ga0132257_102878424All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300017659|Ga0134083_10284344All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium698Open in IMG/M
3300018054|Ga0184621_10089017All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1081Open in IMG/M
3300018059|Ga0184615_10053854All Organisms → cellular organisms → Bacteria2240Open in IMG/M
3300018063|Ga0184637_10559014All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium656Open in IMG/M
3300018075|Ga0184632_10108954All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1216Open in IMG/M
3300018075|Ga0184632_10421627All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium557Open in IMG/M
3300018077|Ga0184633_10460836All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria625Open in IMG/M
3300018078|Ga0184612_10116395All Organisms → cellular organisms → Bacteria1399Open in IMG/M
3300018422|Ga0190265_12482145All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria617Open in IMG/M
3300018433|Ga0066667_10137905All Organisms → cellular organisms → Bacteria1698Open in IMG/M
3300021078|Ga0210381_10301701All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria578Open in IMG/M
3300021081|Ga0210379_10238161All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria789Open in IMG/M
3300025167|Ga0209642_10637732All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300025289|Ga0209002_10658364All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria554Open in IMG/M
3300025560|Ga0210108_1045049All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300025919|Ga0207657_10635949All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria831Open in IMG/M
3300025921|Ga0207652_10964797All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria751Open in IMG/M
3300025933|Ga0207706_11277178All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria607Open in IMG/M
3300025935|Ga0207709_10116442All Organisms → cellular organisms → Bacteria1797Open in IMG/M
3300025938|Ga0207704_11002865All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300025972|Ga0207668_11844307All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium545Open in IMG/M
3300026285|Ga0209438_1046930All Organisms → cellular organisms → Bacteria1426Open in IMG/M
3300026310|Ga0209239_1294206All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300026330|Ga0209473_1109847All Organisms → cellular organisms → Bacteria1148Open in IMG/M
3300026335|Ga0209804_1005328All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7276Open in IMG/M
3300026335|Ga0209804_1286472All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300026532|Ga0209160_1024676All Organisms → cellular organisms → Bacteria3928Open in IMG/M
3300027722|Ga0209819_10352542All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria503Open in IMG/M
3300027846|Ga0209180_10024062All Organisms → cellular organisms → Bacteria → Proteobacteria3242Open in IMG/M
3300027846|Ga0209180_10733154All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300027886|Ga0209486_11270786All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria508Open in IMG/M
3300028536|Ga0137415_11213060All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium570Open in IMG/M
3300028592|Ga0247822_10673339All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria834Open in IMG/M
3300028597|Ga0247820_10120406All Organisms → cellular organisms → Bacteria1612Open in IMG/M
3300028885|Ga0307304_10558598All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium528Open in IMG/M
3300031548|Ga0307408_100571983All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300031562|Ga0310886_10785778All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium598Open in IMG/M
3300031576|Ga0247727_11182272Not Available514Open in IMG/M
3300031820|Ga0307473_10816357All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300031947|Ga0310909_10458796All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300031949|Ga0214473_10913904All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria935Open in IMG/M
3300032002|Ga0307416_102109808All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium665Open in IMG/M
3300032179|Ga0310889_10118091All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300032179|Ga0310889_10569271All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium581Open in IMG/M
3300032205|Ga0307472_102685667All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium508Open in IMG/M
3300032828|Ga0335080_10709643All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300033004|Ga0335084_10000741All Organisms → cellular organisms → Bacteria28756Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil15.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil14.52%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.45%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.84%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.03%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.23%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.42%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.42%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.42%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.61%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.61%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.61%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.61%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.61%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.61%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.81%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014271Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2EnvironmentalOpen in IMG/M
3300014302Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300025167Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025289Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2EnvironmentalOpen in IMG/M
3300025560Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031576Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10183435723300000364SoilHGKAVAMLTDTPEGVRQMISLGATIINYSSDAAVLRSGYASVVDEIRRTVPRA*
JGI10214J12806_1224426613300000891SoilPCRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG*
JGI1027J12803_10281200023300000955SoilARKHGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSVYASVVEEIRRT*
Ga0055435_1005045723300003994Natural And Restored WetlandsRRLVEAARKYGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSVYASVVEEIRRT*
Ga0062589_10008132833300004156SoilRRRLVDACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG*
Ga0062595_10036273313300004479SoilRRRLVEAARKHGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSVYASVVEEIRRA*
Ga0066672_1006323523300005167SoilVLDEHRRRLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASTVEEIRRALPARS*
Ga0066680_1053614823300005174SoilAQRQVLDEHRRRLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASAVEEIRRALPARS*
Ga0066688_1052373713300005178SoilAQRQVLDEHRRRLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASTVEEIRRALPARS*
Ga0066685_1005314323300005180SoilVLDEHRRRLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASAVEEIRRALPARS*
Ga0065707_1006852223300005295Switchgrass RhizosphereLDEHRRRLVTAARKNGKTVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASVVDEIRRALPPRG*
Ga0066388_10324412023300005332Tropical Forest SoilLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASVVDEIRRALPPRT*
Ga0070682_10146861613300005337Corn RhizosphereKQRDVLNEYRRRLVDACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG*
Ga0070660_10083763213300005339Corn RhizosphereNEYRRRLVDACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG*
Ga0070689_10031085123300005340Switchgrass RhizosphereRRHGKGVAMLTDSVEGVREMIALGATLINYSSDAAVLRSGYASLVGSIRRNH*
Ga0070688_10070087413300005365Switchgrass RhizosphereCRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG*
Ga0070705_10141688513300005440Corn, Switchgrass And Miscanthus RhizosphereRRLVEAARKHGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSVYASVVEEIRRT*
Ga0070707_10092946813300005468Corn, Switchgrass And Miscanthus RhizosphereAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASAVEEIRRALPARS*
Ga0070679_10125565113300005530Corn RhizosphereKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG*
Ga0066701_1032261423300005552SoilAARKHGKAVAMLTDSVEGVRQMIGLGATIINYASDATVLRAGYASAVDEIRRALSSRS*
Ga0066692_1024989823300005555SoilAARKHGKAVAMLTDTVEGVRQMIGLGATIINYSSDAAVLRSGYASVVDEIRRTLSARS*
Ga0066692_1044149123300005555SoilSVLAEYRARVAEAARKHRKQVAMLTDSVEGVREMIALGATIINYSSDASVLRAGYAAIAAEVRRGK*
Ga0066704_1016765313300005557SoilRKHGKAVAMLTDSVEGVRQMIALGATIINYSSDAAVLRSSYAAIAEEIRRSAPANR*
Ga0066670_1025242113300005560SoilYRQRLAAAARKHGKHVAMITDSLEGVREMIDLGATIINYSSDAAVLRAGYASIAVEVRRGARG*
Ga0070664_10106775913300005564Corn RhizosphereARKHGKAVAMLTDSAEGVRRMIELGATIINYSSDAAVLRASYASTVQEIRRALPARS*
Ga0070702_10042614423300005615Corn, Switchgrass And Miscanthus RhizosphereRHGKGVAMLTDSVEGVREMIALGATLINYSSDAAVLRSGYASLVGSIRRNH*
Ga0068866_1097164813300005718Miscanthus RhizosphereYRQRLAAAARKHNKAVAMITDSVEGVREMIALGATIINYSSDTAILRAGYASMLEAIKTRA*
Ga0066903_10041575513300005764Tropical Forest SoilHGKAVAMLTDTAEGVRQMISLGATIINYSSDAAVLRSGYASVVDEIRRTVPRA*
Ga0068860_10191710213300005843Switchgrass RhizosphereEYRRRLVDACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG*
Ga0066656_1037658933300006034SoilRVRLAEAARKHGKAVSMAIDSVEGVREMIALGATIVNYSSDTAVLRSGYAAAIEEIRRPAAKR*
Ga0066659_1015604833300006797SoilVLDEHRRRLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYAS
Ga0075428_10034481933300006844Populus RhizosphereLVEACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG*
Ga0075433_1134342313300006852Populus RhizosphereEAARKHGKAVAMLTDSVEGVREMIALGATIINYASDAAVLRSTYASVVGEIRRPAPAGR*
Ga0075420_10145920023300006853Populus RhizosphereACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYAAAVAEIRRPAAPRG*
Ga0075425_10060181913300006854Populus RhizosphereTLTGYRKRLAAAARKHGKQVAMITDSVEGVREMIELGATIINYSSDAAVLRAGYAGVAAEVRRPPRG*
Ga0079216_1162048313300006918Agricultural SoilPKQRDVLNEHRRRLVEACRKQGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYAAAVAAIRAPAPRG*
Ga0075419_1018997513300006969Populus RhizosphereRLAAAARKHGKQVAMITDSLEGVREMIALGATIINYSSDAAVLRAGYAAIAAEVRRAARG
Ga0079218_1184557223300007004Agricultural SoilRLVEAARKHGKAVAMLTDSMQGVREMIALGATIINYSSDAAVLRAGYAAVAADVRKSG*
Ga0099794_1043898723300007265Vadose Zone SoilAARKHGKAVAMLTDSAEGVRRMIELGATIINYSSDAAVLRASYASTVQEIRRALPART*
Ga0066710_10367242513300009012Grasslands SoilNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASTVEEIRRALPARS
Ga0066710_10372322913300009012Grasslands SoilLAEYRARVAEAARKHRKQVEMLTDSVEGVREMIALGATIINYSSDANVLRAGYAGIAEEVRRASQRPK
Ga0075418_1173656613300009100Populus RhizosphereLDEHRRRLVTAARKNGKTVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASVVDEIHRALPPRG*
Ga0066709_10247668213300009137Grasslands SoilNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASAVEEIRRALPARS*
Ga0066709_10247668313300009137Grasslands SoilNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASTVEEIRRALPARS*
Ga0105092_1007709833300009157Freshwater SedimentEACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYAAAVAEIRRPTPPRG*
Ga0126384_1191749213300010046Tropical Forest SoilPAQRQVLDEHRRRLVTAARKNGKTVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASVVDEIRRALPPRT*
Ga0134071_1046731813300010336Grasslands SoilARKHGKAVAMLTDTVEGVREMIGLGATIINYSSDAAVLRSGYASVVGEIRRTLSARS*
Ga0134071_1048966113300010336Grasslands SoilAALDEHRRHLVAAARKHRKAVAMLTDTAEGVRQMISLGATIINYSSDAAVLRSGYASVVDEIRRTVPRS*
Ga0126377_1113760513300010362Tropical Forest SoilRRLVEAARKHGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSAYASVVEEIRRT*
Ga0126377_1326130213300010362Tropical Forest SoilRLVEASRRHGKGVAMLTDPVEGVREMISLGVTLINYASDTAVLHAGYASVVTAIRRH*
Ga0126383_1226870923300010398Tropical Forest SoilEHRRRLVDAARKHGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSAYASVVEEIRRA*
Ga0134127_1062185623300010399Terrestrial SoilYRRRLVDACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAAIRAPAARG*
Ga0137388_1051356023300012189Vadose Zone SoilDEYRRRLVAAAVKHGKAVAMITDSVEGVRQMIAVGATITNYGSDAGVLRSTYASVVEEIRRAQPARSA*
Ga0137388_1069210613300012189Vadose Zone SoilQRQVLDEHRRRLVTAARKNGKAVAMLTDSVEGVRQMVALGATIINYSSDASVLRAGYASAVDEIRRTLTARS*
Ga0137364_1064241013300012198Vadose Zone SoilARKHGKAVAMLTDSVEGVRQMIALGATIINYSSDAAVLRSSYAAIAEEIRRSAPANR*
Ga0137383_1029919513300012199Vadose Zone SoilRRRLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASAVEEIRRALPARS*
Ga0137363_1018812523300012202Vadose Zone SoilDEHRRRLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASAVEEIRRALPARS*
Ga0137399_1102161613300012203Vadose Zone SoilLRDYRVRLAEAARKHGKAVSMAIDSVEGVREMIALGATIVNYSSDTAVLRSGYARAIEEIRRPTAAHTR*
Ga0137380_1159959613300012206Vadose Zone SoilRRLVDAARKRGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSVYASVVEEIRRT*
Ga0137381_1056645213300012207Vadose Zone SoilRRLVDAARKHGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSVYASVVEEIRRT*
Ga0137366_1014480133300012354Vadose Zone SoilRRRLVAAARKHGKAVAMITDSVEGVRQMIALGATIINYASDTGVLRSGYASVVEEIRRGLPAGRT*
Ga0137375_1060356913300012360Vadose Zone SoilDAARKHGKAVAMLTDTVEGVRQMIGLGATIINYSSDAAVLRSGYASVVDEIRRTLSARS*
Ga0137360_1015101513300012361Vadose Zone SoilKAVAMLTDSVECVRQMIALGATIINYSSDAAVLRSSYAAIAEEIRRSAPANR*
Ga0137396_1005541433300012918Vadose Zone SoilARKHGKAVAMITDSVEGVRQMIDVGATIINYGSDAGVLRSGYASVVEEIRRGLPARRT*
Ga0137396_1056474813300012918Vadose Zone SoilGKAVAMLTDSVDGVRQMITLGATIINYSSDAAVLRGSYASTVDEIRRSVPASR*
Ga0137359_1127480523300012923Vadose Zone SoilSMAVDSVETVREMIVMGATIVNFSSETAVLRAGYATAVAEIRRPLTARA*
Ga0137404_1006634913300012929Vadose Zone SoilRRLVAAAVKHGKAVAMITDSVEGARQMIAVGATIINYGSDAGVLRSTYASVVEEIRRAQPARSA*
Ga0126375_1051618223300012948Tropical Forest SoilTAARKHGKAVAMLTDTADGVRQMIGLGATIINYSSDAAVLRSGYASVVDEIRRTVPRA*
Ga0126369_1217724123300012971Tropical Forest SoilGYRRRLAEAARKHGKQVAMITDSLEGVREMIGLGATIINYSSDAAVLRAGYAAVATEVRRGARG*
Ga0134076_1060367323300012976Grasslands SoilDYRVRLAEAARKHGKAVSMATDSVEGVREMIALGATIVNYSSDTAVLRSGYAAAIEEIRRPAAKR*
Ga0134078_1005816413300014157Grasslands SoilKHGKAVSMAIDSVEGVREMIALGATIVNYSSDTAVLRSGYAAAIEEIRRPAAKR*
Ga0075326_103648923300014271Natural And Restored WetlandsMNEYRRRLVEACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYAAAVAEIRRPTVPRG*
Ga0075310_106593823300014302Natural And Restored WetlandsARKHGKAVAMLTDSIEGVREMIALGATIINYASDAAVLRAGYAAVVADLRTSA*
Ga0132256_10040742913300015372Arabidopsis RhizosphereTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASVVDEIRRALPPPG*
Ga0132256_10068303943300015372Arabidopsis RhizosphereRLVEAARKHGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSVYASVVEEIRRT*
Ga0132257_10287842413300015373Arabidopsis RhizosphereAARKHGKAVAMLTDSAEGVRRMIELGATIINYSSDAAVLRASYASTVQEIRRALPARS*
Ga0134083_1028434423300017659Grasslands SoilAARKHGKAVAMLTDSVDGVRQMIALGATIINYSSDAAVLRGSYASTVDEIRRSVPASR
Ga0184638_117956613300018052Groundwater SedimentKAVAMLTDTVEGVRQMIGLGATIINYSSDAAVLRSGYASVVDEIRRTLSARS
Ga0184621_1008901713300018054Groundwater SedimentGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIHRAPAARG
Ga0184615_1005385433300018059Groundwater SedimentRLVAAARKHGKAVAMLTDSVEGVRQMIALGATIINYGSDAGVLRSTYASVVEEIRRGLPARRA
Ga0184637_1055901413300018063Groundwater SedimentDAARKHGKAVAMLTDTVEGVRQMIGLGATIINYSSDAAVLRSGYASVVDEIRRTLSARS
Ga0184632_1010895413300018075Groundwater SedimentAARKHGKAVAMLTDTVEGVRQMIGLGATIINYSSDAAVLRSGYASVVDEIRRTLSARS
Ga0184632_1042162713300018075Groundwater SedimentAARKHGKAVAMLTDTVEGVRQMIGLGATIINYSSDAAVLRSSYASVVDEIRRTLSARS
Ga0184633_1046083623300018077Groundwater SedimentAHRPRLGDAARKHGKALAMLTDNVEGVREMIALGATIINYSSDAAVLRASYASVVDEIRRARG
Ga0184612_1011639523300018078Groundwater SedimentVIDEHRRQLVEAAQRHGKAVAMLTDSVDGVRRMVAPGATIVNYASDAAVLRAGYESVVAAIRRLP
Ga0190265_1248214513300018422SoilAEHRQRLAGAARKHGKALAMLTDSVAGVREMIALGATIVNYSSDAGVLRSTYASVVDEIRRSPAPPARG
Ga0066667_1013790533300018433Grasslands SoilVLDEHRRRLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASTVEEIRRALPARS
Ga0210381_1030170113300021078Groundwater SedimentLNEYRRRLVEACRKHGKVVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYAAAVAEIRRPLAARA
Ga0210379_1023816123300021081Groundwater SedimentQDLGVLGTPKQRDVLNEYRRRLVEACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRPPAARG
Ga0209642_1063773223300025167SoilPAQRAVLDEHRRRPRKHGKAVAMLTDSVEGVRQMIAVGATIINYGSDAGVLRSTYASVVEEIRRGLPVRRT
Ga0209002_1065836423300025289SoilVSMAIDTVEGVREMIALGATIVNYASDTAVLRSGFATAVAEIRRAPAARG
Ga0210108_104504923300025560Natural And Restored WetlandsRRLVEAARKYGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSVYAAVVEEMRRT
Ga0207657_1063594913300025919Corn RhizosphereNEYRRRLVDACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG
Ga0207652_1096479713300025921Corn RhizosphereKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG
Ga0207706_1127717813300025933Corn RhizosphereRRHGKGVAMLTDSVEGVREMIALGATLINYSSDAAVLRSGYASLVGSIRRNH
Ga0207709_1011644213300025935Miscanthus RhizosphereAEACRKHSKAVAMITDSVEGVREMIGLGATIINYSSDTAILRAGYAAMVDAVKKQPGA
Ga0207704_1100286513300025938Miscanthus RhizosphereACRKHSKAVAMITDSVEGVREMIGLGATIINYSSDTAILRAGYAAMVDAVKKQPGA
Ga0207668_1184430713300025972Switchgrass RhizosphereRKHGKAVAMITDSVDGVREMIELGATIINYSSDTAILRAGYAAMVEAVKARPGA
Ga0209438_104693013300026285Grasslands SoilTAARKHGKAVAMLTDSAEGVRRMIELGATIINYSSDAAVLRASYASTVQEIRRALPARP
Ga0209239_129420613300026310Grasslands SoilYRVRLAEAARKHGKAVSMAIDSVEGVREMIALGATIVNYSSDTAVLRSGYAAAIEEIRRPAAKR
Ga0209473_110984723300026330SoilRKHGKAVAMLTDSVAGVREMIALGATIVNYASDAAVLRNGYAALVAEVRR
Ga0209804_100532863300026335SoilVLDEHRRRLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRAGYASAVEEIRRALPARS
Ga0209804_128647223300026335SoilRKHGKAVAMLTDSVEGVRQMVALGATIINYSSDAAVLRAGYAAIAADVRRGPRG
Ga0209160_102467643300026532SoilARKHGKAVAMLTDSVEGVRQMIALGATIINYSSDAAVLRSSYAAIAEEIRRSAPANR
Ga0209819_1035254213300027722Freshwater SedimentEACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYAAAVAEIRRPTPPRG
Ga0209180_1002406213300027846Vadose Zone SoilLAEAARKHGKAVSMAIDSVEGVREMIALGATIVNYSSDTAVLRSGYARAIEEIRRPAAAK
Ga0209180_1073315413300027846Vadose Zone SoilEAARKHGKAVSMAIDSVEGVREMIALGATIVNYSSDTAVLRSGYARAIEEIRRPAAVKR
Ga0209486_1127078613300027886Agricultural SoilGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYAAAVAAIRAPAPRG
Ga0137415_1121306023300028536Vadose Zone SoilVAAARKNGKAVAMLTDTVEGVRQMIGLGATIINYSSDAAVLRSGYASVVDEIRRTLSARS
Ga0247822_1067333923300028592SoilPKQRDVLNDYRRRLVEACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYAAAVAEIRRPAAPRG
Ga0247820_1012040653300028597SoilQRLAEACRKHGKAVAMITDSVDGVREMIELGATIINYSSDTAILRAGYAAMVEAVKARPG
Ga0307304_1055859823300028885SoilVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG
Ga0307408_10057198313300031548RhizosphereARKRGKAVAMLADSVEGVREMVALGATIINYSSDAAVLRAGYAAIADEVRRAR
Ga0310886_1078577823300031562SoilRDVLNEYRRRLVDACRKHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG
Ga0247727_1118227223300031576BiofilmKHVAMIADGLESAREMIAMGATIINYSSDTAVLRAGYATAVDELRRAAPGR
Ga0307473_1081635723300031820Hardwood Forest SoilKHGKQVAMITDSADGVREMIELGATIINYSSDAAVLRAGYAAIAAEVRRGARD
Ga0310909_1045879623300031947SoilEAARKHGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSAYASVVEEIRRT
Ga0214473_1091390413300031949SoilLNEHRRRLVEACRKHGKAVSMAVDSVEAVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG
Ga0307416_10210980823300032002RhizosphereAKKHGKQVAMITDSVEGVREMIALGATIVNYASDAAVLRAGYATVAEEVRIPRPPR
Ga0310889_1011809123300032179SoilQVLDEHRRRLVTAARKNGKAVAMLTDSAEGVKQMISLGATIINYSSDAAVLRSGYASVVDEIRRALPPRG
Ga0310889_1056927113300032179SoilHGKAVSMAVDSVETVREMIAMGATIVNFSSETAVLRAGYATAVAEIRRAPAARG
Ga0307472_10268566713300032205Hardwood Forest SoilRRLVDAARKHGKAVAMITDSVEGVRQMIALGATIINYSSDTAALRSVYASVVEEIRRT
Ga0335080_1070964313300032828SoilRKHGKAVAMISDSVAGVREMIELGATIINYSSDTAILRAGYAAMVEAIKTKPGA
Ga0335084_10000741263300033004SoilVAAARKHGKAVAMIADSVESVRQMIALGATIINYASDAGVLRAGYASVVEEIRRSFPATR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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