Metagenome / Metatranscriptome Family F068709

Basic Information
Family ID	F068709
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	75 residues
Representative Sequence	MASKNKLLVALLAVAVAAAFGLADNASAAKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYKL
Number of Associated Samples	101
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.20 %
% of genes near scaffold ends (potentially truncated)	22.58 %
% of genes from short scaffolds (< 2000 bps)	84.68 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Bacteria (65.323 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.677 % of family members)
Environment Ontology (ENVO)	Unclassified (24.194 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.097 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.43% β-sheet: 0.00% Coil/Unstructured: 47.57%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00583	Acetyltransf_1	15.32
PF07681	DoxX	9.68
PF03976	PPK2	4.84
PF04392	ABC_sub_bind	3.23
PF00484	Pro_CA	3.23
PF00293	NUDIX	2.42
PF00857	Isochorismatase	2.42
PF13561	adh_short_C2	1.61
PF13302	Acetyltransf_3	1.61
PF07080	DUF1348	1.61
PF01988	VIT1	1.61
PF01144	CoA_trans	0.81
PF13392	HNH_3	0.81
PF13474	SnoaL_3	0.81
PF04879	Molybdop_Fe4S4	0.81
PF08332	CaMKII_AD	0.81
PF01546	Peptidase_M20	0.81
PF16576	HlyD_D23	0.81
PF05661	DUF808	0.81
PF01740	STAS	0.81
PF13185	GAF_2	0.81
PF13416	SBP_bac_8	0.81
PF00871	Acetate_kinase	0.81
PF13533	Biotin_lipoyl_2	0.81
PF13531	SBP_bac_11	0.81
PF13343	SBP_bac_6	0.81
PF12833	HTH_18	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	9.68
COG4270	Uncharacterized membrane protein	Function unknown [S]	9.68
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	4.84
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	3.23
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.23
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	2.42
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.42
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	1.61
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	1.61
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	1.61
COG0282	Acetate kinase	Energy production and conversion [C]	0.81
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.81
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.81
COG2354	Membrane protein MutK/YedI, may be involved in DNA repair	Replication, recombination and repair [L]	0.81
COG3426	Butyrate kinase	Energy production and conversion [C]	0.81
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.81
COG4875	Protein kinase association domain CaMKII_AD, NTF2-like superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.32 %
Unclassified	root	N/A	34.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.32 %
Unclassified	root	N/A	34.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.32 %
Unclassified	root	N/A	34.68 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.23 %
Unclassified	root	N/A	34.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.90 %
Unclassified	root	N/A	34.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.81 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.48 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.45 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.68 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004024\|Ga0055436_10030896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1369	Open in IMG/M
3300004114\|Ga0062593_101574931	Not Available	712	Open in IMG/M
3300004114\|Ga0062593_102887904	Not Available	549	Open in IMG/M
3300004156\|Ga0062589_100356106	All Organisms → cellular organisms → Bacteria → Proteobacteria	1164	Open in IMG/M
3300004479\|Ga0062595_100651908	Not Available	833	Open in IMG/M
3300004479\|Ga0062595_101028551	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005093\|Ga0062594_101389765	Not Available	712	Open in IMG/M
3300005163\|Ga0066823_10078290	Not Available	646	Open in IMG/M
3300005168\|Ga0066809_10076312	Not Available	789	Open in IMG/M
3300005218\|Ga0068996_10120626	Not Available	615	Open in IMG/M
3300005332\|Ga0066388_108063086	Not Available	526	Open in IMG/M
3300005334\|Ga0068869_101247670	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300005339\|Ga0070660_101689695	Not Available	539	Open in IMG/M
3300005340\|Ga0070689_101671648	Not Available	579	Open in IMG/M
3300005353\|Ga0070669_100278130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1340	Open in IMG/M
3300005354\|Ga0070675_101841664	Not Available	558	Open in IMG/M
3300005439\|Ga0070711_100155398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1729	Open in IMG/M
3300005458\|Ga0070681_10269544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1614	Open in IMG/M
3300005547\|Ga0070693_100144078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1503	Open in IMG/M
3300005615\|Ga0070702_100928208	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300005764\|Ga0066903_102974242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300005937\|Ga0081455_10004998	All Organisms → cellular organisms → Bacteria	14665	Open in IMG/M
3300005937\|Ga0081455_10566459	Not Available	748	Open in IMG/M
3300006028\|Ga0070717_10643659	Not Available	962	Open in IMG/M
3300006041\|Ga0075023_100064240	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300006042\|Ga0075368_10196730	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300006047\|Ga0075024_100078057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1422	Open in IMG/M
3300006048\|Ga0075363_100305918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300006048\|Ga0075363_100853427	Not Available	556	Open in IMG/M
3300006057\|Ga0075026_100014050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3494	Open in IMG/M
3300006057\|Ga0075026_100156494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1173	Open in IMG/M
3300006755\|Ga0079222_10007930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3693	Open in IMG/M
3300006806\|Ga0079220_10790734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300006852\|Ga0075433_11028432	Not Available	717	Open in IMG/M
3300006881\|Ga0068865_101847777	Not Available	546	Open in IMG/M
3300006954\|Ga0079219_10479301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300009101\|Ga0105247_10433097	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300009176\|Ga0105242_12058805	Not Available	614	Open in IMG/M
3300010046\|Ga0126384_11055721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	742	Open in IMG/M
3300010358\|Ga0126370_10163228	All Organisms → cellular organisms → Bacteria → Proteobacteria	1640	Open in IMG/M
3300010360\|Ga0126372_10901500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	887	Open in IMG/M
3300010373\|Ga0134128_10440445	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300010396\|Ga0134126_10126913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3112	Open in IMG/M
3300010396\|Ga0134126_11040668	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300010400\|Ga0134122_11742788	Not Available	652	Open in IMG/M
3300012511\|Ga0157332_1011708	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300012513\|Ga0157326_1039780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300012951\|Ga0164300_11208637	Not Available	501	Open in IMG/M
3300012955\|Ga0164298_10423236	Not Available	868	Open in IMG/M
3300012955\|Ga0164298_11009490	Not Available	615	Open in IMG/M
3300012957\|Ga0164303_11289656	Not Available	540	Open in IMG/M
3300012961\|Ga0164302_10015378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3158	Open in IMG/M
3300012961\|Ga0164302_10170216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1306	Open in IMG/M
3300013306\|Ga0163162_12401826	Not Available	606	Open in IMG/M
3300014321\|Ga0075353_1074270	Not Available	752	Open in IMG/M
3300014324\|Ga0075352_1026631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1249	Open in IMG/M
3300015371\|Ga0132258_11510829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1696	Open in IMG/M
3300015371\|Ga0132258_11737573	All Organisms → cellular organisms → Bacteria → Proteobacteria	1573	Open in IMG/M
3300015372\|Ga0132256_100211841	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300015372\|Ga0132256_100792114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1064	Open in IMG/M
3300015372\|Ga0132256_101248493	Not Available	856	Open in IMG/M
3300015372\|Ga0132256_103924163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	500	Open in IMG/M
3300015374\|Ga0132255_100358234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2114	Open in IMG/M
3300015374\|Ga0132255_103705378	Not Available	650	Open in IMG/M
3300017792\|Ga0163161_10333207	All Organisms → cellular organisms → Bacteria → Proteobacteria	1202	Open in IMG/M
3300017792\|Ga0163161_10725172	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300017939\|Ga0187775_10044728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1329	Open in IMG/M
3300017939\|Ga0187775_10060945	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300017944\|Ga0187786_10109892	Not Available	942	Open in IMG/M
3300017947\|Ga0187785_10000446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15371	Open in IMG/M
3300017947\|Ga0187785_10687468	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300017959\|Ga0187779_10000988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18228	Open in IMG/M
3300018029\|Ga0187787_10084124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	997	Open in IMG/M
3300018032\|Ga0187788_10023274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1986	Open in IMG/M
3300018032\|Ga0187788_10076635	All Organisms → cellular organisms → Bacteria → Proteobacteria	1176	Open in IMG/M
3300021478\|Ga0210402_10737547	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300021560\|Ga0126371_11781367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	738	Open in IMG/M
3300025560\|Ga0210108_1067593	Not Available	695	Open in IMG/M
3300025912\|Ga0207707_10528458	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300025920\|Ga0207649_10608504	Not Available	841	Open in IMG/M
3300025922\|Ga0207646_10182822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1894	Open in IMG/M
3300025923\|Ga0207681_10190412	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300025930\|Ga0207701_10269526	All Organisms → cellular organisms → Bacteria → Proteobacteria	1483	Open in IMG/M
3300025931\|Ga0207644_10625126	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300025933\|Ga0207706_10086024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2763	Open in IMG/M
3300025960\|Ga0207651_11111624	Not Available	708	Open in IMG/M
3300025961\|Ga0207712_10740932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	860	Open in IMG/M
3300026067\|Ga0207678_10473172	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300026319\|Ga0209647_1202518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300026344\|Ga0256800_1001197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1048	Open in IMG/M
3300027866\|Ga0209813_10235893	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300027894\|Ga0209068_10046195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2199	Open in IMG/M
3300027907\|Ga0207428_10123146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1987	Open in IMG/M
3300027910\|Ga0209583_10033605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1719	Open in IMG/M
3300027915\|Ga0209069_10060637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1787	Open in IMG/M
3300030916\|Ga0075386_11059628	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300031057\|Ga0170834_100950568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1869	Open in IMG/M
3300031122\|Ga0170822_16857517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1251	Open in IMG/M
3300031455\|Ga0307505_10509982	Not Available	580	Open in IMG/M
3300031820\|Ga0307473_10055140	All Organisms → cellular organisms → Bacteria → Proteobacteria	1908	Open in IMG/M
3300031913\|Ga0310891_10321460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300031944\|Ga0310884_10607806	Not Available	654	Open in IMG/M
3300032000\|Ga0310903_10136091	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092	Open in IMG/M
3300032003\|Ga0310897_10369981	Not Available	672	Open in IMG/M
3300032174\|Ga0307470_10303790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1084	Open in IMG/M
3300032770\|Ga0335085_11826958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300032828\|Ga0335080_10006813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11818	Open in IMG/M
3300033004\|Ga0335084_10077536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3445	Open in IMG/M
3300033412\|Ga0310810_10116885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3154	Open in IMG/M
3300033412\|Ga0310810_11135890	Not Available	644	Open in IMG/M
3300033433\|Ga0326726_10191689	Not Available	1883	Open in IMG/M
3300033433\|Ga0326726_10745358	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300033433\|Ga0326726_10820503	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300033433\|Ga0326726_11456836	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300033810\|Ga0314872_002209	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300034090\|Ga0326723_0044647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1867	Open in IMG/M
3300034090\|Ga0326723_0162289	Not Available	984	Open in IMG/M
3300034090\|Ga0326723_0514068	Not Available	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.97%
Host-Associated	Host-Associated	29.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.29%
Plants	Host-Associated → Plants	29.03%
Aquatic	Environmental → Aquatic	9.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.68%
Sediment	Environmental → Aquatic → Sediment	6.45%
Peat	Environmental → Terrestrial → Peat	5.65%
Roots	Host-Associated → Plants → Roots	3.23%
Marine	Environmental → Aquatic → Marine	2.42%
Freshwater	Environmental → Aquatic → Freshwater	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.48%
Loam	Environmental → Terrestrial → Soil → Loam	8.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.23%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.23%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.23%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.23%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.23%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	3.23%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026344	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 C5	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033810	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_E	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055436_100308962	3300004024	Natural And Restored Wetlands	MMLKNKLLVALLAVTVAAAFGFADNVSAAAKKKLTYEEAWQRCKAFLDKEGTWGTGLQANERYIRGGACMKKYGYKI*
Ga0062593_1015749311	3300004114	Soil	MPSKVKIFVMLLAVALIASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL*
Ga0062593_1028879042	3300004114	Soil	MPSKLFVTLLAVVFIASVTGYTVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0062589_1003561062	3300004156	Soil	MPSKIKLFVMLLAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0062595_1006519081	3300004479	Soil	MTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL*
Ga0062595_1010285512	3300004479	Soil	FMASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0062594_1013897652	3300005093	Soil	MPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL*
Ga0066823_100782902	3300005163	Soil	MTPKNKLLPGILAVAFAAAFGFADSASAAAKKLTYEEAYQKCKAFLDKEGTPGTSTQANVRYTRGSACMKKFGYKL*
Ga0066809_100763122	3300005168	Soil	FAAVLAAALATAFGLADNALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL*
Ga0068996_101206262	3300005218	Natural And Restored Wetlands	MASKNKLLVALLAVAVAAAFGLADNASAAKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYKL*
Ga0066388_1080630861	3300005332	Tropical Forest Soil	MTTRARLFVTLLAGVFALAFGSADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL*
Ga0068869_1012476701	3300005334	Miscanthus Rhizosphere	MTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKF
Ga0070660_1016896951	3300005339	Corn Rhizosphere	LKAEHRERAMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL*
Ga0070689_1016716482	3300005340	Switchgrass Rhizosphere	MTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMK
Ga0070669_1002781301	3300005353	Switchgrass Rhizosphere	MPSKVKIFVMLLAVALIASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHKL*
Ga0070675_1018416642	3300005354	Miscanthus Rhizosphere	NQRKEIAMPSKIKLFVMLLAVVFMASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0070711_1001553981	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAFGNRLLTALLAAALVAAFGFTDNESAATKKKLTYDEAYARCKSLLDKEGAWGTSTSANLRYTRGGACMKKYGHRL*
Ga0070681_102695442	3300005458	Corn Rhizosphere	MPSKIKLFVMLLAVAFTASFAFTGHAVAAKKKLTYEQAYAKCKAILDKEGTPGTTTQSNVRHSRGAACMKKYGHKL*
Ga0070693_1001440781	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKLSWLVLRLRDSRGETG*
Ga0070702_1009282081	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTR
Ga0066903_1029742422	3300005764	Tropical Forest Soil	MTPKARLFVTLVAATFALAVSTADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL*
Ga0081455_100049985	3300005937	Tabebuia Heterophylla Rhizosphere	MLNNRVFAMFAAATLAMAFGFANGALAAKKQLTYEQAYAKCKAIMDKQGTYGTSTMANERYTRGAACMKKYGHNL*
Ga0081455_105664592	3300005937	Tabebuia Heterophylla Rhizosphere	MLNNRVFAMFAAATLTMAFGFANDALAAKKQLTYEQAYAKCKGVMDKQGTYGTTTMANERYTRGAACMKKYGHNL*
Ga0070717_106436591	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSPCMKKFGHKL*
Ga0075023_1000642403	3300006041	Watersheds	MAPKNRIFAAVLAAALATAFGFADDALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL*
Ga0075368_101967302	3300006042	Populus Endosphere	MPSKVKLFVVLLAVGFTASSALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0075024_1000780572	3300006047	Watersheds	MAPKNKIFAAVLAAALATAFGFADDALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL*
Ga0075363_1003059181	3300006048	Populus Endosphere	MPSKIKLFVMLLAVVFTASFAFSGYVVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHNL*
Ga0075363_1008534271	3300006048	Populus Endosphere	MPSKVKLFVMLLAVAFTASFAFTGHAVAAKKLSYEQAYAKCKAIMDKEGTPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0075026_1000140502	3300006057	Watersheds	MAPKNKIFAAVLAAALATAFGFVDNTLAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL*
Ga0075026_1001564942	3300006057	Watersheds	MSRNKLFIALLAVGVAVTFGFADNASAKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGSACMKKYGYRL*
Ga0079222_100079303	3300006755	Agricultural Soil	MSFKNRIFTTFLAGAIAAAFGLTDSASAATKKKLTYDQAYAKCKSIMDKEGTPGTATQSNVRYTRGAACMKKYGHKL*
Ga0079220_107907341	3300006806	Agricultural Soil	MASGNRFLTVHVAGALVAAFGFADSALAAKKKLTYDEAYARCKSLLDKEGAWGTSTNANLRYTRGGACMKKYGHKL*
Ga0075433_110284321	3300006852	Populus Rhizosphere	MPSKVKLFVMLLAVAFTASFAFAGHAVAAKKLSYEQAYAKCKAIMDKEGTPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0068865_1018477772	3300006881	Miscanthus Rhizosphere	LAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0079219_104793012	3300006954	Agricultural Soil	MASGNRFLTVLVAGALVAAFGFADSALAAKKKLTYDEAYARCKSLLDKEGAWGTSTNANLRYTRGGACMKKYGHKL*
Ga0111539_101989433	3300009094	Populus Rhizosphere	MMTFRRKILVALMAITMPLVFGFADETLAASKKKLTYEQAYAKCKAILDKEGTPGTTTQSNVRHTRGAACMKKYGHNL*
Ga0105247_104330971	3300009101	Switchgrass Rhizosphere	MTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKP*
Ga0111538_108349181	3300009156	Populus Rhizosphere	VPVEEERRDPSQFLNEENMMTIRRKILVALMAITMPLVFGFADETLAASKKKLTYEQAYAKCKAILDKEGTPGTTTQSNVRHTRGAACMKKYGHNL*
Ga0105242_120588051	3300009176	Miscanthus Rhizosphere	GLNFKSINQREEISMPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL*
Ga0126384_110557211	3300010046	Tropical Forest Soil	MTPKARLFVTLVAAAFALAVSTADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL*
Ga0126370_101632282	3300010358	Tropical Forest Soil	MTPKARLFVTLLAATFALAVSTADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL*
Ga0126372_109015002	3300010360	Tropical Forest Soil	MTPKARLFVTLLAGVFALAFGSADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL*
Ga0134128_104404452	3300010373	Terrestrial Soil	MSVVSKLFAITLELPRSEVTNKREEIAMSSKVKLFVMLLAVVFTASFASSGYAVAATKKLSYEEAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0134126_101269134	3300010396	Terrestrial Soil	MFLAAALAVAFGLSDGASAAKKKLTYEEAYAKCKSIMDKEGAPGTSTQANVRHTRGAACMKKYGYKL*
Ga0134126_110406682	3300010396	Terrestrial Soil	MAFGNRLLTALLAAALVAAFGFTDNASAATKKKLTYDEAYARCKSLLDKEGAWGTSTSANLRYTRGGACMKKYGHRL*
Ga0134122_117427881	3300010400	Terrestrial Soil	MPSKIKLFVMLLAVVFMASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0157332_10117083	3300012511	Soil	FVMLLAVVFTASFALSGYAVATTKKLSYEQAYAKCKAILDREGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0157326_10397802	3300012513	Arabidopsis Rhizosphere	MPSKIKLFVMLLAVVFTASFALSGDAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0164300_112086372	3300012951	Soil	MASKNKLFVAFLTVALAAAFGFANNASAATKKKLTYDQAYAKCKSILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL*
Ga0164298_104232361	3300012955	Soil	VMLLAVAFTTSFAFTGHSVAETKKLTYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0164298_110094901	3300012955	Soil	LFVAFLTVALAAAFGFANNASAATKKKLTYDQAYAKCKSILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL*
Ga0164303_112896562	3300012957	Soil	MPSKIKLFVMLLAVAFTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGTPGTTTQSNVRHSRGAACMKKYGHKL*
Ga0164302_100153784	3300012961	Soil	MTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYRRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL*
Ga0164302_101702163	3300012961	Soil	ALAAAFGFANNASAATKKKLTYDQAYAKCKSILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL*
Ga0163162_124018262	3300013306	Switchgrass Rhizosphere	MPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHKL*
Ga0075353_10742702	3300014321	Natural And Restored Wetlands	MMASKNKLLVALLAVAVAAAFGLADNASAAKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYKL*
Ga0075352_10266312	3300014324	Natural And Restored Wetlands	MMLKNKLLVALLAVTVAAAFGFADNVSAAAKKKLTYEEAWQRCKAFLDKEGAWGTGLQANERAIRGGACMKKYGYKI*
Ga0132258_115108294	3300015371	Arabidopsis Rhizosphere	MPSKVKLFVMLLAVAFTASFAFTGHAVAAKKLSYEQAYAKCKAILDKEGTPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0132258_117375731	3300015371	Arabidopsis Rhizosphere	MLHKNRILATTLAAALVAAFGLTDTASAATKKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGGACMKKYGYKL*
Ga0132256_1002118413	3300015372	Arabidopsis Rhizosphere	MSSKVKLFVMVSAVVFAASFVFGPYALAAKKLTYDEAYAKCKSIMDKEGTPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0132256_1007921142	3300015372	Arabidopsis Rhizosphere	MPSKKFFAMLLAVAFTASFAFTGHSVAATKKLTYEQAYEKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0132256_1012484931	3300015372	Arabidopsis Rhizosphere	MPSKVKLFVMLLAVAFTASFAFTGHAVAAKKLSYEQAYAKCKAILDKEGTPGTTTQSNVRHTRGAACMKKYGHKI*
Ga0132256_1039241632	3300015372	Arabidopsis Rhizosphere	FLTVALAAAFGFANNASAATKKKLTYDQAYAKCKSILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL*
Ga0132255_1003582343	3300015374	Arabidopsis Rhizosphere	MSSKVKLFVMVSAVVFATSFVFSPYALAAKKLTYDEAYAKCKSIMDKEGTPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0132255_1037053782	3300015374	Arabidopsis Rhizosphere	AVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0163161_103332071	3300017792	Switchgrass Rhizosphere	MPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLSYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL
Ga0163161_107251721	3300017792	Switchgrass Rhizosphere	MTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0187775_100447282	3300017939	Tropical Peatland	MSFKGILATVLAGTLATAFALTDNASAAAKKKLTYDEAYAKCKSIMDKEGTPGTTTQANVRHTRGAACMKKYGYKL
Ga0187775_100609453	3300017939	Tropical Peatland	MVHENKLFATLLAATLAGTFCFADSASAAKQKLTYEQAYARCKSIMDKEGTPGTSTQANVRHTRGAACMKKYGYKL
Ga0187786_101098921	3300017944	Tropical Peatland	MINSFSDKLKEETMVHENKLFATLLAATLAGTFCFADSASAAKQKLTYEQAYARCKSIMDKEGTPGTSTQANVRHTRGAACMKKYGYKL
Ga0187785_1000044612	3300017947	Tropical Peatland	MKSVILSVLLAGVLAAAFGYGDSASAAKKLTYDQAYARCKSILDKEGTPTTTGQSNVRYTRGGACMKKYGYKL
Ga0187785_106874682	3300017947	Tropical Peatland	ATVFALTDNASAATKKKLTYDEAYAKCKSIMDKEGTPGTTTQSNVRYTRGAACMKKYGYR
Ga0187779_1000098813	3300017959	Tropical Peatland	MSFKNGLVATFLAGTLAITLGLTDSASAAKKKLTYEQAYAKCKSIIDKEGTPGTSTQSNVRYTRGAACMKKYGYRL
Ga0187787_100841242	3300018029	Tropical Peatland	MAFRKKMLPAVVAAVLAVAFGSIDSASAAKKKLTYEQAYARCKSILDKEGTPTTTGQSNVRYTRGGACMKKYGYKL
Ga0187788_100232742	3300018032	Tropical Peatland	MPKNKLLVALFAVVVAAVFGFADNASAASKKKLTYKEAYAKCKSIMDKEGTPGTSTPSNVRYTRGAAKKYGYKL
Ga0187788_100766352	3300018032	Tropical Peatland	MSFKGILATVLAGTLATAFALTDNASAATKKKLTYDEAYAKCKSIMDKEGTPGTTTQANVRHTRGAACMKKYGYKL
Ga0184635_100110554	3300018072	Groundwater Sediment	MPFKNRTLAILVAAAAATAFGPIDTASAAKKKLTYDQAYARCKAVMDKAGTPGVGINPNTRYTQGSACMKKYGHRI
Ga0210402_107375472	3300021478	Soil	MTFKNRVFTALLGTGLVAAFGVVADAAAVKKISYEEAYKRCKAVLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0126371_117813672	3300021560	Tropical Forest Soil	MTPKARLFVTLVAATFALAVSTADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL
Ga0210108_10675931	3300025560	Natural And Restored Wetlands	MMLKNKLLVALLAVTVAAAFGFADNVSAAAKKKLTYEEAWQRCKAFLDKEGTWGTGLQANERYIRGGACMKKYGYKI
Ga0207707_105284582	3300025912	Corn Rhizosphere	MPSKIKLFVMLLAVAFTASFAFTGHAVAAKKKLTYEQAYAKCKAILDKEGTPGTTTQSNVRHSRGAACMKKYGHKL
Ga0207649_106085041	3300025920	Corn Rhizosphere	MPSKVKIFVMLLAVALIASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL
Ga0207646_101828223	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0207681_101904121	3300025923	Switchgrass Rhizosphere	MPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHKL
Ga0207701_102695262	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPSKKFFVMLLAVAFTASFAFTGHSVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0207644_106251262	3300025931	Switchgrass Rhizosphere	MTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGS
Ga0207706_100860243	3300025933	Corn Rhizosphere	MPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL
Ga0207651_111116241	3300025960	Switchgrass Rhizosphere	QSLKAEHKERAMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0207712_107409321	3300025961	Switchgrass Rhizosphere	MPSKIKLFVMLLAVVFMASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0207678_104731722	3300026067	Corn Rhizosphere	MPSKIKLFVMLLAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0209647_12025182	3300026319	Grasslands Soil	MASKNKLLVALLTVTVAGAFVFADNASAAAKKKLTYDEAYAKCKSIMDKEGTPGTSTQANVRYTRGAACMKKYGHKL
Ga0256800_10011972	3300026344	Sediment	MASKNKLLVALLAVTVAAAFGLTDNASAAKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYKL
Ga0209813_102358932	3300027866	Populus Endosphere	MPSKVKLFVVLLAVGFTASSALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0209068_100461952	3300027894	Watersheds	MAPKNRIFAAVLAAALATAFGFADDALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL
Ga0207428_101231463	3300027907	Populus Rhizosphere	MPSKVKIFVMLLAVALIASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHKL
Ga0209583_100336052	3300027910	Watersheds	MAPKNRIFAAVLAAALATAFGFADDALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYRL
Ga0209069_100606372	3300027915	Watersheds	MAPKNKIFAAVLAAALATAFGFADDALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL
Ga0307287_100751261	3300028796	Soil	RERAMVFRNRILAILVAAAAATAFGPIDTASAAKKKLTYDQAYARCKAVMDKAGTPGVGINPNTRYTQGSACMKKYGYRL
Ga0307503_103485982	3300028802	Soil	MMTSKRKILVALMAIMMPFALSFAGGALAASNKQLTYEEAYAKCKAILDKEGAPGTMTQSNVRHTRGAACMKKYGHKL
Ga0075386_110596282	3300030916	Soil	MTFKNRVFTALLGTALVAAFGVVADAAAVKKISYEEAYNRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0170834_1009505682	3300031057	Forest Soil	MTPKNKLLPGILAVAIAAAFGFADSASAAAKKLTYEEAYQKCKAFLDKEGTPGTSTQANVRYTRGSACMKKFGYKL
Ga0170822_168575172	3300031122	Forest Soil	MTFKNKVFTALLGTALVAAFGVIADAAAVKKMSYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0170824_1226471152	3300031231	Forest Soil	LVALKAITMPFALSFAGGALAASNKQLTYEEAYAKCKAILDKEGAPGTMTQSNVRHTRGAACMKKYGHKL
Ga0307505_105099821	3300031455	Soil	MTFKNRVFTALLGTALVAAFGVVADAAAVKKISYEEAYKRCKAVLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0307473_100551402	3300031820	Hardwood Forest Soil	MGFKGRIFVALLPAAFALALVSADNASAAKKKLTYDQAYAKCKAIMDKEGTPGTSTQSNVRYTRGGACMKKYGYRL
Ga0310891_103214601	3300031913	Soil	MPSKIKLFVMLLAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHT
Ga0310884_106078061	3300031944	Soil	MLLAVVFMASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0310903_101360912	3300032000	Soil	MPSKIKLFVMLVAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0310897_103699812	3300032003	Soil	EVKRRCKTVNQRKEIAMPSKIKLFVMLLAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0307470_103037901	3300032174	Hardwood Forest Soil	MWRILQQINDGQEKETVMTFKNRVFTALLGTGLVAAFGVVADAAAVKKISYEEAYKRCKAVLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0335085_118269582	3300032770	Soil	MAPKNKIFAAVLAAALATAFGFADNASAAKKKITYEEAYQRCKAFLDKEGTPGTSTQSNVRYT
Ga0335080_1000681312	3300032828	Soil	MLHESKIFATLLAATLAGTFCFADSASAKKKLTYDQAYARCKSVMDKEGTPGTSTQANVRYTRGAACMKKYGYRL
Ga0335084_100775364	3300033004	Soil	MAPKNKIFAAVLAAALATAFGFADNASAAKKKITYEEAYQRCKAFLDKEGTPGTSTQSNVRYTRGSACMKKYGYKL
Ga0310810_101168855	3300033412	Soil	MASKNKLFVAFLTVALAAAFGFANNASAATKKKLTYDQAYAKCKSILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL
Ga0310810_111358902	3300033412	Soil	MPSKLFVTLLAVVFIASVTGYTVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0326726_101916894	3300033433	Peat Soil	MAPKNKIFATVLAAALVTAFGFADNTLAAKKITYEEAYKRCKAIMDKEGTPGTGTQSNVRYTRGSACMKKYGYKL
Ga0326726_107453581	3300033433	Peat Soil	MAPKNKIFAAVLAAALATAFGFADNALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL
Ga0326726_108205032	3300033433	Peat Soil	MVHKNKFIVAFLAGVLAAAFGFVDNASAAKKKITYEEAYQRCKAILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL
Ga0326726_114568362	3300033433	Peat Soil	KNKLYVALIAVMIAVAFGFADNASAASKKKLTYDEAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYRL
Ga0314872_002209_244_477	3300033810	Peatland	MPFKNRFLATLLAGALATVFALADNASAATKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYRL
Ga0326723_0044647_1648_1866	3300034090	Peat Soil	NKIFAAVLAAALATAFSFADNALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL
Ga0326723_0162289_220_450	3300034090	Peat Soil	MVHKNKLIVAFLAVALAAAFGFVDNASAAKKKITYEEAYQRCKAVMDKEGTPGTGTQSNVRYTRGAACMKKYGYKL
Ga0326723_0514068_166_396	3300034090	Peat Soil	MAPKNKIFAAVLAAALATAFGFADNTLAAKKKITYEEAYQRCKAIMDKEGTPGTGTQSNVRYTRGSACMKKYGYKL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068709

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign