NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F068867

Metagenome / Metatranscriptome Family F068867

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068867
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 64 residues
Representative Sequence YGKDKHPYGRDPLGDKERTSKRSRTSEQKAIKYINGIAAKRKYLHEMKGMLDESNILDND
Number of Associated Samples 117
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 95.97 %
% of genes from short scaffolds (< 2000 bps) 87.10 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Duplodnaviria (75.806 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(16.936 % of family members)
Environment Ontology (ENVO) Unclassified
(47.581 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.871 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.91%    β-sheet: 0.00%    Coil/Unstructured: 59.09%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF03420Peptidase_S77 6.45
PF07230Portal_Gp20 2.42
PF07068Gp23 0.81
PF15902Sortilin-Vps10 0.81


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.58 %
UnclassifiedrootN/A2.42 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10181770All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage663Open in IMG/M
3300000224|SI34jun09_10mDRAFT_1049963All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage563Open in IMG/M
3300000928|OpTDRAFT_10045063All Organisms → Viruses → Predicted Viral2388Open in IMG/M
3300000947|BBAY92_10025533All Organisms → Viruses → Predicted Viral1609Open in IMG/M
3300001346|JGI20151J14362_10092970All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1070Open in IMG/M
3300001589|JGI24005J15628_10049793All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1624Open in IMG/M
3300001941|GOS2219_1011021All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage835Open in IMG/M
3300003474|NAP4_1049821All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage825Open in IMG/M
3300005837|Ga0078893_10668436All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1391Open in IMG/M
3300006402|Ga0075511_1147618All Organisms → Viruses → Predicted Viral4636Open in IMG/M
3300006403|Ga0075514_1829938All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage621Open in IMG/M
3300006404|Ga0075515_10020158All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage8255Open in IMG/M
3300006793|Ga0098055_1062822All Organisms → Viruses → Predicted Viral1480Open in IMG/M
3300006868|Ga0075481_10135606All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage901Open in IMG/M
3300006990|Ga0098046_1112100All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage601Open in IMG/M
3300007539|Ga0099849_1351697All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage524Open in IMG/M
3300007541|Ga0099848_1052198All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1644Open in IMG/M
3300007647|Ga0102855_1093634All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage806Open in IMG/M
3300007718|Ga0102852_1079227All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage638Open in IMG/M
3300008012|Ga0075480_10056705All Organisms → Viruses → Predicted Viral2279Open in IMG/M
3300008114|Ga0114347_1173313All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage749Open in IMG/M
3300008117|Ga0114351_1112595All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1564Open in IMG/M
3300008996|Ga0102831_1000783All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage14085Open in IMG/M
3300009000|Ga0102960_1031694All Organisms → Viruses → Predicted Viral1966Open in IMG/M
3300009001|Ga0102963_1313565All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage617Open in IMG/M
3300009024|Ga0102811_1131707All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage935Open in IMG/M
3300009152|Ga0114980_10525925All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage672Open in IMG/M
3300009420|Ga0114994_10174727All Organisms → Viruses → Predicted Viral1451Open in IMG/M
3300009425|Ga0114997_10436753All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage703Open in IMG/M
3300009497|Ga0115569_10181017All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage986Open in IMG/M
3300009543|Ga0115099_10413373All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3155Open in IMG/M
3300010354|Ga0129333_11707566All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage512Open in IMG/M
3300012418|Ga0138261_1355837All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage594Open in IMG/M
3300012664|Ga0157497_1011891All Organisms → Viruses → Predicted Viral1242Open in IMG/M
3300012928|Ga0163110_11426272All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage561Open in IMG/M
3300012935|Ga0138257_1489939Not Available634Open in IMG/M
3300012954|Ga0163111_10087346All Organisms → Viruses → Predicted Viral2528Open in IMG/M
3300016726|Ga0182045_1194952All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1365Open in IMG/M
3300017708|Ga0181369_1073438All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage736Open in IMG/M
3300017714|Ga0181412_1153295All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage518Open in IMG/M
3300017727|Ga0181401_1005595All Organisms → Viruses → Predicted Viral4286Open in IMG/M
3300017742|Ga0181399_1061013All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage969Open in IMG/M
3300017751|Ga0187219_1187574All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage577Open in IMG/M
3300017756|Ga0181382_1184136All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage532Open in IMG/M
3300017770|Ga0187217_1196715All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage667Open in IMG/M
3300017782|Ga0181380_1182278All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage708Open in IMG/M
3300017818|Ga0181565_10115606All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1892Open in IMG/M
3300017951|Ga0181577_10239959All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1196Open in IMG/M
3300017951|Ga0181577_10397408All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage877Open in IMG/M
3300017962|Ga0181581_10383625All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage887Open in IMG/M
3300017985|Ga0181576_10653947All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage632Open in IMG/M
3300017985|Ga0181576_10668017All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage623Open in IMG/M
3300018041|Ga0181601_10386139All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage752Open in IMG/M
3300018418|Ga0181567_10710710All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage641Open in IMG/M
3300018421|Ga0181592_11033928All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage528Open in IMG/M
3300018426|Ga0181566_10718107All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage686Open in IMG/M
3300018428|Ga0181568_11419344All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage515Open in IMG/M
3300019280|Ga0182068_1620904All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage714Open in IMG/M
3300020013|Ga0182086_1213296All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage626Open in IMG/M
3300020052|Ga0181554_1116293All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1231Open in IMG/M
3300020173|Ga0181602_10091909All Organisms → Viruses → Predicted Viral1509Open in IMG/M
3300020182|Ga0206129_10396377All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage521Open in IMG/M
3300020187|Ga0206130_10117922All Organisms → Viruses → Predicted Viral1492Open in IMG/M
3300020274|Ga0211658_1085275All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage630Open in IMG/M
3300020377|Ga0211647_10250665All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage563Open in IMG/M
3300020421|Ga0211653_10176403All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage940Open in IMG/M
3300020446|Ga0211574_10174836All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage935Open in IMG/M
3300020470|Ga0211543_10338380All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage727Open in IMG/M
3300020595|Ga0206126_10281800All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage753Open in IMG/M
3300021336|Ga0210307_1370871All Organisms → Viruses → Predicted Viral1471Open in IMG/M
3300021356|Ga0213858_10206851All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage952Open in IMG/M
3300021424|Ga0194117_10017799All Organisms → Viruses4904Open in IMG/M
3300021957|Ga0222717_10472451All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage680Open in IMG/M
3300021963|Ga0222712_10165719All Organisms → Viruses → Predicted Viral1477Open in IMG/M
3300021963|Ga0222712_10318559All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage969Open in IMG/M
3300021963|Ga0222712_10598191All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage637Open in IMG/M
3300021964|Ga0222719_10634857All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage615Open in IMG/M
3300023105|Ga0255782_10521510All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage504Open in IMG/M
3300023110|Ga0255743_10359017All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage732Open in IMG/M
3300023175|Ga0255777_10033616All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3569Open in IMG/M
3300023178|Ga0255759_10416604All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage810Open in IMG/M
3300024226|Ga0228667_1007643All Organisms → Viruses → Predicted Viral2384Open in IMG/M
3300024231|Ga0233399_1111041All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage620Open in IMG/M
(restricted) 3300024255|Ga0233438_10324179All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage583Open in IMG/M
3300024296|Ga0228629_1034285All Organisms → Viruses → Predicted Viral1373Open in IMG/M
3300024301|Ga0233451_10145467All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1090Open in IMG/M
3300024329|Ga0228631_1040081All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1328Open in IMG/M
3300024329|Ga0228631_1048744All Organisms → Viruses → Predicted Viral1153Open in IMG/M
3300024329|Ga0228631_1085541All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage773Open in IMG/M
3300025070|Ga0208667_1015443All Organisms → Viruses → Predicted Viral1601Open in IMG/M
3300025098|Ga0208434_1021990All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1583Open in IMG/M
3300025102|Ga0208666_1040422All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1356Open in IMG/M
3300025138|Ga0209634_1089677All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1389Open in IMG/M
3300025483|Ga0209557_1053348All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Fluviicola → unclassified Fluviicola → Fluviicola sp. XM-24bin11008Open in IMG/M
3300025626|Ga0209716_1047410All Organisms → Viruses → Predicted Viral1441Open in IMG/M
3300025696|Ga0209532_1231788All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage505Open in IMG/M
3300025769|Ga0208767_1223703All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage612Open in IMG/M
3300025869|Ga0209308_10171329All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage982Open in IMG/M
3300025870|Ga0209666_1225166All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage787Open in IMG/M
3300025879|Ga0209555_10296133All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage621Open in IMG/M
3300025880|Ga0209534_10310696All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage721Open in IMG/M
3300026500|Ga0247592_1100525All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage697Open in IMG/M
3300026503|Ga0247605_1005633All Organisms → Viruses → Predicted Viral2842Open in IMG/M
3300027396|Ga0255146_1073963All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage707Open in IMG/M
3300027418|Ga0208022_1006182All Organisms → Viruses → Predicted Viral2976Open in IMG/M
3300027621|Ga0208951_1164691All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage570Open in IMG/M
3300027631|Ga0208133_1149972All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage538Open in IMG/M
3300027801|Ga0209091_10240667All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage883Open in IMG/M
3300027808|Ga0209354_10005880All Organisms → Viruses4975Open in IMG/M
3300027973|Ga0209298_10346789All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage568Open in IMG/M
3300028111|Ga0233397_1163380All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage507Open in IMG/M
3300028126|Ga0228648_1043574All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage827Open in IMG/M
3300028129|Ga0228634_1092113All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage679Open in IMG/M
3300028196|Ga0257114_1072944All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1455Open in IMG/M
3300028284|Ga0257120_1042749All Organisms → Viruses → Predicted Viral1221Open in IMG/M
3300028671|Ga0257132_1069578All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage759Open in IMG/M
3300031140|Ga0308024_1030911All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1484Open in IMG/M
3300031141|Ga0308021_10099983All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1166Open in IMG/M
3300031569|Ga0307489_10109240All Organisms → Viruses → Predicted Viral1609Open in IMG/M
3300031687|Ga0308008_1080356All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage764Open in IMG/M
3300031851|Ga0315320_10499368All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage821Open in IMG/M
3300032088|Ga0315321_10113154All Organisms → Viruses → Predicted Viral1840Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh16.94%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine9.68%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater9.68%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous6.45%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.65%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.65%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine4.84%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine4.03%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.03%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.42%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine2.42%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.42%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.42%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake1.61%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton1.61%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.61%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.61%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine1.61%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.61%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.61%
Polar MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine1.61%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic0.81%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.81%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.81%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.81%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.81%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.81%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.81%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.81%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.81%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.81%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.81%
EstuarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine0.81%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.81%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000224Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 10mEnvironmentalOpen in IMG/M
3300000928Marine plume microbial communities from the Columbia River - 25 PSUEnvironmentalOpen in IMG/M
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001941Marine microbial communities from Browns Bank, Gulf of Maine - GS003EnvironmentalOpen in IMG/M
3300003474Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006402Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006403Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006404Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007647Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02EnvironmentalOpen in IMG/M
3300007718Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300008114Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008996Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747EnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009543Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300012418Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012664Freshwater microbial communities from Zephyr Creek, Ontario, Canada - S17EnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012935Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA5.ICE_1m.20151110 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300016726Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011504BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018418Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019280Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071401AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020013Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041406CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020052Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011503CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020274Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)EnvironmentalOpen in IMG/M
3300020377Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300020446Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300021336Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021424Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surfaceEnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023105Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaGEnvironmentalOpen in IMG/M
3300023110Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaGEnvironmentalOpen in IMG/M
3300023175Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaGEnvironmentalOpen in IMG/M
3300023178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaGEnvironmentalOpen in IMG/M
3300024226Seawater microbial communities from Monterey Bay, California, United States - 81DEnvironmentalOpen in IMG/M
3300024231Seawater microbial communities from Monterey Bay, California, United States - 43DEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024296Seawater microbial communities from Monterey Bay, California, United States - 36DEnvironmentalOpen in IMG/M
3300024301Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)EnvironmentalOpen in IMG/M
3300024329Seawater microbial communities from Monterey Bay, California, United States - 39DEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025483Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025696Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025879Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300026500Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026503Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 91R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027396Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_8hEnvironmentalOpen in IMG/M
3300027418Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 (SPAdes)EnvironmentalOpen in IMG/M
3300027621Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027631Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028111Seawater microbial communities from Monterey Bay, California, United States - 35DEnvironmentalOpen in IMG/M
3300028126Seawater microbial communities from Monterey Bay, California, United States - 60DEnvironmentalOpen in IMG/M
3300028129Seawater microbial communities from Monterey Bay, California, United States - 42DEnvironmentalOpen in IMG/M
3300028196Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10mEnvironmentalOpen in IMG/M
3300028284Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_10EnvironmentalOpen in IMG/M
3300028671Metatranscriptome of marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031140Marine microbial communities from water near the shore, Antarctic Ocean - #420EnvironmentalOpen in IMG/M
3300031141Marine microbial communities from water near the shore, Antarctic Ocean - #351EnvironmentalOpen in IMG/M
3300031569Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2EnvironmentalOpen in IMG/M
3300031687Marine microbial communities from water near the shore, Antarctic Ocean - #125EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300032088Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1018177013300000117MarineTYKKDKHPLGRDPLGDKERTKKRSRTSEDKALKVINGIAAKRKYLHEMKDMLDESNIIDES*
SI34jun09_10mDRAFT_104996313300000224MarineTYGKDKHPLGRDPLGDKERTSKRTRTSEEKAIKYINGIASKRKYLHEKNSMLDEDNILDA
OpTDRAFT_1004506333300000928Freshwater And MarineRPREGGTYKKDKHPQGRDPLGDKERTKKRSRTSEDKALKVINGIASKRKYLHEMKDMLDETNILDND*
BBAY92_1002553343300000947Macroalgal SurfaceKDKHPLGRDPLGDDERTKKRSRTSEDKAIKYINGIAAKRKYLHEMKGMLDENNILDQE*
JGI20151J14362_1009297013300001346Pelagic MarineDKHPYGRDPLGDKERKDAKRNTTSEEKAIQYISGIASKRKYLHELRGMLDEENILKDTEN
JGI24005J15628_1004979313300001589MarineLGRDPLGKEDRKKKRTRTSEEKALTYINGIAAKRKYLHEDKDMLDEDNILSDTEN*
GOS2219_101102113300001941MarineGGTYGKDKHPLGSRPLGNKERKKKRSRTSEDKALEFINGIASKKKYLHENTNMLDEDNILKDTEN*
NAP4_104982123300003474EstuarineLGRDPLGDKERKKERSRTSEDRAIKMISGIASKRKYLHEVKGMLDEDNILEE*
Ga0078893_1066843623300005837Marine Surface WaterKHPLGRDPLGDKERTSKRSRTSEDKALKVINGISAKRKYLHEIKDMLDESNILDSE*
Ga0075511_114761893300006402AqueousPLGRDPLGDKERTKERNRTSEEKAIKMISGIASKRKYLHEIKGMLDEDNILDE*
Ga0075514_182993813300006403AqueousEGGTYGKDKHPLGRDPLGDKERTSKRSRTSEEKALKVINGISAKRKYLHEMKDMLDESNILDND*
Ga0075515_1002015813300006404AqueousGGTYGKDKHPLGRDPLGDKERTKKRSRTSEEKALSYINGISSKRKYLHETKDMLDEDNIIQETEN*
Ga0098055_106282213300006793MarineIENIKQEIKDKGGRPREGGTYGKDKHPQGRDPLGDKERTKKRSRTSEEKALKVINGIASKRKYLHEIKDMLDESNILDNE*
Ga0075481_1013560623300006868AqueousREGGTYGKDKHPLGRDPLGDKERTKERNRTSEEKAIKMISGIASKRKYLHEIKGMLDEDNILDE*
Ga0098046_111210013300006990MarineREGGTYGKDKHPQGRDPLGDKDRTKKRSRTSEEKALKAINGISAKRKYLHEMKDMLDESNILDSD*
Ga0099849_135169723300007539AqueousEQIENIKQEIKDKGGRPREGGTYGKDKHPYGRDPLGDKERTSKRSRTSEEKAIKYINGIAAKRKYLHEIKGMLDEDNILEE*
Ga0099848_105219813300007541AqueousKDKHPYGRDPLGDDERTSKRTRTSEEKATQYISGIASKRKYLHEIKDMLDESNILED*
Ga0102855_109363413300007647EstuarineDKGGRPREGGTYKKDKHPLGRDPLGDKERRDAKRNTTSEEKALKYINGISSKRKYLHELKGMLNEDNILDE*
Ga0102852_107922723300007718EstuarineLKQEIKDKGGRPREGGTYGKDKHSYGRDPLGDKERKDARKNTTSEEKAIQYISGIASKRKYLNEIKDMLDEDNILKDT*
Ga0075480_1005670513300008012AqueousEGGTYGKDKHPLGRDPLGDKERTKKRSRTSEEKALSYINGISSKRKYLHETKDMLDEDNIIQETEN*
Ga0114347_117331313300008114Freshwater, PlanktonELQDKGGRPREGNTYGKDKSPFGRDPLGDKENHNALKNRTSEQKALKYINGISAKRKYLHETKGMLDESNILDNQ*
Ga0114351_111259513300008117Freshwater, PlanktonREGNTYGKDKSPFGRDPLGDKENHNALKNRTSEQKALKYINGISAKRKYLHETKGMLDESNILDNQ*
Ga0102831_1000783173300008996EstuarinePYGRDPLGDDERTSKRSRTSEQKAHTYISGIASKRKYLHETKNMLDEDNILQDT*
Ga0102960_103169413300009000Pond WaterRDPLGDKERTSKRSRTSEEKALKVINGIASKRKYLHEVKDMLDESNILDSE*
Ga0102963_131356523300009001Pond WaterYGKDKHPYGRDPLGDKERTSKRSRTSEQKAIKYINGIAAKRKYLHEMKGMLDESNILDND
Ga0102811_113170713300009024EstuarineYGKDKHPYGRDPLGDDERTSKRSRTSEQKAHTYISGIASKRKYLHETKNMLDEDNILQDT
Ga0114980_1052592523300009152Freshwater LakeYGKDKHPYGRDPLGDDERTGKRTRTSEAKAKTFINGISSKKKYLHENTGMLDETNIMDDTEKLF*
Ga0114994_1017472733300009420MarinePREGGTYGKDKHPLGRDPLGDKERTSKRSRTSEDKALTYINGISSKRKYLHEDTDMLNEDNILEDTEN*
Ga0114997_1043675313300009425MarineGRDPLGDKERTSKRSRTSEETALKYINGISSKRKYLNEDTDMLNEDNILEDTEK*
Ga0115569_1018101713300009497Pelagic MarineKGGRPRESGTYGKDKHPYGRDPLGNKERKDAKRNTTSEEKAIKYVSGIAAKRKYLHELRGMLDEENILKDTEN*
Ga0115099_1041337343300009543MarineGTYKKDKHPLGRDPLGDDERTKKRSRTSEEKAIKYINGIASKRKYLHEIKGMLDEGNILDQE*
Ga0129333_1170756623300010354Freshwater To Marine Saline GradientRPREGNTYGKDKHPYGRDPLGDNERTSKRNRTSEAKAKSFINGISSKRKFLHEMKDMLDETNIIDDTEN*
Ga0138261_135583723300012418Polar MarineGRPREGGTYGKDKHPLGRDPLGDKERTSKRSRTSEDTAGKIINGISAKRKYLHEDTDMLNEDNILEDTEN*
Ga0157497_101189113300012664FreshwaterPYGRDPLGDNERTSKRNRTSEAKAKSFINGISSKRKFLHEMKDMLDETNIIDDTEN*
Ga0163110_1142627213300012928Surface SeawaterKDKHPYGRDPLGNKERKDARKNTTSEEKAIKYISGIASKRKYLHEIKDMLDEDNILKDTEN*
Ga0138257_148993913300012935Polar MarineHPLGRDPLGDKERTSKRSRTSEDRALGYINGISSKRKYLNEDTDMLNEDNILEDTEN*
Ga0163111_1008734663300012954Surface SeawaterGRDPLGDKERTKKRSRTSEEKALSYINGISPKKKYLHESKDMLDEDNIIQETEN*
Ga0182045_119495233300016726Salt MarshREGGTYGKDKHPYGRDPLGDDERTSKRTRTSEDKAMKVINGIAAKRKYLHEMKDMLDESNILEDTEK
Ga0181369_107343823300017708MarineGEKEHPYGRDPLGNKERKDARKNTTSEEKAIEYISGIAAKKKYLHEIKDMLDEENLLKDTEN
Ga0181412_115329513300017714SeawaterHPLGRDPLGDDERTKKRSRTSEEKAIKYINGIASKRKYLHEIKGMLDEGNILDQE
Ga0181401_100559513300017727SeawaterHPQGRDPLGDKERTKKRSRTSEEKALQTINGIAAKRKYLHEMKDMLDESNILDND
Ga0181399_106101313300017742SeawaterTYGKDKHPQGRDPLGDKERTKKRSRTSEEKALQTINGIAAKRKYLHEMKDMLDESNILDN
Ga0187219_118757413300017751SeawaterHPLGRDPLGSKERKKKRSRTSEEKALEFINGIASKKKYLHENTNMLDEDNILKDTEN
Ga0181382_118413613300017756SeawaterTYGKDKHPLGRDPLGDKERTKKRSRTSEEKAIKMINGIAAKRKYLHEVKDMLDESNLLES
Ga0187217_119671513300017770SeawaterGGTYGKDKHPLGRDPLGSKERKKKRSRTSEEKAIKMISGIASKRKYLNEIKGMLDEDNILEE
Ga0181380_118227823300017782SeawaterYGKDKHPLGRDPLGKKEKNKKRSRTSEEKAIKMISGIASKRKYLNEIKGMLDEDNILEE
Ga0181565_1011560613300017818Salt MarshGGTYGKDKHPYGRDPLGDDERTSKRSRTSEDKAIEYISGIAAKRKYLHEIKDMLDESNIIDE
Ga0181577_1023995913300017951Salt MarshPREGGTYGKDKHPLGRDPLGDKERTKERNRTSEEKAIKMISGIASKRKYLHEMKGMLDEDNILEE
Ga0181577_1039740813300017951Salt MarshGTYGKDKHPYGRDPLGDDERTSKRSRTSEDKAIEYISGIAAKRKYLHEIKDMLDESNIID
Ga0181581_1038362513300017962Salt MarshPREGGTYEKDKHPYGRDPLGDKERTSKRSRTSEEKAIKIINGISAKRKYLHEMKGMLDESNILDSE
Ga0181576_1065394723300017985Salt MarshLGRDPLGDKERTKERNRTSEEKAIKMISGIASKRKYLHEIKGMLDEDNILDE
Ga0181576_1066801713300017985Salt MarshDKGGRPREGGTYGKDKHPYGRDPLGDDERTSKRSRTSEDKAIQYVNGISAKRKYLHEMKDMLDESNILEE
Ga0181601_1038613913300018041Salt MarshGGRPREGGTYEKDKHPYGRDPLGNKERTSKRSRTSEETAIKYINGIASKRKYLHEIRGMLDEDNILD
Ga0181567_1071071013300018418Salt MarshHPYGRDPLGDDERTSKRSRTSEDKAIQYVNGISAKRKYLHEMKDMLDESNILEE
Ga0181592_1103392823300018421Salt MarshGRDPLGDDERTSKRSRTSEDKAIQYISGIASKRKYLHEIKDMLDESNILED
Ga0181566_1071810713300018426Salt MarshGGTYGKDKHPYGRDPLGDDERTSKRSRTSEDKAIQYVNGISAKRKYLHEMKDMLDESNILEE
Ga0181568_1141934413300018428Salt MarshPREGGTYGKDKHPYGRDPLGNKERKDARKNTTSEEKAIKYVSGIAAKRKYLHEIKDMLDEENILKDTEN
Ga0182068_162090423300019280Salt MarshGTYEKDKHPYGRDPLGDKERTSKRSRTSEEKALKVINGIASKRKYLHEVKDMLDESNILDSE
Ga0182086_121329613300020013Salt MarshKHPYGRDPLGDKERTSRRSRTSEEKALKVINGIASKRKYLHEVKDMLDESNILDSE
Ga0181554_111629333300020052Salt MarshGRDPLGDDERTSKRTRTSEDKAMKVINGIAAKRKYLHEMKDMLDESNILEDTEK
Ga0181602_1009190913300020173Salt MarshENIKQEIKDKGGRPREGGTYEKDKHPYGRDPLGDKERTSKRSRTSEEKALKVINGIASKRKYLHEVKDMLDESNILDSE
Ga0206129_1039637713300020182SeawaterHPLGRDPLGDKERTKERNRTSEEKAIKMISGIASKRKYLHEIKGMLDETNLLDD
Ga0206130_1011792233300020187SeawaterYKKDKHPNGRDPLGDKERKDAKRNTTSEEKAIQYISGIASKRKYLHELRDMLDEENILKDTEN
Ga0211658_102131433300020274MarineEDEEPDDIEESLEALKREIKDKGGRPREGGTYKKDKSPFGRDPLGDKERKGARKNTTSEEKAIKMISGIASKRKYLHEMKGMLDEDNILDE
Ga0211658_108527523300020274MarineEGNTYKKDKHPLGRDPLGDKERTKKRSRTSEEKAIQYIDGIASKRKYLHEVKDMLDESNLLDSE
Ga0211647_1025066513300020377MarinePREGGTYKKDKSPFGRDPLGDKERKGARKNTTSEEKAIKMISGIASKRKYLHEMKGMLDEDNILDE
Ga0211653_1017640323300020421MarineREIKDKGGRPREGGTYKKDKSPFGRDPLGDKERKGARKNTTSEEKAIKMISGIASKRKYLHEMKGMLDEDNILDE
Ga0211574_1017483613300020446MarineLGNKERKDAKKNTTSEEKAIKYISGIASKRKYLHEIKDMLDEDNILKDTEN
Ga0211543_1033838013300020470MarineRPREGGTYGKDKHPYGRDPLGNKERKDAKKNTTSEEKAIKYISGIASKRKYLHEIKDMLDEDNILKDTEN
Ga0206126_1028180013300020595SeawaterDKHSLGRDPLGKKEKNKKRSRTSEEKAIKMISGIASKRKYINEIKGMLDEDNILEE
Ga0210307_137087113300021336EstuarineGNTYGKDKHPYGRDPLGDKERTSKRSRTSEDKAIKAINGIAAKRKYLHEMKDMLDESNILEDTEK
Ga0213858_1020685123300021356SeawaterYGRDPLGDDERTSKRSRTSEDKAIQYISGISAKRKYLHEMKDMLDESNILEE
Ga0194117_1001779993300021424Freshwater LakeKNTYGKDKHPYGRDPLGDKENSKALKHRTSEQKALKYINGISSKRKFLHETKGMLDESNIIDDK
Ga0222717_1047245113300021957Estuarine WaterYGKDKHPLGRDPLGDKERTSKRSRTSEEKALKVINGISAKRKYLHEMKDMLDESNILDND
Ga0222712_1016571933300021963Estuarine WaterTYGKDKHPYGRDPLGDNERTGKRSRTSEHKAKSFINGISSKRKYLHETKDMLDETNIIDDTEKFI
Ga0222712_1031855923300021963Estuarine WaterPREGNTYGKDKSPFGRDPLGDKENHNALKHRTSEQKALKYINGIAAKRKFLNETKGMLDESNIIGIEEN
Ga0222712_1059819113300021963Estuarine WaterEPLGDSERTAKRSRTSEVKAKSFINGISSKKKYLHETKDMLDETNIIDDTEN
Ga0222719_1063485723300021964Estuarine WaterGGRPREGGTYEKDKHPYGRDPLGNKERTSKRSRTAEETAIKYINGIASKRKYLHEIKGMLDEDNILD
Ga0181351_115794323300022407Freshwater LakeEDVEESLNQLNTELESTKDKGGRPREGNTYGKDKSPFGRDPLGDKENHNALKNRTSEQKALKMINGIASKRKYLYESKGMLDESNILDNE
Ga0255782_1052151023300023105Salt MarshEKDKHPYGRDPLGNKERTSKRSRTSEETAIKYINGIASKRKYLHEIKGMLDEDNILD
Ga0255743_1035901723300023110Salt MarshGRPREGGTYGKDKHPYGRDPLGDDERTSKRTRTSEDKAIQYINGISAKRKYLHEMKDMLDESNILEE
Ga0255777_1003361693300023175Salt MarshGKDKHPYGRDPLGDKERTKKRSRTSEEKAIKMINGISAKRKYLHEIKDMLDESNILDSE
Ga0255759_1041660423300023178Salt MarshYGKDKHPYGRDPLGDKERKSARKNTTSEEKAIQYVSGIAAKRKYLHEIKDMLDEENILKDTEN
Ga0228667_100764313300024226SeawaterHPYGRDPLGDKERKDAKRNTTSEEKAIQYINGIASKRKYLHELKGMLDEENILKDTEN
Ga0233399_111104123300024231SeawaterGKDKHPLGRDPLGKKEKNKKRSRTSEEKAIKMISGIASKRKYLNEIKGMLDEDNILEE
(restricted) Ga0233438_1032417923300024255SeawaterKKDKHPLGRDPLGDKERTEKRSRTSEEKALKVINGIAAKRKYLHEMKDMLDESNIIDES
Ga0228629_103428533300024296SeawaterXEGGNYGKDKHPLGRDPLGDKERTKKRSRTSEEKAIKMINGIAAKRKYLHEVKDMLDESNLLESE
Ga0233451_1014546723300024301Salt MarshEGGTYEKDKHPYGRDPLGDKERTSKRSRTSEEKALKVINGIAAKRKYLHEVKDMLDESNILDSE
Ga0228631_104008113300024329SeawaterGTYGKDKHPYGRDPLGDKERKDAKRNTTSEEKAIQYINGIASKRKYLHELKGMLDEENILKDTEN
Ga0228631_104874423300024329SeawaterPLGRDPLGDKERTKKRSRTSEDKAIKYINGIAAKRKYLHEMKGMLDENNILDED
Ga0228631_108554123300024329SeawaterEGGTYGKDKHPLGRDPLGKKEKNKKRSRTSEEKAIKMISGIASKRKYLNEIKGMLDEDNILEE
Ga0208667_101544323300025070MarineMKSQMILKNKLKILKDKHPQGRDPLGDKERTKKRSRTSEEKALKVINGIASKRKYLHEIKDMLDESNILDNE
Ga0208434_102199033300025098MarineYGKDNHPQGRDPLGDKERTKKRSRTSEEKALKVINGIASKRKYLHEIKDMLDESNILDNE
Ga0208666_104042233300025102MarineEGGTYGKDKHPYGRDPLGNKERKDARKNTTSEEKAIEYISGIAAKKKYLHEIKDMLDEENLLKDTEN
Ga0209634_108967733300025138MarineLGRDPLGKEDRKKKRTRTSEEKALTYINGIAAKRKYLHEDKDMLDEDNILSDTEN
Ga0209557_105334813300025483MarineMTIVEKIKQEIKDKGGRPREGGTYKKDKHPLGRDPLGDKERRDAKKNTTSEEKALKYINGISSKRKYLHELKGMLNEDNI
Ga0209716_104741013300025626Pelagic MarineEGGTYGKDKHPLGRDPLGDKERTSKRSRTSEEKALKVINGISAKRKYLHEMKDMLDESNILDND
Ga0209532_123178823300025696Pelagic MarineRDPLGDKERRDAKRNTTSEETALKYINGISSKRKYLHELKGMLNEDNILDE
Ga0208767_122370313300025769AqueousKEIKDKGGRPREGGTYKKDKSPFGRDPLGDKERKDAKKNTTSEERALKYINGISSKRKYLHELKGMLNEDNILDE
Ga0209308_1017132913300025869Pelagic MarineEIKDKGGRPREGNTYKKDKHPYGRDPLGDKERKDAKRNTTSEEKAIQYISGIASKRKYLHELRGMLDEENILKDTEN
Ga0209666_122516613300025870MarineRPREGGTYKKDKHPLGRDPLGDKERTKKRSRTSEERALKYINGISSKRKYLNEDTDMLDESNIIQDTEN
Ga0209555_1029613323300025879MarineKDKHPYGRDPLGDKERTSKRTRTSEDKAMKVINGIAAKRKYLHESGNMLDESNIIEES
Ga0209534_1031069613300025880Pelagic MarineYGKDKHSLGRDPLGKKEKNKKRSRTSEEKAIKMISGIASKRKYINEIKGMLDEDNILEE
Ga0247592_110052523300026500SeawaterGRPREGGTYGKDKHPQGRDPLGDKERTKKRSRTSEEKALQTINGIAAKRKYLHEMKDMLDESNILDSD
Ga0247605_100563313300026503SeawaterKDKGGRPKEGGTYGKDKHPYGRDPLGDKERKDAKRNTTSEEKAIQYINGIASKRKYLHELKGMLDEENILKDTEN
Ga0255146_107396323300027396FreshwaterGNTYGKDKHPYGRDPLGDKENSKALKNRTSEQKALKYINGISSKRKFLHETKGMLDESNIIDDREN
Ga0208022_100618213300027418EstuarineHPYGRDPLGDDERTSKRSRTSEQKAHTYISGIASKRKYLHETKNMLDEDNILQDT
Ga0208951_116469123300027621Freshwater LenticRPREGNTYGKDKHPYGRDPLGDDERTSKRSRTSETKAMNYINGISSKKKYLHETKDMLDETNIIDDTEN
Ga0208133_114997223300027631EstuarineKGGRPREGNTYGKDKSPFGRDPLGDKENKNALKHRTSEDRALQYINGISAKRKFLAEQKGMLDETNIIDDTKN
Ga0209091_1024066713300027801MarinePREGGTYGKDKDPLGRDPLGDKERTSKRSRTSEDKALKVINGISAKRKYLHEMNSMLDESNIIDES
Ga0209354_1000588083300027808Freshwater LakeEESLENIKTELANKGGRPREGNTYGKDKSPFGRDPLGDKENKNALKHRTSEDRALQYINGISAKRKFLAEQKGMLDETNIIDDTKN
Ga0209298_1034678913300027973Freshwater LakeDKHPYGRDPLGDDERTGKRTRTSEAKAKTFINGISSKKKYLHENTGMLDETNIMDDTEKL
Ga0233397_116338013300028111SeawaterQLEDIKNEIKDKGGRPREGGTYGKDKHPLGRDPLGDKERTKKRSRTSEDKAIKYINGIAAKRKYLHEMKGMLDENNILDED
Ga0228648_104357423300028126SeawaterKHPYGRDPLGDKERKDAKRNTTSEEKAIQYINGIASKRKYLHELKGMLDEENILKDTEN
Ga0228634_109211323300028129SeawaterKDKHPYGRDPLGDKERKDAKRNTTSEEKAIQYINGIASKRKYLHELKGMLDEENILKDTE
Ga0257114_107294433300028196MarineKIKQEIKDKGGRPREGGTYKKDKHPLGRDPLGDKERRDAKKNTTSEEKALKYINGISSKRKYLHELKGMLNEDNILDE
Ga0257120_104274913300028284MarineGRPREGGTYKKDKHPLGRDPLGDKERRDAKKNTTSEEKALKYINGISSKRKYLHELKGMLNEDNILDE
Ga0257132_106957813300028671MarineYGKDKHPLGRDPLGDKERTKKRSRTSEDKALSYINGISSKRKYLHEDTDMLNEDNILEDTEN
Ga0308024_103091133300031140MarineGGTYKKDKHPLGRDPLGDKERTSKRSRTSEDRALGYINGISSKRKYLNEDTDMLNEDNILEDTEN
Ga0308021_1009998313300031141MarineHPLGRDPLGDKERTSKRSRTSEDTAGKIINGISSKRKYLHEETDMLNEDNILDDTKN
Ga0307489_1010924033300031569Sackhole BrineENLKNELKDKGGRPREGGTYGKDKHPQGRDPLGDKERTSKRSRTSEDKALKVINGISAKRKYLHEMNSMLDESNIIDES
Ga0308008_108035623300031687MarinePREGGTYGKDKHPLGRDPLGDKERTSKRSRTSEDTAGKIINGISAKRKYLHEDTDMLNEDNILEDTEN
Ga0315320_1049936823300031851SeawaterKHPLGRDPLGDKERRDAKRNTTSEEKALKYINGISSKRKYLHELKGMLNEDNILDE
Ga0315321_1011315443300032088SeawaterPREGGTYGKDKHPLGRDPLGDKERTKKRSRTSEDKAIKYINGIAAKRKYLHEMKGMLDENNILDED

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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