Metagenome / Metatranscriptome Family F068884

Basic Information
Family ID	F068884
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	101 residues
Representative Sequence	PVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV
Number of Associated Samples	105
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	2.42 %
% of genes from short scaffolds (< 2000 bps)	4.03 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (96.774 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.839 % of family members)
Environment Ontology (ENVO)	Unclassified (36.290 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.323 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 47.06% Coil/Unstructured: 52.94%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF03797	Autotransporter	31.45
PF01541	GIY-YIG	4.84
PF12951	PATR	4.03
PF00501	AMP-binding	0.81
PF13358	DDE_3	0.81
PF11306	DUF3108	0.81
PF03734	YkuD	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.81
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.81

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.77 %
All Organisms	root	All Organisms	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.77 %
cellular organisms	root	All Organisms → cellular organisms	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.77 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.77 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.23 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005764\|Ga0066903_101386682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1319	Open in IMG/M
3300010376\|Ga0126381_102952228	Not Available	676	Open in IMG/M
3300015373\|Ga0132257_103309352	Not Available	587	Open in IMG/M
3300031545\|Ga0318541_10037065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2452	Open in IMG/M
3300031549\|Ga0318571_10040749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1343	Open in IMG/M
3300031573\|Ga0310915_10323424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1091	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.55%
Host-Associated	Host-Associated	31.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.29%
Plants	Host-Associated → Plants	31.45%
Aquatic	Environmental → Aquatic	7.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.06%
Sediment	Environmental → Aquatic → Sediment	7.26%
Roots	Host-Associated → Plants → Roots	4.84%
Floodplain	Environmental → Terrestrial → Floodplain	1.61%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.26%
Loam	Environmental → Terrestrial → Soil → Loam	6.45%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.23%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.61%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.03%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.23%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.61%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.23%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24033J26618_10263491	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	RYIIGIPNFXPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0062595_1026370321	3300004479	Soil	YIIGIPHFNPVLWSKDELAAVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0066815_100742281	3300005164	Soil	RYIIGIPNFKPVLWSRDDLAAVYVMPYFVRDVASIENLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0066810_101379801	3300005169	Soil	TFKQWIEADPVRPLHEDHARYAAYAVAPLARDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0070676_111890291	3300005328	Miscanthus Rhizosphere	FNRYIIGIPHFNPVLWSKDELAAVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTQDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0068869_1006239331	3300005334	Miscanthus Rhizosphere	GIPNFKPVLWSRDDLAAVYVIPYFVRDVASIENLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0070682_1002235072	3300005337	Corn Rhizosphere	YIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0070661_1014837582	3300005344	Corn Rhizosphere	IDQFDRVRGNYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLARDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0070675_1005469442	3300005354	Miscanthus Rhizosphere	IGIPHFNPVLWSKDELAAVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0070675_1014427482	3300005354	Miscanthus Rhizosphere	AVYVIPYFVRDVASIEHLKVTFRQWIEADPVRTLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPAATLAVHVPV*
Ga0070673_1005005353	3300005364	Switchgrass Rhizosphere	FNRYIIGIPNFKPVLWSRDELAAVYVIPYFVRDVASIENLKVTFKQWIEADPVRPLHQDHARFAAYAVAPLTRDDPMTVGHYAGLPALLDGYHRAVRFWRTSVPAATLTVYVPV*
Ga0070705_1016013702	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0070685_105205391	3300005466	Switchgrass Rhizosphere	RYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0068853_1021687231	3300005539	Corn Rhizosphere	SIENLKVTFKQWIEADPVRPLHQDHARFAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPTATLAVYVPV*
Ga0070686_1007211002	3300005544	Switchgrass Rhizosphere	YIIGIPHFNPVLWSKDELAAVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTQDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAAKLAVYVPV*
Ga0070695_1018505481	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	FDRVRGKYFNRYIIGIPHFNPVLWSKDELAAVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0070665_1009836621	3300005548	Switchgrass Rhizosphere	NPVLWSKDELAAVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0068859_1027477061	3300005617	Switchgrass Rhizosphere	GNYFNRYIIGIPNFKPVLWSRDDLAAVYVLPYFVRDVASLEHLKVTFKQWIEADPVRALHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0068866_102202551	3300005718	Miscanthus Rhizosphere	PVLWSRDDLAAVYVMPYFVRDVASIENLKVTFKQWIEADPVRPLHEDHARYAAYAVAPLARDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPTATLAVYVPV*
Ga0066903_1013866822	3300005764	Tropical Forest Soil	VTFKQWIEAEPVRPLHQDHARYAAYSAAPPTQDDPLTVGKYSELPALLDGYHRAVRFWSRNDPDATLPVYVLFDAKEALHLSDLF*
Ga0070717_108160002	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0075365_102470852	3300006038	Populus Endosphere	WIEADPVRPLHQDHARFAAYRAVPATDNDPMTVGQYSGLPVLLDGYHRSVRFWRTSTPAATLAVYVPD*
Ga0075365_102928403	3300006038	Populus Endosphere	SLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAVSTQDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0075365_104698731	3300006038	Populus Endosphere	PYFVRDVASIEHLKVTFRQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPAATLAVYVPV*
Ga0075365_111880561	3300006038	Populus Endosphere	PNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0075417_107364651	3300006049	Populus Rhizosphere	YFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0068871_1012424232	3300006358	Miscanthus Rhizosphere	YLLIDQFDRVRGNYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0074055_118243612	3300006573	Soil	LIDQFDRVRSTYFNRYIIGIPNFKPVLWSRDDLAAVHVIPYFVRDVSSLEYLKLTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGHYSGLPVLLDGYHRAVRFWRTGVPAATLAVYVPG*
Ga0074056_116269711	3300006574	Soil	LWSRDDLAAVHVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTGVPAATLAVYVPG*
Ga0074060_100150481	3300006604	Soil	VLWSRDDLAAVYVLPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0075434_1011559152	3300006871	Populus Rhizosphere	EHLKVSFKDWIEAEPVRPLHQDHARYAAYGVPHSMRDDPLTLGQYSDVTALLDGYHRAVRFWRIRRPAARLQVYVPV*
Ga0075426_110999631	3300006903	Populus Rhizosphere	IIGIPHFNPVLWSKDELAAVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0075419_105743361	3300006969	Populus Rhizosphere	VDWGKDDLAAVYVISYFVRDVSSIEHLKVSFKDWIEAEPVRPLHQDHARYAAYGVPHSMRDDPLTLGHSGLTALLDGYHRAVRFWRIRRPAARLQVFYVPV*
Ga0075418_103278661	3300009100	Populus Rhizosphere	KDDLAAVYVISYFVRDISSIEHLKVSFKDWIEAEPVRPLHQDHARYAAYGVPHSMRDDPLTLGQYSGLTALLDGYHRAVRFWRIRRPAARLQVFYVPV*
Ga0111538_121953931	3300009156	Populus Rhizosphere	NFKPVLWSRDELAAVYVIPYFVRDVASIEHLKLTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPALLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0075423_117606002	3300009162	Populus Rhizosphere	VYVISYFVRDISSIEHLKVSFKDWIEAEPVRPLHQDHARYAAYGVPHSMRDDPLTLGQYSDVTALLDGYHRAVRFWRIRRPAARLQVYVPV*
Ga0075423_117875251	3300009162	Populus Rhizosphere	ELGKAEHYLLIDQFDRVRGNYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPAATLAVYVPV*
Ga0105249_122813281	3300009553	Switchgrass Rhizosphere	FNRYIIGIPNFKPVLWSPDELAAVYVIPYFVRDVASIENLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPAATLAVYVPV*
Ga0105249_131503421	3300009553	Switchgrass Rhizosphere	NLKVTFKQWIEADPVRPLHEDHARYAAYAVAPLARDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0126381_1029522281	3300010376	Tropical Forest Soil	PYFVRDVSSLEYLKVTFKQWIEAEPVRPLHQDHARYAAYGAAPPTQDDPLAVGKYSDLPALLDGYHRAVRFWSRNDPDATLPVYVPFEAKEALHLSDLF*
Ga0134126_128782791	3300010396	Terrestrial Soil	LKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPALLDGYHRAVRFWRTGAPAATLAVYVPV*
Ga0134122_120635521	3300010400	Terrestrial Soil	YFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMAVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0138513_1000662491	3300011000	Soil	GAYFNRYIIGIPNFKPVLWSRDELAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLPVYVPV*
Ga0150984_1003176752	3300012469	Avena Fatua Rhizosphere	AEQYLLIDQFDRVRGNYFNRYIIGIPNFKPVLWSRDELAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0150984_1230059221	3300012469	Avena Fatua Rhizosphere	SLQHLKVTFKQWIEADPVRPLHQDHARYAAFAAAPPTHDDPMTVGHHSGLPALLDGYHRAVRFWRTGVPAATLAVYVPV*
Ga0157316_10352871	3300012510	Arabidopsis Rhizosphere	KAEHYLLIDQFDRVRGNYFNRYIIGIPNFKPVLWSRDELAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0157289_103652561	3300012903	Soil	DQFDRVRGHYFNRYIIGIPNFKPVLWSRDELAAVYVIPYFVRDVASIENLKVTFKQWIEADPVRPLHQDHARFAAYAVAPLTRDDPMTVGHYAGLPALLDGYHRAVRFWRTSVPAATLTVYVPV*
Ga0164302_101393281	3300012961	Soil	PVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0164308_116255082	3300012985	Soil	QFDRVRGKYFNRYIIGIPHFNPVLWSKDELATVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTQDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0164307_104485892	3300012987	Soil	IEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAAYVPV*
Ga0164307_109102501	3300012987	Soil	IEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMAVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0164305_111023401	3300012989	Soil	LLIDQFDRVRGAYFNRYIIGIPNFKPVLWSRDELAAVHVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRMSVPAATLAVYVPV*
Ga0164305_115864252	3300012989	Soil	FKPVLWSRDDLAAVYVMPYFVRDVASIENLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0157374_100828102	3300013296	Miscanthus Rhizosphere	YLLIDQFDRVRGNYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIENLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0163163_126253902	3300014325	Switchgrass Rhizosphere	VRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPAATLAVYVPV*
Ga0157377_108428091	3300014745	Miscanthus Rhizosphere	LGKAEHYLLIDQFDRVRGKYFNRYIIGIPHFNPVLWSKDELAAVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0173483_107402511	3300015077	Soil	AVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV*
Ga0132256_1018907662	3300015372	Arabidopsis Rhizosphere	FNPVLWSKDELAAVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV*
Ga0132257_1033093521	3300015373	Arabidopsis Rhizosphere	RYAAYGAAPSTQDDPLTVGKYSDLPALLDGYHRAVRFWSRNDPDATLPVYVPFEAKEALHLSDLF*
Ga0182034_104412791	3300016371	Soil	EAEPVRPLHQDHARYAAYGAAPPTQDDPLAVGKYSDLPALLDGYHRAVRFWSRNDPDATLPVYVPFEAKEALHLSDLF
Ga0190266_100118921	3300017965	Soil	KPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFRQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLPVYVPV
Ga0184604_102142361	3300018000	Groundwater Sediment	QFDRVRGKYFNRYIIGIPNFKPVIWSRDDLAAVYVIPYFVRDVSSIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTGVPAATLAVYVPG
Ga0184605_102239162	3300018027	Groundwater Sediment	YFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0184620_100098574	3300018051	Groundwater Sediment	YIIGIPNFKPVLWSRDELAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTGVPAATLAVYVPG
Ga0184633_105234132	3300018077	Groundwater Sediment	VRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0184639_100524451	3300018082	Groundwater Sediment	HYLLIDQFDRVRGNYFNRYIIGIPNFKPVLWSREDLAAVYVIPYSVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGFYSGLPVLLDGYHRAVRFWRTSVPTTLAVYVPV
Ga0184628_104183672	3300018083	Groundwater Sediment	FNRYIIGIPNFKPVRWSRDDLAAVHVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGHYSGLPVLLDGYHRAVRFWRTGVPAALAVYVPV
Ga0190268_103140482	3300018466	Soil	DVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPAATLAVYVPV
Ga0190270_121061472	3300018469	Soil	VIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV
Ga0190274_123410102	3300018476	Soil	RGNYFNRYIIGIPNFKPVLWSRDDLAAVYVMPYFVRDVASIENLKVTFKQWIEADPVRSLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVP
Ga0193704_10663481	3300019867	Soil	IIGIPNFKPVLWSRDDLAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTGVPAATLAVYVPG
Ga0193699_100520551	3300021363	Soil	DQFDRVRGNYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0222622_105040332	3300022756	Groundwater Sediment	LIDQFDRVRGNYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFRQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLPVYVPV
Ga0222622_110030321	3300022756	Groundwater Sediment	SLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTGVPAATLAVYVPG
Ga0222622_112883692	3300022756	Groundwater Sediment	RQWIEADPVRPLHQDHARYAAYAVAPLTRDNPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLPVYVPV
Ga0207685_108268661	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	NYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV
Ga0207644_114867331	3300025931	Switchgrass Rhizosphere	PYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV
Ga0207640_117262891	3300025981	Corn Rhizosphere	GTLSLIDQFDRVRGNYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV
Ga0207703_103968641	3300026035	Switchgrass Rhizosphere	HLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV
Ga0207702_115395992	3300026078	Corn Rhizosphere	PNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV
Ga0207983_10278801	3300027310	Soil	WSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV
Ga0208890_10840251	3300027523	Soil	IPNFKPVLWSRDDLAAVYVMPYFVRDVASIENLKVTFKQWIEADPVRPLHEDHARYAAYAVAPLARDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV
Ga0207981_10448582	3300027560	Soil	NFKPVLWSRDELAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPTATLAVYVPV
Ga0209814_102709341	3300027873	Populus Rhizosphere	VYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV
Ga0307295_100733392	3300028708	Soil	PYFVRDVASIEHLKVTFRQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLPVYVPV
Ga0307295_101989461	3300028708	Soil	YFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307322_100516341	3300028710	Soil	VYVIPYFVRDVASIEHLKVTFRQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLPVYVPV
Ga0307285_100156521	3300028712	Soil	NRYIIGIPNFKPVLWSRDELAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTGVPAATLAVYVPG
Ga0307311_100701521	3300028716	Soil	IPNFKPVLWSRDDLAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307280_101228121	3300028768	Soil	VRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307280_103262471	3300028768	Soil	IPNFKPVLWSRDDLAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307323_100024983	3300028787	Soil	EHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307283_101427111	3300028790	Soil	PVLWSRDELAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307299_100424192	3300028793	Soil	LWSRDDLAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307299_103623181	3300028793	Soil	LLIDQFDRVRGKYFNRYIIGIPNFKPVIWSRDDLAAVYVIPYFVRDVSSIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV
Ga0307305_102968252	3300028807	Soil	FVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307305_103620161	3300028807	Soil	VSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTGVPAATLAVYVPG
Ga0307294_100478682	3300028810	Soil	AVYVIPYFVRDVASIEHLKVTFRQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLPVYVPV
Ga0307294_101868871	3300028810	Soil	NRYIIGIPNFKPVLWSRDELAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0247825_105618631	3300028812	Soil	FKPVLWSRDDLAAVYVMPYFVRDVASIENLKVTFKQWIEADPVRPLHEDHARYAAYAVAPLARDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPTATLAVYVPV
Ga0307302_100171611	3300028814	Soil	HYLLIDQFDRVRGNYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307296_107771932	3300028819	Soil	RPVLWSRDDLAAVHVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307310_101492831	3300028824	Soil	VLWSRDDLAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307312_102105811	3300028828	Soil	DQFDRVRGNYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFRQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLPVYVPV
Ga0307312_103190951	3300028828	Soil	DVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0307300_101978721	3300028880	Soil	RYIIGIPNFKPVLWSRDELAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGFYSGLPVLLDGYHRAVRFWRTGVPAATLAVYVPG
Ga0307277_102357812	3300028881	Soil	DLAAVYVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPG
Ga0308202_11287672	3300030902	Soil	AVYVIPYFVRDVSSLQHLKVTFKQWIEADPVRPLHQDHARYAAFAAAPPTHDDPMTVGHHSGLPALLDGYHRAVRFWRTGVPAATLAVYVPV
Ga0318534_106613832	3300031544	Soil	YLKVTFKQWIEAEPVRPLHQDHARYAAYGAAPPTQDDPLAVGKYSDLPALLDGYHRAVRFWSRNDPDATLPVYVPFEAKEALHLSDLF
Ga0318541_100370653	3300031545	Soil	VTFKQWIEAEPVRPLHQDHARYAAYGAAPPTQDDPLTVGKYSDLPALLDGYHRAVQFWSRNDPDATLPVYVPFEAKEALHLSDLF
Ga0318571_100407492	3300031549	Soil	VTFKQWIEAEPVRPLHQDHARYAAYGAAPPTQDDPLAVGKYSDLPALLDGYHRAVRFWSRNDPDATLPVYVPFEAKEALHLSDLF
Ga0310915_101597001	3300031573	Soil	SLEYLKVTFKQWIEAEPVRPLHQDHARYAAYGAAPPTQDDPLTVGKYSDLPALLDGYHRAVQFWSRNDPDATLPVYVPFEAKEALHLSDLF
Ga0310915_103234243	3300031573	Soil	SLEYLKVTFKQWIEAEPVRPLHQDHARYAAYGAAPPTQDDPLAVGKYSDLPALLDGYHRAVRFWSRNDPDATLPVYVPFEAKEALHLSDLF
Ga0318537_101088113	3300031763	Soil	GIASFQLVRWTRDNLAAVHVIPYFVRDVSSLEYLKVTFKQWIEAEPVRPLHQDHARYAAYGAAPPTQDDPLAVGKYSDLPALLDGYHRAVRFWSRNDPDATLPVYVPFEAKEALHLSDLF
Ga0310900_104360702	3300031908	Soil	QFDRVRGKYFNRYIIGIPHFNPVLWSKDELAAVYVLPYFVRDVSSLEHLKVTFKEWIEADPVRPLHQDHARYAAYGAAASTADAMTVGHYSGLPVLLDGYHRAVRFWRTSVPAATLAVYVPV
Ga0310897_101524611	3300032003	Soil	QFDRVRGNYFNRYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPTATLAVYVPV
Ga0318570_106019082	3300032054	Soil	KQWIEAEPVRPLHQDHARYAAYGAAPPTQDDPLTVGKYSDLPALLDGYHRAVQFWSRNDPDATLPVYVPFEAKEALHLSDLF
Ga0318577_102210501	3300032091	Soil	FKQWIEAEPVRPLHQDHARYAAYGAAPPTQDDPLAVGKYSDLPALLDGYHRAVRFWSRNDPDATLPVYVPFEAKEALHLSDLF
Ga0307470_119165051	3300032174	Hardwood Forest Soil	FNRYIIGIPNFKPVLWSRDDLAAVHVIPYFVRDVSSLEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPATRDDPMTVGYYSGLPVLLDGYHRAVRFWRMSVPAATLAVYVPV
Ga0306920_1006557583	3300032261	Soil	LKVTFKQWIEAEPVRPLHQDHARYAAYGAAPPTQDDPLTVGKYSDLPALLDGYHRAVQFWSRNDPDATLPVYVPFEAKEALHLSDLF
Ga0247830_102467321	3300033551	Soil	LKVTFKQWIEADPVRPLHQDHARYAAYAVAPLARDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV
Ga0247830_106802202	3300033551	Soil	RYIIGIPNFKPVLWSRDDLAAVYVIPYFVRDVASIEHLKVTFKQWIEADPVRPLHQDHARYAAYAVAPLTRDDPMTVGHYSGLPVLLDGYHRAVRFWRTSAPTATLAVYVPV
Ga0364929_0058635_1_261	3300034149	Sediment	YFVRDVASIENLKVTFKQWIEADPVRPLHEDHARYAAYAVAPLARDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPTATLAVYVPV
Ga0364933_039700_934_1155	3300034150	Sediment	VTFKQWIEADPVRPLHEDHARYAAYAVAPLARDDPMTVGHYSGLPVLLDGYHRAVRFWRTSVPTATLAVYVPV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068884

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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