Metagenome / Metatranscriptome Family F068907

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068907
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	60 residues
Representative Sequence	MDPSGIAQIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELRSELHRIANP
Number of Associated Samples	93
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.52 %
% of genes near scaffold ends (potentially truncated)	20.16 %
% of genes from short scaffolds (< 2000 bps)	78.23 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.710 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (22.581 % of family members)
Environment Ontology (ENVO)	Unclassified (60.484 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (43.548 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.95% β-sheet: 0.00% Coil/Unstructured: 42.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.7.7.1: BAG domain	d3ldqb1	3ldq	0.85719
a.25.1.3: Manganese catalase (T-catalase)	d1o9ia_	1o9i	0.8443
a.118.1.0: automated matches	d4xria_	4xri	0.84028
a.29.3.0: automated matches	d4hr3a2	4hr3	0.83654
a.47.1.1: STAT	d1uura1	1uur	0.83595

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF01018	GTP1_OBG	31.45
PF01016	Ribosomal_L27	25.00
PF01926	MMR_HSR1	12.10
PF00829	Ribosomal_L21p	6.45
PF00834	Ribul_P_3_epim	2.42
PF00072	Response_reg	0.81
PF00106	adh_short	0.81
PF06386	GvpL_GvpF	0.81
PF02801	Ketoacyl-synt_C	0.81
PF13525	YfiO	0.81
PF02457	DAC	0.81
PF12706	Lactamase_B_2	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0536	GTPase involved in cell partioning and DNA repair	Replication, recombination and repair [L]	31.45
COG0211	Ribosomal protein L27	Translation, ribosomal structure and biogenesis [J]	25.00
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	6.45
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	2.42

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.71 %
Unclassified	root	N/A	36.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.71 %
Unclassified	root	N/A	36.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.71 %
Unclassified	root	N/A	36.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.29 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.29 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.29 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.29 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.42 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.42 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10022167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3896	Open in IMG/M
3300000567\|JGI12270J11330_10136323	Not Available	957	Open in IMG/M
3300000567\|JGI12270J11330_10178933	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300003219\|JGI26341J46601_10102102	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300004152\|Ga0062386_100447763	Not Available	1044	Open in IMG/M
3300004152\|Ga0062386_100831497	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300004477\|Ga0068971_1549396	Not Available	933	Open in IMG/M
3300005994\|Ga0066789_10000004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	49601	Open in IMG/M
3300005995\|Ga0066790_10089039	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300006052\|Ga0075029_100121546	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300006052\|Ga0075029_100185458	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300006052\|Ga0075029_100429841	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300006052\|Ga0075029_100820556	Not Available	634	Open in IMG/M
3300006055\|Ga0097691_1017691	All Organisms → cellular organisms → Bacteria	3193	Open in IMG/M
3300006059\|Ga0075017_100353293	Not Available	1095	Open in IMG/M
3300006059\|Ga0075017_100552498	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300006162\|Ga0075030_100479272	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300006354\|Ga0075021_10742109	Not Available	632	Open in IMG/M
3300008787\|Ga0103640_1000882	Not Available	726	Open in IMG/M
3300009521\|Ga0116222_1335547	Not Available	655	Open in IMG/M
3300009524\|Ga0116225_1118581	Not Available	1219	Open in IMG/M
3300009525\|Ga0116220_10189734	Not Available	889	Open in IMG/M
3300009623\|Ga0116133_1102182	Not Available	730	Open in IMG/M
3300009624\|Ga0116105_1092677	Not Available	747	Open in IMG/M
3300009628\|Ga0116125_1027637	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300009643\|Ga0116110_1088245	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300009643\|Ga0116110_1212420	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300009665\|Ga0116135_1128798	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300009762\|Ga0116130_1113539	Not Available	852	Open in IMG/M
3300009764\|Ga0116134_1050514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1590	Open in IMG/M
3300009824\|Ga0116219_10482337	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300010339\|Ga0074046_10000055	All Organisms → cellular organisms → Bacteria	91378	Open in IMG/M
3300010341\|Ga0074045_10041199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3399	Open in IMG/M
3300010341\|Ga0074045_10150628	All Organisms → cellular organisms → Bacteria → Acidobacteria	1580	Open in IMG/M
3300010343\|Ga0074044_10025351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4230	Open in IMG/M
3300010343\|Ga0074044_10470499	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300010343\|Ga0074044_10952948	Not Available	562	Open in IMG/M
3300010379\|Ga0136449_101543468	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300014159\|Ga0181530_10130457	Not Available	1458	Open in IMG/M
3300014168\|Ga0181534_10748458	Not Available	574	Open in IMG/M
3300014200\|Ga0181526_10858205	Not Available	571	Open in IMG/M
3300014493\|Ga0182016_10041763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3691	Open in IMG/M
3300014498\|Ga0182019_10426152	Not Available	908	Open in IMG/M
3300014499\|Ga0182012_10485384	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300014501\|Ga0182024_10002806	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	42667	Open in IMG/M
3300014502\|Ga0182021_10471605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1495	Open in IMG/M
3300014657\|Ga0181522_10530136	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300014839\|Ga0182027_10900310	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300016702\|Ga0181511_1327108	Not Available	507	Open in IMG/M
3300017823\|Ga0187818_10106633	Not Available	1213	Open in IMG/M
3300017823\|Ga0187818_10243695	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300017933\|Ga0187801_10344094	Not Available	613	Open in IMG/M
3300017934\|Ga0187803_10037801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1916	Open in IMG/M
3300017938\|Ga0187854_10379498	Not Available	595	Open in IMG/M
3300017941\|Ga0187850_10199722	Not Available	916	Open in IMG/M
3300017943\|Ga0187819_10206808	Not Available	1157	Open in IMG/M
3300017943\|Ga0187819_10215975	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300017946\|Ga0187879_10060018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2223	Open in IMG/M
3300017946\|Ga0187879_10355250	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300017946\|Ga0187879_10405659	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300017948\|Ga0187847_10101323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1589	Open in IMG/M
3300017948\|Ga0187847_10302371	Not Available	874	Open in IMG/M
3300017948\|Ga0187847_10405437	Not Available	750	Open in IMG/M
3300017972\|Ga0187781_10144138	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300017975\|Ga0187782_10107628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2054	Open in IMG/M
3300017975\|Ga0187782_10216871	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300018001\|Ga0187815_10114112	Not Available	1140	Open in IMG/M
3300018009\|Ga0187884_10232508	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300018009\|Ga0187884_10433669	Not Available	528	Open in IMG/M
3300018016\|Ga0187880_1091199	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300018030\|Ga0187869_10454366	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300018033\|Ga0187867_10720180	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300018034\|Ga0187863_10012992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5299	Open in IMG/M
3300018034\|Ga0187863_10018451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4300	Open in IMG/M
3300018034\|Ga0187863_10021642	All Organisms → cellular organisms → Bacteria	3910	Open in IMG/M
3300018034\|Ga0187863_10400081	Not Available	765	Open in IMG/M
3300018035\|Ga0187875_10027575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3414	Open in IMG/M
3300018037\|Ga0187883_10466739	Not Available	649	Open in IMG/M
3300018038\|Ga0187855_10739297	Not Available	573	Open in IMG/M
3300018042\|Ga0187871_10258012	Not Available	967	Open in IMG/M
3300018042\|Ga0187871_10311608	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300018042\|Ga0187871_10436407	Not Available	724	Open in IMG/M
3300018043\|Ga0187887_10225912	Not Available	1111	Open in IMG/M
3300018043\|Ga0187887_10616951	Not Available	640	Open in IMG/M
3300018057\|Ga0187858_10457830	Not Available	785	Open in IMG/M
3300018062\|Ga0187784_11055637	Not Available	645	Open in IMG/M
3300019082\|Ga0187852_1306631	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300019278\|Ga0187800_1118043	Not Available	629	Open in IMG/M
3300022881\|Ga0224545_1002432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3390	Open in IMG/M
3300023090\|Ga0224558_1001943	All Organisms → cellular organisms → Bacteria	20167	Open in IMG/M
3300025509\|Ga0208848_1066580	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300025527\|Ga0208714_1059711	Not Available	809	Open in IMG/M
3300026291\|Ga0209890_10000067	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	48439	Open in IMG/M
3300027432\|Ga0209421_1008163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1965	Open in IMG/M
3300027570\|Ga0208043_1015123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2518	Open in IMG/M
3300027812\|Ga0209656_10019918	All Organisms → cellular organisms → Bacteria	4111	Open in IMG/M
3300027854\|Ga0209517_10093009	All Organisms → cellular organisms → Bacteria → Acidobacteria	2054	Open in IMG/M
3300027854\|Ga0209517_10255699	Not Available	1046	Open in IMG/M
3300027894\|Ga0209068_10790311	Not Available	558	Open in IMG/M
3300027898\|Ga0209067_10825352	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300027905\|Ga0209415_10032952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7354	Open in IMG/M
3300027905\|Ga0209415_10186417	All Organisms → cellular organisms → Bacteria → Acidobacteria	1992	Open in IMG/M
3300027911\|Ga0209698_10164376	Not Available	1813	Open in IMG/M
3300027911\|Ga0209698_10255417	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300027911\|Ga0209698_10481667	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300027911\|Ga0209698_10682126	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300028560\|Ga0302144_10070054	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300028909\|Ga0302200_10016996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4820	Open in IMG/M
3300029903\|Ga0247271_122463	Not Available	714	Open in IMG/M
3300029920\|Ga0302142_1082883	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300029985\|Ga0302280_1056095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1634	Open in IMG/M
3300029994\|Ga0302283_1267063	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300030494\|Ga0310037_10082945	Not Available	1499	Open in IMG/M
3300030707\|Ga0310038_10020792	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4093	Open in IMG/M
3300030707\|Ga0310038_10170153	Not Available	1064	Open in IMG/M
3300031247\|Ga0265340_10031448	All Organisms → cellular organisms → Bacteria → Acidobacteria	2654	Open in IMG/M
3300031249\|Ga0265339_10023699	All Organisms → cellular organisms → Bacteria → Acidobacteria	3547	Open in IMG/M
3300031711\|Ga0265314_10041693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3282	Open in IMG/M
3300031718\|Ga0307474_11135067	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300033405\|Ga0326727_10541515	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300033823\|Ga0334837_065460	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300033826\|Ga0334847_005921	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300034124\|Ga0370483_0003680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4174	Open in IMG/M
3300034282\|Ga0370492_0105923	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.58%
Host-Associated	Host-Associated	2.42%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	52.42%
Terrestrial	Environmental → Terrestrial	45.16%
Plants	Host-Associated → Plants	2.42%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	41.13%
Soil	Environmental → Terrestrial → Soil	37.10%
Sediment	Environmental → Aquatic → Sediment	11.29%
Peat	Environmental → Terrestrial → Peat	8.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.42%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	41.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	17.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.42%
Loam	Environmental → Terrestrial → Soil → Loam	0.81%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	29.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.06%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.26%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	22.58%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	13.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	11.29%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.65%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.84%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.23%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.23%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.23%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.42%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.42%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.42%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.61%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.61%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Wetland Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004477	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300008787	Microbial communities from wetland soil in Czech Republic - R3_cDNA	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029994	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100221673	3300000567	Peatlands Soil	MDPSGIAQIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAEVRSELHRIANPTE*
JGI12270J11330_101363233	3300000567	Peatlands Soil	MDPTEVARIALELCDLLQLQLDSILGRKLTDFTPGELDAYQKRKSRIAELHSELHRLANPT*
JGI12270J11330_101789331	3300000567	Peatlands Soil	MDPNGIAQIAFELCDLLQLQLDSTMGRKLTDFTPDELDAYQKRKSRIAEV
JGI26341J46601_101021022	3300003219	Bog Forest Soil	MDPSRISLIALELCDLLQLQLDSVMGRKLTDFTPDELDAYQKRKSRIAELRSELNRVAHPPQ*
Ga0062386_1004477633	3300004152	Bog Forest Soil	MDPSDIAQLALELSDLLQLQLDSIMGRNLADFPPGELDAYQKRKSRIAELRTELHRLANPT*
Ga0062386_1008314972	3300004152	Bog Forest Soil	MDPSGIAQIALELCDLLQLQLDSIMGRKLTDFTPDDLGAYQKRKSRIAQLRSELHRLANPT*
Ga0068971_15493961	3300004477	Peatlands Soil	MDPNGIAQIAFELCDLLQLQLDSTMGRKLTDFTPDELDAYQKRKSRIAEVRSELHRIANPTE*
Ga0066789_1000000427	3300005994	Soil	MDSSGIAQIALKVCDLLQLQLDSIVGRKLTDFTPEESGAYQKRKSRIAELHSELRRLANAE*
Ga0066790_100890392	3300005995	Soil	LNNGVESIGIAQIAHEVCDLLQLQLDALMNRKFTDFTPEELEAYRTRKSRIAELRSEMPRLVNPI*
Ga0075029_1001215464	3300006052	Watersheds	MDPSGITAIALELCDLLQLQLDSIMGRKLTEFTPQELDAYRKRKSRIAELRSELHRLANPT*
Ga0075029_1001854582	3300006052	Watersheds	MDPSGIAHIALELCDLLQLQLDSIMGRKLTEFTPDELNTYQKRKSRIAELRSELHRFANPT*
Ga0075029_1004298412	3300006052	Watersheds	MDPTGIAHIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELRSELHRFANPT*
Ga0075029_1008205563	3300006052	Watersheds	MDPSGIAQIALEVCDLLQLQLDSIVGRKFTDFTPAEVNAYEKRKSRIAELRSELHHLANAAPRTATRGLKLTSDCHAER*
Ga0097691_10176915	3300006055	Arctic Peat Soil	MDSSGIAQIALKVCDLLQLQLDSIVGRKLTDFTPEESGAYQKRKSRIAELRSELRRLANAE*
Ga0075017_1003532931	3300006059	Watersheds	MDPSGIAQIALEVCDLLQLQLDSIMGRKLTDLTPEELDAYQKRKSRIAQLRSELHQLATRT*
Ga0075017_1005524983	3300006059	Watersheds	MDPSGIAQIALEVCDLLQLQLDSIMGRELTDFTPEELDTYQKRKSRIAELRSELHRLANPT*
Ga0075030_1004792722	3300006162	Watersheds	MAQMAQIAHEVCDLLQLQLDSIMGRKLTDFTPEEVNAYKKRKARIAELRFRLHQLADAA*
Ga0075021_107421092	3300006354	Watersheds	MDSRGAAQIALEVCELMQLQLDTIMGRKLSDLTKEELDAYQKRKSRIAELRTELHQIAHPS*
Ga0103640_10008823	3300008787	Wetland Soil	MNPSEIARVSLELCDLLQLQLDSIMGRNLTDFTPDELDAYQKRRSRIAELRSELHRLANPT*
Ga0116222_13355471	3300009521	Peatlands Soil	MDPSGITAIALELCDLLQLQLDSIMGRKLTEFTPDELDAYQKRKSRIADLRSELHRLANPT*
Ga0116225_11185812	3300009524	Peatlands Soil	MDPNGIAQIAFELCDLLQLQLDSTMGRKLTDFTPDELDAYQKRKSRIAEVRSELHRIANP
Ga0116220_101897343	3300009525	Peatlands Soil	MDPNGIAQIAFELCDLLQLQLDSIMGRKLTDFTPDQLDAYQKRKSRIAEVRSELHRIANPTE*
Ga0116133_11021821	3300009623	Peatland	MDPTDVAHIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELQSELHRLADPT*
Ga0116105_10926772	3300009624	Peatland	MDPSGIAQIALELCDLLQLQLDSITGRKLTDFTANELDAYQKRKSRIAELRSELHRLANPT*
Ga0116125_10276372	3300009628	Peatland	MDPTDVAHIALELCDLLQLQLDSIMGRKLTDFTPDELEAYQNRKSRIAEWQSELHRHANPT*
Ga0116110_10882452	3300009643	Peatland	MDPSGIAQIAFELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELRSELHRIANPTE*
Ga0116110_12124202	3300009643	Peatland	MDPSGIAPIALELCDLLQLQLDSIMGRKLADFTPDELDAYQKRKSRIAELRSELHRLANPT*
Ga0116135_11287982	3300009665	Peatland	MDPTDVAHIALELCDLLQLQLDSIMGRKLTDFTPDELEAYQNRKSRIAEWQSELHRLANPT*
Ga0116130_11135393	3300009762	Peatland	MDPSGIAPIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELRSELHRLANPT*
Ga0116134_10505141	3300009764	Peatland	MDPSGIAHIALELCDLLQLQLDSIMGRKLTDFTPDELDLYQKRKSRIAELRSELHRFANPI*
Ga0116219_104823372	3300009824	Peatlands Soil	MDPSGIAQIAFELCDLLQLQLDSIMGRKLTDFTPDQLDAYQKRKSRIAELRSKLQRIANA
Ga0074046_100000554	3300010339	Bog Forest Soil	MDPTDVAHIALELCDFLQLQLNSIMGRKLTDFTADELDAYQKRKSRIAELHSELRRLANPI*
Ga0074045_100411993	3300010341	Bog Forest Soil	MDPSGIAQIALELCDLLQLQLDSIMGRKLTDFTPHELEAYQKRKSRIAKLRSELHWLANPT*
Ga0074045_101506282	3300010341	Bog Forest Soil	MDHSSIAQIAFELSDLLQLQLDSMMGRGLTGFTPHELDAYQRRNSRIADLRAELHRFANPK*
Ga0074044_100253518	3300010343	Bog Forest Soil	MDPSGIAQIAPEVCDLLQLQLDSIMGRRLTDFTPEEVDIYEKRKARIAELRSRLRELVRVA*
Ga0074044_104704992	3300010343	Bog Forest Soil	MDTRGIAQVALEACDLLQVQLDSIMGRKLSDFTPEELDAYQKRKRRIAELRDEVHRLANPT*
Ga0074044_109529481	3300010343	Bog Forest Soil	MDPSGIAQIAFELCDLLQLQLDSITGRKLTDFTPDELDAYQKRKSRIAELRSELHRIANPT*
Ga0136449_1015434683	3300010379	Peatlands Soil	MDPSGIAQIAFELCDLLQLQLDSIMGRKLTDFTPDQLDAYQKRKSRIAELRSKLQRIANAA*
Ga0181530_101304572	3300014159	Bog	MDPNGIAQIAFELCDLLQLQLDSIMGRKLTDFTPDELGTYQKRKSRIAELRSELHRIANPT*
Ga0181534_107484582	3300014168	Bog	MDPSGIAQIALELCDLLQLQLDSITGRKLTDFTPNELDAYQKRKSRIAELRSELHRLANPT*
Ga0181526_108582052	3300014200	Bog	MDPSGIAQIALELCDLLQLQLDSITGRTLTDFTPNELDAYQKRKSRIAELRSELHRIANPT*
Ga0182016_100417637	3300014493	Bog	MNSKDVAQIAVEVCDLLQMQLDSIISRSLSDFTPEELGAYQKRKSRIEELRSELHRLANPV*
Ga0182019_104261521	3300014498	Fen	MDPSGIAQLALELCDLLQLQLDSIMGCKLADFTPDELDAYQKRKSRIEELRFELRRLANPSSRTLFGD*
Ga0182012_104853842	3300014499	Bog	MNSKDVAQIAVEVCDLLQMQLDSIISRSLSDFTPEELGAYQKRKSRIEELRSELHRLANPI*
Ga0182024_1000280614	3300014501	Permafrost	MDPSRTARIALELCDLLQLQLDSIINRKLTEFTPDELDAYQKRKSRIAELRAELHRIANPI*
Ga0182021_104716052	3300014502	Fen	MDPSGIAQLALELCDLLQLQLDSIMGCKLADFTPNELDAYQKRKSRIEELRFELRRLAHPS*
Ga0181522_105301361	3300014657	Bog	MDPSGIALIALELCDLLQLQLDSIIDRKLSEFTPDELVAYRKRKSPIAELRAELHRI
Ga0182027_109003102	3300014839	Fen	MDPSGIAPIALELCDLLQLQLDSIMGRELTDFTPDELDAYQKRKSRIAELRSELHRLANPT*
Ga0181511_13271082	3300016702	Peatland	MDPSGIAPIALELCDLLQLQLDSIVGRTLTGFTPDELTAYQKRKSRIAELRSELHRLANP
Ga0187818_101066331	3300017823	Freshwater Sediment	QIALELCDLLQLQLDSLMRRRLTDFTPEEMNAYQKRKSRIAELLSELHRIANPT
Ga0187818_102436951	3300017823	Freshwater Sediment	MDPSGIAQIALELCDLLQLQLDSLMRRRLTDFTPEEMNAYQKRKSRIAELLSELHRLANP
Ga0187801_103440941	3300017933	Freshwater Sediment	MDPSGIAQIALELCDLLQLQLDSIMRRKLTDFTPEEMNAYQKRKSRIAELLSELHRLANP
Ga0187803_100378014	3300017934	Freshwater Sediment	MDPSGIAQIALELCDLLQLQLDSIMRRKLTDFTPEEMNAYQKRQSRIAELLSELHRLANP
Ga0187854_103794981	3300017938	Peatland	MDPTDVAHIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELRSELHRFANP
Ga0187850_101997221	3300017941	Peatland	MDPSGIAHIALELCDLLQLQLDSIMGRKLTDFTPDELDLYQKRKSRIAELRSELHRFANP
Ga0187819_102068083	3300017943	Freshwater Sediment	PSGIAQIALELCDLLQLQLDSIMRRRLTDFTAEEMNAYQKRQSRIAELLSELHRIANPT
Ga0187819_102159753	3300017943	Freshwater Sediment	MDPSGIAQIALELCDLLQLQLDSLMRRRLTDFTPEEMNAYQKRKSRIAEMLSELHRIANP
Ga0187879_100600182	3300017946	Peatland	MAIEICDLLQTQLDALSGRKLTDFTPDELDAYQKRKSRIAELRAELHRFAYPT
Ga0187879_103552501	3300017946	Peatland	MDPSGIAQIAFELCDLLQLQLDPITGRKLTDFTPDELDAYQKRKSRIAELRSELHRIANPTY
Ga0187879_104056592	3300017946	Peatland	MDPTDVAHIALELCDLLQLQLDSIMGRKLTDFTPDELEAYQNRKSRIAEWQSELHRLANP
Ga0187847_101013235	3300017948	Peatland	MDPSGIAQIALELCDLLQLQLDSITGRKLTDFTPNELDAYQKRKSRIAELRSELHRLANP
Ga0187847_103023713	3300017948	Peatland	CMDPTDVAHIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELQSELHRLADPT
Ga0187847_104054371	3300017948	Peatland	MWGMDPSEIAQIALEVCDLLQLQLDSIMGRKLTDFTPQELDAYQKRKSRIAELRSQLRRFADKA
Ga0187781_101441382	3300017972	Tropical Peatland	MKPSEIAQIALEACDLMQQQLDSVLGRKLADFTPEEVAAYQKRKTRIADLLSRVRELANT
Ga0187782_101076284	3300017975	Tropical Peatland	MKPSEIAQIALEACDLMQQQLDSVLGRKLTDFTPEEVAAYQKRKTRIAELLSRVHELANT
Ga0187782_102168712	3300017975	Tropical Peatland	MKPSEIAQIALEVCDLMQQQLDSILGRKLTDFTPEEVAAYQKRKARIAELLSRVRELANA
Ga0187815_101141124	3300018001	Freshwater Sediment	ALELCDLLQLQLDSIMRRRLTDFTAEEMNAYQKRQSRIAELLSELHRIANPT
Ga0187884_102325082	3300018009	Peatland	MAIEICDLLQTQLDALSGRKLTDFTPDELDAYQKRKSRIAELRSELHRLANPT
Ga0187884_104336692	3300018009	Peatland	MDPSGIALIALELCDLLQLQLDSIIDRKLSEFTPDELVAYRTRKSRIAELRAELHRIANP
Ga0187880_10911992	3300018016	Peatland	MDPSGIAHIALELCDLLQLQLDSIMGRKLADFTPDELDAYQKRKSRIAELRSELHRLANP
Ga0187869_104543662	3300018030	Peatland	MDPTEVARIALELCDLLQLQLDSILGRKLTDFTPGELDAYRKRKSRIAELCSELHRLANS
Ga0187867_107201802	3300018033	Peatland	MDPSGIAQIAFELCDLLQLQLDSITGRKLTDFTPDELDAYQKRKSRIAELRSELHRIANP
Ga0187863_100129926	3300018034	Peatland	MNPSRTALIALELCDLLQLQLDSIIDRKLTEFTPDELDAYQKRKSRIAELRAELHRIANP
Ga0187863_100184514	3300018034	Peatland	MDPTDVAHIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELQSELHRLADP
Ga0187863_100216424	3300018034	Peatland	MNPSEIGAVALELCDLLQVQLDSIKGRKSADFTPEESDVYRKRKSRIAELRFQLRQAAKL
Ga0187863_104000811	3300018034	Peatland	MDPSSIAPIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELRSELHRFANP
Ga0187875_100275755	3300018035	Peatland	MDPTDVAHIALELCDLLQLQLDSIMGRKLTDFTPDELEAYQNRKSRIAELQSELHRLADP
Ga0187883_104667393	3300018037	Peatland	LSGGIRMNPSRTALIALELCDLLQLQLDSIIDRKLTEFTPDELDAYQKRKSRIAELRAELHRIANPI
Ga0187855_107392971	3300018038	Peatland	QIALELCDLLQLQLDSIMSRKLSDFTPQEVDTYQKRKSRIAELRAELQRLANPI
Ga0187871_102580121	3300018042	Peatland	MDPSGIALIALELCDLLQLQLDSIIDRKLSEFTPDELVAYRKRKSRIAELRAELHRIANP
Ga0187871_103116082	3300018042	Peatland	MDPTDVAHIALELCDLLQLQLDSIMGRKLTDFTPDELEAYQNRKSRIAEWQSELHRHANP
Ga0187871_104364072	3300018042	Peatland	MDPSGIAQIALELCDLLQLQLDSITGRKLTDFTANELDAYQKRKSRIAELRSELHRLANP
Ga0187887_102259122	3300018043	Peatland	MDPTDVAHIALELCDLLQLQLDSIMGRKLTDFTPDELEAYQNRKSRIAEWQSELHRLADP
Ga0187887_106169513	3300018043	Peatland	IAQIALELCDLLQLQLDSIMSRKLSDFTPQEVDTYQKRKSRIAELRAELQRLANPI
Ga0187858_104578301	3300018057	Peatland	MDPSGIAQIALELCDLLQLQLDSITGRKLTDFTPNELDAYQKRKSRIAELRSELHRIANPTY
Ga0187784_110556372	3300018062	Tropical Peatland	MKPSEIAQIALEVCDLMQQQLDSVLGRKLADFTPEEVAAYQKRKARIAELLSRVRELAKA
Ga0187852_13066312	3300019082	Peatland	MDPSGIAQIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELRSELHRIANP
Ga0187800_11180433	3300019278	Peatland	VAQIAAEVCDLMQQQLDSILGRKLTDFTPEEVAAYQKRKARIAELISRVRELANAA
Ga0224545_10024322	3300022881	Soil	MDPSRTARIALELCDLLQLQLDSIINRKLTEFTPDELDAYQKRKSRIAELRAELHRIANP
Ga0224558_10019436	3300023090	Soil	MDPNGIAQIAFELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELRSELHRIANP
Ga0208848_10665802	3300025509	Arctic Peat Soil	MDSSGIAQIALKVCDLLQLQLDSIVGRKLTDFTPEESGAYQKRKSRIAELRSELRRLANA
Ga0208714_10597111	3300025527	Arctic Peat Soil	MDSSGIAQIALKVSDLLQLQLDSIVGRKLTDFTPEESGAYQKRKSRIAELRSELRRLANA
Ga0209890_1000006719	3300026291	Soil	MDSSGIAQIALKVCDLLQLQLDSIVGRKLTDFTPEESGAYQKRKSRIAELHSELRRLANA
Ga0209421_10081633	3300027432	Forest Soil	MDPSSIAPIALELCDLLQRQLDSIMGRKLTDFTPGELDAYQKRKSRIAELRFELHRLANP
Ga0208043_10151233	3300027570	Peatlands Soil	MDPSGIAQIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAEVRSELHRIANPTE
Ga0209656_100199182	3300027812	Bog Forest Soil	MDPSRISLIALELCDLLQLQLDSVMGRKLTDFTPDELDAYQKRKSRIAELRSELNRVAHPPQ
Ga0209517_100930091	3300027854	Peatlands Soil	MDPNGIAQIAFELCDLLQLQLDSTMGRKLTDFTPDELDAYQKRKSRIAEVRSELHRI
Ga0209517_102556992	3300027854	Peatlands Soil	MDPTEVARIALELCDLLQLQLDSILGRKLTDFTPGELDAYQKRKSRIAELHSELHRLANP
Ga0209068_107903111	3300027894	Watersheds	MDSRGAAQIALEVCELMQLQLDTIMGRKLSDLTKEELDAYQKRKSRIAELRTELHQIAHP
Ga0209067_108253521	3300027898	Watersheds	MDPSGIAHIALELCDLLQLQLDSIMGRKLTEFTPDELNTYQKRKSRIAELRSELHRFANP
Ga0209415_100329524	3300027905	Peatlands Soil	MDPSGITAIALELCDLLQLQLDSIMGRKLTEFTPDELDAYQKRKSRIADLRSELHRLANP
Ga0209415_101864171	3300027905	Peatlands Soil	MDPNGIAQIAFELCDLLQLQLDSTMGRKLTDFTPDELDAYQKRKSRIAE
Ga0209698_101643762	3300027911	Watersheds	MAQMAQIAHEVCDLLQLQLDSIMGRKLTDFTPEEVNAYKKRKARIAELRFRLHQLADAA
Ga0209698_102554172	3300027911	Watersheds	MDPSGIAQIALEVCDLLQLQLDSIVGRKFTDFTPAEVNAYEKRKSRIAELRSELHHLANAAPRTATRGLKLTSDCHAER
Ga0209698_104816672	3300027911	Watersheds	MDPSGITAIALELCDLLQLQLDSIMGRKLTEFTPQELDAYRKRKSRIAELRSELHRLANP
Ga0209698_106821262	3300027911	Watersheds	MDPTGIAHIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELRSELHRFANP
Ga0302144_100700542	3300028560	Bog	MNSKDVAQIAVEVCDLLQMQLDSIISRSLSDFTPEELGAYQKRKSRIEELRSELHRLANP
Ga0302200_100169961	3300028909	Bog	MNSKDVAQIAVEVCDLLQMQLDSIISRSLSDFTPEELGAYQKRKSRIEELRSELH
Ga0247271_1224633	3300029903	Soil	IAQIALELCDLLQLQLDSIMGRKLTDFTPDELEAYQKRKSRIAEWQSELHRLANPT
Ga0302142_10828831	3300029920	Bog	MNSKDVAQIAVEVCDLLQMQLDSIISRSLSDFTPEELGAYQKRKSRIEELRSELHRLA
Ga0302280_10560954	3300029985	Fen	QIAVEVCDLLQMQLDSIISRSLSDFTPEELGAYQKRKSRIEELRSELHRLANPI
Ga0302283_12670632	3300029994	Fen	MNSKDVAQIAVEVCDLLQMQLDSIISRSLSDFTPEELGAYQKRKSRIEELRSELHRLANPIY
Ga0310037_100829452	3300030494	Peatlands Soil	MDPSGIAQIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAEVRSELH
Ga0310038_100207924	3300030707	Peatlands Soil	MDPSGIAQIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAEVRSEL
Ga0310038_101701532	3300030707	Peatlands Soil	MDPNGIAQIAFELCDLLQLQLDSTMGRKLTDFTPDELDAYQKRKSRIAEVRSELHRIANPTE
Ga0265340_100314483	3300031247	Rhizosphere	MDPSGIAQIALEVCDLLQLQLGSIMGRELTDFTSEELAAYEKRKSRIAELRAELHRLAHL
Ga0265339_100236993	3300031249	Rhizosphere	MDPSGIAQIALEVCDLLQLQLGSIMGRELTDFTSEELAAYEKRKSRIAELRAELHRLANP
Ga0265314_100416937	3300031711	Rhizosphere	MDPSGIAQIALEVCDLLQLQLDSIMGRELTDFTSEELAAYEKRKCRIAELRAELHRLAHL
Ga0307474_111350672	3300031718	Hardwood Forest Soil	MDTRGIAQVALEICDLMQEQLDSIIDRKLSDLTADELNAYQERKSRIAELRSELH
Ga0326727_105415151	3300033405	Peat Soil	MDPSEIAPIALELCDLLQLQLDSIMGRKLTDFTPDELDAYQKRKSRIAELRSELHRLANP
Ga0334837_065460_105_290	3300033823	Soil	MDPSGIAQIALELCDLLQLQLDSIMGRKLTDFTPDALDAYQKRKSRIAELRSELHRLANP
Ga0334847_005921_11_196	3300033826	Soil	MDPSGIAQLALELCDLLQLQLDSIMGCKLADFTPNELDAYQKRKSRIEELRFELRRLAHP
Ga0370483_0003680_1283_1468	3300034124	Untreated Peat Soil	MDANEIAAIALELCDLLQLQLESLMGRRLTEFTPDELDAYQKRKALIEELRSELHRRANP
Ga0370492_0105923_569_754	3300034282	Untreated Peat Soil	MDPGSFDAIALELCDLLQLQLDSIMGRRLTDLTPDELDAYRKRKAHIAELRSELHRFSKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068907

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences