NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F068949

Metagenome / Metatranscriptome Family F068949

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068949
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 72 residues
Representative Sequence MPAVDARSEPESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDSATDVVVPHKDA
Number of Associated Samples 83
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.05 %
% of genes near scaffold ends (potentially truncated) 29.84 %
% of genes from short scaffolds (< 2000 bps) 81.45 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (62.097 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(17.742 % of family members)
Environment Ontology (ENVO) Unclassified
(61.290 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(75.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.90%    β-sheet: 0.00%    Coil/Unstructured: 45.10%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF00580UvrD-helicase 18.55
PF00211Guanylate_cyc 9.68
PF13396PLDc_N 5.65
PF13361UvrD_C 4.03
PF07995GSDH 1.61
PF07589PEP-CTERM 1.61
PF08240ADH_N 1.61
PF00478IMPDH 0.81
PF13561adh_short_C2 0.81
PF02852Pyr_redox_dim 0.81
PF13604AAA_30 0.81
PF03971IDH 0.81
PF02743dCache_1 0.81
PF01061ABC2_membrane 0.81
PF01649Ribosomal_S20p 0.81
PF02738MoCoBD_1 0.81
PF13245AAA_19 0.81
PF01411tRNA-synt_2c 0.81
PF03358FMN_red 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0210Superfamily I DNA or RNA helicaseReplication, recombination and repair [L] 18.55
COG10743’-5’ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)Replication, recombination and repair [L] 18.55
COG3973DNA helicase IVReplication, recombination and repair [L] 18.55
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 9.68
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 1.61
COG0013Alanyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.81
COG0268Ribosomal protein S20Translation, ribosomal structure and biogenesis [J] 0.81
COG2838Monomeric isocitrate dehydrogenaseEnergy production and conversion [C] 0.81
COG2972Sensor histidine kinase YesMSignal transduction mechanisms [T] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.10 %
UnclassifiedrootN/A37.90 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004266|Ga0055457_10120608All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium722Open in IMG/M
3300004643|Ga0062591_101740373Not Available633Open in IMG/M
3300005162|Ga0066814_10076533All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.594Open in IMG/M
3300005328|Ga0070676_10148086All Organisms → cellular organisms → Bacteria → Proteobacteria1500Open in IMG/M
3300005328|Ga0070676_10200935All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia aquatica1306Open in IMG/M
3300005330|Ga0070690_100336951All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1091Open in IMG/M
3300005331|Ga0070670_100012788All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales7181Open in IMG/M
3300005331|Ga0070670_100038513All Organisms → cellular organisms → Bacteria → Proteobacteria4111Open in IMG/M
3300005331|Ga0070670_101960921Not Available539Open in IMG/M
3300005333|Ga0070677_10050085All Organisms → cellular organisms → Bacteria → Proteobacteria1685Open in IMG/M
3300005347|Ga0070668_100097589All Organisms → cellular organisms → Bacteria2324Open in IMG/M
3300005347|Ga0070668_101896281Not Available549Open in IMG/M
3300005347|Ga0070668_102137605Not Available517Open in IMG/M
3300005347|Ga0070668_102162439Not Available514Open in IMG/M
3300005353|Ga0070669_100197866All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1580Open in IMG/M
3300005355|Ga0070671_100228160All Organisms → cellular organisms → Bacteria → Proteobacteria1580Open in IMG/M
3300005365|Ga0070688_101421020Not Available563Open in IMG/M
3300005367|Ga0070667_100387033All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia aquatica1271Open in IMG/M
3300005367|Ga0070667_101071613All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300005441|Ga0070700_100516954All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300005441|Ga0070700_101599594Not Available557Open in IMG/M
3300005456|Ga0070678_102045700Not Available542Open in IMG/M
3300005457|Ga0070662_101447570Not Available592Open in IMG/M
3300005457|Ga0070662_101804083All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.528Open in IMG/M
3300005459|Ga0068867_100541607Not Available1007Open in IMG/M
3300005539|Ga0068853_101363032All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium686Open in IMG/M
3300005543|Ga0070672_100062667All Organisms → cellular organisms → Bacteria → Proteobacteria2935Open in IMG/M
3300005548|Ga0070665_100145002All Organisms → cellular organisms → Bacteria → Proteobacteria2378Open in IMG/M
3300005577|Ga0068857_101042673All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria788Open in IMG/M
3300005617|Ga0068859_102772648Not Available538Open in IMG/M
3300005617|Ga0068859_102827608Not Available532Open in IMG/M
3300005618|Ga0068864_100762473All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium949Open in IMG/M
3300005618|Ga0068864_101197146Not Available758Open in IMG/M
3300005718|Ga0068866_11018167All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.589Open in IMG/M
3300005843|Ga0068860_100005019All Organisms → cellular organisms → Bacteria → Proteobacteria13473Open in IMG/M
3300005843|Ga0068860_102827754Not Available503Open in IMG/M
3300006237|Ga0097621_101811782Not Available582Open in IMG/M
3300006572|Ga0074051_11341768Not Available533Open in IMG/M
3300006844|Ga0075428_100200090All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae2160Open in IMG/M
3300006969|Ga0075419_10768260Not Available688Open in IMG/M
3300009137|Ga0066709_102917064Not Available630Open in IMG/M
3300009148|Ga0105243_12149093All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300009176|Ga0105242_10994444All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium846Open in IMG/M
3300009177|Ga0105248_11929689All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.670Open in IMG/M
3300009553|Ga0105249_10283788Not Available1655Open in IMG/M
3300010400|Ga0134122_10105112All Organisms → cellular organisms → Bacteria2241Open in IMG/M
3300010400|Ga0134122_10562977Not Available1045Open in IMG/M
3300010400|Ga0134122_12706659All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.548Open in IMG/M
3300010401|Ga0134121_10678637All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300010401|Ga0134121_11388402All Organisms → cellular organisms → Bacteria → Proteobacteria712Open in IMG/M
3300010403|Ga0134123_10474029All Organisms → cellular organisms → Bacteria → Proteobacteria1170Open in IMG/M
3300011422|Ga0137425_1179108Not Available530Open in IMG/M
3300012951|Ga0164300_10198136All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium981Open in IMG/M
3300013296|Ga0157374_11039263Not Available839Open in IMG/M
3300013297|Ga0157378_11443219All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.732Open in IMG/M
3300013297|Ga0157378_11522442All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium714Open in IMG/M
3300013306|Ga0163162_10714140Not Available1123Open in IMG/M
3300013306|Ga0163162_12159498All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.639Open in IMG/M
3300013306|Ga0163162_13322251Not Available515Open in IMG/M
3300013308|Ga0157375_11609033All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.768Open in IMG/M
3300013308|Ga0157375_12127179All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.668Open in IMG/M
3300014304|Ga0075340_1096727Not Available588Open in IMG/M
3300014324|Ga0075352_1267624Not Available533Open in IMG/M
3300014325|Ga0163163_10022751All Organisms → cellular organisms → Bacteria → Proteobacteria5939Open in IMG/M
3300014969|Ga0157376_12115001Not Available601Open in IMG/M
3300014969|Ga0157376_13057597Not Available507Open in IMG/M
3300015201|Ga0173478_10048112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1382Open in IMG/M
3300015371|Ga0132258_10361808All Organisms → cellular organisms → Bacteria → Proteobacteria3592Open in IMG/M
3300015371|Ga0132258_10383226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3488Open in IMG/M
3300015371|Ga0132258_10753577All Organisms → cellular organisms → Bacteria → Proteobacteria2453Open in IMG/M
3300015371|Ga0132258_10822704All Organisms → cellular organisms → Bacteria2342Open in IMG/M
3300015371|Ga0132258_11700084All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.1592Open in IMG/M
3300015371|Ga0132258_13405766All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1092Open in IMG/M
3300015372|Ga0132256_100601589All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1214Open in IMG/M
3300015372|Ga0132256_102580363Not Available609Open in IMG/M
3300015373|Ga0132257_100655512All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1301Open in IMG/M
3300015373|Ga0132257_100854484All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia aquatica1138Open in IMG/M
3300015374|Ga0132255_101828018All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium923Open in IMG/M
3300015374|Ga0132255_103029179Not Available717Open in IMG/M
3300015374|Ga0132255_105760040Not Available524Open in IMG/M
3300018073|Ga0184624_10181670All Organisms → cellular organisms → Bacteria → Proteobacteria934Open in IMG/M
3300018476|Ga0190274_10030953All Organisms → cellular organisms → Bacteria3652Open in IMG/M
3300018476|Ga0190274_10974711All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium920Open in IMG/M
3300018476|Ga0190274_12749675Not Available589Open in IMG/M
3300021082|Ga0210380_10274551All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria766Open in IMG/M
3300021082|Ga0210380_10431151Not Available604Open in IMG/M
3300021082|Ga0210380_10547433Not Available531Open in IMG/M
3300025315|Ga0207697_10015094All Organisms → cellular organisms → Bacteria → Proteobacteria3195Open in IMG/M
3300025551|Ga0210131_1102700Not Available500Open in IMG/M
3300025893|Ga0207682_10219558All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium879Open in IMG/M
3300025893|Ga0207682_10272156Not Available791Open in IMG/M
3300025908|Ga0207643_10139430All Organisms → cellular organisms → Bacteria → Proteobacteria1447Open in IMG/M
3300025908|Ga0207643_10355795All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium920Open in IMG/M
3300025923|Ga0207681_10347458Not Available1187Open in IMG/M
3300025925|Ga0207650_10118478All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium2058Open in IMG/M
3300025925|Ga0207650_11544257Not Available564Open in IMG/M
3300025926|Ga0207659_10118449All Organisms → cellular organisms → Bacteria → Proteobacteria2025Open in IMG/M
3300025931|Ga0207644_10019976All Organisms → cellular organisms → Bacteria → Proteobacteria4550Open in IMG/M
3300025931|Ga0207644_10627053All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300025936|Ga0207670_10361742All Organisms → cellular organisms → Bacteria → Proteobacteria1151Open in IMG/M
3300025936|Ga0207670_11935197Not Available501Open in IMG/M
3300025940|Ga0207691_10302228Not Available1375Open in IMG/M
3300025945|Ga0207679_10346497All Organisms → cellular organisms → Bacteria → Proteobacteria1293Open in IMG/M
3300025960|Ga0207651_12012568All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.519Open in IMG/M
3300025960|Ga0207651_12026589Not Available517Open in IMG/M
3300025972|Ga0207668_10195104All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1608Open in IMG/M
3300025972|Ga0207668_10853758All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium808Open in IMG/M
3300025986|Ga0207658_10217298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1606Open in IMG/M
3300026041|Ga0207639_11891791Not Available558Open in IMG/M
3300026089|Ga0207648_10223030Not Available1676Open in IMG/M
3300026121|Ga0207683_10560824All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica1056Open in IMG/M
3300028380|Ga0268265_10140054All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2024Open in IMG/M
3300028381|Ga0268264_10030970All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Chitinivorax → Chitinivorax tropicus4386Open in IMG/M
3300031170|Ga0307498_10462508Not Available511Open in IMG/M
3300031720|Ga0307469_12282105Not Available528Open in IMG/M
3300031740|Ga0307468_100030231All Organisms → cellular organisms → Bacteria2569Open in IMG/M
3300032174|Ga0307470_11195843All Organisms → cellular organisms → Bacteria → Proteobacteria617Open in IMG/M
3300032180|Ga0307471_102832302All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300032205|Ga0307472_102400535All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.535Open in IMG/M
3300032829|Ga0335070_10093999All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3154Open in IMG/M
3300033004|Ga0335084_10303619All Organisms → cellular organisms → Bacteria → Proteobacteria1650Open in IMG/M
3300033433|Ga0326726_11875130Not Available584Open in IMG/M
3300034115|Ga0364945_0051856All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1147Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere17.74%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere8.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere7.26%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere6.45%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.84%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.84%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.03%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.03%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.23%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.42%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.42%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.61%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.61%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.61%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.61%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.81%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.81%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.81%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004266Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014304Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300014324Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025551Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0055457_1012060823300004266Natural And Restored WetlandsMPLMRARDTPESEVARLVRELEEAEAYEQSLRQTIIAVRDQLADGHTERALSMLNEALSTIDSATDVVVPHKDV*
Ga0062591_10174037323300004643SoilMAPSPASGGPDSEAARLLRELEAAEAYEQKLRQVIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHKDG*
Ga0066814_1007653313300005162SoilMPAVDARSEPESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0070676_1014808623300005328Miscanthus RhizosphereMAPTPASGAEDSESARLLHELEAAEAYEQKLRQVIISVKNELAAGHHERALSMLNEALNDIDSQTDVVVPQRDA*
Ga0070676_1020093523300005328Miscanthus RhizosphereMAPSPASGGPDSEAARLLRELEAAEAYEQKLRQIIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHKGA*
Ga0070690_10033695123300005330Switchgrass RhizosphereMAAMDPRRDPESEIARLLRELEEAEIYTQKLRQTIVSVRDALTQGHVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0070670_10001278823300005331Switchgrass RhizosphereMAPTPASGAEDSESARLLRELEAAEAYEQKLRQVIVSVKNELAAGHHERALSMLNEALNDIDSQTDVVVPHRDG*
Ga0070670_10003851333300005331Switchgrass RhizosphereMALTPASGAPESESARLLRELEAAEAYEQKLRQIIVSVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHPDR*
Ga0070670_10196092113300005331Switchgrass RhizosphereMPAKPEPRAAESEATRLLRELEAAEAYEQQLRQTIVAVRDQLAAGHTERALSMLNEALNYIDSATDVVVPHKGP*
Ga0070677_1005008523300005333Miscanthus RhizosphereMPAKPEPRAAESEATRLLRELEAAEAYEQQLRQTIVAVRDQLAAGHTERALSMLNEALNYIDSATDVVVPPKGP*
Ga0070677_1084066523300005333Miscanthus RhizosphereMATPASGAPDSETARLLRELEAAEAYEQKLRQIIVSVKNELASGHTERALSMLNEALNDI
Ga0070668_10009758933300005347Switchgrass RhizosphereDPELEVGRLIRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHKDR*
Ga0070668_10189628113300005347Switchgrass RhizosphereMALTPASGAPERESARLLRELEAAEAYEQKLRQIIVSVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHPDR*
Ga0070668_10213760513300005347Switchgrass RhizosphereMAAMDARSEPQSEVDRLLRELEAAELYEQQLRQTIVSVRDELAAGHAERALSMLNAALNDIDAATDVVV
Ga0070668_10216243913300005347Switchgrass RhizosphereAARCRKIKRSEKKKGPMPPTPPAGAPDNEAARLLRELEAAEAYEQKLRQVIVSVKNELAAGHTERALSMLNEALNDIDSATDVVVPHKDG*
Ga0070669_10019786623300005353Switchgrass RhizosphereHPMALTPASEALESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHRDR*
Ga0070671_10022816013300005355Switchgrass RhizosphereMTTMDARGDPESESARLLRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPH
Ga0070688_10142102023300005365Switchgrass RhizosphereMATPAAGAPDSEAARLLRELEAAEAYEQKLRQVIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHKDA*
Ga0070667_10038703323300005367Switchgrass RhizosphereMALTPASEALESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNE
Ga0070667_10107161323300005367Switchgrass RhizosphereMMNARGDPESESARLLRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0070700_10051695423300005441Corn, Switchgrass And Miscanthus RhizosphereMALTPASEALESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHRDR*
Ga0070700_10159959413300005441Corn, Switchgrass And Miscanthus RhizosphereAPPAGEGEVTRLVRELEAAEAYEQRLRQTIVAVRDQLAAGHAERALSMLNEALNYIDSATDFVVPHKDP*
Ga0070678_10204570023300005456Miscanthus RhizosphereSEALESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHRDR*
Ga0070662_10144757013300005457Corn RhizosphereMALTPASGAPESESARLLRELEAAEAYEQKLRQIIVSVKNELAAGHHERALSMLNEALNEIDSQTDVVVP
Ga0070662_10180408323300005457Corn RhizosphereEVGRLIRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHKDR*
Ga0068867_10054160723300005459Miscanthus RhizosphereMAAMDNRRDPESEVARLLRELEEAEIYTQKLRQTIVGVRDELTAGHVERALSMLNAALNDIDSAT
Ga0068853_10136303213300005539Corn RhizosphereESARLLRELEAAEAYEQKLREVIVSVKNELAAGHHERALSMLNEALNDIDSQTDVVVPQRDA*
Ga0070672_10006266723300005543Miscanthus RhizosphereMAAMDNRRDPESEVARLLRELEEAEIYTQKLRQTIVGVRDELTAGHVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0070665_10014500213300005548Switchgrass RhizosphereMATPAAGAPDSEAARLLRELEAAEAYEQKLRQVIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHKGA*
Ga0068857_10104267323300005577Corn RhizosphereMATPAAGAPDSEAARLLRELEAAEAYEQKLRQVIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHKDG*
Ga0068859_10277264813300005617Switchgrass RhizosphereEHPMALTPASEALESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHRDR*
Ga0068859_10282760813300005617Switchgrass RhizospherePEPRAAESEATRLLRELEAAEAYEQQLRQTIVAVRDQLAAGHTERALSMLNEALNYIDSATDVVVPHKGP*
Ga0068864_10076247323300005618Switchgrass RhizosphereMPAKPAPPAGEGEVTRLVRELEAAEAYEQRLRQTIVAVRDQLAAGHAERALSMLNEALNYIDSATDVVVPHKDP*
Ga0068864_10119714613300005618Switchgrass RhizosphereMALTPASGAPESESARLLRELEAAEAYEQKLRQIIVSVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHRDP*
Ga0068866_1101816713300005718Miscanthus RhizosphereMAAMDPRRDPESEIARLLRELEEAEIYTQKLRQTIVGVRDALTQGHVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0068860_10000501973300005843Switchgrass RhizosphereMALTPASESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHRDR*
Ga0068860_10282775423300005843Switchgrass RhizosphereMPAKPEPRAAESEATRLLRELEAAEAYEQQLRQTIVAVRDQLAAGHTERALSMLNEALNYID
Ga0097621_10181178213300006237Miscanthus RhizosphereMPAMDARSEPESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDAATDVVVPHRDA*
Ga0074051_1134176823300006572SoilVARLLRELESAELYEQQLRQTIVSVRDELAGGHVERALSMLNAALNDIDSATDVVVPHKKA*
Ga0075428_10020009023300006844Populus RhizosphereMPPTPPSGAPDTEAARLLRELEAAEAYEQKLRQVIVSVKNELAAGHTERALSMLNEALNDIDSATDVVVPHKDG*
Ga0075419_1076826023300006969Populus RhizosphereMPPTPPSGAPDTEAARLLRELEAAEAYEQKLRQVIVSVKNELAAGHTERALSMLNEALNDIDSATDVVVPHKDR*
Ga0066709_10291706423300009137Grasslands SoilMTANPTRGAAESEVTRLVRELEAAEAYEQRLRQTITAVRDQLAAGHSERALSMLNEALNYIDSATDVVVPHKDP*
Ga0105243_1214909323300009148Miscanthus RhizosphereMAAIDGRTDPEGEVGRLIRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVP
Ga0105242_1099444413300009176Miscanthus RhizosphereMDARSEPESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDSATDVVVPHRDA*
Ga0105248_1192968923300009177Switchgrass RhizosphereMAAMDNRRDPESEVARLLRELEEAEIYTQKLRQTIVGVRDELTAGHVERALSMLNAALNDIDSATDVVVPHKDV*
Ga0105249_1028378823300009553Switchgrass RhizosphereMAAMDNRRDPESEVARLLCELEEAEIYTQKLRQTIVGVRDELTAGHVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0134122_1010511233300010400Terrestrial SoilMDARSEPESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDAATDVVVPHKDA*
Ga0134122_1056297723300010400Terrestrial SoilMPAKDTRGVPESEEARLLRELEAAEAYEQRLRQVIVNVKEALAAGQTERAQSMLNEALNDIDSATDVVVPHKDG*
Ga0134122_1270665913300010400Terrestrial SoilMAAIDGRTDPELEVGRLIRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPRKDA*
Ga0134121_1067863723300010401Terrestrial SoilMPAMDARSEPESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDAATDVVVPHKDA*
Ga0134121_1138840213300010401Terrestrial SoilMPAKPEPRAAESEATRLLRELEAAEAYEQQLRQTIVAVRDQLAAGHTERALSMLNEALNHIDSATDVVVPHKG
Ga0134123_1047402913300010403Terrestrial SoilMAPSPASGAPDSEAARLLRELEAAEAYEQKLRQVIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHKDA*
Ga0137425_117910813300011422SoilMAPTPASGAADSEAARLLRELEAAEAYEQKLRQVIVSVKNELAGGHTERALSMLNEALNDIDAATDVVVPHKDG*
Ga0164300_1019813623300012951SoilMDARREPESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0157374_1103926323300013296Miscanthus RhizosphereMAPTPASGAEDSESARLLRELEAAEAYEQKLRQIIVSVKNELAAGHHERALSMLNEALNDIDSQTDVVVPHRDG*
Ga0157378_1144321913300013297Miscanthus RhizosphereMTAMDARREPESEVAHLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0157378_1152244223300013297Miscanthus RhizosphereFEKQEIPMAPTPVAGPQESESARLLRELEAAEAYEQKLRQVIVSVKNELAAGHQERALSMLNEALNDIDSQTDVVVPHRDR*
Ga0163162_1071414013300013306Switchgrass RhizosphereMALTPASEALESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHPDR*
Ga0163162_1215949823300013306Switchgrass RhizosphereMAKDTDMMDARSDPESEGARLLRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHRDA*
Ga0163162_1332225113300013306Switchgrass RhizosphereMPAKPEPRAAESEATRLLRELEAAEAYEQQLRQTIVAVRDQLAAGHTERALSMLNEALNYIDSATDVVVP
Ga0157375_1160903323300013308Miscanthus RhizosphereMDNRRDPESEVARLLRELEEAEIYTQKLRQTIVGVRDELTAGHVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0157375_1212717923300013308Miscanthus RhizosphereMTTMDAHGDPESESARLLRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0075340_109672713300014304Natural And Restored WetlandsMAMPTQRAPPTPESEVARLTRELEAAEAYEQYLRQTILVIKDQLAAGHAERALSMLNEALNTID
Ga0075352_126762423300014324Natural And Restored WetlandsMPKNDTREAPESEADRLLRELEAAEAYEQHLRQVIVDVRETLAAGRTERALSMLNEALNDIDAATDVVVPHKD*
Ga0163163_1002275133300014325Switchgrass RhizosphereMAPTPASDAEDSESARLLRELEAAEAYEQKLRQVIVSVKNELAAGHHERALSMLNEALNDIDSQTDVVVPHRDG*
Ga0157376_1211500113300014969Miscanthus RhizosphereESARLLRELEAAEAYEQKLRQVIVSVKNELAAGHHERALSMLNEALNDIDSQTDVVVPHRDG*
Ga0157376_1305759713300014969Miscanthus RhizosphereMDARSEPESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDSATDVVVPH
Ga0173478_1004811213300015201SoilSPMAAMDNRRDPESEVARLLRELEEAEIYTQKLRQTIVGVRDELTAGHVERALSMLNAALNDIDSATDVVVPHKDV*
Ga0132258_1036180833300015371Arabidopsis RhizosphereMPAKPAPRADESELSRLVRELEAAEAYEQKLRQTIVTVRDQLAAGHTERALSMLNEALNYIDSATDVVVPHQDP*
Ga0132258_1038322633300015371Arabidopsis RhizosphereMPAEPAPPAGEGEVARLVRELEAAEAYEQRLRQTIVAVRDQLAAGHAERALSMLNEALNYIDSATDVVVPHKDP*
Ga0132258_1075357723300015371Arabidopsis RhizosphereMAATDTRRDPESEVTRLLRELEEAEIYTQKLRQTIVGVRDELAAGHVERSLSMLNAALNDIDSATDVVVPHRDA*
Ga0132258_1082270413300015371Arabidopsis RhizosphereMDARSEPESEAARLLRELEAAELYEQQLRQTIVSVRDELAAGHTERALSMLNAALNDIDSATDVVVPHKHA*
Ga0132258_1170008423300015371Arabidopsis RhizosphereMAAKDARGEPESEVSRLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDSATDVVVPHKNA*
Ga0132258_1340576623300015371Arabidopsis RhizosphereMAPTPASGAEDSESARLLHELEAAEAYEQKLRQVIISVKNELAAGHHERALSMLNEALNDIDSQTDVVVPHRDG*
Ga0132256_10060158923300015372Arabidopsis RhizosphereMDARSEPESELARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNEALNHIDAATDVVVPHKDA*
Ga0132256_10258036323300015372Arabidopsis RhizosphereMAATDTRRDPESEVARLLRELEEAEIYTQKLRQTIVGVRDELAAGHVERSLSMLNAALNDIDSATDVVVPHRDA*
Ga0132257_10065551223300015373Arabidopsis RhizosphereMDARSEPESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDSATDVVVPHKDA*
Ga0132257_10085448413300015373Arabidopsis RhizosphereMPAKPAPPAGEGDVARLVRELEAAEAYEQRLRQTIVAVRDQLAAGHAERALSMLNEALTYIDSATDVVVPHKDP*
Ga0132255_10182801813300015374Arabidopsis RhizosphereRRMTSMDARSEPESEAARLLRELEAAELYEQQLRQTIVSVRDELAAGHTERALSMLNAALNDIDSATDVVVPHKHA*
Ga0132255_10302917913300015374Arabidopsis RhizosphereMAATDTRRDPDSEFTRLLRELEEAEIYTQKLRQTIVGVRDELAAGHVERSLSMLNAALNDIDSATDVVVPHRDA*
Ga0132255_10576004013300015374Arabidopsis RhizosphereMDARSEPESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDAATDVVVPHRDA*
Ga0184624_1018167023300018073Groundwater SedimentMAPSPASGGPDSEAARLLRELEAAEAYEQKLRQIIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHKGA
Ga0190274_1003095333300018476SoilMPAKPAPRAAESEVTRLIRELEAAEAYEQKLRQTIVTVRDQLAAGHTERALSMLNEALNYIDSATDVVVPHKDP
Ga0190274_1097471123300018476SoilMPPTPASKAPEGEAARLLRELEAAEAYEQKLRQVIVSVKEELAAGHTERALSMLNEALNDIDSATDVVVPHKHG
Ga0190274_1274967523300018476SoilMATPAAGAPDSEAARLLRELEAAEAYEQKLRQVIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHRDG
Ga0210380_1027455123300021082Groundwater SedimentRRMPKAPESEADRLLRELEAAEAYEQRLRQVIVGVRDQLAAGHTERALSMLNEALNDIDSATDVVVPHKDR
Ga0210380_1043115113300021082Groundwater SedimentMAPSPASGGPDSEAARLLRELEAAEAYEQKLRQIIVSVKNELSSGHTERALSMLNEALNDIDSA
Ga0210380_1054743323300021082Groundwater SedimentMADESELQLQEAEIARLVRELELAEAYEQKLRQLVVDVREQITAGHTQQALSMLNAALNDIDSQTDVVVPHERR
Ga0207697_1001509423300025315Corn, Switchgrass And Miscanthus RhizosphereMALTPASEALESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHRDR
Ga0210131_110270013300025551Natural And Restored WetlandsMTAMRGPPVPESEGARLVRELEAAEAYEQHLRQVIVGVRDQLAAGHVERALSMLNEALNYIDSATDVVVPHADT
Ga0207682_1021955813300025893Miscanthus RhizosphereMAAIDGRTDPELEVGRLIRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHKDR
Ga0207682_1027215613300025893Miscanthus RhizosphereMPAKPEPRAAESEATRLLRELEAAEAYEQQLRQTIVAVRDQLAAGHTERALSMLNEALNYIDSATDVVVPPKGP
Ga0207643_1013943023300025908Miscanthus RhizosphereMAAMDNRRDPESEVARLLRELEEAEIYTQKLRQTIVGVRDELTAGHVERALSMLNAALNDIDSATDVVVPHKDA
Ga0207643_1035579523300025908Miscanthus RhizosphereLTPASEALESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHRDR
Ga0207681_1034745823300025923Switchgrass RhizosphereMATPAAGAPDSEAARLLRELEAAEAYEQKLRQIIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHKGA
Ga0207650_1011847823300025925Switchgrass RhizosphereMAPTPASGAEDSESARLLRELEAAEAYEQKLRQVIVSVKNELAAGHHERALSMLNEALNDIDSQTDVVVPHRDG
Ga0207650_1154425723300025925Switchgrass RhizosphereMPAKPEPRAAESEATRLLRELEAAEAYEQQLRQTIVAVRDQLAAGHTERALSMLNEALNYIDSATDVVVPHKGP
Ga0207659_1011844923300025926Miscanthus RhizosphereMAAMDNRRDPESEVARLLRELEEAEIYTQKLRQTIVGVRDELTAGHVERALSMLNAALNDIDSATDVVVPHKDV
Ga0207644_1001997623300025931Switchgrass RhizosphereMALTPASGAPESESARLLRELEAAEAYEQKLRQIIVSVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHPDR
Ga0207644_1062705343300025931Switchgrass RhizosphereMTTMDARGDPESESARLLRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHKDA
Ga0207670_1036174213300025936Switchgrass RhizosphereDPESEIARLLRELEEAEIYTQKLRQTIVSVRDALTQGHVERALSMLNAALNDIDSATDVVVPHKDA
Ga0207670_1193519723300025936Switchgrass RhizosphereMATPAAGAPDSEAARLLRELEAAEAYEQKLRQVIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHKDG
Ga0207691_1030222823300025940Miscanthus RhizosphereMAPSPASGGPDSEAARLLRELEAAEAYEQKLRQVIVSVKNELASGHTERALSMLNEALNDIDSATDVVVPHKGA
Ga0207679_1034649723300025945Corn RhizosphereMALTPASGAPESESARLLRELEAAEAYEQKLRQVIVSVKNELAAGHHERALSMLNEALNDIDSQTDVVVPHRDG
Ga0207651_1201256813300025960Switchgrass RhizosphereMTTMDARGDPESESARLLRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHRDA
Ga0207651_1202658923300025960Switchgrass RhizosphereESARLLRELEAAEAYEQKLRQIIVSVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHPDR
Ga0207668_1019510413300025972Switchgrass RhizosphereGRTDPELEVGRLIRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHKDR
Ga0207668_1085375813300025972Switchgrass RhizosphereCRKIKRSEKKKGPMPPTPPAGAPDNEAARLLRELEAAEAYEQKLRQVIVSVKNELAAGHTERALSMLNEALNDIDSATDVVVPHKDG
Ga0207658_1021729813300025986Switchgrass RhizosphereSHVMTTMDARGDPESESARLLRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHKGA
Ga0207639_1189179123300026041Corn RhizosphereMALTPASEALESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHRD
Ga0207648_1022303033300026089Miscanthus RhizosphereMTAMDARREPESEVAHLLRELEAAELYEQQLRQTIVSVRDELAAGRVERALSMLNAALNDIDSATDVVVPHKDR
Ga0207683_1056082423300026121Miscanthus RhizosphereMAPTPAAGPQESESARLLRELEAAEAYEQKLRQVIVTVKNELAAGHHERALSMLNEALNDIDSQTDVVVPHRDR
Ga0268265_1014005423300028380Switchgrass RhizosphereMAAMDPRRDPESEIARLLRELEEAEIYTQKLRQTIVSVRDALTQGHVERALSMLNAALNDIDSATDVVVPHKDA
Ga0268264_1003097023300028381Switchgrass RhizosphereMALTPASESESARLLRELEAAEVYEQKLRQVIVTVKNELAAGHHERALSMLNEALNEIDSQTDVVVPHRDR
Ga0307498_1046250813300031170SoilDRGEIARLCKELEEAELYEQRLRGLVVAVRDELAAGNVARALSMCNEMLNEIDSATDVVVPERDASAAAVPKVR
Ga0307469_1228210523300031720Hardwood Forest SoilMTADERLQAAESENARLVAELEEAELYEQKLRQLIVEVRDELAAGRIEQALSMLNTALNDIDSATDVVVPPHRTK
Ga0307468_10003023123300031740Hardwood Forest SoilMATKDMRREPESEVARLLRELESAEIYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDSATDVVVPHKDA
Ga0307470_1119584313300032174Hardwood Forest SoilMAAMDTRRDPESEVTRLLRELEEAEIYTQKLRQTIVGVRDQLAAGHVERALSMLNAALNDIDSATDVVVPHKDA
Ga0307471_10283230223300032180Hardwood Forest SoilMAATNTRDEPDSEVARLIRELEAAELYEQQLRQTIVNVREELSAGHVERALSMLNAALNEIDAATDVVVPHKGA
Ga0307472_10240053523300032205Hardwood Forest SoilESEVARLLRELEAAELYEQQLRQTIVSVRDELAAGHVERALSMLNAALNDIDSATDVVVPHKDA
Ga0335070_1009399913300032829SoilMTAQPSDADAEIARLVRELEDAEAYEQKLRQTIVEVRDRLAAGNTAQALSLLNQALNDIDSATDVVAARRTSA
Ga0335084_1030361923300033004SoilMPANDTREAPESEAARLLRELEAAEAYEQHLRQVIVDVREALAAGRAERALSMLNEALNDIDAATDVVVPQKDR
Ga0326726_1187513013300033433Peat SoilMTAMRAPPVPESEAARLVRELEAAEAYEQNLRQVIVGVRDQLAAGHAERALSMLNEALNYIDSATDVVVPHANK
Ga0364945_0051856_398_6223300034115SedimentMPAKPARRATESEVTRLIRELEAAEAYEQKLRQTIVTVRDQLAAGHTERALSMLNEALNYIDSATDVVVPHKDP

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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