Metagenome Family F068975

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068975
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	39 residues
Representative Sequence	ISKSFRKYVSNIPGNHEVKELQKTAILGTAHILRKVLT
Number of Associated Samples	28
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	2.42 %
% of genes from short scaffolds (< 2000 bps)	1.61 %
Associated GOLD sequencing projects	23
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (98.387 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.48% β-sheet: 0.00% Coil/Unstructured: 51.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00060	Lig_chan	0.81
PF03372	Exo_endo_phos	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0834	ABC-type amino acid transport/signal transduction system, periplasmic component/domain	Signal transduction mechanisms [T]	1.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
All Organisms	root	All Organisms	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
cellular organisms	root	All Organisms → cellular organisms	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Paraneoptera	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Hemiptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Auchenorrhyncha	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Auchenorrhyncha	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Cicadomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Auchenorrhyncha → Cicadomorpha	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Membracoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Auchenorrhyncha → Cicadomorpha → Membracoidea	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Cicadellidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Auchenorrhyncha → Cicadomorpha → Membracoidea → Cicadellidae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Cicadellinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Auchenorrhyncha → Cicadomorpha → Membracoidea → Cicadellidae → Cicadellinae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Proconiini	tribe	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Auchenorrhyncha → Cicadomorpha → Membracoidea → Cicadellidae → Cicadellinae → Proconiini	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Cuerna	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Auchenorrhyncha → Cicadomorpha → Membracoidea → Cicadellidae → Cicadellinae → Proconiini → Cuerna	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Cuerna arida	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Auchenorrhyncha → Cicadomorpha → Membracoidea → Cicadellidae → Cicadellinae → Proconiini → Cuerna → Cuerna arida	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002238\|JGI20169J29049_11263181	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1302	Open in IMG/M
3300002509\|JGI24699J35502_10639464	Not Available	712	Open in IMG/M
3300010882\|Ga0123354_10044582	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Auchenorrhyncha → Cicadomorpha → Membracoidea → Cicadellidae → Cicadellinae → Proconiini → Cuerna → Cuerna arida	6799	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	100.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001343	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5	Host-Associated	Open in IMG/M
3300001542	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C	Host-Associated	Open in IMG/M
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002175	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5	Host-Associated	Open in IMG/M
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002238	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1	Host-Associated	Open in IMG/M
3300002308	Nasutitermes corniger P4 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P4	Host-Associated	Open in IMG/M
3300002501	Neocapritermes taracua P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P1	Host-Associated	Open in IMG/M
3300002504	Neocapritermes taracua P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P4	Host-Associated	Open in IMG/M
3300002507	Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P1	Host-Associated	Open in IMG/M
3300002508	Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P1	Host-Associated	Open in IMG/M
3300002509	Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P4	Host-Associated	Open in IMG/M
3300006045	Neocapritermes taracua P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P3	Host-Associated	Open in IMG/M
3300006226	Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3	Host-Associated	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010167	Labiotermes labralis P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P3	Host-Associated	Open in IMG/M
3300010369	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 3)	Host-Associated	Open in IMG/M
3300010882	Labiotermes labralis P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P4	Host-Associated	Open in IMG/M
3300027539	Nasutitermes corniger midgut segment microbial community from laboratory colony in Florida, USA - Nc150M (SPAdes)	Host-Associated	Open in IMG/M
3300027670	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C (SPAdes)	Host-Associated	Open in IMG/M
3300027864	Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1 (SPAdes)	Host-Associated	Open in IMG/M
3300027891	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)	Host-Associated	Open in IMG/M
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated	Open in IMG/M
3300027966	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5 (SPAdes)	Host-Associated	Open in IMG/M
3300028325	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20172J14457_100651552	3300001343	Termite Gut	FRKYVSNIPGNHEVKELQKTAILGTAHILQKVLT*
JGI20167J15610_100451101	3300001542	Termite Gut	ISKSFRKYVSNIPGNHEVKELQKTAILGTAHILRKVLT*
JGI20163J15578_105092661	3300001544	Termite Gut	KSFRKYVSNIPGNHDVKELQKTAILGTAHILREVLT*
JGI20166J26741_101492771	3300002175	Termite Gut	SFRKYVSDIPGNHDVKELQKTAILGTAHILRKVPT*
JGI20166J26741_104640711	3300002175	Termite Gut	KSFRKYVSDIPGNHDIKELQKTAILGTAHILQKVLT*
JGI20166J26741_107045051	3300002175	Termite Gut	ISKSFRKYVSDIPGNHDIKELQKTAILGTAHTLREVLT*
JGI20166J26741_114554874	3300002175	Termite Gut	MEKLKKSLKKYLNCIPGNHDIKELHKTAILGTAHKLRKVLI*
JGI20163J26743_111530271	3300002185	Termite Gut	TISKSFRKYVSDIPGNHDVKELQKTAILGTAHIHRKVLT*
JGI20169J29049_105113121	3300002238	Termite Gut	KSFRKYVSNIPGNHEVKELQKTAILGTAHILREVLM*
JGI20169J29049_105152781	3300002238	Termite Gut	KSFRKYVSNIPGNHEVKELQKTAILGTAHILRTVLT*
JGI20169J29049_105393841	3300002238	Termite Gut	GTISKSFRKYVSNIPGNHEVKELQKTAILGTTHILQKVLT*
JGI20169J29049_105849281	3300002238	Termite Gut	FRKYVSNIPGNHEVKELQKTAILGTAHILRKVPT*
JGI20169J29049_106031801	3300002238	Termite Gut	ISKSFRKYVSNIPGNHKVKELQKTATLGIAYILRKVLT*
JGI20169J29049_106903501	3300002238	Termite Gut	ISKSFRKYVSTIPGNHEVKELQKTAILGTAHIVRKVLT*
JGI20169J29049_107811341	3300002238	Termite Gut	TISKSFRKYVSNIPGNHEVKELQKTAKLGTAHILRKVLT*
JGI20169J29049_107919191	3300002238	Termite Gut	SKSFRKCVSNIPGNHEVKELQKTAILGTAHILQKVLT*
JGI20169J29049_108682102	3300002238	Termite Gut	TISKSFRKYVSNKPGNHEVKELQKTAILGTAHIRRKVLT*
JGI20169J29049_109670952	3300002238	Termite Gut	RTISMSFRKYVSNIPGNHEVKELQKTAILGTAHILRKVLT*
JGI20169J29049_110073761	3300002238	Termite Gut	IGATGTISKSFRKYVSNIPGNHEIKELQKTAILGTAHIPRKVLS*
JGI20169J29049_110510003	3300002238	Termite Gut	SFRKYVSNIPGNHEVKELQKAAILGTAHIPRKVLT*
JGI20169J29049_111495391	3300002238	Termite Gut	TISKSFRKYVSNIPGNHEVKELQKTAILGTAHLLRKVLT*
JGI20169J29049_111648804	3300002238	Termite Gut	SFRKYVSNIPGNHEVKELQQTAILGTAHILQKVLM*
JGI20169J29049_111904431	3300002238	Termite Gut	ISKSFRKYVSNIPGNHEVKELQKTAILGTAHIQREVLT*
JGI20169J29049_112259901	3300002238	Termite Gut	SKSFRKYVSNIPGNHEVKELQKTAILGTAHLLRKVLT*
JGI20169J29049_112631815	3300002238	Termite Gut	KSFRKYVSNIPGSHEVKELQKTAILGTAHILRKVLT*
JGI20169J29049_112720661	3300002238	Termite Gut	ISKSFRKYVSNIPGNHEVKELQKTAILGTAHIVQKVLT*
JGI20169J29049_113388765	3300002238	Termite Gut	MSFRNYVSNIPGNHKVKELQKTAILGTAHILRKVLT*
JGI20169J29049_113717551	3300002238	Termite Gut	SFRKYVSNIPGNHEVKELQQTAILGTAHILQNVLM*
JGI20169J29049_114270601	3300002238	Termite Gut	IGATGTISKSFRKYVSNIPGNHEVKELQKTAILGTAHIVRKVLT*
JGI20169J29049_114348899	3300002238	Termite Gut	SKSFRKYVSNIPGNHKVKELQKTAILGTAHILQKVLT*
JGI20169J29049_114365835	3300002238	Termite Gut	MPFRKDASNIPENHEVKELQKTAILGTAHILRKVLT*
JGI20171J29575_117321301	3300002308	Termite Gut	TGTISKSFRKYVSNIPGNHEVKELQKTAILGTAHIVRKVLT*
JGI20171J29575_121933393	3300002308	Termite Gut	TGTISKSFREYVSNIPGNHEVKELQKTAILGTAHIPRKVLT*
JGI24703J35330_107238291	3300002501	Termite Gut	IGATGTISKSFRKYISNIPGNHEVKELQKTAILGTAHILQKVLM*
JGI24703J35330_108347183	3300002501	Termite Gut	SFRKYIRNIPGNHEVKELQKTAILGTAHILRKVPTQELAI*
JGI24703J35330_110650061	3300002501	Termite Gut	ISKLFRKYISNIPGNHEVKELQKTAILGTAHIRVLRKVLT*
JGI24703J35330_111890251	3300002501	Termite Gut	GTISKSFRKYISNIPGNHEVKELQKTALLGTAHILQKVLT*
JGI24703J35330_112580641	3300002501	Termite Gut	VTGTISKSFIKYISNIPGNHEVKELQKTAILGTAHILQKVLT*
JGI24703J35330_113273701	3300002501	Termite Gut	TISKSFRKYISNIPGNHEVKELQKTAILGTAHTLQKVLT*
JGI24703J35330_114032742	3300002501	Termite Gut	TGTISKSFTKYISNIPGNDEVKELQKTAILGTAHILRKVLM*
JGI24703J35330_115385081	3300002501	Termite Gut	GTISKSFRKYISNIPGNHKVKELQKTAILGTAHILRKVLT*
JGI24703J35330_117395287	3300002501	Termite Gut	VIIGVTGTISKSFRKYISNIPGNHEVKELQKTAILGTAHILQKLQ*
JGI24705J35276_121623261	3300002504	Termite Gut	TGTISKSFRKYISNIPGNHEVKELQKTAILGTAHILQKVLM*
JGI24697J35500_107340413	3300002507	Termite Gut	TISKTFRKHVSNIPGNHEVKELQKTAILGTAHIHRKVLM*
JGI24697J35500_111993502	3300002507	Termite Gut	TISKTFRKYVNNIPGNHEVKELQKTAILGTAHIIQKVLM*
JGI24700J35501_106560403	3300002508	Termite Gut	TGTISKSFRKHVSNIPGHHDVKELQKTAILGTAHILREVLT*
JGI24700J35501_107682541	3300002508	Termite Gut	GTISKSFRKYVSDIPGNHDVKELQKTAILGTADIRVLRKVLT*
JGI24699J35502_106088371	3300002509	Termite Gut	TGTISKSFRKYVSNIPRNHEVKELQKTAILGTAHILREVLI*
JGI24699J35502_106394641	3300002509	Termite Gut	ATGTISKTFRKYVSNISGNHEVKELQKTAILGTAHILRKVLM*
JGI24699J35502_107619311	3300002509	Termite Gut	NNNTISKSFRKYVSNISANHEVKELQKTAILGTAHILQKVLM*
JGI24699J35502_109055231	3300002509	Termite Gut	TGTISKLFRKYLSNIPGNHEVKELQKTAILGTAHILRKVLM*
Ga0082212_101257311	3300006045	Termite Gut	LRKYISNIPGNHEVKELQKTAILGTAHILRKVLT*
Ga0082212_102298941	3300006045	Termite Gut	TGTISKLFRKYISNIPGNHEVKELQKTAILGTAHIRVLRKVLT*
Ga0082212_105482301	3300006045	Termite Gut	SKSFRKYISNIPGNHEVKELQKTAILGTAHILRKVLM*
Ga0082212_105857661	3300006045	Termite Gut	LKIIKKIRNIPGNHEVKELQKTAILGTAHMLRKVPT*
Ga0099364_112393812	3300006226	Termite Gut	SFIKYVSDIPGNHDVKEQQKTAILGTAHILREVLT*
Ga0123357_100661561	3300009784	Termite Gut	SFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLT*
Ga0123357_101470941	3300009784	Termite Gut	SFRKYVSNIPGKHEVKELQKTAILGTAHILREVLT*
Ga0123357_103951121	3300009784	Termite Gut	ATGTISKSFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLT*
Ga0123357_104338971	3300009784	Termite Gut	NSFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLT*
Ga0123355_100523874	3300009826	Termite Gut	SKSFRKYMSNIPGKHEVKELQKTAILGTAHIHWKVLM*
Ga0123355_102018451	3300009826	Termite Gut	IIGATGTISKSFRKYVSNIPGKHEVKELQKTAILGTAHILREVLT*
Ga0123355_107794782	3300009826	Termite Gut	VTGTISNSFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLM*
Ga0123355_107842971	3300009826	Termite Gut	TISKSFRKYVSNIPGNHEVKELQKTAILGTAHILRKVLM*
Ga0123355_111696261	3300009826	Termite Gut	TVSKSFRKYVSNIPGKHEVKVLQKTAILGTAHILRKVLM*
Ga0123356_128936101	3300010049	Termite Gut	SFRNYVSNIPGKHVVKELQKTAILGTAHILRKVLM*
Ga0131853_101109555	3300010162	Termite Gut	GSISKSFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLM*
Ga0131853_101485644	3300010162	Termite Gut	TISKSFRKYVSKIPGKHEVKELQKTAILGTAHILRKVLM*
Ga0131853_101695421	3300010162	Termite Gut	TGTVSDSFRKYVSNIPGKHDVKELQKTAILSTAHILRKVPT*
Ga0131853_109019691	3300010162	Termite Gut	TISKPFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLM*
Ga0131853_113014871	3300010162	Termite Gut	ATGTISKSFRKYVSNIPGKHEVKELQKTAILGTAHILQKVLM*
Ga0123353_104081931	3300010167	Termite Gut	TISKSFRKYASNIPGKHEVKELQKTAILGTAHILRKVLM*
Ga0123353_106035151	3300010167	Termite Gut	TVSRPFRKYMSSIPGKHEVKELQKTAILGTAHILREVLM*
Ga0123353_106200222	3300010167	Termite Gut	ISKSFRKYVSNIPGKHEVKELQKTAILGTAHILREVLM*
Ga0123353_110000101	3300010167	Termite Gut	YVSNIPGKHEVKELQKTAILGTAHILQKVLYVKVQ*
Ga0123353_130806602	3300010167	Termite Gut	GKYMSNIPGKHEVKELQKTAILGTAHILQKVKVKVK*
Ga0136643_100238901	3300010369	Termite Gut	TGTISKLFRKYVSNIPGKHEVKELQKTAILGTAHILQKVLM*
Ga0136643_100333741	3300010369	Termite Gut	KSFRKNVSNIPGKHEVKELQKTAILGTAHILQKVLM*
Ga0136643_101121711	3300010369	Termite Gut	KPFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLM*
Ga0136643_101248751	3300010369	Termite Gut	ISKSFRKYVSKIPGKHEVKELQKTAILGTAHILRKVLM*
Ga0136643_102200141	3300010369	Termite Gut	TGTISKSFRKYVSNIPGKHEVKELQKTAILGTAHILQKVLM*
Ga0136643_102552661	3300010369	Termite Gut	RSFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLM*
Ga0136643_103126411	3300010369	Termite Gut	ISESFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLM*
Ga0136643_106830631	3300010369	Termite Gut	SFDKYVSNIPGNHEVKELQKTAILGTAHILRKVQM*
Ga0136643_108221262	3300010369	Termite Gut	KYMSNIPGKHEVKELQKTAILGTAHILQKVKVKVK*
Ga0123354_100445821	3300010882	Termite Gut	NSFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLM*
Ga0123354_101569641	3300010882	Termite Gut	ATGTISKSFRKYVSNIPGNHEVKELQKRAILSTAHILRKVLM*
Ga0209424_10600271	3300027539	Termite Gut	GTISKSFRKYVSNIPGNHEVKELQKTAILGTAHILREVLT
Ga0209424_13156331	3300027539	Termite Gut	GTISKSFRKYVSNIPGNHEVKELQKTAILGTAHILLGKVLT
Ga0209423_100491381	3300027670	Termite Gut	ISKSFRKYVSNIPGNHEVKELQKTALFGTAHILRKVLT
Ga0209423_101878491	3300027670	Termite Gut	ISKSFRKYVSNIPGNHEVKELQKTAILGTAHILRKVLT
Ga0209423_102131991	3300027670	Termite Gut	TISKSFRKYVSNIPGNHEVKELQKTAILGTAHLLRKVLT
Ga0209423_103082322	3300027670	Termite Gut	TISKSCRKYVSAIPGNHEVKELQKTAILGTAHILRKVLT
Ga0209423_103598631	3300027670	Termite Gut	MSFRKYVSNIPGNHEVKELQKTAILGTADVLRKVLT
Ga0209423_103617592	3300027670	Termite Gut	IGATGTISMSFRKHVTNIPGNHEVKELQKTAILGTAHIVRKVLT
Ga0209423_105757021	3300027670	Termite Gut	SKSFRKYVSNITGNHEVKELQKTAILGTAHILQKVLT
Ga0209755_100364361	3300027864	Termite Gut	TGTISKSFRKYVSNIPAKHEVKELQKTAILGTAHILRKVLM
Ga0209755_105080011	3300027864	Termite Gut	ISNSFRKYVSNIPGKHEVKELQKTAILGTAHILRKVLM
Ga0209755_106258341	3300027864	Termite Gut	LKSFRKYVSNIPGKHEVKELQKTAILGTAHILQKVLM
Ga0209755_107263852	3300027864	Termite Gut	GTISNSFRKYVSNIPGKHEVKELQKTAILGTAHVLM
Ga0209628_102054801	3300027891	Termite Gut	ISKSFRKYVSDIPGNHDIKELQKTAILGTAHTLREVLT
Ga0209628_103119274	3300027891	Termite Gut	ISKSFRKYVSDIPGRHDVKVLQKTAILGTAHILQKVLT
Ga0209737_102173611	3300027904	Termite Gut	SFRKYVINIPGNHDIKELQKTAILGTAHILRKVLM
Ga0209737_102661841	3300027904	Termite Gut	SKSFRKYVSDIPGNHDIKELQKTAILGTAHILQKVLT
Ga0209738_100114881	3300027966	Termite Gut	ISKSFRKYVSNTPGNHEVKELQKTAILGTAHILREVLT
Ga0209738_101265891	3300027966	Termite Gut	TISKSFRKYVSNIPGNHEVKELQKTAILGTAHILQKVLT
Ga0209738_102191261	3300027966	Termite Gut	KSFRKYVSNIPGNHEVKELQKTAILGTAHILRTVLT
Ga0209738_103381012	3300027966	Termite Gut	ISKSFRKYASNIPGNHKVKELQKTAILGTAHILQKVLT
Ga0268261_1000737511	3300028325	Termite Gut	MPFRKDASNIPENHEVKELQKTAILGTAHILRKVLT
Ga0268261_100621131	3300028325	Termite Gut	GTISKSFRKYVSNIPGNHEVKELQKTAILGTAHILRKVLT
Ga0268261_102111501	3300028325	Termite Gut	GTISNSFRKYVSNIPGNHEVKELQKTAILGTAHILRKVLT
Ga0268261_102532452	3300028325	Termite Gut	SFRKYVSNIPGNHKVKELQKTAILGTAHILRKVLT
Ga0268261_102582441	3300028325	Termite Gut	KSFRKYVSNITGNHEVKELQKTAILGTAHILRKVLT
Ga0268261_102715125	3300028325	Termite Gut	GTISKSFRKYVSNIPGNHEVKELQKTAILGTAHILQKVLT
Ga0268261_103013913	3300028325	Termite Gut	KSFRKYVSNISGNHEVKELQKTAILGTAHILRKVLT
Ga0268261_104688893	3300028325	Termite Gut	SKSFRKYVSNIPGNHEVKELQKTAILGTAHILQEVLR
Ga0268261_104810461	3300028325	Termite Gut	ISKSFRKYVSNIPGNHEVKELQKTAILGTAHILRKVPT
Ga0268261_105128641	3300028325	Termite Gut	TISKSLRKYVSNIPGNHEVKELQKTAILGTAHILRKVLM
Ga0268261_105529512	3300028325	Termite Gut	TISKSFRKYVSNIPGNHEVKELQKTAILGTAHILRKLLT
Ga0268261_105672011	3300028325	Termite Gut	SKSFRKYVSNIPGNHEVKELQKTAILGTAHILRKVLT
Ga0268261_106739511	3300028325	Termite Gut	ATGTISKSFRKYVSNIPGNHEVKELQKTAILGTAHILREVLT
Ga0268261_107378673	3300028325	Termite Gut	SKSFRKYVSNIPGNHEVKELQKTAILGTAHILREVLT
Ga0268261_107684111	3300028325	Termite Gut	KSFRKYVSNIPGNHEVKELQKTAILGTAHILREVLT
Ga0268261_107823861	3300028325	Termite Gut	ATGTISKSFRKYVSNIPGNHEVKELQKTALLGTAHILRKVLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068975

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences