Metagenome / Metatranscriptome Family F069014

Basic Information
Family ID	F069014
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	53 residues
Representative Sequence	PGAAPPNMRKDLHLVLELARELGVTLYLGTQASLVADAGVATGHDDPRL
Number of Associated Samples	103
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.710 % of family members)
Environment Ontology (ENVO)	Unclassified (50.806 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.194 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.77% β-sheet: 0.00% Coil/Unstructured: 66.23%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF02627	CMD	17.74
PF03401	TctC	16.94
PF07883	Cupin_2	5.65
PF09382	RQC	3.23
PF00596	Aldolase_II	3.23
PF00535	Glycos_transf_2	1.61
PF02668	TauD	1.61
PF00563	EAL	1.61
PF10282	Lactonase	1.61
PF01176	eIF-1a	1.61
PF01613	Flavin_Reduct	1.61
PF00072	Response_reg	0.81
PF00682	HMGL-like	0.81
PF02775	TPP_enzyme_C	0.81
PF16036	Chalcone_3	0.81
PF13354	Beta-lactamase2	0.81
PF11799	IMS_C	0.81
PF12706	Lactamase_B_2	0.81
PF06629	MipA	0.81
PF02798	GST_N	0.81
PF05726	Pirin_C	0.81
PF04909	Amidohydro_2	0.81
PF00296	Bac_luciferase	0.81
PF00990	GGDEF	0.81
PF00146	NADHdh	0.81
PF12697	Abhydrolase_6	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	17.74
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	17.74
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	16.94
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	1.61
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	1.61
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.61
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.61
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.61
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.61
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.61
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	0.81
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	0.81
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.81
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.81
COG3713	Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family	Cell wall/membrane/envelope biogenesis [M]	0.81

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.87%
Host-Associated	Host-Associated	41.13%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	41.13%
Terrestrial	Environmental → Terrestrial	35.48%
Aquatic	Environmental → Aquatic	23.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	32.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.35%
Freshwater	Environmental → Aquatic → Freshwater	13.71%
Sediment	Environmental → Aquatic → Sediment	9.68%
Peat	Environmental → Terrestrial → Peat	2.42%
Floodplain	Environmental → Terrestrial → Floodplain	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.68%
Lake	Environmental → Aquatic → Freshwater → Lake	6.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.23%
Loam	Environmental → Terrestrial → Soil → Loam	3.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.61%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.61%
Sand	Environmental → Terrestrial → Soil → Sand	1.61%
River	Environmental → Aquatic → Freshwater → River	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.68%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	6.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.23%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	2.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.61%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.71%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.03%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.23%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	2.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.42%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.61%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.61%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.61%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.61%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.81%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater, Plankton	0.81%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.81%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.81%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.81%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005044	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0048	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012773	Freshwater microbial communities from Lake Simoncouche, Canada - S_140212_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012775	Freshwater microbial communities from Lake Montjoie, Canada - M_140625_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014208	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Groundwater well OW334 metaG	Environmental	Open in IMG/M
3300014303	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D1	Environmental	Open in IMG/M
3300014306	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021066	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3_10-13C	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027396	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_8h	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS1b_0799.00003360	2162886011	Miscanthus Rhizosphere	RWKKMLMPGAPGSALPNLRKDLHTALALAQELNVNLYLGRQASLIADASVATGRDAPLL
JGI11615J12901_105782952	3300000953	Soil	LKQIIRDGIANSSVLALWNDMGPRWKNMLGPSAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
JGI24738J21930_100899842	3300002075	Corn Rhizosphere	TPPNLRKDLHLVLELAQDLGVNLFVGTQASLIADAGVATGHKDPNL*
Ga0062593_1029772911	3300004114	Soil	NMRKDLHLVLQMAEALGVPLHIASQASRTADSGQATGLYSPDA*
Ga0062590_1001443231	3300004157	Soil	KDLHLVLQLAGELGVPLHVASQSSLIADAGLATGHADPRL*
Ga0062595_1025021371	3300004479	Soil	ELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0062591_1005950041	3300004643	Soil	RKDLHLVLEFARELGVNLYIGGQASLIADAGAATGHDSEQF*
Ga0071351_10791002	3300005044	Freshwater, Plankton	PDVPLPNLRKDLHLVLEMAESLGVSLPVARHASEVADSGAATGHDDPAL*
Ga0065712_106310092	3300005290	Miscanthus Rhizosphere	MLKATAPGAMPPNLRKDLHLVLEFARELGVNLYIGGQASLIADAGAATGHDSEQF*
Ga0065715_104274211	3300005293	Miscanthus Rhizosphere	WKKMLEATPPGTTPPNLRKDLHLVLELAQDLGVNLFVGTQASLIADAGVATGHKDPNL*
Ga0070676_104068742	3300005328	Miscanthus Rhizosphere	VLALWNDMGPRWKNMLGPSAPGSELPNLRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0070670_1004071922	3300005331	Switchgrass Rhizosphere	PPNLRKDLHLVLEFARELGVNLYIGGQASLIADAGVATGHDSEQF*
Ga0070669_1010922171	3300005353	Switchgrass Rhizosphere	VLALWNDMGPRWKNMLAPSAPGSELPNLRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0070675_1005230893	3300005354	Miscanthus Rhizosphere	LWNDMGPRWKKMLEASAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0070663_1006473962	3300005455	Corn Rhizosphere	GPRWKKMLMPGAPGSALPNLRKDLHTALALAQELNVNLYLGRQASLIADASVATGRDAPLL*
Ga0070678_1002655041	3300005456	Miscanthus Rhizosphere	PDAMPPNLRKDLHLVLEFARELGVNLYIGGQASLIADAGVATGHDSEQF*
Ga0068867_1005526541	3300005459	Miscanthus Rhizosphere	NSSVLALWNDMGPRWKKMLEASAPGSELPNMRKDLRTALELARELGVKLPVGTQVSQIADAGIATGRDNPLL*
Ga0068867_1006776842	3300005459	Miscanthus Rhizosphere	SAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0068867_1021497571	3300005459	Miscanthus Rhizosphere	PPPNMRKDLHLVLQLAGELGVQLHVASQSSLIAAAGLATGHADPRL*
Ga0070685_106938421	3300005466	Switchgrass Rhizosphere	LPNMRKDLHTALELERELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0070672_1000270821	3300005543	Miscanthus Rhizosphere	NLRKDLHLVLELAQDLGVNLFVGTQASLIADAGVATGHKDPNL*
Ga0070672_1002680141	3300005543	Miscanthus Rhizosphere	LHLVLEFARELGVNLYIGGQASLIADAGAATGHDSEQF*
Ga0070686_1007199542	3300005544	Switchgrass Rhizosphere	KKMLEASGPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0070704_1018631242	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KGMLAASAPGAPPPNMRKDLHLVLQLAGELGVPLHVASQSSLIADAGLATGHADPRL*
Ga0049085_101503091	3300005583	Freshwater Lentic	RKDLHLVLEYARELGVNLYLGTQGSMIADAGIASGHDNPLL*
Ga0068864_1015757301	3300005618	Switchgrass Rhizosphere	VLALWNDMGPRWKNMLGPSAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0068864_1024914032	3300005618	Switchgrass Rhizosphere	MLEASAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0068870_105877312	3300005840	Miscanthus Rhizosphere	WNDMGPRWKNMLGPSAPGSELPNLRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0068870_108732871	3300005840	Miscanthus Rhizosphere	PRWKKMLMPGAPGSALPNLRKDLHTALALAQELNVNLYLGRQAALIADASVATGRDAPLL
Ga0068863_1011972212	3300005841	Switchgrass Rhizosphere	EASAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0075422_103523591	3300006196	Populus Rhizosphere	WKDMLKPAAPGAEVPNLRKDLHTVLELARELGVDLPIGKEASRIADAGVATGHDKPLL*
Ga0075420_1003093041	3300006853	Populus Rhizosphere	WKGMLAPGAPGAPPPNMRKDLHLVLQLAEELGVPLQIASQASRIADAGKATGQGDPRL*
Ga0079216_113313452	3300006918	Agricultural Soil	PNLRKDLHLVLQMAEALGVPLHIASQASRIADSGQATGLYSPGA*
Ga0105106_107598662	3300009078	Freshwater Sediment	PNLRKDLHLALEMAHELGVTLYLGTQGSLVADAGVATGHGDPAL*
Ga0105107_107480922	3300009087	Freshwater Sediment	LRKDLHLVLEMAQSLGVTLYMGTQGSLVADAGVATGHADPRL*
Ga0105245_108788171	3300009098	Miscanthus Rhizosphere	RKDLHLVLEFARELGVNLYVGGQESLIADAGVATGHDSEQF*
Ga0105243_103673491	3300009148	Miscanthus Rhizosphere	KGMLKATAPGTIPPNMRKDLHLVLEFARELGVNLYIGGQASLIADAGAATGHDSEQF*
Ga0105243_120304841	3300009148	Miscanthus Rhizosphere	GPRWKKMLMPGAPGSALPNLRKDLHTALALAQELNVNLYLGRQAALIADASVATGRDAPLL*
Ga0114966_100311951	3300009161	Freshwater Lake	GLWEAMGPRWKSMLEAAPPGAELPNMRKDLHTALELARELGVNLPVGTQASLIAVAGVATGHDNPLL*
Ga0114966_104801782	3300009161	Freshwater Lake	PPPNLRKDLHLVLEFARELGVDLHLGSEASRVADGGIATGHDDLRA*
Ga0105238_107785161	3300009551	Corn Rhizosphere	APGSALPNLRKDLHTALALAQELNVNLYLGRQASLIADASVATGRDAPLL*
Ga0105252_103806711	3300009678	Soil	GPRWKDMMKPGEPGSPLPNLRKDMHTALELAREVGVELKVGAHASRVADSGAATGHDNPLL*
Ga0105239_106246943	3300010375	Corn Rhizosphere	NLRKDLHTALALAQELNVNLYLGRQASLIADASVATGRDAPLL*
Ga0134127_113770922	3300010399	Terrestrial Soil	KDLHLVLEFARELGVNLYIGGQASLIADAGVATGHDSEQF*
Ga0134122_114693391	3300010400	Terrestrial Soil	ILRKDQHLALELAKELGVPLYLGTQASRIADAGIATGHDNPLL*
Ga0137312_10056713	3300011400	Soil	PGAPPPNMRKDLHLVLELAGKLGVALPVATQASHTADAGVATGHGDPRL*
Ga0137441_10215131	3300011425	Soil	GPRWKDMLKPAAPGAELPNLRKDLHTVLELARELGVELHVGTHASRIADAGVATGHDNPLF*
Ga0137455_10588553	3300011429	Soil	KDMLKPAAPGAELPNLRKDLHTALELARELGVELHVGTQASRIADSGVATGHDNPLL*
Ga0137455_11001851	3300011429	Soil	LVLEFARELGVNLYIGGQASLIADAGVATGHDSEQF*
Ga0119955_11583582	3300012006	Freshwater	SAAGAALPNLRKDLHLVLEFARELGVSLPIATLGSEVADAGLATGHRDPRL*
Ga0137435_10220041	3300012232	Soil	PGAEVPNLRKDLHTVLELARELGVELHVGTHASRIADAGVATGHDNPLF*
Ga0137435_10242141	3300012232	Soil	PGAEVPNLRKDLHTVLELARELGVELHVGTHASRIADAGVATGHDNPLL*
Ga0138290_11272221	3300012773	Freshwater Lake	AALPNLRKDLHLVLEFARELGVSLPIATLGSEVADAGLATGHRDPRL*
Ga0138280_10172561	3300012775	Freshwater Lake	RKDLHLVLEFARALGVSLPIATRGSEVADAGLATGHRDPRL*
Ga0164298_103166772	3300012955	Soil	PPGTTPPNLRKDLHLVLELAQDLGVNLFVGTQASLIADAGVATGHKDPNL*
Ga0164309_113291771	3300012984	Soil	IIRDGIADSNVLALWNDMGPRWKNMLAPSAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDIPLL*
Ga0170791_157000181	3300013295	Freshwater	GAALPNLRKDLHLVLEFARALGVSLPIATRGSEVADTGLATGHRDPRL*
Ga0163162_102143231	3300013306	Switchgrass Rhizosphere	LRKDLHLVLELAQDLGVNLFVGTQASLIADAGVATGHKDPNL*
Ga0163162_108462381	3300013306	Switchgrass Rhizosphere	PGSELPNLRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL*
Ga0172379_109447311	3300014208	Groundwater	AAAPGAPLPNMRKDLHLVLELAQELGVELHIAGNASRVADAGIATGHDNSLI*
Ga0075358_10423501	3300014303	Natural And Restored Wetlands	LAMWQDMGPRWKSMLAAGAPGADLPNMRKDLHTALELARELGLSLPIGTQVSQVADAGIATGHDNPLL*
Ga0075346_11309851	3300014306	Natural And Restored Wetlands	GMLKPAAPGVPLPNMRKDLHLVLELAQELGVELHIGDHASRVADAGKAAGHDHPLI*
Ga0163163_131863922	3300014325	Switchgrass Rhizosphere	RDGIANSSVLALWNDMGPRWKKMLEASAPGSELPNMRKDLRTALELARELGVKLPVGTQVSQIADAGIATGRDNPLL*
Ga0157380_103197021	3300014326	Switchgrass Rhizosphere	PAAPGAEVPNLRKDLHTVLELARELGVDLPIGKEASRIADAGVATGHDNPLL*
Ga0180065_10646421	3300014878	Soil	ELGPRWKDMLKPGVPGAELPNLRKDLHTALGLARELGVELRVGTQASRVADSGVATGHDNPLL*
Ga0163144_110794931	3300015360	Freshwater Microbial Mat	LRKDLHLVLDLAKELGVALPVATEASRTADTGRATGHDDRRL*
Ga0163161_111557942	3300017792	Switchgrass Rhizosphere	LHLVLEFARELGVNLYIGGQASLIADAGAATGHDSEQF
Ga0184631_104123801	3300018070	Groundwater Sediment	DGIANSNVLAMWEDMGPRWKNMLGPSAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL
Ga0184624_100573743	3300018073	Groundwater Sediment	GSALPNLRKDLHTALALAQELNVNLYLGRQASLIADASVATGRDAPLL
Ga0184628_103910002	3300018083	Groundwater Sediment	DMGPRWKNMLAPSAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL
Ga0190265_103149241	3300018422	Soil	PGTPPPNMRKDLHLVLQLAGELGVPLHIASQASRIADAGAATGHGDPRL
Ga0190265_113803951	3300018422	Soil	DAAPPNMRKDLHLVLELAHELGVTLYLGTQGSLIADAGVATGHKEPGL
Ga0190265_131239093	3300018422	Soil	WKGMLAASAPGTPPPNMRKDLHLVLELAGELGVPLHIASQASRIADAGLATGHDDPRL
Ga0190275_130664792	3300018432	Soil	LPNMRKDLHLVLQMAEALGVPLRIASQASRVADSGAATGQGDARL
Ga0190268_118781811	3300018466	Soil	LAQSAPGAPPPNMRKDLHLVLELAGKLGVLLPVAAQASHTADAGVATGHGDPRL
Ga0190270_106860531	3300018469	Soil	TAPDATPPNMRKDLHLVLEMAHALGVPLFLGTQGSLVADSGVATGHDDPKL
Ga0190270_123930222	3300018469	Soil	IPPGATPPNMRKDLHLVLDMAHELGVTLYLGTQGSLIADAGVATGHDDPKL
Ga0190274_127755042	3300018476	Soil	PAAPGTPLPNIRKDLHSALELARELGLALPVGTLASRIADGGAAVGHADPKI
Ga0190274_129729362	3300018476	Soil	MRKDLHTALELAQELGVELPLATHASGIADAGSATGRDDPRL
Ga0190264_113772912	3300019377	Soil	GAAPPNMRKDLHLVLELARDLDLPLYLGTQASLVADAGVATGHDDPRL
Ga0190264_114141402	3300019377	Soil	PNMRKDLHLVLQLAGELGVPLHIASQASLTADAGVATGQGDPRL
Ga0193741_10336011	3300019884	Soil	LASRWKGMLAASAPGAPPPNLRKDLHLVLQLAAQLGVPLPIASQASRVADAGMATGHGDSRL
Ga0196963_105998822	3300020215	Soil	PNLRKDLHLVLELAGELGVPLHIASQASHIADAGVATGNSG
Ga0196980_10220391	3300021066	Soil	LGGRWKAMLAPPAQGAPLPNLRKDLHLVLELAGELGVPLHIASQASRIADAGVATGNSG
Ga0194060_100606284	3300021602	Anoxic Zone Freshwater	MLKPAPPRTGLHNMRKDLHSALALALAHELGVASYLGPQASQIADTGVATGHDNPAL
Ga0222622_106339732	3300022756	Groundwater Sediment	PPGTTPPNLRKDLHLVLELAQDLGVNLFVGTQASLIADAGVATGHKDPNL
Ga0209002_104742022	3300025289	Soil	MRKDLHSALELAHELGVVSYLGTQASLIADAGVATGHDNPLL
Ga0207656_101743712	3300025321	Corn Rhizosphere	KDLHVALALAQELNVNLYLGRQAALIADASVATGRDAPLL
Ga0207643_100231255	3300025908	Miscanthus Rhizosphere	TAPGTIPPNMRKDLHLVLEFARELGVNLYIGGQASLIADAGAATGHDSEQF
Ga0207643_107260421	3300025908	Miscanthus Rhizosphere	DLGPRWKKMLMPGAPGSALPNLRKDLHTALALAQELNVNLYLGRQASLIADASVATGRDAPLL
Ga0207662_101822193	3300025918	Switchgrass Rhizosphere	GIANSSVLALWNDMGPRWKKMLEASAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL
Ga0207681_105549203	3300025923	Switchgrass Rhizosphere	PGAAPPNMRKDLHLVLELARELGVTLYLGTQASLVADAGVATGHDDPRL
Ga0207681_109283001	3300025923	Switchgrass Rhizosphere	PSAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL
Ga0207694_108064511	3300025924	Corn Rhizosphere	APGSALPNLRKDLHTALALAQELNVNLYLGRQAALIADASVATGRDAPLL
Ga0207659_116684471	3300025926	Miscanthus Rhizosphere	MLKATPPDAMPPNLRKDLHLVLEFARELGVNLYIGGQASLIADAGVATGHDSEQF
Ga0207704_118024852	3300025938	Miscanthus Rhizosphere	MLEASAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL
Ga0207651_116608372	3300025960	Switchgrass Rhizosphere	WKKMLEASGPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL
Ga0207658_104344303	3300025986	Switchgrass Rhizosphere	QIIRDGIANSNVLALWNDMGPRWKNMLGPSAPGSELPNLRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL
Ga0207639_117785942	3300026041	Corn Rhizosphere	GAPGSALPNLRKDLHTALALAQELNVNLYLGRQAALIADASVATGRDAPLL
Ga0207641_113769332	3300026088	Switchgrass Rhizosphere	KKMLEASAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL
Ga0207676_102154683	3300026095	Switchgrass Rhizosphere	TPPDAMPPNLRKDLHLVLEFARELGVNLYIGGQASLIADAGVATGHDSEQF
Ga0207698_100150477	3300026142	Corn Rhizosphere	RWKKMLMPGAPGSALPNLRKDLHTALALAQELNVNLYLGRQAALIADASVATGRDAPLL
Ga0255146_10951151	3300027396	Freshwater	LPNMRKDLHMVLDLARALGVPVYLGAQGSLIADAGVATGHDDPTL
Ga0209074_105550062	3300027787	Agricultural Soil	GMLESAAPGAELPNLRKDMHSALELARKLGVDLKIGAYASGIADAGVAIGHDDPLL
Ga0209726_104633931	3300027815	Groundwater	PGAALPNLRKDLHSALELAHELGVVSYLGTQASLIADAGIATGHDNPAL
Ga0209726_105021362	3300027815	Groundwater	ELGPRWKNMLKPAPPGASLPNLRKDLHSALELAHELGVTSYLGTQASLIADAGVATGHDNPLL
Ga0209514_101398371	3300027819	Groundwater	VLQVWDELGPRWKNMLKPALPGASLPNLRKDLHSALELAHELGVVSYLGTQASLIADAGIATGHDNPLL
Ga0247822_110423521	3300028592	Soil	GPRWKNMLAPSAPGSELPNMRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPL
Ga0247820_109495592	3300028597	Soil	GAPLPNMRKDLHLVLQLAEELGVPLQIASQASRIADAGKATGQGDPRL
Ga0307498_101057102	3300031170	Soil	LALWNDMGPRWKNMLGPSAPGSELPNLRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPLL
Ga0307497_107245971	3300031226	Soil	VPNLRKDLHTVLELARELGVDLKLGTHASRIADSGVAIGHSDPLL
Ga0302323_1014362192	3300031232	Fen	KDLHLVIEFARELGVDLHIGTQASTIADAGIATGHDSDRF
Ga0302323_1024800401	3300031232	Fen	APGATPANLPKDLHLVLEFARELGVELPLGTHASQLADAGTATGRDDPRT
Ga0310813_109865061	3300031716	Soil	KDLHLVLEFARELGVNLYIGGQASLIADAGAATGHDSEQF
Ga0302321_1022025222	3300031726	Fen	LHLVLEFARELGVELPLGTHASQLADAGTATGRDDPRT
Ga0307405_109309781	3300031731	Rhizosphere	MLAASAPGTPPPNMRKDLHLVLQLAGELGVPLPIASLASRIADAGAATGHGDPRL
Ga0310900_117245352	3300031908	Soil	GPRWKNMLGPSAPGSELPNLRKDLHTALELARELGVKLPVGTQVSQVADAGIATGRDNPL
Ga0307412_107352021	3300031911	Rhizosphere	EATAPGATLPNMRKDLHLVLELAREIAVPLFVGSQASLVADAGVATGHDDPRL
Ga0307412_113329931	3300031911	Rhizosphere	KDLHLVLQLAGELGVPLYMASQASLIADAGVATGQADPRL
Ga0307412_117021772	3300031911	Rhizosphere	WKGMLAATPPDVTPPNLRKDLHLALEYARELGVNLYVGTQASLIADSGNATGREDPRL
Ga0310885_105678022	3300031943	Soil	WKGMLAPSAPGAPLPNMRKDLHLVLQMAEALGVPLHIASQASRTADSGQATGLYSPDA
Ga0307414_109027291	3300032004	Rhizosphere	LHLVLELAREIAVPLFVGSQASLVADAGVATGHDDPRL
Ga0307472_1025574792	3300032205	Hardwood Forest Soil	KDMLKPAAIGAEVPNLRKDLHTAIELARELGVDLRIGAHASRIADSGVATGHDDRLL
Ga0364943_0016297_2110_2256	3300034354	Sediment	GAELPNLRKDLHTVLELARELGVELHVGTHASRIADAGVATGHDNPLF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069014

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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