Metagenome Family F069024

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069024
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	85 residues
Representative Sequence	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMQGNIPEPPTAGFTAPYTSSIGTTGTMTIVSVG
Number of Associated Samples	99
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.42 %
% of genes near scaffold ends (potentially truncated)	33.87 %
% of genes from short scaffolds (< 2000 bps)	87.90 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.290 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (16.129 % of family members)
Environment Ontology (ENVO)	Unclassified (32.258 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.419 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 51.72% Coil/Unstructured: 48.28%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00226	DnaJ	10.48
PF00072	Response_reg	3.23
PF00155	Aminotran_1_2	3.23
PF03401	TctC	1.61
PF05193	Peptidase_M16_C	1.61
PF01494	FAD_binding_3	1.61
PF00496	SBP_bac_5	0.81
PF00873	ACR_tran	0.81
PF14833	NAD_binding_11	0.81
PF07681	DoxX	0.81
PF09346	SMI1_KNR4	0.81
PF00144	Beta-lactamase	0.81
PF13467	RHH_4	0.81
PF13414	TPR_11	0.81
PF00248	Aldo_ket_red	0.81
PF01348	Intron_maturas2	0.81
PF14534	DUF4440	0.81
PF08241	Methyltransf_11	0.81
PF02576	RimP_N	0.81
PF01797	Y1_Tnp	0.81
PF13924	Lipocalin_5	0.81
PF01425	Amidase	0.81
PF06439	3keto-disac_hyd	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.23
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.61
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.61
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.61
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.61
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0779	Ribosome maturation factor RimP	Translation, ribosomal structure and biogenesis [J]	0.81
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.81
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.81
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.81
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.81
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
All Organisms	root	All Organisms	38.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
cellular organisms	root	All Organisms → cellular organisms	38.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.16 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.61 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.32 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.61 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	10.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.42 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.81 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	8.06 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.42 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.81 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.81 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.81 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	8.06 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.81 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.81 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.81 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.81 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.81 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	8.06 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → environmental samples	0.81 %
unclassified Nocardiopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → unclassified Nocardiopsis	0.81 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.81 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.81 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.81 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	8.06 %
uncultured Blastococcus sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → environmental samples → uncultured Blastococcus sp.	0.81 %
Nocardiopsis sp. JB363	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → unclassified Nocardiopsis → Nocardiopsis sp. JB363	0.81 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.81 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.81 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.81 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105673160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1980	Open in IMG/M
3300004268\|Ga0066398_10160311	Not Available	570	Open in IMG/M
3300004479\|Ga0062595_100183457	Not Available	1270	Open in IMG/M
3300004633\|Ga0066395_10124406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1277	Open in IMG/M
3300005093\|Ga0062594_100892630	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300005332\|Ga0066388_100075233	All Organisms → cellular organisms → Bacteria	3711	Open in IMG/M
3300005332\|Ga0066388_102783310	Not Available	893	Open in IMG/M
3300005332\|Ga0066388_103698855	Not Available	781	Open in IMG/M
3300005332\|Ga0066388_104172690	Not Available	737	Open in IMG/M
3300005334\|Ga0068869_100055866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2878	Open in IMG/M
3300005343\|Ga0070687_101445870	Not Available	515	Open in IMG/M
3300005434\|Ga0070709_10281334	Not Available	1209	Open in IMG/M
3300005444\|Ga0070694_100068800	Not Available	2434	Open in IMG/M
3300005445\|Ga0070708_100165144	All Organisms → cellular organisms → Bacteria	2065	Open in IMG/M
3300005457\|Ga0070662_100356217	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300005713\|Ga0066905_100637333	Not Available	907	Open in IMG/M
3300005713\|Ga0066905_101917416	Not Available	548	Open in IMG/M
3300005718\|Ga0068866_10209666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1169	Open in IMG/M
3300005764\|Ga0066903_100575659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1941	Open in IMG/M
3300005764\|Ga0066903_100598093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1910	Open in IMG/M
3300005764\|Ga0066903_101759869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1182	Open in IMG/M
3300005764\|Ga0066903_106320024	Not Available	618	Open in IMG/M
3300005764\|Ga0066903_106398097	Not Available	614	Open in IMG/M
3300005764\|Ga0066903_106523416	Not Available	608	Open in IMG/M
3300005985\|Ga0081539_10171092	Not Available	1027	Open in IMG/M
3300006047\|Ga0075024_100493026	Not Available	641	Open in IMG/M
3300006050\|Ga0075028_100238819	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300006162\|Ga0075030_100928702	Not Available	686	Open in IMG/M
3300006196\|Ga0075422_10127432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1000	Open in IMG/M
3300006755\|Ga0079222_12475699	Not Available	521	Open in IMG/M
3300006806\|Ga0079220_10355588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → environmental samples → uncultured Blastococcus sp.	934	Open in IMG/M
3300006847\|Ga0075431_101523976	Not Available	627	Open in IMG/M
3300006854\|Ga0075425_100009514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10341	Open in IMG/M
3300009094\|Ga0111539_10465334	Not Available	1472	Open in IMG/M
3300009098\|Ga0105245_11787850	Not Available	667	Open in IMG/M
3300009100\|Ga0075418_12011689	Not Available	629	Open in IMG/M
3300009156\|Ga0111538_10608729	Not Available	1385	Open in IMG/M
3300009792\|Ga0126374_10337427	Not Available	1028	Open in IMG/M
3300010043\|Ga0126380_10042628	All Organisms → cellular organisms → Bacteria	2393	Open in IMG/M
3300010047\|Ga0126382_11582188	Not Available	607	Open in IMG/M
3300010358\|Ga0126370_10399953	Not Available	1128	Open in IMG/M
3300010358\|Ga0126370_11076852	Not Available	739	Open in IMG/M
3300010359\|Ga0126376_10445797	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300010359\|Ga0126376_12848403	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	533	Open in IMG/M
3300010360\|Ga0126372_10945617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	869	Open in IMG/M
3300010362\|Ga0126377_11283789	Not Available	804	Open in IMG/M
3300010362\|Ga0126377_11582345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	730	Open in IMG/M
3300010362\|Ga0126377_12485504	Not Available	594	Open in IMG/M
3300010366\|Ga0126379_10130954	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300010366\|Ga0126379_10900706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → unclassified Nocardiopsis → Nocardiopsis sp. JB363	987	Open in IMG/M
3300010376\|Ga0126381_101965317	Not Available	843	Open in IMG/M
3300010398\|Ga0126383_11661824	Not Available	728	Open in IMG/M
3300010398\|Ga0126383_11688002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	722	Open in IMG/M
3300010399\|Ga0134127_10415902	All Organisms → cellular organisms → Bacteria → Proteobacteria	1334	Open in IMG/M
3300010400\|Ga0134122_10132025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2013	Open in IMG/M
3300012948\|Ga0126375_12042698	Not Available	508	Open in IMG/M
3300012951\|Ga0164300_10550814	Not Available	670	Open in IMG/M
3300012960\|Ga0164301_10206659	Not Available	1256	Open in IMG/M
3300012971\|Ga0126369_10861855	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300012986\|Ga0164304_11095196	Not Available	637	Open in IMG/M
3300012988\|Ga0164306_11689060	Not Available	549	Open in IMG/M
3300013306\|Ga0163162_11608167	Not Available	741	Open in IMG/M
3300015371\|Ga0132258_10043891	All Organisms → cellular organisms → Bacteria	10183	Open in IMG/M
3300015371\|Ga0132258_10508974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	3012	Open in IMG/M
3300015371\|Ga0132258_10639662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2674	Open in IMG/M
3300015371\|Ga0132258_11000222	Not Available	2113	Open in IMG/M
3300015371\|Ga0132258_12248753	Not Available	1368	Open in IMG/M
3300015373\|Ga0132257_101861093	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300016270\|Ga0182036_11126238	Not Available	651	Open in IMG/M
3300016341\|Ga0182035_10325298	Not Available	1269	Open in IMG/M
3300016341\|Ga0182035_11999876	Not Available	526	Open in IMG/M
3300016371\|Ga0182034_10318305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1253	Open in IMG/M
3300016387\|Ga0182040_11674665	Not Available	543	Open in IMG/M
3300016404\|Ga0182037_11261188	Not Available	651	Open in IMG/M
3300016422\|Ga0182039_10239848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1471	Open in IMG/M
3300016445\|Ga0182038_10156846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1745	Open in IMG/M
3300016445\|Ga0182038_11584385	Not Available	589	Open in IMG/M
3300018429\|Ga0190272_11263905	Not Available	731	Open in IMG/M
3300021088\|Ga0210404_10507788	Not Available	681	Open in IMG/M
3300021178\|Ga0210408_10458983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1014	Open in IMG/M
3300021560\|Ga0126371_11441765	Not Available	818	Open in IMG/M
3300021560\|Ga0126371_11713658	All Organisms → cellular organisms → Bacteria → Proteobacteria	752	Open in IMG/M
(restricted) 3300023208\|Ga0233424_10088453	Not Available	1358	Open in IMG/M
3300025885\|Ga0207653_10006850	All Organisms → cellular organisms → Bacteria	3557	Open in IMG/M
3300025899\|Ga0207642_10960998	Not Available	549	Open in IMG/M
3300025906\|Ga0207699_11175548	Not Available	568	Open in IMG/M
3300025907\|Ga0207645_11118632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	531	Open in IMG/M
3300025934\|Ga0207686_11598991	Not Available	538	Open in IMG/M
3300025942\|Ga0207689_10038524	All Organisms → cellular organisms → Bacteria	3958	Open in IMG/M
3300025961\|Ga0207712_10095972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2193	Open in IMG/M
3300027010\|Ga0207839_1029485	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300027907\|Ga0207428_10249419	Not Available	1324	Open in IMG/M
3300031545\|Ga0318541_10265912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	954	Open in IMG/M
3300031679\|Ga0318561_10200536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1082	Open in IMG/M
3300031682\|Ga0318560_10480463	Not Available	673	Open in IMG/M
3300031736\|Ga0318501_10488041	Not Available	671	Open in IMG/M
3300031740\|Ga0307468_101083735	Not Available	712	Open in IMG/M
3300031744\|Ga0306918_11175262	Not Available	593	Open in IMG/M
3300031770\|Ga0318521_10346475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	880	Open in IMG/M
3300031780\|Ga0318508_1118963	Not Available	741	Open in IMG/M
3300031798\|Ga0318523_10466660	Not Available	626	Open in IMG/M
3300031854\|Ga0310904_11135753	Not Available	561	Open in IMG/M
3300031858\|Ga0310892_11032237	Not Available	581	Open in IMG/M
3300031879\|Ga0306919_10805505	Not Available	722	Open in IMG/M
3300031890\|Ga0306925_12015742	Not Available	544	Open in IMG/M
3300031894\|Ga0318522_10356712	Not Available	554	Open in IMG/M
3300031908\|Ga0310900_10511944	Not Available	935	Open in IMG/M
3300031910\|Ga0306923_11286112	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300031912\|Ga0306921_12277857	Not Available	569	Open in IMG/M
3300031941\|Ga0310912_10536059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	912	Open in IMG/M
3300031942\|Ga0310916_11262701	Not Available	609	Open in IMG/M
3300031945\|Ga0310913_10859921	Not Available	638	Open in IMG/M
3300031954\|Ga0306926_10688191	Not Available	1241	Open in IMG/M
3300031954\|Ga0306926_10692536	All Organisms → cellular organisms → Bacteria → Proteobacteria	1237	Open in IMG/M
3300031959\|Ga0318530_10367992	Not Available	596	Open in IMG/M
3300032001\|Ga0306922_10580983	Not Available	1189	Open in IMG/M
3300032013\|Ga0310906_10481348	Not Available	836	Open in IMG/M
3300032051\|Ga0318532_10158441	Not Available	804	Open in IMG/M
3300032059\|Ga0318533_10956179	Not Available	628	Open in IMG/M
3300032063\|Ga0318504_10364793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	687	Open in IMG/M
3300032174\|Ga0307470_11186136	Not Available	619	Open in IMG/M
3300032174\|Ga0307470_11537896	Not Available	554	Open in IMG/M
3300032180\|Ga0307471_100392910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1512	Open in IMG/M
3300032180\|Ga0307471_103286078	Not Available	573	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.65%
Host-Associated	Host-Associated	19.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.42%
Plants	Host-Associated → Plants	19.35%
Aquatic	Environmental → Aquatic	3.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.68%
Sediment	Environmental → Aquatic → Sediment	2.42%
Freshwater	Environmental → Aquatic → Freshwater	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.48%
Loam	Environmental → Terrestrial → Soil → Loam	16.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Lake	Environmental → Aquatic → Freshwater → Lake	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.23%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023208 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MG	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1056731602	3300000364	Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTVQGNIPEPPTAGFTAPYTSSIGTTGTMTIVSVD*
Ga0066398_101603111	3300004268	Tropical Forest Soil	KGAMLTDRRPRVLSCAGGSVRGDQPMKIIAKFTNNDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSVTLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0062595_1001834572	3300004479	Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0066395_101244062	3300004633	Tropical Forest Soil	MKIVAKFTTSDSKVTTANFDRATGTVVSDDGRRGTYKREGNILKFSGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG*
Ga0062594_1008926302	3300005093	Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNTLKISGDQSFTLTMQGNIPEPPTAGFTAPYTSSIGTTGTM
Ga0066388_1000752332	3300005332	Tropical Forest Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNSLKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0066388_1027833102	3300005332	Tropical Forest Soil	MKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSITLTIQGNVPEPPTAGFSAPYTSSIGTTGTMTIVSVG*
Ga0066388_1036988551	3300005332	Tropical Forest Soil	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0066388_1041726901	3300005332	Tropical Forest Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0068869_1000558664	3300005334	Miscanthus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNTLKISGDQSFTLTMQGNIPEPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0070687_1014458701	3300005343	Switchgrass Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTTSIGTTGTMT
Ga0070709_102813342	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTVQGSIPEPPTAGFTAPYTSSIGTTGTMTIVSVD*
Ga0070694_1000688001	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0070708_1001651441	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNTLKISGDQSFTLTMQGNIPEPPTAGFTAPYTSS
Ga0070662_1003562173	3300005457	Corn Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNTLKISGDQSFTLTMQGNIPEPPTAGFTAPYTSSIGTTGTMTIVS
Ga0066905_1006373332	3300005713	Tropical Forest Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNTLKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0066905_1019174161	3300005713	Tropical Forest Soil	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIV
Ga0068866_102096663	3300005718	Miscanthus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTTSIGTTGTMTIVSVG*
Ga0066903_1005756592	3300005764	Tropical Forest Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSITLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVA*
Ga0066903_1005980931	3300005764	Tropical Forest Soil	KIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSVTLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0066903_1017598693	3300005764	Tropical Forest Soil	FTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSVTLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0066903_1063200241	3300005764	Tropical Forest Soil	MKIIAKFTNSDGKVTTATFDRGTGTVVSDDGRKGTYKREGNVLKISGDQSITLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVD*
Ga0066903_1063980973	3300005764	Tropical Forest Soil	MKIVAKFTTSDSKVTTANFDRATGTVVSDDGRRGTYKREGNILKFSGDQSFTLTMEGDIPEPPPDGFTAPYTSSIGTTGTMTIVSVG*
Ga0066903_1065234162	3300005764	Tropical Forest Soil	MKIIAKFTTSDGKVTTATFDRGTGTVVSDDGRKGTYKREGNVLKISGDQSITLTIQGSIPEPPTAGFTAPYASSLGTKGTMTIVSVD*
Ga0081539_101710922	3300005985	Tabebuia Heterophylla Rhizosphere	MKIVAKFTTSDGKVTTATFDRGTGTVVSDDGRKGTYKREGNVLKISGDQSITLTVQGNIPEPLTAGFTAPYTSSTGTKGTMTIVSVG*
Ga0075024_1004930262	3300006047	Watersheds	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVDLTMQGNIPEPLTAGFTAPYTSSIGTKGTMTIVSIG*
Ga0075028_1002388192	3300006050	Watersheds	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNAINISGDQSVTLTMQGTVPEPLTAGFTAPYTSSIGTKGTMTIVSIG*
Ga0075030_1009287021	3300006162	Watersheds	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSLDITMQGNIPEPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0075422_101274323	3300006196	Populus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNVPDPPTAGFTAPYTTSIGTTGTMTIVSVD*
Ga0079222_124756991	3300006755	Agricultural Soil	MKITAKFTTSEGKVTTATFDRGTGTVVSDDGRKGTYKREGNALKISGDQSITLTIEGSIPEPPTAGFTAPYTSSIGT
Ga0079220_103555882	3300006806	Agricultural Soil	MKITAKFTTSEGKVTTATFDRGTGTVVSDDGRKGTYKREGNALKISGDQSITLTIEGSIPEPPTAGFTAPYTSSIGTSGTMTIVSVE*
Ga0075431_1015239762	3300006847	Populus Rhizosphere	MKIIAKFTNSDGKVTTATFDRTTGTVVSDDGRKGTYKREGNTLEISGDQSLTLTIQGNIPEPPTAGFTAPYTSSIGTKGTMTIVSVG*
Ga0075425_1000095146	3300006854	Populus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTVQGNIPEPPTAGFTAPYTSSIGTTGTMTIVFVD*
Ga0111539_104653342	3300009094	Populus Rhizosphere	MKITAKFTNSDGQVTTAIFDRATGTVASDDGRKGTYKREGNALKISGDQNITLTIEGSIPEPPTAGFTAPYTSSIGTKGTMTIVSVD*
Ga0105245_117878502	3300009098	Miscanthus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGLTAPYTTSIGTTGTMTIVSVG*
Ga0075418_120116891	3300009100	Populus Rhizosphere	QPMKIVARFTNSDGKVTTATFDRATGSVVSDDGRKGTYKREGNILKISGDQSFTITMQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0111538_106087291	3300009156	Populus Rhizosphere	TATFDRATGTVVSDDARKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0126374_103374272	3300009792	Tropical Forest Soil	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG*
Ga0126380_100426282	3300010043	Tropical Forest Soil	MKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSVTLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0126382_115821881	3300010047	Tropical Forest Soil	FTTSDGKVTTATFDRATGTVVSDDGCKGTYKREGNILKISGDQSVTLTIQGNVPDPPTAGFTAPYSSSIGTTGTMTIVSVG*
Ga0126370_103999531	3300010358	Tropical Forest Soil	MKIVAKFTTSDGKVATATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG*
Ga0126370_110768521	3300010358	Tropical Forest Soil	MKIVAKFTTSDSKVTTANFDRATGTVVSDDGRRGTYKREGNILKFSGDQSFTLTMEGNIPEPPPDGFTAPYTSSIGTTGTMTI
Ga0126376_104457971	3300010359	Tropical Forest Soil	MKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNSLKISGDQSVTLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0126376_128484031	3300010359	Tropical Forest Soil	KVTTATFDRATGTVVSDDGRKGTYKREGNILKISSDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG*
Ga0126372_109456171	3300010360	Tropical Forest Soil	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRTGTYKREGNVLKISGDQSLDITMQGNIPEPPTAGFTAPYTSSIGTTG
Ga0126377_112837891	3300010362	Tropical Forest Soil	MKIIAKFTNSDGKVTTATFDRATGTVVSDDGRNGTYKREGNVLKISGDQSVTLTIQGNVPDPPTAGFTAPYTSSMGTTGTMTIVSVG*
Ga0126377_115823451	3300010362	Tropical Forest Soil	KFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0126377_124855041	3300010362	Tropical Forest Soil	MWCSGRPTHENRRQVQTSDGKVTTATFDRATGTVVSDDGRNGTYKREGNTLKIAGDQSFTITMQGNIPEPPAAGFTTPYTTSIGTAGTMTIVSVD*
Ga0126379_101309543	3300010366	Tropical Forest Soil	MKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSVTLTIQGNVPDPPTAGFTAPYTSSMGTTGTMTIVSVG*
Ga0126379_109007062	3300010366	Tropical Forest Soil	MKIIAKFTTSEGKVTTATFDRATGTVVSDDGRKGTYKREGNSLKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0126381_1019653171	3300010376	Tropical Forest Soil	MKIIAKFTNNDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSVTLTIQGNVPDPPTAGFTAPYTSSMGTTGTMTIVSVG*
Ga0126383_116618241	3300010398	Tropical Forest Soil	MKIVAKFTTSDGKATTATFDRATGTVVSDDGRKGTYKREGNILKFSGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0126383_116880021	3300010398	Tropical Forest Soil	KFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISSDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG*
Ga0134127_104159021	3300010399	Terrestrial Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNTLKISGDQSFTLTMQGNIPEPPTAGFTAPYTSSIGTAGTMTIVSVG*
Ga0134122_101320252	3300010400	Terrestrial Soil	MKIMAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGLTAPYTTSIGTTGTMTIVSVG*
Ga0126375_120426981	3300012948	Tropical Forest Soil	MKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0164300_105508142	3300012951	Soil	MKIIAKFSTSDGKATTATFDRATGTVASDDGRKGTYKREGNILKISGDQSFTLTMQGNIPEPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0164301_102066592	3300012960	Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTAGAMTIVSVG*
Ga0126369_108618551	3300012971	Tropical Forest Soil	ATFDRASGTVVSDDGRKGTYKREGNILKISGDQSITLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0164304_110951961	3300012986	Soil	MKIIAKFTTSDGKVTTATFDRATGTVASDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTAGTMTIVSVG*
Ga0164306_116890601	3300012988	Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTAGTMTIVSVG*
Ga0163162_116081671	3300013306	Switchgrass Rhizosphere	QGGQPMKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0132258_100438915	3300015371	Arabidopsis Rhizosphere	MKIIAKFTTSDGKVTTATFDRTTGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTTGTMTIVSVG*
Ga0132258_105089743	3300015371	Arabidopsis Rhizosphere	MKIIAKFSNSDAKVTTATFDRGAGTVVSDDGRKGTYKREGNVLKISGEQSMDITIQGNIPEPPTAGFTAPYTTSIGTKGTMTIVSVG*
Ga0132258_106396622	3300015371	Arabidopsis Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTAGTMTIVSVGG*
Ga0132258_110002223	3300015371	Arabidopsis Rhizosphere	GKVTTATFDRGTGTVVSDDGRKGTYKREGNALKISGDQSITLTIQGSIPEPPTAGFTAPYTSSTGTTGTMTIVSVD*
Ga0132258_122487532	3300015371	Arabidopsis Rhizosphere	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRQGTYKREGNVLKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG*
Ga0132257_1018610932	3300015373	Arabidopsis Rhizosphere	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG*
Ga0182036_111262382	3300016270	Soil	MKIVAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSAG
Ga0182035_103252982	3300016341	Soil	MKIVAKFKTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0182035_119998761	3300016341	Soil	NSDGKVTTATFDRATGTVGSDDGRKGTYKREGNVLKISGDQSITLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0182034_103183052	3300016371	Soil	VKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0182040_116746651	3300016387	Soil	VKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSITLTIQGNVPDPPTAGFTAPYSSSIGTTGTMTIVSVG
Ga0182037_112611881	3300016404	Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTHKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0182039_102398481	3300016422	Soil	VCRVWCSGRPTHENRRQFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0182038_101568463	3300016445	Soil	VWCSGRPTHENRRHKGTYKRQGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0182038_115843851	3300016445	Soil	MKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSITLTIQGNVPDPPTAGFTAPYTSSIGTTATMSIVSAG
Ga0190272_112639051	3300018429	Soil	MKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGSTLEISGDQSLILTIQGNIPEPPTAGFTAPYTSSIGTKGTMTIVSVG
Ga0210404_105077882	3300021088	Soil	TTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTVQGSIPEPPTAGFTAPYTSSIGTTGTMTIVSVD
Ga0210408_104589832	3300021178	Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTVQGSIPEPPTAGFTAPYTSSIGTTGTMTIVSVD
Ga0126371_114417651	3300021560	Tropical Forest Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSVTLTIQGNVPDPPTAGFTAPYTSSMGTTGTMTIVSVG
Ga0126371_117136583	3300021560	Tropical Forest Soil	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRKVTYKREGNILKISSDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTM
(restricted) Ga0233424_100884532	3300023208	Freshwater	MKLVVKFAATDGKVTTATFDRASGSVESDDGRKGTYAREGNVLKFFGDQNFSVTMQTEVPANPSAGFTTPYTTSMGTAGTLTIVSVG
Ga0207653_100068503	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNTLKISGDQSFTLTMQGNIPEPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0207642_109609981	3300025899	Miscanthus Rhizosphere	FTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTTSIGTTGTMTIVSVG
Ga0207699_111755481	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	KIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTVQGSIPEPPTAGFTAPYTSSIGTTGTMTIVSVD
Ga0207645_111186322	3300025907	Miscanthus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTTSIGTTGTMTIVSVG
Ga0207686_115989911	3300025934	Miscanthus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTT
Ga0207689_100385243	3300025942	Miscanthus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMQGNIPEPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0207712_100959721	3300025961	Switchgrass Rhizosphere	KVTTATFDRATGTVVSDDGRKGTYKREGNTLKISGDQSFTLTMQGNIPEPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0207839_10294852	3300027010	Tropical Forest Soil	MKITAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSLDITVQGNIPEPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0207428_102494191	3300027907	Populus Rhizosphere	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0318541_102659122	3300031545	Soil	MKIVAKFMTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0318561_102005362	3300031679	Soil	VCRVWCSGRPTHENRRHKGTYKRQGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0318560_104804632	3300031682	Soil	VCRVWCSGRPTHENRRHKGTYKRQGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTI
Ga0318501_104880411	3300031736	Soil	MKIVAKFKTSDGKVTTATFDRATGTVVSDDGPKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0307468_1010837351	3300031740	Hardwood Forest Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGIIPDPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0306918_111752622	3300031744	Soil	VKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSAG
Ga0318521_103464751	3300031770	Soil	MKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0318508_11189631	3300031780	Soil	MKIVAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0318523_104666602	3300031798	Soil	MKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0310904_111357531	3300031854	Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTAGTMTIVSVGG
Ga0310892_110322371	3300031858	Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTAGTMTIVSVG
Ga0306919_108055051	3300031879	Soil	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSITLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0306925_120157421	3300031890	Soil	FTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSAG
Ga0318522_103567121	3300031894	Soil	CRVWCSGRPTHENRRHKGTYKRQGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0310900_105119442	3300031908	Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIG
Ga0306923_112861122	3300031910	Soil	VKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTM
Ga0306921_122778571	3300031912	Soil	TTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSITLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0310912_105360591	3300031941	Soil	TNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0310916_112627011	3300031942	Soil	VKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSITLTIQGNVPEPPTAGFTAPYTSSIGTMGTMIIVSVG
Ga0310913_108599211	3300031945	Soil	MKIVAKFMTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGT
Ga0306926_106881912	3300031954	Soil	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0306926_106925363	3300031954	Soil	VKIIAKFTNSDGKVTTATFDRATGTVVSDDGRKGTYKREGNVLKISGDQSITLTIQGNVPDPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0318530_103679921	3300031959	Soil	MKIIAKFTNSDGKVTTATFDRGTGAVVSDDGRKGTYKREGNVLKISGDQSITLTIQGNIPEPLTAGFTAPYTSSIGTTGTMTIVSVD
Ga0306922_105809831	3300032001	Soil	MKIVAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSAG
Ga0310906_104813481	3300032013	Soil	ATFDRGTGTVVSDDGRKGTYKREGNALKISGDQSITLTIQGSIPEPPTAGFTAPYTSSTGTTGTMTIVSVD
Ga0318532_101584412	3300032051	Soil	MKIVAKFMTSDGKVTTATFDRATCTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0318533_109561791	3300032059	Soil	TTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSVTLTIQGNVPEPPTAGFTAPYTSSIGTTGTMTIVSAG
Ga0318504_103647932	3300032063	Soil	FMTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTLTMEGDIPEPPPAGFTAPYTSSIGTTGTMTIVSVG
Ga0307470_111861361	3300032174	Hardwood Forest Soil	MKIIAKFTASDGKVTTATFDRATGTVVSDDGRKGTYKREGNILRISGDQSFTITMQGNIPEPPTAGFTAPYNTSIGTTGTMTIVSVG
Ga0307470_115378961	3300032174	Hardwood Forest Soil	DGKVTTAAFDRATGTVVSDDGRKGTYKREGNVLKISGDQSFTITMQGNIPDPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0307471_1003929103	3300032180	Hardwood Forest Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILKISGDQSFTITMQGDIPDPPTAGFTAPYTSSIGTTGTMTIVSVG
Ga0307471_1032860781	3300032180	Hardwood Forest Soil	MKIIAKFTTSDGKVTTATFDRATGTVVSDDGRKGTYKREGNILRISGDQSFTITMQGNIPEPPTAGFTAPYNTSIGTTGTMTIVSVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters