Metagenome / Metatranscriptome Family F069165

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069165
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	110 residues
Representative Sequence	MRVPAFATIASFVLLAAPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR
Number of Associated Samples	98
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.61 %
% of genes near scaffold ends (potentially truncated)	34.68 %
% of genes from short scaffolds (< 2000 bps)	84.68 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.645 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.839 % of family members)
Environment Ontology (ENVO)	Unclassified (31.452 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.323 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 9.22% β-sheet: 12.77% Coil/Unstructured: 78.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF04403	PqiA	11.29
PF02735	Ku	9.68
PF11146	DUF2905	4.03
PF03176	MMPL	4.03
PF05239	PRC	2.42
PF01494	FAD_binding_3	1.61
PF09123	DUF1931	0.81
PF02705	K_trans	0.81
PF13570	PQQ_3	0.81
PF10025	DUF2267	0.81
PF06831	H2TH	0.81
PF03886	ABC_trans_aux	0.81
PF14417	MEDS	0.81
PF00571	CBS	0.81
PF00210	Ferritin	0.81
PF06827	zf-FPG_IleRS	0.81
PF01914	MarC	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2995	Intermembrane transporter PqiABC subunit PqiA	Cell wall/membrane/envelope biogenesis [M]	11.29
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	9.68
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	4.03
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	4.03
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.23
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.61
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.61
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.61
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.81
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.81
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
All Organisms	root	All Organisms	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
cellular organisms	root	All Organisms → cellular organisms	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.39 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.84 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.61 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.81 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.42 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.42 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	2.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.61 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	1.61 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.81 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	2.42 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	2.42 %
Enhydrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter	1.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.61 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.81 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Beijerinckiaceae bacterium RH AL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	2.42 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	1.61 %
Azospirillum lipoferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	1.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.61 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.81 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.81 %
Azospirillum halopraeferens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum halopraeferens	0.81 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Beijerinckiaceae bacterium RH AL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	2.42 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	1.61 %
Azospirillum lipoferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	1.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.61 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	0.81 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.81 %
Azospirillum halopraeferens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum halopraeferens	0.81 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10529245	Not Available	562	Open in IMG/M
3300002245\|JGIcombinedJ26739_101119686	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300003505\|JGIcombinedJ51221_10010565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3001	Open in IMG/M
3300003505\|JGIcombinedJ51221_10145984	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300003505\|JGIcombinedJ51221_10405536	Not Available	553	Open in IMG/M
3300005171\|Ga0066677_10113657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1449	Open in IMG/M
3300005176\|Ga0066679_10378919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum halopraeferens	926	Open in IMG/M
3300005179\|Ga0066684_10352290	Not Available	985	Open in IMG/M
3300005184\|Ga0066671_10138648	All Organisms → cellular organisms → Bacteria → Proteobacteria	1403	Open in IMG/M
3300005184\|Ga0066671_10138980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1401	Open in IMG/M
3300005187\|Ga0066675_11410535	Not Available	510	Open in IMG/M
3300005434\|Ga0070709_11361869	Not Available	574	Open in IMG/M
3300005436\|Ga0070713_100804555	All Organisms → cellular organisms → Bacteria → Proteobacteria	901	Open in IMG/M
3300005437\|Ga0070710_10505698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	828	Open in IMG/M
3300005451\|Ga0066681_10773818	Not Available	581	Open in IMG/M
3300005454\|Ga0066687_10085954	All Organisms → cellular organisms → Bacteria → Proteobacteria	1557	Open in IMG/M
3300005559\|Ga0066700_11131134	Not Available	511	Open in IMG/M
3300005560\|Ga0066670_10697629	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300005569\|Ga0066705_10238553	All Organisms → cellular organisms → Bacteria → Proteobacteria	1150	Open in IMG/M
3300005575\|Ga0066702_10275321	Not Available	1027	Open in IMG/M
3300005576\|Ga0066708_10300258	Not Available	1028	Open in IMG/M
3300005921\|Ga0070766_10070994	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300006175\|Ga0070712_100242805	All Organisms → cellular organisms → Bacteria → Proteobacteria	1435	Open in IMG/M
3300006175\|Ga0070712_101095092	Not Available	691	Open in IMG/M
3300006176\|Ga0070765_100778564	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300006176\|Ga0070765_101329831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300006755\|Ga0079222_11054351	Not Available	707	Open in IMG/M
3300006796\|Ga0066665_11327690	Not Available	553	Open in IMG/M
3300006797\|Ga0066659_10367986	Not Available	1121	Open in IMG/M
3300006800\|Ga0066660_10334189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1223	Open in IMG/M
3300006806\|Ga0079220_10573654	Not Available	794	Open in IMG/M
3300006904\|Ga0075424_100917325	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300007258\|Ga0099793_10063719	Not Available	1653	Open in IMG/M
3300007788\|Ga0099795_10025777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1975	Open in IMG/M
3300007788\|Ga0099795_10292833	Not Available	714	Open in IMG/M
3300009143\|Ga0099792_10002429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7132	Open in IMG/M
3300009143\|Ga0099792_10209845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1113	Open in IMG/M
3300009148\|Ga0105243_12644540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	542	Open in IMG/M
3300011120\|Ga0150983_15115723	Not Available	680	Open in IMG/M
3300011120\|Ga0150983_16140514	Not Available	851	Open in IMG/M
3300012202\|Ga0137363_10786548	Not Available	807	Open in IMG/M
3300012203\|Ga0137399_10118210	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300012208\|Ga0137376_10238345	Not Available	1577	Open in IMG/M
3300012362\|Ga0137361_11894032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	513	Open in IMG/M
3300012582\|Ga0137358_10533017	Not Available	790	Open in IMG/M
3300012683\|Ga0137398_11186203	Not Available	522	Open in IMG/M
3300012685\|Ga0137397_10013978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5619	Open in IMG/M
3300012685\|Ga0137397_10605285	Not Available	815	Open in IMG/M
3300012917\|Ga0137395_10266272	Not Available	1207	Open in IMG/M
3300012918\|Ga0137396_10157556	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300012922\|Ga0137394_10486586	Not Available	1049	Open in IMG/M
3300012924\|Ga0137413_11582421	Not Available	535	Open in IMG/M
3300012927\|Ga0137416_11693789	Not Available	577	Open in IMG/M
3300012944\|Ga0137410_10392931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	1116	Open in IMG/M
3300015245\|Ga0137409_10286158	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300018431\|Ga0066655_10279264	Not Available	1080	Open in IMG/M
3300018433\|Ga0066667_11119097	Not Available	682	Open in IMG/M
3300018433\|Ga0066667_11823523	Not Available	551	Open in IMG/M
3300018468\|Ga0066662_11069372	Not Available	804	Open in IMG/M
3300018482\|Ga0066669_10373859	Not Available	1195	Open in IMG/M
3300020199\|Ga0179592_10106662	Not Available	1287	Open in IMG/M
3300020579\|Ga0210407_10049535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3135	Open in IMG/M
3300020579\|Ga0210407_11125973	Not Available	594	Open in IMG/M
3300020580\|Ga0210403_10062961	All Organisms → cellular organisms → Bacteria → Proteobacteria	2975	Open in IMG/M
3300020581\|Ga0210399_10098859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	2386	Open in IMG/M
3300020581\|Ga0210399_10129474	All Organisms → cellular organisms → Bacteria → Proteobacteria	2077	Open in IMG/M
3300020583\|Ga0210401_10096001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2785	Open in IMG/M
3300020583\|Ga0210401_10102967	All Organisms → cellular organisms → Bacteria → Proteobacteria	2682	Open in IMG/M
3300020583\|Ga0210401_10486756	All Organisms → cellular organisms → Bacteria → Proteobacteria	1096	Open in IMG/M
3300021088\|Ga0210404_10184704	Not Available	1111	Open in IMG/M
3300021170\|Ga0210400_10049564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3269	Open in IMG/M
3300021170\|Ga0210400_10171930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1753	Open in IMG/M
3300021171\|Ga0210405_10277122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1326	Open in IMG/M
3300021171\|Ga0210405_10477847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	978	Open in IMG/M
3300021178\|Ga0210408_10365934	Not Available	1149	Open in IMG/M
3300021315\|Ga0179958_1152786	Not Available	513	Open in IMG/M
3300021404\|Ga0210389_10078481	All Organisms → cellular organisms → Bacteria	2535	Open in IMG/M
3300021404\|Ga0210389_10144453	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300021405\|Ga0210387_10933813	Not Available	762	Open in IMG/M
3300021405\|Ga0210387_11568726	Not Available	561	Open in IMG/M
3300021420\|Ga0210394_11776363	Not Available	515	Open in IMG/M
3300021478\|Ga0210402_10903822	Not Available	809	Open in IMG/M
3300021479\|Ga0210410_10940038	Not Available	752	Open in IMG/M
3300021479\|Ga0210410_11308167	Not Available	617	Open in IMG/M
3300021559\|Ga0210409_10395190	All Organisms → cellular organisms → Bacteria → Proteobacteria	1238	Open in IMG/M
3300022513\|Ga0242667_1051079	Not Available	526	Open in IMG/M
3300022713\|Ga0242677_1041172	Not Available	651	Open in IMG/M
3300022718\|Ga0242675_1047723	Not Available	708	Open in IMG/M
3300024288\|Ga0179589_10140189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1024	Open in IMG/M
3300024288\|Ga0179589_10393025	Not Available	635	Open in IMG/M
3300025898\|Ga0207692_10413066	Not Available	844	Open in IMG/M
3300025898\|Ga0207692_10559346	Not Available	732	Open in IMG/M
3300026340\|Ga0257162_1023357	Not Available	749	Open in IMG/M
3300026369\|Ga0257152_1028912	Not Available	596	Open in IMG/M
3300026371\|Ga0257179_1060913	Not Available	501	Open in IMG/M
3300026494\|Ga0257159_1003489	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300026498\|Ga0257156_1036221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	1004	Open in IMG/M
3300026508\|Ga0257161_1069230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	722	Open in IMG/M
3300026550\|Ga0209474_10141209	Not Available	1576	Open in IMG/M
3300026552\|Ga0209577_10735699	Not Available	554	Open in IMG/M
3300026555\|Ga0179593_1202415	All Organisms → cellular organisms → Bacteria	2721	Open in IMG/M
3300026557\|Ga0179587_10990420	Not Available	554	Open in IMG/M
3300026998\|Ga0208369_1027989	Not Available	556	Open in IMG/M
3300026999\|Ga0207949_1020841	Not Available	601	Open in IMG/M
3300026999\|Ga0207949_1029154	Not Available	510	Open in IMG/M
3300027512\|Ga0209179_1087580	Not Available	689	Open in IMG/M
3300027521\|Ga0209524_1128254	Not Available	528	Open in IMG/M
3300027537\|Ga0209419_1088761	Not Available	613	Open in IMG/M
3300027565\|Ga0209219_1022293	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300027583\|Ga0209527_1109395	Not Available	619	Open in IMG/M
3300027610\|Ga0209528_1072799	Not Available	760	Open in IMG/M
3300027635\|Ga0209625_1006123	Not Available	2614	Open in IMG/M
3300027635\|Ga0209625_1007987	All Organisms → cellular organisms → Bacteria	2295	Open in IMG/M
3300027684\|Ga0209626_1020700	Not Available	1568	Open in IMG/M
3300027727\|Ga0209328_10029304	Not Available	1694	Open in IMG/M
3300027903\|Ga0209488_10018424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5070	Open in IMG/M
3300028047\|Ga0209526_10079878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2303	Open in IMG/M
3300028047\|Ga0209526_10563659	Not Available	734	Open in IMG/M
3300028536\|Ga0137415_10367757	Not Available	1242	Open in IMG/M
3300030785\|Ga0102757_11129282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	583	Open in IMG/M
3300030785\|Ga0102757_11178459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	572	Open in IMG/M
3300030991\|Ga0073994_12270506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	800	Open in IMG/M
3300031039\|Ga0102760_10942629	Not Available	856	Open in IMG/M
3300031039\|Ga0102760_10964013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	712	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.39%
Host-Associated	Host-Associated	1.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.39%
Plants	Host-Associated → Plants	1.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.58%
Loam	Environmental → Terrestrial → Soil → Loam	25.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	16.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_105292452	3300001661	Forest Soil	MRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGXKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
JGIcombinedJ26739_1011196862	3300002245	Forest Soil	MRVPALPTIASFVLLAAPALAQTSNITGGPLGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKILMEVSPDQMQAVIER
JGIcombinedJ51221_100105652	3300003505	Forest Soil	MRVHALPTIASFVLLAAPALAQTSNITGGPLGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSESTTR*
JGIcombinedJ51221_101459841	3300003505	Forest Soil	MRVPAFATIASFVLLAVPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR*
JGIcombinedJ51221_104055361	3300003505	Forest Soil	MRVPSFPMIASFVLLAAPAFAQTSSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVXPDQMQAVIERTGSSSPPSDSTTR*
Ga0066677_101136572	3300005171	Soil	MRVPAFATIASVVLLAAPAFAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0066679_103789191	3300005176	Soil	MRVPAFATIASVVLLAAPAFAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYVIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0066684_103522901	3300005179	Soil	MRVPAFATIASVVLLAAPAFAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR*
Ga0066671_101386482	3300005184	Soil	MRVPAFATIASFVLLAAPALAQTSNMTGGQPGDTSTSSRVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0066671_101389802	3300005184	Soil	MRVPALPTIASFVLLAAPALAQTSNMTGGQLGDTSTSSHVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKIVMEVSPDQLQAVI
Ga0066675_114105351	3300005187	Soil	MRVPAFATIASFALLAAPALAQTSNITAGQPSDTSTSSHTPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0070709_113618692	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRVPAFATIASFVLLAAPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIRAQAPDGSKIVMEVSPD
Ga0070713_1008045552	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRVPAFATIASFVLLAAPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR*
Ga0070710_105056981	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRVPALPIVASLVLFAVPALAQTSNMTGGQLSDTSTSSRIPPDTAVTLDTQQKLKQSLEQSGFKNVVVVPEAFIIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPSSTGTTR*
Ga0066681_107738181	3300005451	Soil	MRVPAFAIVASFVLFTVPALAQTSSMTGSQPSDPSTSSRLPPDTAVTLDTQQKLRESLEKNGFKNVAVVPVAYVIRAKAPDGSKIVMEVTPDAMQAVIERTGSSSHPSDSPSR*
Ga0066687_100859542	3300005454	Soil	MRVPAFATIASFVLLAVPAFAQTSNMPGGQPSDTSTSSHTPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0066700_111311341	3300005559	Soil	MRVLAFATIASFVLLAAPALAQTSNMTGGQTGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0066670_106976291	3300005560	Soil	APAFAQTSTMTGGQPSDTSTSSHVPPDTAITLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR*
Ga0066705_102385531	3300005569	Soil	MRVPALPTIASFVLLAAPALAQTSNMTGGQLGDTSTSSHVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKIVMEVSPDQLQAVIERTGSSSPPSDSTTR*
Ga0066702_102753212	3300005575	Soil	MRVPAFATIASVVLLAAPAFAQTSNMTDGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0066708_103002581	3300005576	Soil	MRVPAFATIASFVLLAAPAFAQTSTMTGGHPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0070766_100709944	3300005921	Soil	MRVPSFPMIASFVLLAAPAFAQTSSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR*
Ga0070712_1002428052	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRVPAFATIASFVLLAAPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIRAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR*
Ga0070712_1010950922	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRVPSFPMIASFVLLAAPSFAQTSSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVTPDQMQAVIERTGSSSPPSDSTTR*
Ga0070765_1007785641	3300006176	Soil	MRVHALPTIASFVLLAAPALAQTSNITGGPLGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKILMEVSPDQMQAVIERTGSSSPPSESTTR*
Ga0070765_1013298311	3300006176	Soil	ASIVMLAAPALAQTASSGSSGSSSQLPPDTAVTVDTQQKLKQSLEQNGFKDVVVVPRAYAIRAQAPDGSKIVMEVGPDQMHAIIERTGGSSSTSGGSSR*
Ga0079222_110543512	3300006755	Agricultural Soil	MRVPAFATIASFVLLAAPALAQTSNMTGGQPGDNSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYVIHAQAPDGSKIVMEVSPDQMQAIIERSASSSPPSDGTTR*
Ga0066665_113276901	3300006796	Soil	TNDVAKLALSEHHHTCPRCRDNCVVVLLAAPALAQTSSMTGGQPGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVVVVPEAYVIHARAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR*
Ga0066659_103679861	3300006797	Soil	FVLFTVPALAQTSSMTGSQPSDPSTSSRLPPDTAVTLDTQQKLRESLEKSGFKNVAVVPVAYVIRAKAPDGSKIVMEVTPDAMQAVIERSGGSSQPPDSPSR*
Ga0066660_103341893	3300006800	Soil	MRVPAFATIASFVLLAAPALAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0079220_105736542	3300006806	Agricultural Soil	MRVPAFATIASFVLLAAPALAQTSNMTGGQPGDNSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYVIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0075424_1009173252	3300006904	Populus Rhizosphere	MRVPALPIVASLVLFAVPALAQTSNPTGGQLSDTSTSSRIPPDTAVTLDTQQKLKQSLEQSGFKNVVVVPEAFIIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPSSTGTT
Ga0099793_100637192	3300007258	Vadose Zone Soil	MSWDGCWQGTTNPEEHDMRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSESTTR*
Ga0099795_100257771	3300007788	Vadose Zone Soil	MSWDGCWQGTTNPEEHDMRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR*
Ga0099795_102928331	3300007788	Vadose Zone Soil	MECNMRVPAFATIASFVLLAAPALAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR*
Ga0099792_100024293	3300009143	Vadose Zone Soil	MRFPALPIIAAVVMLAPPAFAQTTSTTGSSRSDSPSTSSPQLPPDTAVTVDTQQKLKQSLEQNGFKNVIVVPEAYAIHAQAPDGSKIVMEVAPDQMRAVIERTGSSPPSSGSTSR*
Ga0099792_102098452	3300009143	Vadose Zone Soil	PALAQTSNMTGGQPGNTSTSSQVPPDTAVTLDTQQKLKQSLEQSGFKKVLVLPEAYVIHAQAPDGSKIVMEVTPDQMQAVIERSGSSSPPSDSTTR*
Ga0105243_126445401	3300009148	Miscanthus Rhizosphere	VINDFAERALTRYHHLEEHNMRVPALPIVASLVLFAVPALPQTSNPTGGQLSDTSTSSRIPPDTAVTLDTQQKLKQSLEQSGFKNVVVVPEAFIIHAQAPDGSKIVMEVSPDQMQAVIER
Ga0150983_151157231	3300011120	Forest Soil	MRFPALPIIASVVVLAAPALAQTSSMTSGSGGSAASSSQLPPDTAVTLDTQQKLKQSLEQNGFEDVVVVPRAYAIRAQAPDGSKILMEVGPDQMHAIIERTGSSPSTSGGSSR*
Ga0150983_161405142	3300011120	Forest Soil	RVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSSTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR*
Ga0137363_107865481	3300012202	Vadose Zone Soil	MSWDGCWQGTTNPEEHDMRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQVQAVIERTGSSSPPSDSTTR*
Ga0137399_101182101	3300012203	Vadose Zone Soil	MIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGTKIVMEVSPDQMQAVIERTGSSSPPSDSTTR*
Ga0137376_102383453	3300012208	Vadose Zone Soil	MRVPAFPIIASFALVAAPAFAQTSNMTGGRLSDDSTSSRLPPDTAVTLDTQQKLKQSLEQSGFKNVVVMPEAYIIHAKAPDGSKIVMEISPDQMQAVIERTGSSSQPS
Ga0137361_118940321	3300012362	Vadose Zone Soil	DVAKLALSEHLLTCPRCRDNCVVVLLAAPALAQTSSMTGGQPGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVVVVPEAYVIHARAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR*
Ga0137358_105330172	3300012582	Vadose Zone Soil	MRVPALPIVASLVLFAVPALAQTSNPTGGQLSDTPTSSRIPPDPAVTLDPQQKLQQSLEQSGFKNVIVVPEAFVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSQPGTTR*
Ga0137398_111862032	3300012683	Vadose Zone Soil	MRVPAFATIASFVLLAAPALAQTSNMTGGQPGNTSTSSQVPPDTAVTLDTQQKLKQSLEQSGFKKVLVLPEAYVIHAQAPDGSKIVMEVTPDQMQAVIERSGSSSTPSDSTT
Ga0137397_100139782	3300012685	Vadose Zone Soil	MRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQVQAVIERTGSSSPPSDSTTR*
Ga0137397_106052851	3300012685	Vadose Zone Soil	MRVPSFPMIASLALLAAPALAQTSGMTGGQLSDVSSSSRLPPDTVVTLDTQQKLKQSLEQNGFKNVVVVPEAYIVHAQAPDGSKIVMEVSPDRMQALIERTGSSSRPSEGTTR*
Ga0137395_102662722	3300012917	Vadose Zone Soil	MHFPALPIIASVVMLAAAPVLAQSTSTSGSSRNDTSPSSSQVPPDTAVTVDTQQKLKQSLEQNGFKNVLVVPEAYVIHAQAPDGSKIVMEVSPDQMRAVIERTGSSPPASGSNSR*
Ga0137396_101575562	3300012918	Vadose Zone Soil	MRVPSFLMIASFTLLAAPALAQTSGMTGGQLSDVSSSSRLPPDTIVTLDTQQKLKQSLEQNGFKNVVVVPEAYIVHAQAPDGSKIVMEVSPDRMQALIERTGSSSRPSEGTIR*
Ga0137394_104865862	3300012922	Vadose Zone Soil	MRVPAFPIVASFVLFTAPALAQTSSMTGSQPSDPSTSSHLPPDTAVTLDTQQKLRESLEKSGFKNVAVVPVAYVIRAKAPDGSKIVMEVTPDAMQAVIERSGGSSQPPDSPSR*
Ga0137413_115824211	3300012924	Vadose Zone Soil	AACCLHVTNLKECNMRVPAFATIASFVLLAAPALAQTSNMTAGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVLVLPEAYVIHAQAPDGSKIVMEVTPDQMQAVIERSGSSSPPSDSTTR*
Ga0137416_116937892	3300012927	Vadose Zone Soil	MIASFALLAAPALAQTSGMTGGQLSDVASSSRLPPDTVVTLDTQQKLKQSLEQNGFKNVVVVPEAYIVHAQAPDGSKIVMEVSPDRIQALIERTG
Ga0137410_103929311	3300012944	Vadose Zone Soil	MIASFVLLAAPALAQPSGMTGGQLSDAASSSRLPPDTVVTLDTQQKLKQSLEQNGFKNVVVVPEAYIVHAQAPDGSKIVMEVSPDRMQALIERTGSSSRPSEGTIR*
Ga0137409_102861581	3300015245	Vadose Zone Soil	MSVPSFPMIASFVLLAAPALAQPSGMTGGQLSDAASSSRLPPDTVVTLDTQQKLKQSLEQNGFKNVVVVPEAYIVHAQAPDGSKIVMEVSPDRMQALIERTGSSSRPSEGTIR*
Ga0066655_102792641	3300018431	Grasslands Soil	MRVPAFATIASFVLLAAPALSQTSNMTGGQPGDTATSSRVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYVIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR
Ga0066667_111190972	3300018433	Grasslands Soil	MRVPAFATIASFVLLAAPALAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYVIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR
Ga0066667_118235232	3300018433	Grasslands Soil	MRVPAFPIVASFVLFTVPALAQTSSMTGSQPSDPSTSSHLPPDTAVTLDTQSKLRESLEKNGFKNVAVVPVAYVIRAKAPDGSKIVMEVTPDAMQAVIERSGGSSQPPDSPSR
Ga0066662_110693721	3300018468	Grasslands Soil	MRVPAFATIASVVLLAAPAFAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYVIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSQPSGSTSR
Ga0066669_103738592	3300018482	Grasslands Soil	MRIPAFPIIASFALVAAPAFAQTSNMTGGRLSDDSTSSRLPPDTAVTLDTQQRLKQSLEQSSFKNVVVMPEACIIHAKAPDRLKIVMKISPDQIQAVIERTGSPSQPADSTTR
Ga0179592_101066621	3300020199	Vadose Zone Soil	MRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQVQAVIERTGSSSPPSDSTTR
Ga0210407_100495354	3300020579	Soil	MRVPSFPMIASFVLFAAPAFAQTTSITGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0210407_111259731	3300020579	Soil	MRVPALPTIASFILLAAPALAQTSTMTGGQLSDTSTSSRLPPDTAVTLDTQQKLKQSLEQNGFKKVVVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSTPPSDSTTR
Ga0210403_100629613	3300020580	Soil	MRVPALPTIASFVLLAAPALVQTSNITGGPLGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKILMEVSPD
Ga0210399_100988593	3300020581	Soil	MRVPSFPMIASFVLLAAPAFAQTSSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0210399_101294743	3300020581	Soil	MRVPALPTIASFVLLAAPALVQTSNITGGPLGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKILMEVSPDQMQAVIERTGSSSPPSESTTR
Ga0210401_100960011	3300020583	Soil	MRVPAFATIASFVLLAAPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQTCSIGDHCRGEQ
Ga0210401_101029673	3300020583	Soil	MRVPALPTIASFVLLAAPALAQTSNITGGPLGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSESTTR
Ga0210401_104867561	3300020583	Soil	MRTAALATIASFVLLATPVLAQTSNTTAGQPGDTSTSSQVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGTKIVMEVSPDQMQAVIERTGSSSPPSESTTR
Ga0210404_101847042	3300021088	Soil	MRVPSFPMIASFVLLAAPAFAQTSSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQALDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0210400_100495643	3300021170	Soil	MRVPALPTIASFILLAAPALAQTSTMTGGQLSDTSTSSRLPPDTAVTLDTQQKLKQSLEQNGFKKVVVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSTPPPDSTTR
Ga0210400_101719301	3300021170	Soil	MRVPAFATIASFVLLAAPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQT
Ga0210405_102771222	3300021171	Soil	MRVPAFATIASFVLLAAPAFAQTSTMAGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR
Ga0210405_104778472	3300021171	Soil	PALAQTSTMTGGQLSDTSTSSRLPPDTAVTLDTQQKLKQSLEQNGFKKVVVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSTPPSDSTTR
Ga0210408_103659341	3300021178	Soil	MRVPALPTIASFVLLAAPALAQTSNITGGPLGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKILMEVSPDQMQAVIERTGSSSPPSESTTR
Ga0179958_11527861	3300021315	Vadose Zone Soil	PKERNMRVPAFATIASFALLAAPALAQTSNMMSGQPSDTSTSARVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYIIHAQAPDGSKIVMEISPDQMQAVIERSGSSSPPSDSTTR
Ga0210389_100784814	3300021404	Soil	MRTAALATIASFVLLATPVLAQTSNTTAGQPGDTSTSSQVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGTKIVMEVSPDQMQAVIERTGSSSPPS
Ga0210389_101444531	3300021404	Soil	MRVPSFPMIASFVLFAAPAFAQTTSITGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVTPDQMQAVIERTGSSSPPSDSTAR
Ga0210387_109338131	3300021405	Soil	MRVPALPTIASFILLAAPALAQTSTMTGGQLSDTSTSSRLPPDTAVTLDTQQKLKQSLEQNGFKKVVVVPEAYVIHAQASDGSKIVMEVSPDQMQAVIERTGSSTPPSDSTTR
Ga0210387_115687261	3300021405	Soil	MRVPAFATIASFVLLAAPALAQTSNTTGNMTGGQQGDASPSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYVIHAQAPDGSKIVMEVSPDQMEAVIERTGSSSPPSNSTTR
Ga0210394_117763631	3300021420	Soil	MRVPSFPMIASFVLLAAPAFAQTSSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDS
Ga0210402_109038221	3300021478	Soil	ATNLQEHNMRVPAFATIASFVLLAAPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTT
Ga0210410_109400381	3300021479	Soil	MRVPSFPMIASFVLLAAPAFAQTSSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVTPDQMQAVIERTGSSSPPSDSTTR
Ga0210410_113081671	3300021479	Soil	PVLAQTSNTTAGQPGDTSTSSQVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGTKIVMEVSPDQMQAVIERTGSSSPPSESTTR
Ga0210409_103951901	3300021559	Soil	MRVPALPTIASFILLAAPALAQTSTMTGGQLSDTSTSSRLPPDTAVTLDTQQKLKQSLEQNGFKKVVVVPEAYVIHAQAPDGSKIVMEVSPDQMQA
Ga0242667_10510791	3300022513	Soil	HDMRVPSFPMIASFVLLAAPAFAQTSSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVTPDQMQAVIERTGSSSPPSDSTTR
Ga0242677_10411722	3300022713	Soil	HDMRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0242675_10477232	3300022718	Soil	MRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSSTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVTPDQMQAVI
Ga0179589_101401891	3300024288	Vadose Zone Soil	MRVPAFATIASFVLLAAPALAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR
Ga0179589_103930251	3300024288	Vadose Zone Soil	MRVPSFPMIASFVLLAAPTFAQTSSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0207692_104130662	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRVPALPIVASLVLFAVPALAQTSNMTGGQLSDTSTSSRIPPDTAVTLDTQQKLKQSLEQSGFKNVIVVPEAFIIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPSSTGTTR
Ga0207692_105593461	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRVPAFATIASFVLLAAPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIRAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR
Ga0257162_10233571	3300026340	Soil	MRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0257152_10289121	3300026369	Soil	QTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0257179_10609131	3300026371	Soil	DMRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGTKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0257159_10034893	3300026494	Soil	MSWDGCWQGTTNPEEHDMRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0257156_10362212	3300026498	Soil	MRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDRR
Ga0257161_10692301	3300026508	Soil	MRVPAFATIASFVLLAAPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQ
Ga0209474_101412092	3300026550	Soil	MRVPAFATIASVVLLAAPAFAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR
Ga0209577_107356991	3300026552	Soil	FAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVSPDQMQAIIERSGSSSPPSDSTTR
Ga0179593_12024154	3300026555	Vadose Zone Soil	MRVPTFPMIASFVLLAAPALAQTSGVTGGQLSDSTSSSRLPPDTVVTLDTQQKLKQSLEQNGFKNVVVVPEAYIVHAQARDGSKIVMEVSPDRMQALIERTGSSSRPSEGTIR
Ga0179587_109904202	3300026557	Vadose Zone Soil	LAQTSTMTGGQLSDTSTSSRLPPDTAVTLDTQQKLKQSLEQSGFKNVIVVPEAFVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSQPGTTR
Ga0208369_10279891	3300026998	Forest Soil	MRVHALPTIASFVLLAAPALAQTSNITGGPLGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERT
Ga0207949_10208411	3300026999	Forest Soil	MRVPAFATIASFVLLAVPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR
Ga0207949_10291542	3300026999	Forest Soil	MRVHALPTIASFVLLAAPALAQTSNITGGPLGDTSTSSRVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSESTTR
Ga0209179_10875801	3300027512	Vadose Zone Soil	MRVPAFATIASFVLLAAPALAQTSNMTGGQPGDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYIIHAQAPDGSKIVMEVTPDQMQAVIERSGSSSPPSDSTTR
Ga0209524_11282541	3300027521	Forest Soil	MRVPAFATIASFVLLAVPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDS
Ga0209419_10887612	3300027537	Forest Soil	FVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMRAVIERTGSSPSASGSTGR
Ga0209219_10222932	3300027565	Forest Soil	MRFPALPIIAAVVMLAAPALAQTASSGSSSSSSSQLPPDTAVTVDTQQKLKQSLEQNGFKDVVVVPRAYAIRAQAPDGSKIVMEVGPDQMHAIIERTGGSSSTSGGASR
Ga0209527_11093951	3300027583	Forest Soil	MRVPAFATIASFVLLAVPAFAQTSTMTGGQPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQNGFEDVVVVPRAYAIRAQAPDGSKILMEVGPDQMHAIIERTGSS
Ga0209528_10727992	3300027610	Forest Soil	MRFPALPIIASVVVLAAPALAQTSSMTSGSGGSAASSSQLPPDTAVTLDTQQKLKQSLEQNGFEDVVVVPRAYAIRAQAPDGSKILMEVGPDQMHAIIERTGSSPSTSGGSSR
Ga0209625_10061231	3300027635	Forest Soil	MRVPALPTIASFVLLAAPALAQTSNITGGPLGDTSTSLRVPPDTAVTLDTQQKLKQSLEQNGFKKVIVVPEAYVIHAQAPDGSKILMEVSPDQMQAVIERTG
Ga0209625_10079872	3300027635	Forest Soil	MSWDGCLQGTTNPEEHDMRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0209626_10207002	3300027684	Forest Soil	MRVPSFPMIASFVLFAAPAFAQTTSMTGGQLSDSPTSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR
Ga0209328_100293042	3300027727	Forest Soil	MRVPAFATIASFVLLAAPAFAQTSTMTGGLPSDTSTSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVVPEAYLIHAQAPDGSKIVMEVSPDQMQAVIERSGSSSPPSDSTTR
Ga0209488_100184243	3300027903	Vadose Zone Soil	MRVPAFATIASFVLLAAPALAQTSNMTGGQPSDTSTSSRVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYVIHAQAPDGSKIVMEVTPDQMQAVIERSGSSSPPSDSTTR
Ga0209526_100798782	3300028047	Forest Soil	MRFPALPIIAAVVMLAAPALAQTASSGSSSSSSSQLPPDTAVTVDTQQKLKQSLEQNGFKDVVVVPRAYAIRAQAPDGSKIVMEVGPDQMHAIIERTGGSSSTSGGSSR
Ga0209526_105636592	3300028047	Forest Soil	MRVPAFATIASFVLLAAPALAQTSNTTGNMTGGQQGDASPSSHVPPDTAVTLDTQQKLKQSLEQSGFKKVVVLPEAYVIHAQAPDGSKIVMEVSPDQMEAVIER
Ga0137415_103677571	3300028536	Vadose Zone Soil	MRVPSFPMIASFALLAAPALAQTSGMTGGQLSDVASSSRLPPDTVVTLDTQQKLKQSIEQNGFKNVIVVPEAYVIHAQAPDGTKIVMEVSPDQMQAVIERTGSSSPPSDSTTR
Ga0102757_111292821	3300030785	Soil	ALPTIASFILLAAPALAQTSTMTGGQLSDTSTSSRLPPDTAVTLDTQQKLKQSLEQNGFKKVVVVPEAYVIHAQAPDGSKIVMEVSPDQMQAVIERTGSSAPPSDSTTR
Ga0102757_111784591	3300030785	Soil	MRTPVLPLLASLVLLAMPAMAQTSGAPGGTSSQQPKDTVITLDTQQKLKQSLEQNGFKNVIVVPAAFVIHAQAPDGSNIMMEVSPDQMHAVIERTGSSSR
Ga0073994_122705062	3300030991	Soil	MHFPALPIIASVVMLAAAPVLAQSTSGSSRNDTSTSSSQVPPDTAVTVDTQQKLKQSLEQNGFKNVLVVPEAYVIHAQAPDGSKIVMEVSPDQMRAVIERTGSSPPASGSNSR
Ga0102760_109426291	3300031039	Soil	MRFLALPLVASLALAVPAVAQTTGATGSSQRNDASAASNQPKDTAVTVDTQQKLKQSLEQNGFKNVLVVPEAYIIHAQAPDGSKIVMEVSPDQMHAVIERTGSSSR
Ga0102760_109640131	3300031039	Soil	MRTPVLPLLASVVLLAVPAMAQTSGAPGGTSSQQPKDVVITLDTQQKLKQSLEQNGFKNVLVVPAAFVIHAQAPDGSNIMMEVSPDQMRAVIERTGSSSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069165

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences