Metagenome / Metatranscriptome Family F069178

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069178
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	58 residues
Representative Sequence	MERDSRRIAREWNREIEAEIRRLAARQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Number of Associated Samples	103
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.75 %
% of genes near scaffold ends (potentially truncated)	27.42 %
% of genes from short scaffolds (< 2000 bps)	77.42 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.452 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.806 % of family members)
Environment Ontology (ENVO)	Unclassified (39.516 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.613 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.52% β-sheet: 0.00% Coil/Unstructured: 34.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF08238	Sel1	30.65
PF02515	CoA_transf_3	16.13
PF00899	ThiF	11.29
PF06627	DUF1153	3.23
PF05494	MlaC	3.23
PF05237	Obsolete Pfam Family	2.42
PF00291	PALP	1.61
PF04127	DFP	1.61
PF01425	Amidase	1.61
PF00589	Phage_integrase	1.61
PF10397	ADSL_C	0.81
PF13437	HlyD_3	0.81
PF00692	dUTPase	0.81
PF06707	DUF1194	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	16.13
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	3.23
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.61
COG0452	Phosphopantothenoylcysteine synthetase/decarboxylase CoaBC	Coenzyme transport and metabolism [H]	1.61
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.81
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.45 %
Unclassified	root	N/A	18.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.45 %
Unclassified	root	N/A	18.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.45 %
Unclassified	root	N/A	18.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.84 %
Unclassified	root	N/A	18.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	69.35 %
Unclassified	root	N/A	18.55 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.23 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	43.55 %
Unclassified	root	N/A	18.55 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.84 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.42 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.55 %
Unclassified	root	N/A	18.55 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	2.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.42 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.55 %
Unclassified	root	N/A	18.55 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.42 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.55 %
Unclassified	root	N/A	18.55 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.42 %
Vibrio harveyi group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio harveyi group	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118436254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300003368\|JGI26340J50214_10162826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300003505\|JGIcombinedJ51221_10025688	All Organisms → cellular organisms → Bacteria → Proteobacteria	2106	Open in IMG/M
3300003505\|JGIcombinedJ51221_10027864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2035	Open in IMG/M
3300004082\|Ga0062384_100015765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3069	Open in IMG/M
3300004091\|Ga0062387_100911612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300004152\|Ga0062386_100049979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3145	Open in IMG/M
3300004635\|Ga0062388_102485533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300005175\|Ga0066673_10581985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300005176\|Ga0066679_10797408	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300005177\|Ga0066690_10029899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3157	Open in IMG/M
3300005178\|Ga0066688_10211466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1234	Open in IMG/M
3300005179\|Ga0066684_10076766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1991	Open in IMG/M
3300005184\|Ga0066671_10318405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	980	Open in IMG/M
3300005434\|Ga0070709_10024855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3531	Open in IMG/M
3300005434\|Ga0070709_10070004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2260	Open in IMG/M
3300005435\|Ga0070714_100115682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2380	Open in IMG/M
3300005436\|Ga0070713_100623580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1026	Open in IMG/M
3300005451\|Ga0066681_10254684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1066	Open in IMG/M
3300005454\|Ga0066687_10387590	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005552\|Ga0066701_10285073	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300005575\|Ga0066702_10228427	All Organisms → cellular organisms → Bacteria → Proteobacteria	1133	Open in IMG/M
3300005602\|Ga0070762_10036191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2669	Open in IMG/M
3300005712\|Ga0070764_10789819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300005764\|Ga0066903_100048823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5122	Open in IMG/M
3300005764\|Ga0066903_100498088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2063	Open in IMG/M
3300005764\|Ga0066903_107458531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300006175\|Ga0070712_100027101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3823	Open in IMG/M
3300006800\|Ga0066660_11048534	Not Available	651	Open in IMG/M
3300006893\|Ga0073928_10293457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1224	Open in IMG/M
3300006954\|Ga0079219_10138533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1276	Open in IMG/M
3300006954\|Ga0079219_10288011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1007	Open in IMG/M
3300009012\|Ga0066710_102183236	Not Available	809	Open in IMG/M
3300009792\|Ga0126374_11458626	Not Available	560	Open in IMG/M
3300010043\|Ga0126380_10066436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2025	Open in IMG/M
3300010046\|Ga0126384_10962317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300010048\|Ga0126373_12320760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300010159\|Ga0099796_10093989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1118	Open in IMG/M
3300010162\|Ga0131853_10110914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3964	Open in IMG/M
3300010361\|Ga0126378_11805180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300010361\|Ga0126378_11916454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300010376\|Ga0126381_101645957	Not Available	927	Open in IMG/M
3300010376\|Ga0126381_101826841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	877	Open in IMG/M
3300010376\|Ga0126381_103399837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300010398\|Ga0126383_12530136	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300011120\|Ga0150983_15100099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1277	Open in IMG/M
3300012199\|Ga0137383_11090894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300012212\|Ga0150985_107878650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300012582\|Ga0137358_10254578	Not Available	1195	Open in IMG/M
3300012923\|Ga0137359_11576840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300012958\|Ga0164299_10752685	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300015242\|Ga0137412_10171124	Not Available	1746	Open in IMG/M
3300016270\|Ga0182036_10330133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1169	Open in IMG/M
3300017970\|Ga0187783_10116650	All Organisms → cellular organisms → Bacteria → Proteobacteria	1968	Open in IMG/M
3300018468\|Ga0066662_10250912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1446	Open in IMG/M
3300018482\|Ga0066669_10832069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	820	Open in IMG/M
3300018482\|Ga0066669_11126671	Not Available	708	Open in IMG/M
3300018482\|Ga0066669_12173654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300020579\|Ga0210407_10466665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	987	Open in IMG/M
3300020580\|Ga0210403_10053750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3222	Open in IMG/M
3300020580\|Ga0210403_10112039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2216	Open in IMG/M
3300020580\|Ga0210403_10472247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1020	Open in IMG/M
3300020581\|Ga0210399_11057081	Not Available	651	Open in IMG/M
3300020581\|Ga0210399_11526430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300020582\|Ga0210395_10156301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1703	Open in IMG/M
3300020583\|Ga0210401_10671541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300021168\|Ga0210406_11112103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300021178\|Ga0210408_10151276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1838	Open in IMG/M
3300021178\|Ga0210408_11031806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300021178\|Ga0210408_11250108	Not Available	565	Open in IMG/M
3300021180\|Ga0210396_10251811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1570	Open in IMG/M
3300021181\|Ga0210388_10404717	Not Available	1200	Open in IMG/M
3300021377\|Ga0213874_10311216	Not Available	595	Open in IMG/M
3300021401\|Ga0210393_10435254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300021406\|Ga0210386_10596814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	954	Open in IMG/M
3300021420\|Ga0210394_11781025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300021432\|Ga0210384_10162436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2005	Open in IMG/M
3300021432\|Ga0210384_10933661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	768	Open in IMG/M
3300021478\|Ga0210402_10339197	Not Available	1393	Open in IMG/M
3300021478\|Ga0210402_11431518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300021478\|Ga0210402_11731546	Not Available	551	Open in IMG/M
3300021559\|Ga0210409_10641958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	931	Open in IMG/M
3300021560\|Ga0126371_10072929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3345	Open in IMG/M
3300021560\|Ga0126371_11173860	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300021560\|Ga0126371_13742687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300022507\|Ga0222729_1042783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300022533\|Ga0242662_10329544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300024347\|Ga0179591_1096603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2163	Open in IMG/M
3300026312\|Ga0209153_1110640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1037	Open in IMG/M
3300026330\|Ga0209473_1174449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	844	Open in IMG/M
3300026542\|Ga0209805_1050412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2075	Open in IMG/M
3300026551\|Ga0209648_10053123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3461	Open in IMG/M
3300026557\|Ga0179587_10652733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	693	Open in IMG/M
3300027069\|Ga0208859_1014470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	881	Open in IMG/M
3300027172\|Ga0208098_1038229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300027297\|Ga0208241_1048186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300027635\|Ga0209625_1107069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300027701\|Ga0209447_10041450	Not Available	1273	Open in IMG/M
3300027727\|Ga0209328_10272072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300027737\|Ga0209038_10097109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300027812\|Ga0209656_10004934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8580	Open in IMG/M
3300027812\|Ga0209656_10088734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1646	Open in IMG/M
3300027824\|Ga0209040_10133796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1359	Open in IMG/M
3300027829\|Ga0209773_10054977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1611	Open in IMG/M
3300027855\|Ga0209693_10058107	Not Available	1903	Open in IMG/M
3300027884\|Ga0209275_10103307	Not Available	1461	Open in IMG/M
3300027903\|Ga0209488_10494891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300028906\|Ga0308309_10955152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300031231\|Ga0170824_120358250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	733	Open in IMG/M
3300031446\|Ga0170820_13184257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1001	Open in IMG/M
3300031543\|Ga0318516_10001064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10019	Open in IMG/M
3300031544\|Ga0318534_10014443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4056	Open in IMG/M
3300031561\|Ga0318528_10435861	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300031708\|Ga0310686_112397031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300031753\|Ga0307477_10599330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300031781\|Ga0318547_10982755	Not Available	527	Open in IMG/M
3300031846\|Ga0318512_10001292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7586	Open in IMG/M
3300031910\|Ga0306923_10208519	Not Available	2235	Open in IMG/M
3300031954\|Ga0306926_12432352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio harveyi group	576	Open in IMG/M
3300032054\|Ga0318570_10477046	Not Available	569	Open in IMG/M
3300032089\|Ga0318525_10213682	Not Available	991	Open in IMG/M
3300032261\|Ga0306920_101013742	Not Available	1208	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.77%
Host-Associated	Host-Associated	3.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.10%
Aquatic	Environmental → Aquatic	9.68%
Plants	Host-Associated → Plants	2.42%
Arthropoda	Host-Associated → Arthropoda	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.10%
Freshwater	Environmental → Aquatic → Freshwater	8.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.74%
Loam	Environmental → Terrestrial → Soil → Loam	18.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.61%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.61%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.61%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1184362541	3300002568	Soil	MERDSSRIAREWNREIETEISRLAARQDEGWGRVVVWTVLELVWLVAIFAMLGVFSRLH*
JGI26340J50214_101628261	3300003368	Bog Forest Soil	MERDSKRIVREWNREIEAEICRLASRQNDGKWKYVVWAVLEVIWLVAVFAMLGVFSRLH*
JGIcombinedJ51221_100256883	3300003505	Forest Soil	MERESRRIAREWNREIEAEIRRLAARQEEGWGRVVVLAVLELVWLVAVFVVLGVFSRLH*
JGIcombinedJ51221_100278642	3300003505	Forest Soil	MERDSGRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH*
Ga0062384_1000157652	3300004082	Bog Forest Soil	MERDSKRIAREWNREIEAELRRFAARRDEGWGRGVVWTVLELVWLVAVFAVLGLFSRLH*
Ga0062387_1009116121	3300004091	Bog Forest Soil	MERDSRRIAREWNREIEAEIRRLAARRDDGWGRVVIWTVLELVWLLAVFAVLGVFSRLH*
Ga0062386_1000499792	3300004152	Bog Forest Soil	MERDSKRIATEWNREIEAEIRRLSNRRDDGWGRVVVWTVLEVFWIFGVFAVLGLFSRLN*
Ga0062388_1024855331	3300004635	Bog Forest Soil	AAIGILFMERDSKRIAREWNREIEAEMRRLAAGQDDGKWKVVVWTVLELIWLVAVFAVLGVFSRLH*
Ga0066673_105819851	3300005175	Soil	SRRIAREWNREIEAEIRRRLAAKQEYGWGRVVVWTVLELVWLVAVFVVLGVFSRLH*
Ga0066679_107974081	3300005176	Soil	MERESRRIAREWNREIEAEIRRRAARRDDGWGRFVVWAVLELVWLVAVFAVLGVFSRLH*
Ga0066690_100298992	3300005177	Soil	MERDSRRIAREWNREIEAEIRRRAARRDDGWGRFVVWAVLELVWLVAVFAVLGVFSRLH*
Ga0066688_102114662	3300005178	Soil	MERDSRRIAREWNREIEAEIRRRAARRDDGWGRFVVWAVLELVWLVAVFAVLGVLSRLH*
Ga0066684_100767662	3300005179	Soil	MEGDSRRIAREWNREIEAEIRRRAARRDDGWGRFVVWAVLELVWLVAVFAVLGVFSRLH*
Ga0066671_103184052	3300005184	Soil	MERDSKRIVREWDLEIEAEIRRLTAQQDGGKWNIVVWTVLEAIWLVAVFAVLGLFSRLH*
Ga0070709_100248553	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MERDSKRIASEWNREIEAEIRRLDARQEDGWGRVVVLTLLEVIWLVAVFAVLGLFSRLH*
Ga0070709_100700042	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MERDSRRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLLAVFAVLGVFSRLH*
Ga0070714_1001156821	3300005435	Agricultural Soil	DSKRIASEWNREIEAEIRRLDARQEDGWGRVVVLTLLEVIWLVAVFAVLGLFSRLH*
Ga0070713_1006235802	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MERDSRRIAREWNREIETEISRLAARQDEGWGRVVIWTVLELVWLVAIFAVLGVFSRLH*
Ga0066681_102546843	3300005451	Soil	MERDSRRIAREWNREIEAEIRRLAARRDEGWSRVVVWTVLKLVWLVAVFAVLGVFSRLH*
Ga0066687_103875902	3300005454	Soil	MEGDSRRIAREWNREIEAEIRRRAARRDDGWGRFVVWAVLELVWLVAVFAVLGVLSRLH*
Ga0066701_102850732	3300005552	Soil	MERDSKRIVREWNREIEAEIRRLAARQDDGKWKYVVWTVLEVIWLVAVFAVLGVFSRLH*
Ga0066702_102284272	3300005575	Soil	MEGNSRRIAREWNREIEAEIRRRAARRDDGWGRFVVWAVLELVWLVAVFAVLGVFSRLH*
Ga0070762_100361912	3300005602	Soil	MERDSRRIAREWNREIEAEIRRLAARQDEGWGRVVVWTVLEVVWLVAVFAVLGVFSRLD*
Ga0070764_107898191	3300005712	Soil	WAAMERDSGRIAREWNREIEAENRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH*
Ga0066903_1000488235	3300005764	Tropical Forest Soil	MERDSKRIAREWTREIEADIHRLAARRDEGWGRVVVWTLLEVVWIFGVFAVLGLFSRLN*
Ga0066903_1004980882	3300005764	Tropical Forest Soil	MERDSKRIAREWNREIEADIRRLAASRDDGKWSIVVRTVLEVMWLFGVIGILGVFARLYR
Ga0066903_1074585312	3300005764	Tropical Forest Soil	ADIIEVGAAMEHDSKRIVREWNREIEVEDRHLAARQDGWGKIVVWTVLELMWLVAVFAVLGLVSRLY*
Ga0070712_1000271011	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MERDSRRIAREWNREIETEISRLAARRDEGWGRVVIWTVLELVWLVAIFAVLGVFSRLH*
Ga0066660_110485341	3300006800	Soil	MERDSRRIAREWNREIEAEIRRLAAPRDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH*
Ga0073928_102934572	3300006893	Iron-Sulfur Acid Spring	MAAMERESRRIAREWNREIEAEIRRLAARQEEDWGRVVVWVVLELVWLVAVFVVLGVFSRLH*
Ga0079219_101385332	3300006954	Agricultural Soil	MERYSKRIAQEWNREIEAEIRRLAAQRDDGWGRVVVWTVLELVWLVAIFAVLGVLSRLH*
Ga0079219_102880112	3300006954	Agricultural Soil	MERNSRRIAREWNREIETEIRRLAARQDQGWGRAVVWTVLELVWLVAIFAVLGVFSRLH*
Ga0066710_1021832361	3300009012	Grasslands Soil	MERDSKRIAREWNRAIEAEIRRLAARRDEGWGRVVVWTVLEVIWLAGLVAVLGLFTRLYW
Ga0126374_114586261	3300009792	Tropical Forest Soil	MERDSKRIASEWNREIEAEIRRLAAQRDDGWGRAVVWTALEMAWLVAVFAVMGVFGRLH
Ga0126380_100664362	3300010043	Tropical Forest Soil	MERDSKRIASEWNREIEAEIRRLAAQRDDGWGRAVVWTVLEMAWLVAVFAVMGVFGRLH*
Ga0126384_109623171	3300010046	Tropical Forest Soil	MEHDSKRVVREWNREIEVEDRHRAAVRDGGWGKVVVWTVLEVMWLVAVFA
Ga0126373_123207602	3300010048	Tropical Forest Soil	DSKRIVREWNREIEVEDRHLASARQEGWGKIVVWTVLELMWLVAVFAVLGLVSRLY*
Ga0099796_100939892	3300010159	Vadose Zone Soil	MERDSRRIAREWNREIETEIRRLAARQDQGWGRAVVWTVLELVWLVAIFAVLGVFSRLH*
Ga0131853_101109142	3300010162	Termite Gut	MEHDSKRIVREWNREIESEIRRFAAHQQDRWGKILIWTVLEVVWLVAVFAVLGLVSRLH*
Ga0126378_118051802	3300010361	Tropical Forest Soil	MEHDSKRVVREWNREIEVEDRHRAAARDGGWGKVVVWTVLEVMWLVAVFAVLGLVSRLQ*
Ga0126378_119164542	3300010361	Tropical Forest Soil	MEHDSKRIVREWNREIEVEDRHLAAAREDGWGKIVVWTVLELMWLVAVFAVLGLVSRLY*
Ga0126381_1016459572	3300010376	Tropical Forest Soil	MERYSKRIAQEWNREIEAEIRRLAAQRDNGWGRVVVWTVLEMAWLLAVFLVMGVFGRLH*
Ga0126381_1018268411	3300010376	Tropical Forest Soil	MEHDSKRVVREWNREIEVEDRHRAAVRDGGWGKVVVWTVLEVMWLVAVFAVLGLVSRLQ*
Ga0126381_1033998371	3300010376	Tropical Forest Soil	AANIVEVGDAMEHDSKRIVREWNREIEVEDRHLASARQEGWGKIVVWTVLELMWLVAVFAVLGLVSRLY*
Ga0126383_125301361	3300010398	Tropical Forest Soil	MEHDSKRVVREWNREIEVEDRHRAAARDGRWGKVVVWTVLEVMWLVAVFAVLGLVSRLQ*
Ga0150983_151000991	3300011120	Forest Soil	MERDSRRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH*
Ga0137383_110908942	3300012199	Vadose Zone Soil	REWNREIEAEIRRLAARQDDGKWKYVVWTVLEVIWLVAIFAVLGVFSRLH*
Ga0150985_1078786503	3300012212	Avena Fatua Rhizosphere	VMERDSRRIAREWNREIETEIRRLAARQDEGWGRVVVWTVLELVWLVAIFAVLGVFSRLH
Ga0137370_106990691	3300012285	Vadose Zone Soil	IVRPARDRSSVERHSKRIVREWDREIEAELRRLAAQQDGGKWKVVVWAVLEAIWLVTVFAVLALFSRLN*
Ga0137358_102545782	3300012582	Vadose Zone Soil	MERDSRRIAREWNREIEAEIRRLAVGQDEGWGRVVVWTVLELVWLVAVFAALGVFSRLH*
Ga0137359_115768401	3300012923	Vadose Zone Soil	ERDSKRIVREWNREIEAEIRRRTARRDDGWGRIVVWTVLEVVWLLAVFAVLGVFSRLH*
Ga0164299_107526852	3300012958	Soil	MERDSKRIASEWNREIQAEIRRLDTRQEDGWGRVVVLTLLEVIWLVAVFAVLGLFSRLH*
Ga0137412_101711242	3300015242	Vadose Zone Soil	MERDSRRIAREWNREIETEISRLAARQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLR*
Ga0132258_116686271	3300015371	Arabidopsis Rhizosphere	VERDSKRIVREWDREIEAELRRLAAQQDGGKWKIVVWTMLEAIWLVTVFAVLALFSRLH*
Ga0182036_103301331	3300016270	Soil	VERDSRRIAREWNREIEAEIRRLAARRDEGWGRVVVWAVLELVWLVAVFVVLGVFSRLY
Ga0187783_101166502	3300017970	Tropical Peatland	LRRFGPDDNVVIAVEPDPRRIAREWNREIEAETRRLAARQDKGWGRIVVWTALAGLWFVGLVAFLGLFKRLQW
Ga0066662_102509122	3300018468	Grasslands Soil	MERDSRRIAREWNREIEAEIRRRAARRDDGWGRFVVWAVLELVWLVAVFAVLGVFSRLH
Ga0066669_108320692	3300018482	Grasslands Soil	MERDSRRIVREWNREIEAEIRRRAAQRDKGWGRVVVWTVMELVWLVAVFAVLGVFSRLH
Ga0066669_111266711	3300018482	Grasslands Soil	MERDSRRIAREWNREIEAEIRRRAARRDDGWGRFVVWAVLELVWLVAVFAVLGVLSRLH
Ga0066669_121736542	3300018482	Grasslands Soil	MERESRRIAREWNREIEAEIRRLAARHDEGWGRVVVWTVLELVWLVGVFAVLGVFSRLH
Ga0210407_104666652	3300020579	Soil	MERESRRIAQEWNREIEAEIRRLAARQDEGWGRVVVWTVLELVWVLAVFAVLGVFSRLH
Ga0210403_100537503	3300020580	Soil	MERESRRIAREWNREIEAEIRRLAARQEEGWGRVVVWAVLELVWLVAVFVVLGVFSRLH
Ga0210403_101120391	3300020580	Soil	WNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0210403_104722472	3300020580	Soil	REWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWVVAVFAVLGVFSRLH
Ga0210399_110570812	3300020581	Soil	MERDSKRIASEWNREIQAEIRRLDARQEDGWGRVVVLTLLEVIWLVAVFAVLGLFSRLH
Ga0210399_115264302	3300020581	Soil	MERDSRRIAREWNREIEADIRRLAARRDEGWGRVVIWTVLELVWLVAVFAVLGVFSRLH
Ga0210395_101563012	3300020582	Soil	MERDSRRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0210401_106715412	3300020583	Soil	MERDSRRIAREWNREIEAEIRRLAARQDEGWGRVVVWTVLEVVWLVAVFAVLGVFSRLD
Ga0210406_111121032	3300021168	Soil	MERDSRRIAREWNREIEADIRRLAARRDEGWGRVVIWTVLELVCLVAVFAVLGVFSRLH
Ga0210408_101512764	3300021178	Soil	SRRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLLAVFAVLGVFSRLH
Ga0210408_110318062	3300021178	Soil	MERDSRRIAREWNREIEADIRRLAARRDEGWGRVVIWTLLELVWLVAVFAVLGVFSRLH
Ga0210408_112501082	3300021178	Soil	MERESRRIAQEWNREIEAEIRRLAARQDEGWGRVVVWTVLELVWVLAVF
Ga0210396_102518112	3300021180	Soil	MERESRRIAREWNREIEAEIRRLAARQEEGWGRVVVLAVLELVWLVAVFVVLGVFSRLH
Ga0210388_104047171	3300021181	Soil	MERDSRRIAREWNREIEADIRRLAARRDEGWGRVVIWTVLELVWLVAVFAVLGVFS
Ga0213874_103112162	3300021377	Plant Roots	MERDSRRIAREWNREIEAEIRRFAARHDEGWGRVLVWTVLELVWLVAVFAVLGVFTRLH
Ga0210393_104352542	3300021401	Soil	REWNREIEAEIRRIAARRDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0210386_105968143	3300021406	Soil	MERDSRRIAREWNREIEAEIRRLAARRDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLY
Ga0210394_117810252	3300021420	Soil	MERDSKRIASEWNREIQAEIRRLDTRQEDGWGRVVVLTLLEVIWLVAVFAVLGLFSRLH
Ga0210384_101624361	3300021432	Soil	EWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0210384_109336611	3300021432	Soil	MERDSGRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0210402_103391971	3300021478	Soil	MERDSRRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSR
Ga0210402_114315182	3300021478	Soil	RRIAQEWNREIEAEIRRLAARQDEGWGRVVVWTVLELVWVLAVFAVLGVFSRLH
Ga0210402_117315461	3300021478	Soil	MERDSKRIASEWNREIQAEIRRLDARQEDGWGRVVVLTLLEVIWLVAVFAVLGLF
Ga0210409_106419582	3300021559	Soil	IARKWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0126371_100729293	3300021560	Tropical Forest Soil	MERDSKRIAREWNREIEADIRRRAASRDDGKWSIVVWTVLEVMWLFGVIGILGVFARLYR
Ga0126371_111738602	3300021560	Tropical Forest Soil	MERDSKRIVREWNQEIESELRRLAARRDGGWGKLVIWTVLGLIWLTAVFVALAMLSRLH
Ga0126371_137426871	3300021560	Tropical Forest Soil	AMEHDSKRIVREWNREIEVEDRRLAFARQEGWGKIVIWTVLEVMWLVAVFAVLGLVSRLY
Ga0222729_10427831	3300022507	Soil	MERDSRRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLEMVWLVAVFAVLGVFSRLD
Ga0242662_103295441	3300022533	Soil	MERDSRRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWVVAVFAVLGVFSRLH
Ga0179591_10966032	3300024347	Vadose Zone Soil	MERDSRRIAREWNREIETEISRLAARQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0209153_11106401	3300026312	Soil	MEGDSRRIAREWNREIEAEIRRRAARRDDGWGRFVVWAVLELVWLVAVFAVLGVFSRLH
Ga0209473_11744492	3300026330	Soil	MEGDSRRIAREWNREIEAEIRRRAARRDDGWGRFVVWAVLELVWLVAVFAVLGVLSRLH
Ga0209805_10504123	3300026542	Soil	MERDSKRIVREWDLEIEAEIRRLTAQQDGGKWNIVVWTVLEAIWLVAVFAVLGLFSRLH
Ga0209648_100531233	3300026551	Grasslands Soil	MERDSRRIAREWNREIEAEIRRLAARQDEGWGRVVVWTVLELVWLVAVFVVLGVFSRLH
Ga0179587_106527332	3300026557	Vadose Zone Soil	MERDSRRIAREWNREIEAEIRRLAARQDEGWGRVVVWTVLELVWLVAV
Ga0208859_10144701	3300027069	Forest Soil	MERDSGRIAREWNREIEAEIRRLAVRQDEGWGRVVVGTVLELVWLVAVFAVLGVFSRLH
Ga0208098_10382291	3300027172	Forest Soil	MERDSRRIAREWNREIEAEIRRLAARQEEGWGRVVVLAVLELVWLVAVFVVLGVFSRLH
Ga0208241_10481862	3300027297	Forest Soil	MERDSGRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVF
Ga0209625_11070691	3300027635	Forest Soil	MERDSRRIAREWNREIEAEIRRLAARQDEGWGRVVVWTVLEVVWLVAVFTVLGVFSRLH
Ga0209447_100414502	3300027701	Bog Forest Soil	MERDSRRIAQEWNREIEAEIRRLAARYDEGWGRAVVWTVLELVWLVAVFAVLGIFSRLH
Ga0209328_102720721	3300027727	Forest Soil	MERDSRRIAREWNREIEAEIRRLAARRDEGWGRVVVWMVLELVWLVAVFAVLGVFSRLH
Ga0209038_100971092	3300027737	Bog Forest Soil	MERDSKRIAREWNREIESELRRLAARRDEGWARVVVWTVLELVWLVAVFAVLGLFSRLH
Ga0209656_100049342	3300027812	Bog Forest Soil	MERDSKRIVREWNREIEAEICRLASRQNDGKWKYVVWAVLEVIWLVAVFAMLGVFSRLH
Ga0209656_100887341	3300027812	Bog Forest Soil	IATEWNREIEAEIRRLSNRRDDGWGRVVVWTVLEVFWIFGVFAVLGLFSRLN
Ga0209040_101337963	3300027824	Bog Forest Soil	MERDSKRIATEWNREIEAEIRRLSNRRDDGWGRVVVWTVLEVFWIFGVFAVLGLFSRLN
Ga0209773_100549772	3300027829	Bog Forest Soil	MERDSKRIAREWNREIEAELRRFAARRDEGWGRGVVWTVLELVWLVAVFAVLGLFSRLH
Ga0209693_100581073	3300027855	Soil	LHIWAAMERDSGRIAREWNREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0209275_101033071	3300027884	Soil	MERDSRRIAREWNREIEAEIRRLAARQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0209488_104948911	3300027903	Vadose Zone Soil	WNREMEAEIRRLAVRQDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0308309_109551521	3300028906	Soil	MERDSRRIAREWNREIEAEIRRLAARQDEGWGRVVVWTVLEVVWLVAVFTVLGVFSRLD
Ga0170824_1203582501	3300031231	Forest Soil	MERDSRRIAREWDREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLMAVFAVLGVFSRLH
Ga0170820_131842571	3300031446	Forest Soil	MERDSRRIAREWDREIEAEIRRLAVRQDEGWGRVVVWTVLELVWLLAVFAVLGVFSRLH
Ga0318516_1000106410	3300031543	Soil	MEHNSKRIVREWNREIEVEDRHRAAAREDGCGKIVVWTALEIMWLVAVFAVLGLVSRLY
Ga0318534_100144433	3300031544	Soil	MRHDSKRIVREWNREIEVEDRHRAAAREDGCGKIVVWTALEIMWLVAVFAVLGLVSRLY
Ga0318528_104358612	3300031561	Soil	MERESRRIAREWYREIEGEIRRLAARQEEGWGRVVVWAVLELVWLVAVFVVLGVFSRLY
Ga0310686_1123970311	3300031708	Soil	MERDSRRIAREWNREIEAEIRRLAARRDEGWGRVVVWTVLELVWLVAVFAVLGVFSRLH
Ga0307477_105993302	3300031753	Hardwood Forest Soil	ERESRRIAREWNREIEAEIRRLAARQEEGWGRVVVLAVLELVWLVAVFVVLGVFSRLH
Ga0318547_109827551	3300031781	Soil	MERESRRIAREWNREIEGEIRRLAARQEEGWGRVVVWAVLELVWLVAVFV
Ga0318512_100012924	3300031846	Soil	MEHNSKRIVREWNREIAAEDHRLAAARQHGWGKIVVWTVLEVMWLVAVFAVLGLVSRLY
Ga0306923_102085193	3300031910	Soil	MEHDSKRVVREWNREIEVEDRHRASARDGGWGKVVVWTVLEVMWLVAVFAVLGLVSRLQ
Ga0306926_124323522	3300031954	Soil	MERDSRRIAREWNREIEAEIRRLAARRDEGWGRVVVWTVLELVWLVAVFAVLGVFNRLY
Ga0318570_104770461	3300032054	Soil	MERESRRIAREWNREIEGEIRRLAARQEEGWGRVVVWAVLELVWLVAVFVVLGVFSRLY
Ga0318525_102136822	3300032089	Soil	MEHNSKRIVREWNREIEVEDRHRAAAREDDCGKIVVWTALEIMWLVAVFAVLGLVSRLY
Ga0306920_1010137421	3300032261	Soil	MEHDSKRVVREWNREIEVEDRHRASARDGGWGKVVVWTVLEVMWLVAVFAVLGLVS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069178

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences