Metagenome Family F069276

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069276
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	107 residues
Representative Sequence	MDAKFQPAIEAVKSGDLENFKALVAADPSLATTRSSKSHPTLLQCVALDGKDKPNNVEMAGVLIEAGAELNEPLIAAGSIDNRAVAELLLDRGAAIDGTSGWSPLE
Number of Associated Samples	101
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.03 %
% of genes near scaffold ends (potentially truncated)	94.35 %
% of genes from short scaffolds (< 2000 bps)	92.74 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.161 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (8.064 % of family members)
Environment Ontology (ENVO)	Unclassified (51.613 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.968 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.27% β-sheet: 1.49% Coil/Unstructured: 52.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.84
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.84
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.211.1.0: automated matches	d3b95a1	3b95	0.78477
d.211.1.1: Ankyrin repeat	d2f8ya_	2f8y	0.77346
d.211.1.0: automated matches	d5y4fa_	5y4f	0.76752
d.211.1.0: automated matches	d2b0oe2	2b0o	0.76008
d.211.1.0: automated matches	d4hi8a_	4hi8	0.75917

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00072	Response_reg	24.19
PF12796	Ank_2	15.32
PF07883	Cupin_2	8.87
PF09720	Unstab_antitox	2.42
PF01464	SLT	2.42
PF05163	DinB	1.61
PF00561	Abhydrolase_1	1.61
PF10049	DUF2283	0.81
PF00343	Phosphorylase	0.81
PF13637	Ank_4	0.81
PF08281	Sigma70_r4_2	0.81
PF07676	PD40	0.81
PF13185	GAF_2	0.81
PF01565	FAD_binding_4	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.61
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.65 %
Unclassified	root	N/A	4.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.23 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	14.52 %
Unclassified	root	N/A	4.84 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.23 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.84 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	3.23 %
Fimbriimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.23 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Fimbriimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales	0.81 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.81 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.23 %
Fimbriimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae	0.81 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.23 %
Fimbriimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas	0.81 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.23 %
Fimbriimonas ginsengisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli	0.81 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.23 %
Rhizobium sp. NFIX01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. NFIX01	0.81 %
Fimbriimonas ginsengisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459000\|T1_contig00709	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13078345	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105848350	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300000559\|F14TC_110337946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	644	Open in IMG/M
3300000789\|JGI1027J11758_12889437	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300000956\|JGI10216J12902_109848058	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300001431\|F14TB_106829616	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300002899\|JGIcombinedJ43975_10091699	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300002914\|JGI25617J43924_10071217	All Organisms → cellular organisms → Bacteria → Acidobacteria	1271	Open in IMG/M
3300005093\|Ga0062594_101121334	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300005171\|Ga0066677_10205512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1104	Open in IMG/M
3300005290\|Ga0065712_10110708	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300005294\|Ga0065705_10648528	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005332\|Ga0066388_104259553	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300005340\|Ga0070689_101087906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	714	Open in IMG/M
3300005355\|Ga0070671_100446048	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300005364\|Ga0070673_100240297	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300005364\|Ga0070673_100851990	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300005438\|Ga0070701_11081706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300005440\|Ga0070705_100871640	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300005441\|Ga0070700_101518000	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005518\|Ga0070699_101341724	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005526\|Ga0073909_10449648	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005549\|Ga0070704_101800476	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005564\|Ga0070664_100187252	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300005564\|Ga0070664_100756301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	907	Open in IMG/M
3300005564\|Ga0070664_101888789	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300005577\|Ga0068857_101590326	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300005577\|Ga0068857_102373422	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300005614\|Ga0068856_101092513	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300005615\|Ga0070702_100731441	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005618\|Ga0068864_101168412	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005618\|Ga0068864_102450255	Not Available	528	Open in IMG/M
3300005764\|Ga0066903_104734576	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005841\|Ga0068863_101574805	Not Available	666	Open in IMG/M
3300005843\|Ga0068860_100163791	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300006173\|Ga0070716_100060415	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300006173\|Ga0070716_101818373	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300006755\|Ga0079222_12084624	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300006796\|Ga0066665_11266826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Fimbriimonadia → Fimbriimonadales → Fimbriimonadaceae → Fimbriimonas → Fimbriimonas ginsengisoli	565	Open in IMG/M
3300006852\|Ga0075433_11331298	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300006852\|Ga0075433_11767675	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300006854\|Ga0075425_102100652	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300006854\|Ga0075425_103006445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. NFIX01	515	Open in IMG/M
3300006881\|Ga0068865_100701576	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300007004\|Ga0079218_13680442	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300007076\|Ga0075435_101248144	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300007258\|Ga0099793_10728682	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300009090\|Ga0099827_11378384	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300009093\|Ga0105240_10895832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	955	Open in IMG/M
3300009101\|Ga0105247_11245387	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300009162\|Ga0075423_10022033	All Organisms → cellular organisms → Bacteria	6337	Open in IMG/M
3300009162\|Ga0075423_10189173	All Organisms → cellular organisms → Bacteria	2160	Open in IMG/M
3300009162\|Ga0075423_10307765	All Organisms → cellular organisms → Bacteria → Acidobacteria	1661	Open in IMG/M
3300009162\|Ga0075423_11350249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	762	Open in IMG/M
3300009174\|Ga0105241_10543119	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M
3300009174\|Ga0105241_12673536	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300009176\|Ga0105242_11320325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300009177\|Ga0105248_13112403	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300009792\|Ga0126374_10667319	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300010038\|Ga0126315_10213543	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300010038\|Ga0126315_10710103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	657	Open in IMG/M
3300010047\|Ga0126382_12355745	Not Available	516	Open in IMG/M
3300010375\|Ga0105239_12639440	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300010397\|Ga0134124_12861389	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300010400\|Ga0134122_10950344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	837	Open in IMG/M
3300010401\|Ga0134121_10373224	All Organisms → cellular organisms → Bacteria → Acidobacteria	1282	Open in IMG/M
3300010401\|Ga0134121_10872607	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300010403\|Ga0134123_10459086	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300011271\|Ga0137393_11249978	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300012199\|Ga0137383_10565756	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300012209\|Ga0137379_10185190	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300012356\|Ga0137371_10050437	All Organisms → cellular organisms → Bacteria	3217	Open in IMG/M
3300012359\|Ga0137385_10313390	All Organisms → cellular organisms → Bacteria → Proteobacteria	1348	Open in IMG/M
3300012362\|Ga0137361_10057984	All Organisms → cellular organisms → Bacteria	3225	Open in IMG/M
3300012501\|Ga0157351_1050174	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300013100\|Ga0157373_11163781	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300013100\|Ga0157373_11286053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	553	Open in IMG/M
3300013307\|Ga0157372_12950435	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300013307\|Ga0157372_13155386	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300013760\|Ga0120188_1006206	All Organisms → cellular organisms → Bacteria → Acidobacteria	968	Open in IMG/M
3300013760\|Ga0120188_1018139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	712	Open in IMG/M
3300014302\|Ga0075310_1152924	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300014326\|Ga0157380_12162431	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	620	Open in IMG/M
3300014965\|Ga0120193_10029158	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300015372\|Ga0132256_100289279	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300015372\|Ga0132256_101464283	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300015372\|Ga0132256_103117674	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300015374\|Ga0132255_101302370	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300015374\|Ga0132255_102958628	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300017792\|Ga0163161_12056391	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300018054\|Ga0184621_10242417	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300018422\|Ga0190265_10740571	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300018481\|Ga0190271_11469442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	799	Open in IMG/M
3300025899\|Ga0207642_11042415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	527	Open in IMG/M
3300025900\|Ga0207710_10195700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	997	Open in IMG/M
3300025901\|Ga0207688_10516937	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	749	Open in IMG/M
3300025908\|Ga0207643_10536172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	750	Open in IMG/M
3300025911\|Ga0207654_10333253	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300025919\|Ga0207657_11483589	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300025933\|Ga0207706_10117083	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300025934\|Ga0207686_10522512	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300025936\|Ga0207670_10453179	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1035	Open in IMG/M
3300025938\|Ga0207704_11728144	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	538	Open in IMG/M
3300025939\|Ga0207665_10276216	All Organisms → cellular organisms → Bacteria → Acidobacteria	1249	Open in IMG/M
3300025941\|Ga0207711_11111379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	731	Open in IMG/M
3300025945\|Ga0207679_12111871	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300026035\|Ga0207703_10462947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1186	Open in IMG/M
3300026041\|Ga0207639_10507638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1102	Open in IMG/M
3300026041\|Ga0207639_12293215	Not Available	501	Open in IMG/M
3300026088\|Ga0207641_10608902	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300026095\|Ga0207676_10346858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1372	Open in IMG/M
3300026095\|Ga0207676_12055761	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300026116\|Ga0207674_10156883	All Organisms → cellular organisms → Bacteria	2231	Open in IMG/M
3300026116\|Ga0207674_10839199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	886	Open in IMG/M
3300026118\|Ga0207675_102336439	Not Available	548	Open in IMG/M
3300026142\|Ga0207698_10425277	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300026551\|Ga0209648_10637806	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300027266\|Ga0209215_1006195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	1393	Open in IMG/M
3300027326\|Ga0209731_1077914	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300027909\|Ga0209382_11188206	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300031716\|Ga0310813_12236681	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300032003\|Ga0310897_10050190	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.42%
Environmental	Environmental	47.58%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.42%
Terrestrial	Environmental → Terrestrial	46.77%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.97%
Sediment	Environmental → Aquatic → Sediment	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.55%
Loam	Environmental → Terrestrial → Soil → Loam	14.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.42%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	2.42%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Polar Desert	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Polar Desert	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459000	soil microbial communities from McMurdo Dry Valleys (Taylor Valley), Antarctica	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
T1_0709.00000020	2170459000	Polar Desert	RKFHPAIAAIKSGDSEGLKSLVSQDPSLATSRSSRSHPTLLQCLVLDALDLPNKVELAKVLIDAGAEVNGPLCAAGSIGNVEVAAALLDAGALIDGTGGWSPLEEALYWGTMVLSTCC
ICChiseqgaiiFebDRAFT_130783452	3300000363	Soil	MQAIQSGDLETFKSLLAADPSLATSRSTRSHPTLLQCLVLDGKDKPNAVEMAKALIDAGAELNEPLVAAGSIDNRPLAELLLDHGAEIDGTGGWSPLEEALYWNNRSVI
INPhiseqgaiiFebDRAFT_1058483503	3300000364	Soil	MDTKFLPAVAAVRSGDLQKFKQLVAEDPSLATLRSSTSHPTLLQCVALDGKDKPNNVEMAAVLVDAGAELNEPLVAAASINNRGVAELLLDRGAAIDGTGGWTPLEEALYWNSQDV
F14TC_1103379461	3300000559	Soil	MRSMEQYVHTLIMDAKFHSVIAAVKSDDLEKFKTLLVADPSLATTRSSRSHPTLLQCXTLDGKDNPNNVAMAEVLIDAGAELNEPLVAAASMNNRAVAELLLDRGAAIEGT
JGI1027J11758_128894373	3300000789	Soil	MDTKFLPAVAAVRSGDLQKFKQLVAEDPSLATLRSSTSHPTLLQCVALDGKDKPNNVEMAAVLVDAGAELNEPLVAAASINNRGVAELLLDRG
JGI10216J12902_1098480581	3300000956	Soil	MEANFHPAIAAVRSGDLERFKEIIAEDPSLATSRSSKSHPTLLQCVALDGKDKPNNVEMARVLIEAGAEVNEPLGAAASIDNRAVAELLLDHGAAIDGTGGWLPLEEALY
F14TB_1068296161	3300001431	Soil	MDARFLPAVAAVRSGDLEKFKQLLAEDPSLATTRSSTSHPTLLQCVALDGTDRPNNVEMATVLLDAGAELNEPLVAAGSINNGAVAELLLDRGAAVDGTGGWTPLEEALY
JGIcombinedJ43975_100916991	3300002899	Soil	MDLKFQPAIAAIRSGDLEKFKALIAADPSLATLRSSTSHPTLLQCVALDGNAKPHNVEMAAVLADAGAELNAPLIAAGSINNRGVAELLLDR
JGI25617J43924_100712171	3300002914	Grasslands Soil	MSSAAVKWEFAAQDPTLATSRSSTSHPTLLQCVALDDKGDGKDKPNNVEMAQVLIDAGAELNEPLVAAASIDNRAVAELLLDRGAAIDGTGDWSPLEE
Ga0062594_1011213341	3300005093	Soil	MDGKFHPAMAAVKTDDLDTFKALISADPTLATSRSSCSHPTLLQCVVLDGNGKSHNVQMAQILLDAGAELNEPFGATASIDNRACAELLLDHGASIDGTGGWSPLEE
Ga0066677_102055121	3300005171	Soil	MDAKFHRAIAAIRSGDLEKFKALVSQDPTLATSRSASSHPTLLQCVALDGKDKPNSVEMARVLIEAGAELNEPLVAAASIDNRAVAEVLLDHGAAIDGTGGWSPIEEA
Ga0065712_101107081	3300005290	Miscanthus Rhizosphere	MDTKFLPAVEAVRSGDLGKFKQLVALDPSLATSRSSTSHPTLLQCVALDGKDKPKNVEMAAALVDAGAELNEPLVAASGINNRAVAELLLDRGAAID
Ga0065705_106485282	3300005294	Switchgrass Rhizosphere	MDSRFRPANDAVNSDDLETFKALVAADSSLATTRSTRSHPTLLQCVALDGKDKPNNVEMARILIDAGAELNEPLVAAASIDNRAIAELLLDRGAAIDGTGGWSPLEEALH
Ga0066388_1042595531	3300005332	Tropical Forest Soil	MDVKFYPAIAAVKAGDLDKFKALIAADPTLATSRSSRSHPTLLQCVVLDGKDKPHNVEMAQILIDAGAELNEPFGATASMDNRACAELLLDHGAAIDGTGSWSP
Ga0070689_1010879062	3300005340	Switchgrass Rhizosphere	MDKKFHPAIEAMRAADVEKLRALVAADPSLATSRSTRSHPTLLQALVLEGKDKPKNLEMVEVLIDAGAELNEPFVAAASIDNRAAAELLLD
Ga0070671_1004460481	3300005355	Switchgrass Rhizosphere	MEKRFHPAMKAIQSGDLETFKSLLAADPSLATTRSTRSHPTLLQCLVLDGKDKPNAVEMAEVLIDAGAELNEPLVAAGSIDNRPVAELLLDHGAAIDGTGGWTPLEEALYWDS
Ga0070673_1002402973	3300005364	Switchgrass Rhizosphere	MEKRFHPAMKAIQSGDLETFKSMLAADPSLATTRSTRSHPTLLQCLVLDGKDKPNAVEMAEVLIDAGAELNEPLVAAGSIDNRPVAELLLDRGAAIDG
Ga0070673_1008519901	3300005364	Switchgrass Rhizosphere	MDTKFLPAVEAVRSGDLGKFKQLVALDPSLATSRSSTSHPTLLQCVALDGKDKPKNVEMAAALVDAGAELNEPLVAASGINNRAVAELLLDRGAAIDGTGGWIPLEEALYWNS
Ga0070701_110817061	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MDTKFLPAVEAVRSGDLGKFKQLVALDPSLATSRSSTSHPTLLQCVALDGKDKPKNVEMAAALVDAGAELNEPLVAASGINNRAVAELLLDRGAAI
Ga0070705_1008716401	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKAIQSGDLETFKSLLAADPSLATTRSMRSHPTLLQCLVLDGKDKPNAVEMAEVLIDAGAELNEPLVAAGSIDNRPVAELLLDCGAAIDGTGGWTPLE
Ga0070700_1015180001	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MDAKFHPAIEAMRAGDVEKLRALVAADPSLVTSRSSKSHPTLLQAVVLDGKDKPKNVEIIQVLIDAGAELNEPLVAAASIGNRAAAELLLDHGAAIDGTGGWSPLEEA
Ga0070699_1013417241	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MDKKFHPAIAAIKAGDVEKLKALVAEDPSLATSRSTRSHPTLLQCLVLDAKEKPNAREMATVLIDAGADVHEPFVAAASIDNRPVAELLLERGAAIDGTGGWTPIEEALYWNSQN
Ga0073909_104496481	3300005526	Surface Soil	MDAKFLPAVDAVRSGDLEKFKQVLSEDPLIATSRSSTSHPTLLQCVALDGKDKPNNVEMAAVLVDAGAELNEPLVAASGINNRAVAELLLDRGAAIDGTGGWTPL
Ga0070704_1018004761	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDAKFHPAIEAMRAADVEKLKALLTADPSLVTSRSSKSHPTLLQAVVLDGKDKPKNVEIIQVLIDAGAELNEPLVAAASIGNRAAVELLLDH
Ga0070664_1001872524	3300005564	Corn Rhizosphere	MIYTGAVMDAKFHPAMGAIRSGDVARFRALVAQDPSLATSRSSTSHPTLLQCLVLDGKDVPHAREMAAILIDAGAEINAPLVAAGSIDNRDVAELLLDRGAA
Ga0070664_1007563011	3300005564	Corn Rhizosphere	MDAKFHPAIAAVRYSDLEKFRSLIAADPSLATSRSSTSHPTLLQCVVLDGNDRPNNVEMAKVLIEAGAELNEPMIATGSINNRAVAELLLESGA
Ga0070664_1018887892	3300005564	Corn Rhizosphere	MKAIQSGDLETFKSLLAADPSLATTRSTRSHPTLLQCLVLDGKDKPNAVEMAEVLIDAGAELNDPLVAAGSIDNRPVAELLLDRGAAIDGAGGWTPLEEALYWNSREAI
Ga0068857_1015903262	3300005577	Corn Rhizosphere	MDKKFHPAMKAIKDGDVERLRGLVAEDPSLATSRSTRSHPTLLQCLALDAKDLPNAREMAEVLIDAGAELNEPLVAAGSIDNRPVAELLLDRGAAIDGAGGWSPLEEAL
Ga0068857_1023734221	3300005577	Corn Rhizosphere	MCPGRLVMDAKFHSAMAAIRSGNLERFKTLVAADPSLATARSTRSHPTLLQCVALDGNDKPNNVEMAEVLVTAGAELNEPLIAAASINNRAVVELLLDR
Ga0068856_1010925131	3300005614	Corn Rhizosphere	MDAKFHPAIAAVRSGDLEWFRSLIAADSSLATSRSSISHPTLLQCVVLDGNGRPNNVEMAEVLIEAGAELNEPMIATGSINNRAVAELLLDRGA
Ga0070702_1007314411	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKAIQSGDLETFKSLLAADPSLATTRSTRSHPTLLQCLVLDGKDKPNAVEMAEVLIDAGAELNDPLVAAGSIDNRPVAELLLDHGAAIDGTGGWTPLEEAL
Ga0068864_1011684121	3300005618	Switchgrass Rhizosphere	MKAIQSGDLETFKSLLAADPSLATTRSTRSHPTLLQCLVLDGKDKPHAVEMAEVLIDAGAELNEPLVAAGSIDNRPVAKLLLDRGAALDGTGGWTPLEEALYWNSREAIELF
Ga0068864_1024502551	3300005618	Switchgrass Rhizosphere	MDKKFHPAIEAMRAADVEKLRALVAADPSLATSRSTRSHPTLLQALVLDGKDKPKNIEMVQVLIDAGAELNEPLVAAASIDNRAAAELLLGPTTAATPTSVTFLAG*
Ga0066903_1047345761	3300005764	Tropical Forest Soil	MDSKFHPAMAAIASGDLTQFEQLVGEDPSLATSRSSTSHPTLLQCVALDGNGKPHNVEMAAVLVNAGAELNKPLVAAAGINNRVVVRLLLDHGAAIDGTGGWSPLEEALYWN
Ga0068863_1015748052	3300005841	Switchgrass Rhizosphere	MDTKFLPAVDAIRSGDLEKFKQVLAEDPLIATSRSLTSHPTLLQCVALDGKDKPNNVEMAAVLVDAGAELNEPLVAASGINNRAVAELLLDRGAAIDGSG
Ga0068860_1001637913	3300005843	Switchgrass Rhizosphere	MEKKFHPAMAAIQAGDLEKFTELLAADPSLATTRSMKSHPTLLQCLVLDGKDKPNAVEMAKVLIDAGAELDEPLVAAASIDNRPLAELLLDRGAAIDGTGGWTPLEEA
Ga0070716_1000604151	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDQKFHPAIEAIKSGDVEKLKSLLVDEPSLATSRSSRSHPTLLQCLVLDGKGKPNAREMATILIDGGAEINEPLVAAGSIDNRELAELLLDRGAAIDGTGDWSPL
Ga0070716_1018183732	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDAKFHPAIAAIRSGDLETFKALVSQDPTLATSRSSSSHPTLLQCVVLDGKDRPNNVEMARVLIDALHGPPATAGGSDKASAQLNQALVATASIDNRAVAELLLDHGASIDGTADWSPIEEALYWNS
Ga0097621_1024452422	3300006237	Miscanthus Rhizosphere	MDAKFHPAIAALQSGDLETFKALIAQDPSLATARSSCSHPTLLQCVALDGKDKPNNVEMAQVLIKAGAELNEAFVASASMNNRPVAELLL
Ga0079222_120846241	3300006755	Agricultural Soil	MEKRFHPAMKAIQSGDLETFKSLLAADPSLATMRSTRSHPTLLQCLVLDGKDKPNAVEMAEVLIDAGAELNEPLVAAGSIDNRPLAELLLDRGAAI
Ga0066665_112668261	3300006796	Soil	MDAKFHPAIAAIRSGDLEKFRALVSQDPTLATSRSSTSHPTLLQCVALEEEGDGKDKPNNVEMARVLIDAGADLNEPLVAAASINNRVVAEVLLDRGAAIDGTGGWLPLEEALYWNS
Ga0075433_113312981	3300006852	Populus Rhizosphere	MDAKFHPAIEAVRSGDLEKLKSLIAADPLLATSRSKTSHPTLLQCVVLDGKGRPNNVAMARVLIDAGAELNEPLVAAGSINNRAVAELIIDRGGAIDGTGGWSPLEE
Ga0075433_117676752	3300006852	Populus Rhizosphere	VDSKFHPAVAAIRSGDVEQLKALVAADPSLATSRSSRSHPTLLQCLVLDGNGKPNAREMADVLIDAGADMNEPLVAAGSIDNRAVAELLLDR
Ga0075425_1021006521	3300006854	Populus Rhizosphere	MDAKFHPAIEAIHADALEAFRTLIATDPSLATTRSTKSHPTLLQCVVLDGNGKRHNVEMAEVLIESGAELNEPLIATGSINNRPVAELLIDHGAAIDGTGGWTLFEEAL
Ga0075425_1030064451	3300006854	Populus Rhizosphere	MDVKFLPAIEAVRVGDVELFRTLITADPSLATSRSSISHPTLLQCVTLDGKDKPNNVEMARVLIDAGAELNEPLVAAGSIDNRAVAELLLDNGAAIDGTGGWSPLEEALYWNSQNVIALL
Ga0068865_1007015762	3300006881	Miscanthus Rhizosphere	MDAKFQPAIEAMRAGDVEKLRALVAADPSLVTSRSSKSHPTLLQAVVLDGKDKPKNVEIIQVLIDAGAELSDPLVAAASIGNRAAAELLLDH
Ga0079218_136804421	3300007004	Agricultural Soil	MNAKFHPAMKAVKSDDLEEFKRLVAEDPSLATTRSTRSHPTLLQCVVLEGKDKPNNVEMAKILIDAGAELTEPLVAAASMDNRAAAELLIDRGAAVDGTGGWTPLEEALYWNSKNVL
Ga0075435_1012481442	3300007076	Populus Rhizosphere	MDAKFHPAMAAVRADDLEKFRALIAADQSLATARSSVSHPTLLQCVVLDGNGRSKNMEMAEILIQAGAELNEPMIATGSINNRVVAELLLDHGALIDGTGGWSPLEEALYWNSQDVIAL
Ga0099793_107286821	3300007258	Vadose Zone Soil	MDAKFHPAIAAIRSGDLENFKALVSQDPTLATSRSSISHPTLLQCLTLDGKDKPNNVEMARVLIEAGAEINQPLVATASIDNRAVAELLLDHGAALDGTGGWSPIE
Ga0099827_113783841	3300009090	Vadose Zone Soil	MDAKFHPAIAAIRSGDLEKFRALVSQDPTLATSRSSTSHPTLLQCVALEGKGDGKDKPNNVEMARVLIEAGAELNEALVAAASINNHAVAKLLLDRGAAIDGTGGWSPLEEALYWNSRD
Ga0105240_108958323	3300009093	Corn Rhizosphere	MDTKFHPAIAAVRSGDIEKFRSLVASDPSLATSRSSTSHPTLLQCVVLDGNDRPNNVEMAEVLIEAGAELNEPLIATGSINNRAVAELLLDRGASIDGTGGWSPM
Ga0105247_112453871	3300009101	Switchgrass Rhizosphere	MEKRFHPAMKAIQSGDLETFKSLLAADPSLATTRSTRSHPTLLQCLVLDGKDKPHAVEMAEVLIDAGAELNEPLVAAGSIDNRPVAKLLLVRGAALDGTGGWTPLEEALYWNSREAIELFLERG
Ga0075423_100220331	3300009162	Populus Rhizosphere	MDAKFQAAVAAVREGDLERFKALLTADPSLATTRSSTSHPTLLQCVVLDSNDRRHTVEMAEALINAGAELNEPFVATGSIDNRAVAELLLDHGAAINGTGGWSPLEEALYWNSKRVIALLLERGARVLNLRIA
Ga0075423_101891733	3300009162	Populus Rhizosphere	MLDYIGQLRNLCNLWKNVSMEKRFHPAMAAIQSGDLEKFKQLVAADPSLATARSARSHPTLLQCLVLDGKDKPNAVEMAKVLIDAGAELNEPLVAAASIDNRPVAELLLDRGA
Ga0075423_103077651	3300009162	Populus Rhizosphere	MDAKFHPAIEAIHADALEAFRTLIATDPSLATTRSTKSHPTLLQCVVLDGNGKRHNVEMAEVLIESGAELNEPLIATGSINNRPVAELLIDHGAAIDGTGGWTLFEEALYWNSQDV
Ga0075423_113502492	3300009162	Populus Rhizosphere	MESKFHPAMKAIKAGDVETFKELVAADPSLATSRSTRSHPTLLQCLVLDGNGQPNAVEMATVLIDAGAELNEPLVAAGSIDNRPVGELLIERGAAIDGMGGWTPLEEALYWNSRNVIA
Ga0105241_105431191	3300009174	Corn Rhizosphere	MDTKFHPAMKAISAGDVERLRALVAEDPSLATSRSTRSHPTLLQCLVLDANGNPNGRAMAEILIDAGSELNEPLVAAASIGNREVAELLLDR
Ga0105241_126735361	3300009174	Corn Rhizosphere	MEQCVSMDSKFHAAIAAIESDDLEKFKTLVTADPSLATSRSSRSHPTLLQCVALDGKGKPNNVAMAEVLIDAGAELNEPLVAAGSINNRAVAELLLDRGAAIDGTGGWSPLEEALYWNS
Ga0105242_113203252	3300009176	Miscanthus Rhizosphere	MGKEVIMDTKFLPAVEAVRSGDLGKFKQLVALDPSLATSRSSTSHPTLLQCVALDGKDKPKNVEMAAALVDAGAELNEPLVAASGINNRAVAELLLDRGAAIDGTGGWTPLEEALYWNSQ
Ga0105248_131124032	3300009177	Switchgrass Rhizosphere	MEKRFHPAMKAIQSGDLETFKSLLAADPSLATMRSTRSHPTLLQCLVLDGKDKPNAVEMAEVLIDAGAELNEPLVAAGSIDNRPLAELLLDRGAAIDGTGGW
Ga0126374_106673191	3300009792	Tropical Forest Soil	MDAKFQTAEAAIKSDDLEKFKELVRQDPSLATTRSSTSHPTLLQCVVLSGKGKLNNVAMAQILIDAGAELNEPLVATGSMNNRAVAELLLDRGAAIDGTSGWSPLEEALYWNS
Ga0126315_102135433	3300010038	Serpentine Soil	MDAKFHPAIEAMRAGDVEKLKALVAADASLVTSRSSKSHPTLLQAVVLDGKDKPKNVEFVQVLIDAGAELNEPLVAAASIGNRAAAELLLD
Ga0126315_107101031	3300010038	Serpentine Soil	MDAKFHPAIEAMRAGDVEKLKALLSADPSLASSRSSRSHPTLLQALVLEGKDKPKNVEMVQVLIDGGAELNEPLVAACSIDNRAAAELLLDHGAAIDGTGSWSPLE
Ga0126382_123557451	3300010047	Tropical Forest Soil	MDTKFQPAIAAIQSGDLDKFKTLIKDDPSLATSRSSTGHPTLLQCAALDGKDKPNNVEIATVLIEAGAELNEPLVASASMDNAAVANLLLDRGAA
Ga0105239_126394401	3300010375	Corn Rhizosphere	MDAKFHPAIAVVKSGDLETFKALVAEDPSLATARSTISHPTLLQCVGLDGKDKPNNVEMAQVLVDAGAELNEPLVACGSMDNVAVAELLLDRGAAIDGTGGWSPLEEALYWNSRNVIALLLER
Ga0134124_128613891	3300010397	Terrestrial Soil	MDERFHGVMAAIGAGDLEQFKSLVAADPSLATTRSTRSHPTLLQCLVLDGKDKPHAVEMAEVLIDAGAELNEPLVAAGSIDNRPVAELLLDRGAALDGTGGWTPLEEALYWNS
Ga0134122_109503441	3300010400	Terrestrial Soil	MEKRFHPALKAIQSGDLETFKTLLAEDPSLATTRSTRSHPTLLQCLVLDGKDKPNAVEMAEVLIDAGAELNEPLVAAGSIDNRPLAELLLDCG
Ga0134121_103732243	3300010401	Terrestrial Soil	MEKRFHPAMKAIQSGDLETFKSLLAADPSLATTRSTRSHPTLFQCLVLDGKDKPNAVEMAEVLIDAGAELNEPLVAAGSIDNRPVAELLLDRGAAI
Ga0134121_108726072	3300010401	Terrestrial Soil	MGKEVIMDTKFLPAVEAVRSGDLGKFKQLVALDPSLATSRSSTSHPTLLQCVALDGKDKPKNVEMAAALVDAGAELNEPLVAASGINNRAVAELLLDRGAAIDGLVAGYLWRKLCTGIVRT*
Ga0134123_104590861	3300010403	Terrestrial Soil	MEERFHPAMKAIQSGDLETFKSLVAADPSLAITRSKRSHPTLLQCLVLDGKDKPNAVEMAQVLIGAGAELNEPLVAAGSIDNRPVAKLLLDRGAALDGTGGWTPLEEAL
Ga0137393_112499782	3300011271	Vadose Zone Soil	MDAKFHPAIAAIRSGDLETFKALLAQDPTLATSRSSTSHPTLLQCVALDDKGHGNDKPNNVEMAQVLIDAGAELNEPLVAAASIDNRAVTELL
Ga0137383_105657562	3300012199	Vadose Zone Soil	MDAKFHPAIAAIRSGDLETFKALVSQDPTLATSRSSTSHPTLLQCVALDGKDKPNNVEMARVLIEAGAEINQTLVATGSIDNRAVAQLLLDQGASIDGTGGWSPIEEALYWNSREVLALLLERGAAVQNL
Ga0137379_101851905	3300012209	Vadose Zone Soil	MDAKFHPAIAAIREGDLETFKALVSQDPTLATSRSSTSHPTLLQCVALDGKDKPNNVEMARVLIEAGAEINQTLVATGSIDNRAVAQLLLDQGASIDGTGGWSPIEEALYWNSREVLALLLERGAAVQNLRI
Ga0137371_100504371	3300012356	Vadose Zone Soil	MDAKFHPAIAAIRSGDLETFKALVSQDPTLATSRSSTSHPTLLQCVALDGKDKPNNVEMARVLIEAGAEINQTLVATGSIDNRAVAQLLLDQGASIDGTGGWSPIEEALYWNSREVIAL
Ga0137385_103133903	3300012359	Vadose Zone Soil	MDAKFHPAIAAIREGDLETFKALVSQDPTLATSRSTTSHPTLLQCVALDGKDKPNNVEMARVLIAAGAEINQTLVATGSIDNRAVAQLLLDRGASIDGTGGWSPIEEALY*
Ga0137361_100579844	3300012362	Vadose Zone Soil	MDAKFHRAIAPIRAGDLEKFKALVSQDPTLATSRSSTSHPTLLQCVALDGKDKPNNVEMAQVLIEAGAELNEPLVAAASINNRAVAEVLLDRGAAIDGTGGWSPLEE
Ga0157351_10501741	3300012501	Unplanted Soil	MDTKFLPAVDAVRSGDLEKFKQLLAEDSSLASSRSSTSHPTLLQCVALDGKDKPNNVEMAAVLVDAGAELNEPLVAAASVNNRSVAELLLDRGAAIDGTGGWTPLEEALYWNSQA
Ga0157373_111637811	3300013100	Corn Rhizosphere	MEKRFHPAMKAIQSGDLETFKSLLAADPSLATTRSTRSHPTLLQCLVLDGKDKPNAVEMAEVLIDAGAELNEPLIAAGSIENRPVAELLLDRGAAIDGTGGWTPL
Ga0157373_112860531	3300013100	Corn Rhizosphere	MDAKFHPAIEAMRAGDVEKLKALVAAEPSLVTARSSKSHPTLLQALVLDGKDKPKNVEMVQVLIDAGAELSEPLVAAASIDNRSAAELLLDHGAAIDGT
Ga0157372_129504351	3300013307	Corn Rhizosphere	MGKEVIMDTKFLPAVEAVRSGDLGKFKQLVALDPSLATSRSSTSHPTLLQCVALDGKDKPKNVEMAAALVDAGAELNEPLVAASGINNRAVAELLLDRGAAIDGTG
Ga0157372_131553861	3300013307	Corn Rhizosphere	MDAKFHPAIAAVRSSDLEKFRSLIAADPSLATSRSSTSHPTLLQCVVLDGNDRPNNVEMAKVLIEAGAELNEPMIATGSINNRAVAELLLESGASLDGTGGWSPLVAELYWNSRDVMALL
Ga0120188_10062063	3300013760	Terrestrial	MNAKFHPAMKAIRSDDLEKFKALVAEDPSLATSRSTRSHPTLLQCVVLEGKGQPNNVEMARFLIDAGAALNEPLVAAGSIDNRPVAELLLDHGAAIDGFVVDADVRGEQAGLAAGLETKLPRG
Ga0120188_10181391	3300013760	Terrestrial	MNAKFHPAMKAIQADDLEKFKTLVAEDPSLATSRSTRSHPTLLQCVVLEGKDKPNNVAMAKLLIDAGAELNEPLGAAASIDNRPVAELLLDRGAAIDGTGGWAPLGEALDWD
Ga0075310_11529241	3300014302	Natural And Restored Wetlands	MDAKFLPAIAAIRSGDLAGFEALVEKDPSLATARSSCSHPTLLQCVALDGSDKPNNVEMARVLIDAGAELDGPLGAAASIDNAAIAELLLEHGAVVD
Ga0157380_121624312	3300014326	Switchgrass Rhizosphere	VEQSPFESELIMNAKFHPAIKAVRSDDLETFKALVAKDPSLATSGSTQRHPTLLQCVVLDGNGQLNNVEMARVLIEAGAELDGPLVAAGSIDNRAAAELLLDH
Ga0120193_100291582	3300014965	Terrestrial	MDKKFHPAIVAIESDDLEKFKALVAADPSLATSRSAVSHPTLLQCVVLAGKDNPNNVAMAEVLVDAGAELNEPLVAAGSINNRAVAELLLDRGAAVDAYALGELL*
Ga0132256_1002892791	3300015372	Arabidopsis Rhizosphere	MLIGKEVTMDAKFLPAVDAVRSGDLEKFKQVLSEDPLIATSRSSTSHPTLLQCVALDGKDKPNNVEMATVLVDAGAELNEPLVAACGINNRAVAELLLDRGAAIDG
Ga0132256_1014642831	3300015372	Arabidopsis Rhizosphere	MAAVRSGNLEKFRSLLATDPSLATSRSSTSHPTLLQCVVLDGNDRPNNVEMAEVLIEAGAELNEPMIATGSINNRAVAELLLDRGASIDGTGG
Ga0132256_1031176741	3300015372	Arabidopsis Rhizosphere	MDTKFHPAIAAVRSGDLEKFRSLIAADPSLATSRSSTSHPTLLQCVVLDGNDRPNNVEMAEVLIEAGAELNEPMIATGSINNRAVAELLLDRGAFIDGTG
Ga0132255_1013023701	3300015374	Arabidopsis Rhizosphere	MLIGKEVTMDAKFLPAVDAVRSGDLEKFKQVLSEDPLIATSRSSTSHPTLLQCVALDGKDKPNNVEMAAVLVDARAELNEPLVAASGINNRAVAELLLD
Ga0132255_1029586281	3300015374	Arabidopsis Rhizosphere	MDAKFNPAVAAVRSGDLGTFTTLINQDPTLATARSSCSHPTLLQCVALDGKDKPGNVEMARVLIEAGAELNEPLVACASMDNRAVAELLLEHGAAIDGTGGWLPLEGGSALLE*
Ga0163161_120563911	3300017792	Switchgrass Rhizosphere	MDRKFHSAMAAVKTDDLDTFKALISADPTLATSRSSCSHPTLLQCVVLDGNGKSHNMEMAQILLDAGAELNEPFGATASIDNRACAELLLDHGASIDGTDGWS
Ga0184621_102424171	3300018054	Groundwater Sediment	MDAKFHPAIAAINSGDLETFKALIAQDPTLATARSSRSHPTLLQCVALEGKEKPNNVEMARVLVEAGAELNEPLVAAGSMNNRAVAEVLLDHGAAIDGTGGWLPLEEALYWNSR
Ga0190265_107405711	3300018422	Soil	MNSRFHPAMKAVKTDDLEQFKAALAAEPSLATERSTRSHPTLLQCVVLDGKDKPHNVEMAQILIESGSELNEPFVATASMDNRPCAELLLDHGAAIDGTGGWSPIEEALYWNS
Ga0190271_114694422	3300018481	Soil	MDAKFQPAVAAVRSGDLEKFKAALAGDPSLATARSSRSHPTLLQCVALDGNGNPHNAEMAKILIEAGAPLDEPFVAAASINNVPVATLLLEHGAAIDGTGGWSPLEEALYWNSR
Ga0207642_110424152	3300025899	Miscanthus Rhizosphere	MDAKFHPAIEAMRAGDVEKLRALVAADPSLVTSRSSKSHPTLLQAVVLDGKDKPKNVEIIQVLIDAGAELNEPLVAAASIGNRAAAELLLD
Ga0207710_101957002	3300025900	Switchgrass Rhizosphere	MEKRFHPAMKAIQSGDLETFKSLLAADPSLATTRSTRSHPTLLQCLVLDGKDKPHAVEMAEVLIDAGAELNEPLVAAGSIDNRPVAKLLLVRGAALDGTGGWTPLEEALYWNSREAIQLFLERGA
Ga0207688_105169372	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDAKFYPAMKAVKSGDLEKFKTLIAEDPSLATSRSTCSHPTLLQCVVLDGKDLPHNVEMAQVLIDAGAEIDEPFGACASMDNRACAELLLDHGASIDGT
Ga0207643_105361722	3300025908	Miscanthus Rhizosphere	MRAGDVEKLRALVAADPSLVTSRSSKSHPTLLQAVVLDGKDKPKNVEIIQVLIDSGAELNEPLVAAASIGNRAAAELLLDRGAAIDGTGGWSPLEEALYWNNR
Ga0207654_103332531	3300025911	Corn Rhizosphere	MDTKFHPAMKAISAGDVERLRALVAEDPSLATSRSTRSHPTLLQCLVLDANGNPNGRAMAEILIDAGSELNEPLVAAASIGNREVAELLLD
Ga0207657_114835891	3300025919	Corn Rhizosphere	MDAKFYPAIEAMRAADVEKLKALVAADPSLVTSRSTKSHPTLLQAVVLDGKDKPKNVEIVQALIDAGAELNEPLVAAASIGNRAAAELLLDHRAAIDGTGGWSPLEEALYW
Ga0207706_101170835	3300025933	Corn Rhizosphere	MRAGDVEKLRALVAADPSLVTSRSSKSHPTLLQAVVLDGKDKPKNIEIIQVLIDAGAELNEPLVAAASIGNRAAAELLLDRGAAIDGTAGW
Ga0207686_105225122	3300025934	Miscanthus Rhizosphere	MDTKFLPAVEAVRSGDLGKFKQLVALDPSLATSRSSTSHPTLLQCVALDGKDKPKNVEMAAALVDAGAELNEPLVAASGINNRAVAELLLDRGAAIDGTGGWTPLEEALYWNSQ
Ga0207670_104531791	3300025936	Switchgrass Rhizosphere	MDKKFHPAIEAMRAADVEKLRALVAADPSLATSRSTRSHPTLLQALVLEGKDKPKNLEMVEVLIDAGAELNEPFVAAASIDNRAAAELLLDHGAAIDGTGGWTA
Ga0207704_117281441	3300025938	Miscanthus Rhizosphere	MDAKFQPAIEAMRAGDVEKLRALVAADPSLVTSRSSKSHPTLLQAVVLDGKDKPKNVEIIQVLIDAGAELNEPLVAAASIGNRAAAELLL
Ga0207665_102762161	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDQKFHPAIEAIKSGDVEKLKSLLVDEPSLATSRSSRSHPTLLQCLVLDGKGKPNAREMATILIDGGAEINEPLVAAGSIDNRELAELLLDRGAAIDGTGDWSPLEEAL
Ga0207711_111113791	3300025941	Switchgrass Rhizosphere	MDKKFHPAIEAMRAADVEKLRALVAADPSLATSRSTRSHPTLLQALVLEGKDKPKNLEMVEVLIDAGAELNEPFVAAASIDNRAAAELLLDHGAAIDGTGGWTALEEALYWN
Ga0207679_121118712	3300025945	Corn Rhizosphere	MDAKFHPAIAAVRYSDLEKFRSLIAADPSLATSRSSTSHPTLLQCVVLDGNDRPNNVEMAKVLIEAGAELNEPMIATGSINNRAVAELLLESGAA
Ga0207703_104629473	3300026035	Switchgrass Rhizosphere	MDTKFLPAVEAVRSGDLGKFKQLVALDPSLATSRSSTSHPTLLQCVALDGKDKPKNVEMAAALVDAGAELNEPLVAASGINNRAVAELLLDRGAAIDGTGGWTPLEEALYWNSQNVIALL
Ga0207639_105076383	3300026041	Corn Rhizosphere	MEKKFHPAMAAIQAGDLEQFRELLAADPSLATTRSMKSHPTLLQCLVLDGKDKPNAVKMAKVLIDAGAELDEPLVAAASIDNRPLAELLLDRGAAIDGTGGWTPLEEALYWDSRNVLA
Ga0207639_122932152	3300026041	Corn Rhizosphere	MDAKFHPAINAMRAGDVELLKTLLAADPSLVTSRSSRSHPTLLQAVVLDGKDKPKNVEIVQVLIDAGAELNEPLVAAASIGNRAAAELLLDHGAAIDGIGGWSPL
Ga0207641_106089023	3300026088	Switchgrass Rhizosphere	MDAKFHPAIAAVRSGDLEWFRSLIAADSSLATSRSSISHPTLLQCVVLDGNGRPNNVEMAEVLIEAGAELNEPMIATGSINNRAVAELLLDRGAAIDGTGGWSPLEEALYWNSRDVI
Ga0207676_103468583	3300026095	Switchgrass Rhizosphere	MDAKFQPAIEAVKSGDLENFKALVAADPSLATTRSSKSHPTLLQCVALDGKDKPNNVEMAGVLIEAGAELNEPLIAAGSIDNRAVAELLLDRGAAIDGTSGWSPLE
Ga0207676_120557612	3300026095	Switchgrass Rhizosphere	MDKKFHPAIEAMRAADVEKLRALVAADPSLATSRSTRSHPTLLQALVLDGKDKPKNIEMVQVLIDAGAELNEPLVAAASIDNRAAAELLLDHGAAIDGTGGWSALEEALYW
Ga0207674_101568834	3300026116	Corn Rhizosphere	MNAKFHSALKAIQDDSLETFKAIIAADPSLATSRSTRSHPTLLQAVVLDGKDKANNVEMARVLIDAGAELSEPLVAAGSIDNRSVAELLLDRGAAIDGTGGWSPLEEALYWNNQNVLALLLER
Ga0207674_108391992	3300026116	Corn Rhizosphere	MKAIQSGDLETFKSLLAADPSLATTRSTRSHPTLLQCLVLDGKDKPHAVEMAEVLIDAGAELNEPLVAAGSIDNRPVAKLLLDRGAALDGTGGWTPLEEALYWNSREA
Ga0207675_1023364392	3300026118	Switchgrass Rhizosphere	MDAKFQAAVTAVESGDLARFKAALAADPSLATARSSSSHPTLLQCVALAGNGKPNNVEMARILVDAGAPIDEPFVAAASINNVPVAQLLLDRGAT
Ga0207698_104252771	3300026142	Corn Rhizosphere	MDTKFLPAVEAVRSGDLGKFKQLVALDPSLATSRSSTSHPTLLQCVALDGKDKPKNVEMAAALVDAGAELNEPLVAASGINNRAVAELLLDRGAAIDGTGGW
Ga0209648_106378061	3300026551	Grasslands Soil	MDAKFHPAIAAIRSGDLETFKALLAQDPTLATSRSSTSHPTLLQCVALDDKGDGKDKPNNVEMAQVLIDAGAELNEPLVAAASIDNRAVAELLLDRGAAIDGTGDWSPLEEAL
Ga0209215_10061952	3300027266	Forest Soil	MDKKFHPAMRAIQAGDVETLKGLVEADSSLATSRSTRSHPTLLQCLALDANGNPNARAMAEVLLAAGAELNEPLGAAASIGNREVAELLL
Ga0209731_10779141	3300027326	Forest Soil	MDAKFYPAMMAIKSGDLEQFKRLVATDPSLATSRSFCSHPTLLQCLVLDGKDKPNAVEMAKVLIDAGAELNDPLVAAGSIDNRPVVELLLDRGAPIDGTGGWTVLEEALYWNSRNVIESLLERG
Ga0209382_111882061	3300027909	Populus Rhizosphere	MDRKFHPAIAAIDSGNLEIFKALIRQDPTLATSRSSRSHPTLLQCVALEGKDKPNNVEMARVLIETGAELNEPFVASASINNRPVAEVLLDHGAAIDGAGGWLPIEEALYWNSQDVLALLLERGAKVQNLRIAAGLGRTDLIEGY
Ga0310813_122366811	3300031716	Soil	MDTKFHPAIAAVRSGDLEKFRSLIAADPSLATSRSSTSHPTLLQCVVLDGNDRPNNVEMAEVLIEAGAELNEPMIATGSINKRAVAELLLDRGASIDG
Ga0310897_100501901	3300032003	Soil	MDAKFYPAMKAVKSGDLEKFKTLIAEDPSLATSRSTCSHPTLLQCVVLDGKDLPHNVEMAQVLIDAGAEIDAPFGACASMDNRACAELLLDHD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069276

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences