Metagenome Family F069334

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069334
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	44 residues
Representative Sequence	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSED
Number of Associated Samples	96
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.42 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.13 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.452 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (52.419 % of family members)
Environment Ontology (ENVO)	Unclassified (95.161 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.065 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.78% β-sheet: 0.00% Coil/Unstructured: 65.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF13759	2OG-FeII_Oxy_5	5.65
PF02617	ClpS	3.23
PF01555	N6_N4_Mtase	2.42
PF09723	Zn-ribbon_8	2.42
PF13186	SPASM	1.61
PF03171	2OG-FeII_Oxy	1.61
PF13640	2OG-FeII_Oxy_3	1.61
PF01227	GTP_cyclohydroI	1.61
PF00856	SET	1.61
PF00152	tRNA-synt_2	0.81
PF00154	RecA	0.81
PF14226	DIOX_N	0.81
PF02348	CTP_transf_3	0.81
PF00462	Glutaredoxin	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	3.23
COG0863	DNA modification methylase	Replication, recombination and repair [L]	2.42
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	2.42
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	2.42
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.81
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.81
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.45 %
All Organisms	root	All Organisms	43.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.45 %
cellular organisms	root	All Organisms → cellular organisms	34.68 %
Viruses	superkingdom	All Organisms → Viruses	8.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.45 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	28.23 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.45 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	23.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.87 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	3.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	1.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.45 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	23.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.87 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.42 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	1.61 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.81 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.45 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	23.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.87 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	3.23 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.61 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.81 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.81 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.45 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	23.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.87 %
Marine Group I	clade	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I	3.23 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.61 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.81 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.81 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.81 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.81 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.45 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	23.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.87 %
Marine Group I thaumarchaeote	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	3.23 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.61 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.81 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.81 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.81 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.81 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.45 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	23.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.87 %
Marine Group I thaumarchaeote	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	3.23 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.61 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	0.81 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.81 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.81 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.81 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.45 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	23.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.87 %
Marine Group I thaumarchaeote	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	3.23 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.61 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.81 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	0.81 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.81 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.81 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000157\|LPaug08P261000mDRAFT_c1034755	Not Available	667	Open in IMG/M
3300000179\|LPjun09P16500mDRAFT_c1014779	Not Available	1297	Open in IMG/M
3300000190\|LPjun09P161000mDRAFT_c1013803	Not Available	1521	Open in IMG/M
3300002913\|JGI26060J43896_10133724	Not Available	631	Open in IMG/M
3300005424\|Ga0066826_10189319	Not Available	715	Open in IMG/M
3300005520\|Ga0066864_10053695	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1201	Open in IMG/M
3300005596\|Ga0066834_10159555	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	722	Open in IMG/M
3300005596\|Ga0066834_10211146	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	615	Open in IMG/M
3300005969\|Ga0066369_10188818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	676	Open in IMG/M
3300005969\|Ga0066369_10195486	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	662	Open in IMG/M
3300006019\|Ga0066375_10101999	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	918	Open in IMG/M
3300006076\|Ga0081592_1238349	Not Available	541	Open in IMG/M
3300006077\|Ga0081594_1250721	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	612	Open in IMG/M
3300006165\|Ga0075443_10125171	Not Available	897	Open in IMG/M
3300006304\|Ga0068504_1188302	Not Available	678	Open in IMG/M
3300006304\|Ga0068504_1342001	Not Available	618	Open in IMG/M
3300006308\|Ga0068470_1096071	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	561	Open in IMG/M
3300006310\|Ga0068471_1513283	Not Available	1358	Open in IMG/M
3300006313\|Ga0068472_10950630	Not Available	619	Open in IMG/M
3300006340\|Ga0068503_10280437	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300006340\|Ga0068503_10438785	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	734	Open in IMG/M
3300006340\|Ga0068503_10549616	Not Available	668	Open in IMG/M
3300006340\|Ga0068503_10652258	Not Available	1056	Open in IMG/M
3300006341\|Ga0068493_11221193	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	540	Open in IMG/M
3300006346\|Ga0099696_1128000	Not Available	1818	Open in IMG/M
3300006347\|Ga0099697_1268201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	750	Open in IMG/M
3300006347\|Ga0099697_1400931	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	632	Open in IMG/M
3300006414\|Ga0099957_1317490	Not Available	559	Open in IMG/M
3300006738\|Ga0098035_1065353	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1305	Open in IMG/M
3300006738\|Ga0098035_1105991	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	976	Open in IMG/M
3300006900\|Ga0066376_10537282	Not Available	656	Open in IMG/M
3300006902\|Ga0066372_10638101	Not Available	636	Open in IMG/M
3300006927\|Ga0098034_1126094	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	727	Open in IMG/M
3300006927\|Ga0098034_1171373	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	609	Open in IMG/M
3300008216\|Ga0114898_1209208	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	538	Open in IMG/M
3300009104\|Ga0117902_1794026	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	624	Open in IMG/M
3300009172\|Ga0114995_10052480	Not Available	2324	Open in IMG/M
3300009172\|Ga0114995_10186987	All Organisms → Viruses → Predicted Viral	1152	Open in IMG/M
3300009172\|Ga0114995_10268566	Not Available	941	Open in IMG/M
3300009172\|Ga0114995_10421182	Not Available	732	Open in IMG/M
3300009173\|Ga0114996_10064191	All Organisms → Viruses → Predicted Viral	3238	Open in IMG/M
3300009173\|Ga0114996_10752995	Not Available	709	Open in IMG/M
3300009409\|Ga0114993_11003691	Not Available	594	Open in IMG/M
3300009420\|Ga0114994_10088762	Not Available	2107	Open in IMG/M
3300009512\|Ga0115003_10665553	Not Available	606	Open in IMG/M
3300009526\|Ga0115004_10639304	Not Available	631	Open in IMG/M
3300009622\|Ga0105173_1072276	Not Available	607	Open in IMG/M
3300009706\|Ga0115002_10347740	Not Available	1108	Open in IMG/M
3300009706\|Ga0115002_10408998	Not Available	1002	Open in IMG/M
3300009706\|Ga0115002_11224377	Not Available	507	Open in IMG/M
3300009785\|Ga0115001_10742038	Not Available	593	Open in IMG/M
3300010149\|Ga0098049_1043233	Not Available	1446	Open in IMG/M
3300012950\|Ga0163108_10331151	Not Available	981	Open in IMG/M
3300017704\|Ga0181371_1027562	Not Available	937	Open in IMG/M
3300017728\|Ga0181419_1139542	Not Available	584	Open in IMG/M
3300020389\|Ga0211680_10279253	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	623	Open in IMG/M
3300020398\|Ga0211637_10290921	Not Available	649	Open in IMG/M
3300020398\|Ga0211637_10335927	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	599	Open in IMG/M
3300020449\|Ga0211642_10292097	Not Available	701	Open in IMG/M
3300020458\|Ga0211697_10090829	Not Available	1270	Open in IMG/M
3300021443\|Ga0206681_10322952	Not Available	598	Open in IMG/M
3300025072\|Ga0208920_1003627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	3700	Open in IMG/M
3300025078\|Ga0208668_1007116	Not Available	2552	Open in IMG/M
3300025078\|Ga0208668_1039761	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	896	Open in IMG/M
3300025078\|Ga0208668_1077491	Not Available	592	Open in IMG/M
3300025109\|Ga0208553_1111089	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	628	Open in IMG/M
3300025109\|Ga0208553_1120415	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	595	Open in IMG/M
3300025168\|Ga0209337_1173990	Not Available	905	Open in IMG/M
3300025219\|Ga0208470_1047454	Not Available	600	Open in IMG/M
3300025249\|Ga0208570_1012874	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1373	Open in IMG/M
3300025268\|Ga0207894_1020111	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300025281\|Ga0207881_1076177	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	515	Open in IMG/M
3300025584\|Ga0209774_1053100	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
3300026082\|Ga0208750_1092152	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	587	Open in IMG/M
3300026119\|Ga0207966_1080077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	791	Open in IMG/M
3300026188\|Ga0208274_1088766	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	732	Open in IMG/M
3300026200\|Ga0208894_1152481	Not Available	604	Open in IMG/M
3300026206\|Ga0207988_1106135	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	644	Open in IMG/M
3300026213\|Ga0208131_1036643	All Organisms → Viruses → Predicted Viral	1217	Open in IMG/M
3300026253\|Ga0208879_1088645	All Organisms → Viruses → Predicted Viral	1358	Open in IMG/M
3300026253\|Ga0208879_1282609	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	609	Open in IMG/M
3300026254\|Ga0208522_1118603	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	695	Open in IMG/M
3300026254\|Ga0208522_1164280	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	547	Open in IMG/M
3300026268\|Ga0208641_1140009	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	662	Open in IMG/M
3300027522\|Ga0209384_1108730	Not Available	650	Open in IMG/M
3300027685\|Ga0209554_1063516	All Organisms → Viruses → Predicted Viral	1302	Open in IMG/M
3300027700\|Ga0209445_1081850	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1015	Open in IMG/M
3300027714\|Ga0209815_1205478	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	607	Open in IMG/M
3300027752\|Ga0209192_10098860	All Organisms → Viruses → Predicted Viral	1210	Open in IMG/M
3300027779\|Ga0209709_10152258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1133	Open in IMG/M
3300027780\|Ga0209502_10322485	Not Available	658	Open in IMG/M
3300027788\|Ga0209711_10078569	Not Available	1723	Open in IMG/M
3300027801\|Ga0209091_10039289	Not Available	2823	Open in IMG/M
3300027801\|Ga0209091_10306406	Not Available	750	Open in IMG/M
3300027801\|Ga0209091_10413191	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	608	Open in IMG/M
3300027810\|Ga0209302_10285742	Not Available	766	Open in IMG/M
3300027810\|Ga0209302_10488243	Not Available	547	Open in IMG/M
3300027813\|Ga0209090_10341407	Not Available	733	Open in IMG/M
3300027827\|Ga0209035_10386564	Not Available	687	Open in IMG/M
3300027847\|Ga0209402_10018703	Not Available	5405	Open in IMG/M
3300028190\|Ga0257108_1204855	Not Available	558	Open in IMG/M
3300028192\|Ga0257107_1176428	Not Available	616	Open in IMG/M
3300028197\|Ga0257110_1124152	Not Available	1060	Open in IMG/M
3300028535\|Ga0257111_1184946	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	625	Open in IMG/M
3300031142\|Ga0308022_1083238	Not Available	967	Open in IMG/M
3300031510\|Ga0308010_1032952	Not Available	2181	Open in IMG/M
3300031519\|Ga0307488_10041633	All Organisms → Viruses → Predicted Viral	3608	Open in IMG/M
3300031588\|Ga0302137_1039431	All Organisms → Viruses → Predicted Viral	2002	Open in IMG/M
3300031625\|Ga0302135_10177251	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	950	Open in IMG/M
3300031644\|Ga0308001_10149367	Not Available	956	Open in IMG/M
3300031647\|Ga0308012_10206208	Not Available	774	Open in IMG/M
3300031693\|Ga0302139_10093739	Not Available	1376	Open in IMG/M
3300031695\|Ga0308016_10019030	All Organisms → Viruses → Predicted Viral	3055	Open in IMG/M
3300031695\|Ga0308016_10041083	Not Available	1990	Open in IMG/M
3300031695\|Ga0308016_10197541	Not Available	774	Open in IMG/M
3300031757\|Ga0315328_10243651	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1052	Open in IMG/M
3300031800\|Ga0310122_10169136	Not Available	1035	Open in IMG/M
3300031801\|Ga0310121_10417446	Not Available	758	Open in IMG/M
3300031803\|Ga0310120_10205430	Not Available	1076	Open in IMG/M
3300031803\|Ga0310120_10590595	Not Available	546	Open in IMG/M
3300032011\|Ga0315316_11240278	Not Available	597	Open in IMG/M
3300032048\|Ga0315329_10070398	Not Available	1733	Open in IMG/M
3300032278\|Ga0310345_10587337	All Organisms → Viruses → Predicted Viral	1071	Open in IMG/M
3300032278\|Ga0310345_12449989	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	79.84%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.10%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.03%
Coastal	Environmental → Aquatic → Marine → Coastal	1.61%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.61%
Strait	Environmental → Aquatic → Marine → Strait	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	65.32%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.10%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	9.68%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.84%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.61%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.61%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	52.42%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	9.68%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.45%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.45%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.65%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	4.03%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	4.03%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.23%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.61%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.81%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.81%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.81%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.81%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.81%
Diffuse Hydrothermal Fluid	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluid	0.81%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	0.81%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000157	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 1000m	Environmental	Open in IMG/M
3300000179	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 500m	Environmental	Open in IMG/M
3300000190	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 1000m	Environmental	Open in IMG/M
3300002913	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005520	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251	Environmental	Open in IMG/M
3300005596	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B	Environmental	Open in IMG/M
3300005969	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A	Environmental	Open in IMG/M
3300006019	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M
3300006077	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid B	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006346	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020398	Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020458	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025219	Marine microbial communities from the Deep Atlantic Ocean - MP0740 (SPAdes)	Environmental	Open in IMG/M
3300025249	Marine microbial communities from the Deep Indian Ocean - MP1202 (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300025281	Marine viral communities from the Deep Pacific Ocean - MSP-97 (SPAdes)	Environmental	Open in IMG/M
3300025584	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_150m_DNA (SPAdes)	Environmental	Open in IMG/M
3300026082	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV (SPAdes)	Environmental	Open in IMG/M
3300026119	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026188	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)	Environmental	Open in IMG/M
3300026200	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49 (SPAdes)	Environmental	Open in IMG/M
3300026206	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74 (SPAdes)	Environmental	Open in IMG/M
3300026213	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73 (SPAdes)	Environmental	Open in IMG/M
3300026253	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026254	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86 (SPAdes)	Environmental	Open in IMG/M
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027685	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027700	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - NADW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027810	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300028535	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500m	Environmental	Open in IMG/M
3300031142	Marine microbial communities from water near the shore, Antarctic Ocean - #353	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031588	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCM	Environmental	Open in IMG/M
3300031625	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_surface	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300031647	Marine microbial communities from water near the shore, Antarctic Ocean - #179	Environmental	Open in IMG/M
3300031693	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_33.1	Environmental	Open in IMG/M
3300031695	Marine microbial communities from water near the shore, Antarctic Ocean - #233	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPaug08P261000mDRAFT_10347554	3300000157	Marine	MTQKYDRFNLEAEIMSVWNTKDDLESITHRMMDDPDGPMTEDETT
LPjun09P16500mDRAFT_10147791	3300000179	Marine	MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDP
LPjun09P161000mDRAFT_10138034	3300000190	Marine	MTQKYDRFNLEAEIMTVWNTKDDLESITSHMMDDPDGPMTEDQLTNVLIGLSELHDI
JGI26060J43896_101337241	3300002913	Marine	MKYDRFNLEEEIQNVWQTKDDLNAIAERHYEDPDGPMSSDELS
Ga0066826_101893191	3300005424	Marine	MKYDRFNLEEEIQNVWQTKDDLNAIAERLHDDPDDPLWLMTQAEMGNLLTGLSELHETR
Ga0066864_100536951	3300005520	Marine	MTQHYNRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIG
Ga0066834_101595551	3300005596	Marine	MTQKYDRINLEEEIMNVWQTRDDLDAITERILDDPNGPMTEDEIGN
Ga0066834_102111461	3300005596	Marine	MTQKYDRMNLEEEIMNVWQTRDDLDAITERILDDPNGPMTEDEIG
Ga0066369_101888185	3300005969	Marine	MKYDRFNLEEEIQNVWQTKEDLDAIAERLHDDPDDP
Ga0066369_101954862	3300005969	Marine	MAQYDRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMTEDEIGNVL
Ga0066375_101019991	3300006019	Marine	MYDRFNLEEEIQNVWHTKEDLDAIAERVYDDPDGPMTEDEIGNVL
Ga0081592_12383491	3300006076	Diffuse Hydrothermal Fluids	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDEITNVLIGLSE
Ga0081594_12507211	3300006077	Diffuse Hydrothermal Fluid	MAQQYDRFNLEEEIQNVWHTKDDLNAIAERVYDDPDGPMTEDEIGN
Ga0075443_101251711	3300006165	Marine	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSED
Ga0068504_11883021	3300006304	Marine	MTQKYDRFNLEAEIMSVWNTKDDLELITSRMMDDPDPMTEDDITNV
Ga0068504_13420013	3300006304	Marine	MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPAPMSEDDIANVLI
Ga0068470_10960711	3300006308	Marine	MGQEYDRFNLEAEIMSVWNTKDDLNAITSRMMDDPDPMS
Ga0068471_15132831	3300006310	Marine	MTQKYDRFNLEAEIMSVWNTKDDLQLITSRMMDDPDGPMTEDELTN
Ga0068472_109506303	3300006313	Marine	MTQEYDRFNLEAEILNVWQTKDDLDAIAERVCDDPDGPL
Ga0068503_102804371	3300006340	Marine	MTQQYDRFNLEEEIQNIWQTKDDLDAIAERLIDGPNGPMSEDEIGNLLVGLSEL
Ga0068503_104387852	3300006340	Marine	MTQKYDRFNLEAEIMSVWNTKDDLESITRRMMDDPDGPMTEDELTNVL
Ga0068503_105496161	3300006340	Marine	MTQKYDRFNLEAEIMNVWNTKDDLESITSRMMDDPDPMSEDDITNVLIGLSEL
Ga0068503_106522581	3300006340	Marine	MTQKYDRFNLEAEIMNVWNTKDDLESITSRMMDDPDPMTEDDITNVLI
Ga0068493_112211931	3300006341	Marine	MNYDRFNLEEEIQNVWQTKDDLNAITERIYDDPDGPMTEDEISNVLIG
Ga0099696_11280001	3300006346	Marine	MTQKYDRFNLEAEIMNVWNTKDDLQSITGRMMDDPDGPLTE
Ga0099697_12682011	3300006347	Marine	MTQKYDRFNLESEIMHVWNTKDDLESITSRMMDDPDPMSEDDIANVL
Ga0099697_14009311	3300006347	Marine	MTDKKYDRFNLEAEIMNVWNTKDDLQSITGRMMDDPDGPMTEDELTNVLIGLS
Ga0099957_13174902	3300006414	Marine	MTQKYDRFNLEAEIMNVWNTKDDLESITSRMMDDPDPMTEDDITNV
Ga0098035_10653535	3300006738	Marine	MTQKYDRFNLEEEIMNVWQTRNDLDAVTERIIDDPDGPM
Ga0098035_11059911	3300006738	Marine	MTQKYDRMNLEEEIMNVWQTRDDLDAVTKRILDDPKGPMTEDEIGNVLIGLS
Ga0066376_105372821	3300006900	Marine	MSQQYNRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMTEDQIGNVLIGL
Ga0066372_106381012	3300006902	Marine	MTQKYDRFNLEAEIMCVWNTKDDLESITHRMMDDPAGP
Ga0098034_11260943	3300006927	Marine	MTQHYNRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIGN
Ga0098034_11713731	3300006927	Marine	MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIGN
Ga0114898_12092084	3300008216	Deep Ocean	MTQQYDRFNLEEEIQNIWQTKDDLDAIAERLIDGPNG
Ga0117902_17940261	3300009104	Marine	MTYKYDRFNLEEEIMYVWQTKKDLDAVIERIIDDPDGPMTEDELAN
Ga0114995_100524806	3300009172	Marine	MTEKKYEIFDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIANVLIGLTE
Ga0114995_101869873	3300009172	Marine	MTEKKYEIFDLEAEIMSVWSTKDDLESITYRLMDDPDGPLTEDEI
Ga0114995_102685663	3300009172	Marine	MIEKKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDDIA
Ga0114995_104211821	3300009172	Marine	MTDKKYDGFNLEAEIMNVWNTKDDLQSITGRMMDDPDGPMTEDEIA
Ga0114996_100641917	3300009173	Marine	MTEKKYEIYDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIANVLIGLTE
Ga0114996_107529953	3300009173	Marine	MKYDRFNLEEEIQNVWQTKDDLTAITERLYDDPDGPMTED
Ga0114993_110036912	3300009409	Marine	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDP
Ga0114994_100887621	3300009420	Marine	MTEKKYEIFDLEAEIMSVWNTKDDLESITYRLMDDPDGPLTEDEIANVLIGLTELHDIRCKKLFNV
Ga0115003_106655531	3300009512	Marine	MTEKKYEIFDLEAEIMSVWNTKDDLELITSRMMDDPDPMSEDDIANVL
Ga0115004_106393042	3300009526	Marine	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMS
Ga0105173_10722761	3300009622	Marine Oceanic	MAQYDRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMTED
Ga0115002_103477401	3300009706	Marine	MKYDRFNLEEEIQNVWQTKDDLNAIAERHYDDPDGPMSADELSNVLI
Ga0115002_104089981	3300009706	Marine	MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPDPMSEDDIANVLIGLTELHDI
Ga0115002_112243772	3300009706	Marine	MKYDRFNLEEEIQNVWQTKDDLDAITERLYDDPDGPMTEDE
Ga0115001_107420382	3300009785	Marine	MTEKKYEIFDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIAN
Ga0098049_10432331	3300010149	Marine	MTKKYELMDLEQAIQTVWQTKDDLDLITSRMMDGPKPM
Ga0163108_103311514	3300012950	Seawater	MKYDRFNLEEEIMNVWQTRDDLDAVTERIMDDPDGPMTE
Ga0181371_10275621	3300017704	Marine	MTQKYDRINLEEEIQNVWQTKDDLDAITERILDDPNGPMTEDQMANVLIGLSELHET
Ga0181419_11395423	3300017728	Seawater	MTQKYDRFNLEAEIMNVWNTKDDLQSITSRMLDDPDPMSEDDIANVLIGLI
Ga0211680_102792531	3300020389	Marine	MSQKYDRFNLEAEIMNVWNTKDDLQSITSRMMDDPDG
Ga0211637_102909212	3300020398	Marine	MTQKYDRFNLEAEIMNVWNTKDDLQSITGRMMDDPDPM
Ga0211637_103359273	3300020398	Marine	MGQEYDRFNLEAEIMSVWNTKDDLNAITSRMMDDPD
Ga0211642_102920972	3300020449	Marine	MSATYDRFTLEEEIQNVWHTKDDLDAIAERVCDDPDGPMTEDDL
Ga0211697_100908295	3300020458	Marine	MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPDPMSED
Ga0206681_103229523	3300021443	Seawater	MKYDRFNLEEEIQNVWQTKDDLNAIAERHYDDPDGPMNAD
Ga0208920_10036271	3300025072	Marine	MTQKYDRINLEEEIQNVWQTKDDLDAITERILDDP
Ga0208668_10071161	3300025078	Marine	MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIGNV
Ga0208668_10397611	3300025078	Marine	MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDP
Ga0208668_10774912	3300025078	Marine	MKYDRFNLEEEIQNVWQTKDDLNAIAERLHDDPDDPLWLMTQAEMGNVLTGLSELH
Ga0208553_11110895	3300025109	Marine	MTQKYDRINLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIGNVLIG
Ga0208553_11204151	3300025109	Marine	MTQKYDRMNLEEEIMNVWQTRDDLDAITERILDDPNGPMT
Ga0209337_11739903	3300025168	Marine	MIEKKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDDIANVLIGLTEL
Ga0208470_10474541	3300025219	Deep Ocean	MTQKYDRFNLESEIMHVWNTKDDLESITSRMMDDPD
Ga0208570_10128746	3300025249	Deep Ocean	MYDRFNLEEEIQNVWHTKEDLDAIAERVYDDPDGPMTEDQIGNLLIGL
Ga0207894_10201113	3300025268	Deep Ocean	MTQEYDRFNLEAEILNVWQTKDDLDAIAERVYDDPDGPLTEDEI
Ga0207881_10761771	3300025281	Deep Ocean	MKEITMTQQYDRFDLENEILNVWHTKDDLDVITERFLGAPGGSMTDD
Ga0209774_10531004	3300025584	Marine	MTQKYDRFNLEAEILSVWNTKDDLQSITSRMMDDPDGPM
Ga0208750_10921521	3300026082	Marine	MSQYDRMNLEEEIQNVWQTKNDLDAITERIIDDPDG
Ga0207966_10800772	3300026119	Marine	MKTNYDYFDLETEIQNVWHTKDDLDAITERIYDDPDGPMTEDEIGNVLLGLSELHET
Ga0208274_10887661	3300026188	Marine	MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEIGNVLIGLSELHE
Ga0208894_11524811	3300026200	Marine	MKYDRFNLEEEIQNVWQTKDDLNAIAERLHDDPDD
Ga0207988_11061351	3300026206	Marine	MTRHYNRMNLEEEIMNVWQTRDDLDAVTERILDDPKGPMTEDEI
Ga0208131_10366432	3300026213	Marine	MKYDRFNLEEEIQNVWQTKDDLTAITERIYDDPDGPMTEDE
Ga0208879_10886454	3300026253	Marine	MAQYDRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMTEDEIGNVLIG
Ga0208879_12826094	3300026253	Marine	MTQQYDRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMT
Ga0208522_11186031	3300026254	Marine	MTQHYNRMNLEEEIMNVWQTRDDLDAVTERILDDPKGP
Ga0208522_11642801	3300026254	Marine	MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDPKGP
Ga0208641_11400091	3300026268	Marine	MTQKYDRMNLEEEIMNVWQTRDDLDAVTERILDDPNGPM
Ga0209384_11087301	3300027522	Marine	MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPDPMSEDDIANVLVGLSELHD
Ga0209554_10635164	3300027685	Marine	MAQYDRFNLEEEIQNVWHTKDDLDAIAERVYDDPDGPMTE
Ga0209445_10818505	3300027700	Marine	MTQQYDRFNLEAEIMSVWNTKDDLNAITSRMMDDPDPMTEDDI
Ga0209815_12054781	3300027714	Marine	MKYDRFDLETGIQNVWQTRDDLESIAERIYDDPTGPMKEDD
Ga0209192_100988604	3300027752	Marine	MTEKKYEIFDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIANVLIG
Ga0209709_101522581	3300027779	Marine	MEQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPDPMT
Ga0209502_103224851	3300027780	Marine	MTDKKYDRFNLEAEIMRVWNTKDDLQSITSRMMDDPD
Ga0209711_100785694	3300027788	Marine	MTEKKYEIYDLEAEIMSVWNTKDDLESITSRMMDDPD
Ga0209091_100392896	3300027801	Marine	MTEKKYEIFDLEAEIMSVWNTKDDLELITSRMMDDPDPMSEDDIANVLIGLTELHDIRCK
Ga0209091_103064061	3300027801	Marine	MTEKKYEIYDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIANVLI
Ga0209091_104131912	3300027801	Marine	MYDRFDLEEEIMNVWHTKDDLDVIAERVYENPEGPMTEDAIVNVLTGLS
Ga0209302_102857421	3300027810	Marine	MTEKKYEIFDLEAEIMSVWNTKDDLELITSRMMDDPDGPLT
Ga0209302_104882431	3300027810	Marine	MTDKKYQPFDLEESIMNVWNTKDDLNAITSRMLDDPDPMS
Ga0209090_103414072	3300027813	Marine	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDDIA
Ga0209035_103865641	3300027827	Marine	MKYDRFNLEEEIQNVWQTKDDLNAIAERHYEDPDGPMSSDELSNVL
Ga0209402_1001870312	3300027847	Marine	MTEKKYEIYDLEAEIMSVWNTKDDLESITSRMMDDPDGPLTEDEIANVLIGLTEL
Ga0257108_12048553	3300028190	Marine	MTQEYDRFNLEAEILNVWQTKDDLDAIAERVCDDPDGPLTEDEIENVLIGLSELHDIRCK
Ga0257107_11764281	3300028192	Marine	MTQKYDRFNLEAEIMSVWNTKDDLQSITSRMMDDPDGPLTEDELTNVLIGLGELHD
Ga0257110_11241521	3300028197	Marine	MRKQYDRFDLESAIQTVWHTKDDLELITQRMVDDPDPM
Ga0257111_11849461	3300028535	Marine	MAQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPM
Ga0308022_10832385	3300031142	Marine	MKKDRFDLEEEIMNIWQTKDDLVAITERHYDDPDGPMTDDELSNVLIGLSELHETRCRR
Ga0308010_10329521	3300031510	Marine	MKYDRFNLEEEIQNVWHTKDDLNAITERFYDDPDGP
Ga0307488_100416337	3300031519	Sackhole Brine	MTEKKYEIYDLEAEIMSVWNTKDDLESITSRMMDDPDGPLT
Ga0302137_10394311	3300031588	Marine	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDDIANVLIGLSELH
Ga0302135_101772514	3300031625	Marine	MEYDRFNLEAEIMRVWNTKDDLESITSRMMDDPDGPMSED
Ga0308001_101493673	3300031644	Marine	MTEKKYEPFDLEESIMNVWNTKDDLNAITSRMLDDPDPMSED
Ga0308012_102062084	3300031647	Marine	MIYDRFNLEEEIQNVWQTKDDLNAIAERHYDDPDGPMT
Ga0302139_100937391	3300031693	Marine	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDD
Ga0308016_1001903011	3300031695	Marine	MKYDRFNLEEEIQNVWHTKDDLNAITERLYDDPDGPMTQ
Ga0308016_100410831	3300031695	Marine	MIYDRFNLEEEIQNVWQTKDDLNAIAERHYDDPDGPMTADELS
Ga0308016_101975411	3300031695	Marine	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPD
Ga0315328_102436512	3300031757	Seawater	MTQKYDRFNLEAEIMTVWNTKDDLESITSHMMDDPNG
Ga0310122_101691363	3300031800	Marine	MTKQYDRFNLETEIQNVWQTKDDLDAIAERIYDDPDGPMTE
Ga0310121_104174461	3300031801	Marine	MKYDRFNLEEEIQNVWQTKDDLNAITERVYDDPSGPMTE
Ga0310120_102054303	3300031803	Marine	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDEIAN
Ga0310120_105905951	3300031803	Marine	MTQKYDRFNLEEEIQNVWQTKDDLNAITERIYDDPDGPMTED
Ga0315316_112402781	3300032011	Seawater	MTQKYDRFNLEAEIMTVWNTKDDLESITSHMMDDPDGPMTEDQLTNVLIGLSELHD
Ga0315329_100703981	3300032048	Seawater	MTQKYDRFNLEEQIQNVWQTKDDLNAITERIYDDPDGPMT
Ga0310345_105873371	3300032278	Seawater	MKMYYDRFNLEEEIQNVWQTKDDLNAIAERHYDDPDGPMNADELSNV
Ga0310345_124499891	3300032278	Seawater	MTQKYDRFNLEAEIMSVWNTKDDLESITSRMMDDPDPMSEDDIANVLIGLSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069334

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences