NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069461

Metagenome / Metatranscriptome Family F069461

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069461
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 69 residues
Representative Sequence MPALFFRKLVQRIREEFEDAPNLRMTVSEAARFWALDFATCERVLRELLRTGFLARGPDERYGQVPVH
Number of Associated Samples 96
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 66.94 %
% of genes near scaffold ends (potentially truncated) 37.10 %
% of genes from short scaffolds (< 2000 bps) 81.45 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.581 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(21.774 % of family members)
Environment Ontology (ENVO) Unclassified
(29.839 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(59.677 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.58%    β-sheet: 8.33%    Coil/Unstructured: 52.08%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.4.5.33: Transcriptional regulator IclR, N-terminal domaind1jmrb31jmr0.74718
a.4.5.84: Rps19E-liked2v7fa12v7f0.7467
a.4.5.50: TrmB-liked2d1ha12d1h0.74151
a.4.5.19: Z-DNA binding domaind1sfua_1sfu0.741
a.4.5.0: automated matchesd4mtdb_4mtd0.73606

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF13505OMP_b-brl 17.74
PF00675Peptidase_M16 12.10
PF05193Peptidase_M16_C 10.48
PF00144Beta-lactamase 6.45
PF02321OEP 3.23
PF13473Cupredoxin_1 3.23
PF00127Copper-bind 2.42
PF00873ACR_tran 1.61
PF00158Sigma54_activat 1.61
PF05649Peptidase_M13_N 1.61
PF05368NmrA 0.81
PF08281Sigma70_r4_2 0.81
PF01401Peptidase_M2 0.81
PF13620CarboxypepD_reg 0.81
PF09980DUF2214 0.81
PF00691OmpA 0.81
PF05099TerB 0.81
PF09994DUF2235 0.81
PF12704MacB_PCD 0.81
PF07730HisKA_3 0.81
PF01370Epimerase 0.81
PF03358FMN_red 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 6.45
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 6.45
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 6.45
COG2367Beta-lactamase class ADefense mechanisms [V] 6.45
COG3590Predicted metalloendopeptidasePosttranslational modification, protein turnover, chaperones [O] 1.61
COG3793Tellurite resistance protein TerBInorganic ion transport and metabolism [P] 0.81
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.81
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.81
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.81
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.58 %
UnclassifiedrootN/A2.42 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000363|ICChiseqgaiiFebDRAFT_10920726All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium751Open in IMG/M
3300000443|F12B_10670376All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300000881|JGI10215J12807_1026407All Organisms → cellular organisms → Bacteria → Acidobacteria1196Open in IMG/M
3300000956|JGI10216J12902_103203032All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1053Open in IMG/M
3300001431|F14TB_102359281All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300002073|JGI24745J21846_1045487All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300004157|Ga0062590_100948871All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium811Open in IMG/M
3300004463|Ga0063356_100185703All Organisms → cellular organisms → Bacteria → Acidobacteria2429Open in IMG/M
3300004463|Ga0063356_100653979All Organisms → cellular organisms → Bacteria1434Open in IMG/M
3300004801|Ga0058860_12208405All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300005294|Ga0065705_11014333All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300005328|Ga0070676_10139448All Organisms → cellular organisms → Bacteria1542Open in IMG/M
3300005328|Ga0070676_10543333All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium831Open in IMG/M
3300005332|Ga0066388_102639639All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300005332|Ga0066388_102983837All Organisms → cellular organisms → Bacteria → Acidobacteria865Open in IMG/M
3300005332|Ga0066388_108623772All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300005333|Ga0070677_10257963All Organisms → cellular organisms → Bacteria → Acidobacteria868Open in IMG/M
3300005335|Ga0070666_10178298All Organisms → cellular organisms → Bacteria1490Open in IMG/M
3300005336|Ga0070680_100355676All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1245Open in IMG/M
3300005339|Ga0070660_101626741All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300005340|Ga0070689_100166341All Organisms → cellular organisms → Bacteria → Acidobacteria1785Open in IMG/M
3300005364|Ga0070673_101168812All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300005367|Ga0070667_100745626All Organisms → cellular organisms → Bacteria → Acidobacteria907Open in IMG/M
3300005459|Ga0068867_100267414All Organisms → cellular organisms → Bacteria → Acidobacteria1396Open in IMG/M
3300005518|Ga0070699_100630949All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium978Open in IMG/M
3300005616|Ga0068852_100902592All Organisms → cellular organisms → Bacteria → Acidobacteria901Open in IMG/M
3300005617|Ga0068859_101901731All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300005713|Ga0066905_100025194All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales3262Open in IMG/M
3300006049|Ga0075417_10039147All Organisms → cellular organisms → Bacteria2004Open in IMG/M
3300006049|Ga0075417_10143919All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300006806|Ga0079220_10834542All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300006844|Ga0075428_101897693All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300006845|Ga0075421_100031612All Organisms → cellular organisms → Bacteria6701Open in IMG/M
3300006845|Ga0075421_100459063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1520Open in IMG/M
3300006845|Ga0075421_100611586All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300006845|Ga0075421_101459741All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300006846|Ga0075430_100816959All Organisms → cellular organisms → Bacteria → Acidobacteria768Open in IMG/M
3300006847|Ga0075431_101315460All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300006852|Ga0075433_10008442All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria8218Open in IMG/M
3300006852|Ga0075433_10942705All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300006853|Ga0075420_100433589All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300006969|Ga0075419_10633924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia753Open in IMG/M
3300009094|Ga0111539_10750389All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1136Open in IMG/M
3300009100|Ga0075418_10019910All Organisms → cellular organisms → Bacteria7399Open in IMG/M
3300009101|Ga0105247_10718450All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium754Open in IMG/M
3300009147|Ga0114129_10107272All Organisms → cellular organisms → Bacteria3858Open in IMG/M
3300009147|Ga0114129_11531089All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300009156|Ga0111538_11694572All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium796Open in IMG/M
3300009162|Ga0075423_10700708All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1069Open in IMG/M
3300009162|Ga0075423_11786206All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300010047|Ga0126382_10146087Not Available1611Open in IMG/M
3300010362|Ga0126377_12301227All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300010362|Ga0126377_12484406Not Available594Open in IMG/M
3300010375|Ga0105239_13205396All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300010400|Ga0134122_10069320All Organisms → cellular organisms → Bacteria2738Open in IMG/M
3300010403|Ga0134123_10115584All Organisms → cellular organisms → Bacteria2164Open in IMG/M
3300011432|Ga0137428_1036195All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1275Open in IMG/M
3300011445|Ga0137427_10234747All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300012484|Ga0157333_1007612All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium734Open in IMG/M
3300012509|Ga0157334_1027074All Organisms → cellular organisms → Bacteria → Acidobacteria673Open in IMG/M
3300012519|Ga0157352_1103790All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300012892|Ga0157294_10107300All Organisms → cellular organisms → Bacteria → Acidobacteria726Open in IMG/M
3300012895|Ga0157309_10018919All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1485Open in IMG/M
3300012901|Ga0157288_10327305All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300012908|Ga0157286_10032769All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1230Open in IMG/M
3300012908|Ga0157286_10138441All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium762Open in IMG/M
3300012909|Ga0157290_10163647All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium724Open in IMG/M
3300013296|Ga0157374_10303320All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1580Open in IMG/M
3300013297|Ga0157378_10768681All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium987Open in IMG/M
3300015201|Ga0173478_10307880All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300015371|Ga0132258_10062077All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium8621Open in IMG/M
3300015371|Ga0132258_10255277All Organisms → cellular organisms → Bacteria4288Open in IMG/M
3300015371|Ga0132258_12181476All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1391Open in IMG/M
3300015371|Ga0132258_12418832All Organisms → cellular organisms → Bacteria → Acidobacteria1315Open in IMG/M
3300015371|Ga0132258_13461596All Organisms → cellular organisms → Bacteria → Acidobacteria1082Open in IMG/M
3300015372|Ga0132256_100834298All Organisms → cellular organisms → Bacteria → Acidobacteria1038Open in IMG/M
3300015372|Ga0132256_102343465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia637Open in IMG/M
3300015372|Ga0132256_102508566All Organisms → cellular organisms → Bacteria → Acidobacteria617Open in IMG/M
3300015373|Ga0132257_104242834Not Available521Open in IMG/M
3300015373|Ga0132257_104649738All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300018067|Ga0184611_1072018All Organisms → cellular organisms → Bacteria → Acidobacteria1176Open in IMG/M
3300018476|Ga0190274_10158603All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1924Open in IMG/M
3300018476|Ga0190274_10862651All Organisms → cellular organisms → Bacteria → Acidobacteria969Open in IMG/M
3300018481|Ga0190271_10020819All Organisms → cellular organisms → Bacteria → Acidobacteria5050Open in IMG/M
3300019362|Ga0173479_10146625All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium938Open in IMG/M
3300021082|Ga0210380_10408360All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium621Open in IMG/M
3300025885|Ga0207653_10142284All Organisms → cellular organisms → Bacteria → Acidobacteria878Open in IMG/M
3300025893|Ga0207682_10028605All Organisms → cellular organisms → Bacteria2226Open in IMG/M
3300025893|Ga0207682_10116247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1182Open in IMG/M
3300025899|Ga0207642_10255992All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium996Open in IMG/M
3300025908|Ga0207643_10014409All Organisms → cellular organisms → Bacteria → Acidobacteria4293Open in IMG/M
3300025920|Ga0207649_10002978All Organisms → cellular organisms → Bacteria9329Open in IMG/M
3300025945|Ga0207679_11549468All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300026089|Ga0207648_10065696All Organisms → cellular organisms → Bacteria → Acidobacteria3163Open in IMG/M
3300026142|Ga0207698_10780063All Organisms → cellular organisms → Bacteria → Acidobacteria957Open in IMG/M
3300027873|Ga0209814_10001803All Organisms → cellular organisms → Bacteria → Acidobacteria7680Open in IMG/M
3300027880|Ga0209481_10039441All Organisms → cellular organisms → Bacteria2164Open in IMG/M
3300027880|Ga0209481_10083269All Organisms → cellular organisms → Bacteria1528Open in IMG/M
3300027907|Ga0207428_10685455All Organisms → cellular organisms → Bacteria → Acidobacteria734Open in IMG/M
3300027909|Ga0209382_10066343All Organisms → cellular organisms → Bacteria → Acidobacteria4270Open in IMG/M
3300027909|Ga0209382_11202879All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium775Open in IMG/M
3300027909|Ga0209382_11660346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium629Open in IMG/M
3300028812|Ga0247825_10164425All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1525Open in IMG/M
3300028889|Ga0247827_11222088All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300031184|Ga0307499_10011755All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1774Open in IMG/M
3300031198|Ga0307500_10008728All Organisms → cellular organisms → Bacteria → Acidobacteria2074Open in IMG/M
3300031226|Ga0307497_10161748All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium939Open in IMG/M
3300031538|Ga0310888_10250802All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300031716|Ga0310813_10073557All Organisms → cellular organisms → Bacteria → Acidobacteria2587Open in IMG/M
3300031740|Ga0307468_100207341All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1333Open in IMG/M
3300031740|Ga0307468_100372195All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1076Open in IMG/M
3300031740|Ga0307468_101414221All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300031740|Ga0307468_102271994All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300031908|Ga0310900_10287876All Organisms → cellular organisms → Bacteria → Acidobacteria1201Open in IMG/M
3300032000|Ga0310903_10543152All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium612Open in IMG/M
3300032017|Ga0310899_10031461All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1814Open in IMG/M
3300032075|Ga0310890_10896277All Organisms → cellular organisms → Bacteria → Acidobacteria708Open in IMG/M
3300032144|Ga0315910_10041174All Organisms → cellular organisms → Bacteria → Acidobacteria3372Open in IMG/M
3300032157|Ga0315912_10588718All Organisms → cellular organisms → Bacteria → Acidobacteria886Open in IMG/M
3300032179|Ga0310889_10624270All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium557Open in IMG/M
3300033412|Ga0310810_10002446All Organisms → cellular organisms → Bacteria19956Open in IMG/M
3300034148|Ga0364927_0087838All Organisms → cellular organisms → Bacteria → Acidobacteria852Open in IMG/M
3300034151|Ga0364935_0059151All Organisms → cellular organisms → Bacteria → Acidobacteria1129Open in IMG/M
3300034667|Ga0314792_081015All Organisms → cellular organisms → Bacteria → Acidobacteria776Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere21.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.26%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.03%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.23%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.23%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.23%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.42%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere2.42%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.61%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.61%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.61%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.61%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.81%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000443Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemlyEnvironmentalOpen in IMG/M
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002073Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4Host-AssociatedOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004801Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011432Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012484Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510EnvironmentalOpen in IMG/M
3300012509Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6EnvironmentalOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034148Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17EnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M
3300034667Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiFebDRAFT_1092072623300000363SoilMGTPFFPKLVQRIREEFEYAPHLRMTVSEAARFWALDLATCERVLSELLRVGFIVRGSDQRYSCGACQV*
F12B_1067037613300000443SoilLVQLIREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG*
JGI10215J12807_102640723300000881SoilMPALLFRKLVQRIREEFDDAPNLRMTVSEAARFWGLDFATCERVLTELLRAGFLARGPDERFGQVAAH*
JGI10216J12902_10320303223300000956SoilMPALLFRKLVQRIREEFDDAPNLRMNVSEAARFWGLDFATCERVLTELLRTGFLARGPDERYGQVTVH*
F14TB_10235928123300001431SoilMAPPFFLKLVQCIREEFEDAPHLRLTVSEAARFWALDLATCERVLSELLRVGFIVRGADQRYSCLACAA*
JGI24745J21846_104548713300002073Corn, Switchgrass And Miscanthus RhizosphereREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0062590_10094887123300004157SoilFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0063356_10018570323300004463Arabidopsis Thaliana RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0063356_10065397923300004463Arabidopsis Thaliana RhizosphereMAPPFLSKLVQRIREEFEDAPHLRLTVSEAARFWALDLATTERVLSELLRMGFITRGPDQRYSCVACAA*
Ga0058860_1220840513300004801Host-AssociatedMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLSTCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0065705_1101433313300005294Switchgrass RhizospherePFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0070676_1013944833300005328Miscanthus RhizosphereMPALFFRKLVQRIREEFEDAPNLRMTVGEAARFWALDFATCERVLAELLRTGFLARGPDERYGQVAVH*
Ga0070676_1054333323300005328Miscanthus RhizosphereFFRKLVQRIREEFENAPNLRMTVSEAARFWALDFTTCERVLIELLRTGFLARGPDERYGPVTVH*
Ga0066388_10263963923300005332Tropical Forest SoilMLFKLVQRIREEFEDAPGLRMTIGEAARFWALDEDTCGRVLGRLLAGGFLAIDFDGRYGQLL*
Ga0066388_10298383723300005332Tropical Forest SoilMRPLFFRKLVQRIREEFENAPDLRMTICEAARFFALDLATCERVLVELLRTGSVSKGIDGRYGLPA
Ga0066388_10862377223300005332Tropical Forest SoilMASFPFRKLVQRIREEFEEFPNLRMTAIEAARFWGLDLATCERVLTELLLSGFLTLTADRRYRHVV*
Ga0070677_1025796313300005333Miscanthus RhizosphereMPALLFRKLVQRIREEFEDAPNLRMNVSEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQV
Ga0070666_1017829823300005335Switchgrass RhizosphereMPALLFRKLVQRIREEFEDAPNLRMTVSEAARFWGLDFATCERVLTELLRAGFLARGPDERFGQVVFH*
Ga0070680_10035567613300005336Corn RhizosphereMPPLFFRKLVQRIREEFENAPNLRMTVSEAARFWALDFTTCERVLIELLRTGFLARGPDERYGPVTVH*
Ga0070660_10162674113300005339Corn RhizosphereAFMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVAFH*
Ga0070689_10016634123300005340Switchgrass RhizosphereMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVAFH*
Ga0070673_10116881223300005364Switchgrass RhizosphereVRGVSFKLIQRIREEFEEFPGLRVSVTEAARFWGLDLATCEAILKELLAIGFLAEGTDQRYWPLQRT*
Ga0070667_10074562623300005367Switchgrass RhizosphereMPALLFRKLVQRIREEFEDAPNLRMTVSEAARFWGLDFATCERVLTELLRAGFLARGPD
Ga0068867_10026741433300005459Miscanthus RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVCEGARFWALDLSTCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0070699_10063094913300005518Corn, Switchgrass And Miscanthus RhizosphereMPPLFFRKLVQRIREEFENAPDLRVTVCEAARFFALDFATCERVLVELRRAGWMTRGPDHRYGLA*
Ga0068852_10090259223300005616Corn RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLSTCERVLTELLRAGFLALEADARYRQTTALL
Ga0068859_10190173123300005617Switchgrass RhizosphereMPPQVLRKLVQRIREEFENAPDLRMNVSEAARFWGLDLATCERVLTELLRTGFLARGADERYKQVPSM*
Ga0066905_10002519433300005713Tropical Forest SoilMARQMIMPTLFFRKLVQRIRDEFEYFPDLRLTASEAARFWGLDLATSERVLSELLLSGFLTRSADNRYRHVA*
Ga0075417_1003914723300006049Populus RhizosphereMAPPFFPKLVQCIREEFEDAPHLRLTVSEAARFWALDLATCERVLSELLRVGFIVRGADQRYSCLACAA*
Ga0075417_1014391933300006049Populus RhizosphereMQTFSFRKLVQLIREEFEEAPELRVTAGEAARFWALDLSTCERVLTELLRAGFLALGTDARYRQTTALIQSGTGSR*
Ga0079220_1083454223300006806Agricultural SoilMPSFPFRKLVQRIREEFEEFPTLRMTASEAARFWGLDLATCERVLTELLLSGFLILSADRRYRHVA*
Ga0075428_10189769313300006844Populus RhizosphereMPAVLFRKLVQRIREEFEDAPDLRMTVSEAARFWALDFATCEHVLKELLRTGFLARGPD
Ga0075421_10003161223300006845Populus RhizosphereMQTFSFRKLVQLIREEFEDAPDLRITVGEAARFWGLDLPTCERVLTELLRAGFLALGADARYRQTTLSTGRPVPCH*
Ga0075421_10045906313300006845Populus RhizosphereIREEFEDAPHLRLTVSEAARFWALDLATCERVLSELLRVGFIVRGADQRYSCLACAA*
Ga0075421_10061158623300006845Populus RhizosphereMGTPFFPKLVQRIHEEFEDAPHLRMSVSEAARFWGLDLATCERVLSELLRVGFIVRGADQRYSCVVCQA*
Ga0075421_10145974123300006845Populus RhizosphereMPAVLFRKLVQRIREEFEDAPDLRMTVSEAARFWALDFATCEHVLKELLRTGFLARGPDERYGLVTVH*
Ga0075430_10081695913300006846Populus RhizosphereMQTFSFRKLVQLIREEFEDAPDLRITVGEAARFWGLDLPTCERVLTELLRAGFLALGADARYRQTTLSTGRP
Ga0075431_10131546013300006847Populus RhizosphereMAPPFFPKLVQCIREEFEDAPHLRLTVSEAARFWALDLATCERVLSELLRVGFIVRG
Ga0075433_1000844263300006852Populus RhizosphereMRPLFFRKLVQRIREEFENAPDLRVTVSEAARFFALDCATSARVMSELLRTGSITRGPDQRYGLTVKQEIGILPEALA*
Ga0075433_1094270523300006852Populus RhizosphereMPPLFFRKLVQRIREEFENAPDLRVTVCEAARFFALDFATCERVLVELLRAGWVTRGPDHRYGLA*
Ga0075420_10043358923300006853Populus RhizosphereMAPLFFPKLVQCIREEFEDAPHLRLTVSEAARFWALDLATCERVLSELLRVGFIVRGADQRYSCLACAA*
Ga0075419_1063392423300006969Populus RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARY
Ga0111539_1075038923300009094Populus RhizosphereMPALLFRKLVQRIREEFEDAPSLRMTVSEAARFWGLDFATCERVLTELLRTGFLARGPDERFGQVAFH*
Ga0075418_1001991073300009100Populus RhizosphereFFPKLVQCIREEFEDAPHLRLTVSEAARFWALDLATCERVLSELLRVGFIVRGADQRYSCLACAA*
Ga0105247_1071845013300009101Switchgrass RhizospherePEDHMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0114129_1010727223300009147Populus RhizosphereMQPPFFRKLVQRIREEFEDAPGLRVTLSEAARFWALDLATCERVLTELLSAGFLARGADERYRQATM*
Ga0114129_1153108923300009147Populus RhizosphereMESDCCRLGTHMGRPFFPKLVQRIREEFEDAPHLRMTVSEAARFWGLDLATCERVLAELLRLRLIERGADQRYSCLVCASRAA*
Ga0111538_1169457223300009156Populus RhizosphereMPALLFRKLVQRIREEFEDAPSLRMTVSEAARFWGLDFATCERVLTELLRTGFLARGPDERFGQVAVH*
Ga0075423_1070070813300009162Populus RhizosphereMAPPFFPKLVQCIREEFEDAPHLRLTVSEAARFWPLDLATCERVLSELLRVGFIVRGADQRYSCLACAA*
Ga0075423_1178620613300009162Populus RhizosphereKLVQRIREEFENAPDLRVTVCEAARFFALDFATCERVLVELLRAGWVTRGPDHRYGLA*
Ga0126382_1014608723300010047Tropical Forest SoilMIMPTLFFRKLVQRIRDEFEYFPDLRLTASEAARFWGLDLATSERVLSELLLSGFLTRSADNRYRHVA*
Ga0126377_1230122723300010362Tropical Forest SoilMRSLFFRKLVQRIREEFENAPDLRVTVCEAARFFALDLATCERVLMELLRAGSVSKGVDGRFGFASLMPEH*
Ga0126377_1248440613300010362Tropical Forest SoilMPPPFFRKLVQRIREEFENAPDLRMTVCEAARFFGLDFATCERVLAELLSAGSVTRGPDQRYRLALV*
Ga0105239_1320539613300010375Corn RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARYRQTKALLQSG*
Ga0134122_1006932013300010400Terrestrial SoilMPPLFFRKLVQRIREEFENAPDLRVTVCEAARFFALDLATCERVMTELLRVGSVTRGPDQRYGLAACLA*
Ga0134123_1011558413300010403Terrestrial SoilGLAGFAMPPLFFRKLVQRIREEFEDAPDLRMTVSEAARFFALDFATCERVLTELLRDGFLARGIDQRYGLIA*
Ga0137428_103619523300011432SoilMPALLFRKLVQRIREEFEDAPNLRMNVSEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVAFH*
Ga0137427_1023474713300011445SoilMPALLFRKLVQRIREEFEDAPNLRMNVSEAARFWGLDFGTCERVLRELLRTGFLARGPDERFGQVAFH*
Ga0157333_100761223300012484SoilMQPFSFRRLVQLIREEFDRAPGLRITVREGARFWALDLSTCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0157334_102707423300012509SoilMQPFSFRRLVQLIREEFDRAPGLRITVIEGARFWALDLSTCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0157352_110379013300012519Unplanted SoilHMQPFSFRRLVQLIREEFDRAPGLRITAKEGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0157294_1010730023300012892SoilMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLIELLRTGFLARGPDERFG
Ga0157309_1001891923300012895SoilMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLTELLRMGFLARGPDERFWQVAVH*
Ga0157288_1032730513300012901SoilDAFMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVAFH*
Ga0157286_1003276923300012908SoilAFMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLTELLRMGFLARGPDERFWQVAGH*
Ga0157286_1013844123300012908SoilMQQFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0157290_1016364713300012909SoilPSLGTFPDAFMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLIELLRTGFLARGPDERFWQVAVH*
Ga0157374_1030332023300013296Miscanthus RhizosphereMQPFSFRRLVQLIREEFDRAPGLRSTVSEGARFWALDLSTCERVLTELLRAGFLALEADARYRQTTALLQSG*
Ga0157378_1076868123300013297Miscanthus RhizosphereFGPSLGTFPDAFMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVAFH*
Ga0173478_1030788013300015201SoilMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVVFH*
Ga0132258_10062077103300015371Arabidopsis RhizosphereMPPLFFRKLVQHIREEFENAPDLRMTIGEAARFFALDFATCERVMTELLASGFLARGADCRYRQASL*
Ga0132258_1025527733300015371Arabidopsis RhizosphereMPPLFFRKLVQRIREEFENAPDLRMTIGEAARFFALDFATCERVMIELLRTGSVTRGPDRRYRLAAT*
Ga0132258_1218147623300015371Arabidopsis RhizospherePSGPSLGTFPDGFMPALLFRKLVQRIREEFEDAPNLRMTVSEAARFWGLDFATCERVLTELLRAGFLARGPDERFGQVVFH*
Ga0132258_1241883233300015371Arabidopsis RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARYRQT
Ga0132258_1346159633300015371Arabidopsis RhizosphereMPPLFFRKLVQRIREEFENAPDLRMTVCEAARFFALDLATCERVMTELFRAGFVSRGVDGRYGLPA*
Ga0132256_10083429823300015372Arabidopsis RhizosphereMPALLFRKLVQRIREEFEDAPSLRMTVSEAARFWGLDFATCERVLTELLRMGFLARGP
Ga0132256_10234346513300015372Arabidopsis RhizosphereLVQHIREEFENAPDLRMTIGEAARFFALDFATCERVMTELLASGFLARGADCRYRQASL*
Ga0132256_10250856613300015372Arabidopsis RhizosphereMATHVFRKLVQRIREEFENAPDLRMTVNEAARFFGLDLAMCERVLAELRLVGFLARDADERYAHLA*
Ga0132257_10424283413300015373Arabidopsis RhizospherePGLSMPPLFFRKLVQHIREEFENAPDLRMTIGEAARFFALDFATCERVMTELLASGFLARGADCRYRQASL*
Ga0132257_10464973823300015373Arabidopsis RhizosphereFMPALLFRKLVQRIREEFEDAPNLRMTVSEAARFWGLDFATCERVLTELLRAGFLARGPDERFGQVVFH*
Ga0184611_107201813300018067Groundwater SedimentMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVAFH
Ga0190274_1015860323300018476SoilMPAPFFRKLVQWIREEFEDAPNLRMTVSEAARFWALDFATCERVLTELLRTGFLARGPDERYGQVTVH
Ga0190274_1086265123300018476SoilMPAPFFRKLVQRIREEFEDAPNLRMTVSEAARFWALDFATCERVLAELLRAGFLARGPDERYGPA
Ga0190271_1002081933300018481SoilMPAPFFRKLVQWIREEFEDAPNLRMTVSEAARFWALDFATCERVLAELLRAGFLARGPDERYGPAPVH
Ga0173479_1014662523300019362SoilGAVPFGPSLGTFPDAFMPALLFRKLVQRIREEFEDAPDLRMNVNEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVAFH
Ga0210380_1040836013300021082Groundwater SedimentSLSPSLRTFPDATMPAPFFRKLVQRIREEFEDAPNLRMTVSEAARFWALDFATCERVLAELLRAGFLARGPDERYGPAPVH
Ga0207653_1014228413300025885Corn, Switchgrass And Miscanthus RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG
Ga0207682_1002860533300025893Miscanthus RhizosphereMPALFFRKLVQRIREEFEDAPNLRMTVGEAARFWALDFATCERVLAELLRTGFLARGPDERYGQVAVH
Ga0207682_1011624723300025893Miscanthus RhizosphereMPALLFRKLVQRIREEFEDAPNLRMTVSEAARFWGLDFATCERVLTELLRAGFLARGPDERFGQVVFH
Ga0207642_1025599223300025899Miscanthus RhizosphereMPAPFFRKLVQRIREEFEDAPNLRMTVSEAARFWGLDFATCERVLTDLLRAGFLARGPDERFGQVVFH
Ga0207643_1001440933300025908Miscanthus RhizosphereMPPLFFRKLVQRIREEFENAPNLRMTVSEAARFWALDFTTCERVLIELLRTGFLARGPDERYGPVTVH
Ga0207649_1000297883300025920Corn RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLSTCERVLTELLRAGFLALEADARYRQTTALLQSG
Ga0207679_1154946823300025945Corn RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVKEGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG
Ga0207648_1006569623300026089Miscanthus RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVCEGARFWALDLSTCERVLTELLRAGFLALEADARYRQTTALLQSG
Ga0207698_1078006323300026142Corn RhizosphereMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLSTCERVLTELLRAGFLALEADARYRQTKALIQSGLGSR
Ga0209814_1000180323300027873Populus RhizosphereMAPPFFPKLVQCIREEFEDAPHLRLTVSEAARFWALDLATCERVLSELLRVGFIVRGADQRYSCLACAA
Ga0209481_1003944113300027880Populus RhizosphereATGELMAPPFFPKLVQCIREEFEDAPHLRLTVSEAARFWALDLATCERVLSELLRVGFIVRGADQRYSCLACAA
Ga0209481_1008326923300027880Populus RhizosphereMQTFSFRKLVQLIREEFEEAPELRVTAGEAARFWALDLSTCERVLTELLRAGFLALGTDARYRQTTALIQSGTGSR
Ga0207428_1068545523300027907Populus RhizosphereMPALLFRKLVQRIREEFEDAPNLRMNVSEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVA
Ga0209382_1006634323300027909Populus RhizosphereMQTFSFRKLVQLIREEFEDAPDLRITVGEAARFWGLDLPTCERVLTELLRAGFLALGADARYRQTTLSTGRPVPCH
Ga0209382_1120287923300027909Populus RhizosphereMGTPFFPKLVQRIHEEFEDAPHLRMSVSEAARFWGLDLATCERVLSELLRVGFIVRGAD
Ga0209382_1166034623300027909Populus RhizosphereMPAVLFRKLVQRIREEFEDAPDLRMTVSEAARFWALDFATCEHVLKELLRTGFLARGPDERYGLVTVH
Ga0247825_1016442513300028812SoilPFGPSLGTFPDAFMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLTELLRMGFLARGPDERFWQVAVH
Ga0247827_1122208823300028889SoilMAPPFFPKLVQCVREEFEDAPHLRLTVSEAARFWALDLATCERVLSELLRVGFIVRGADQRYSCLACAA
Ga0307499_1001175523300031184SoilMAALFFRKLVQRIREEFEEAPDLRMTVSEAARFWALDFATCERVLSELLRTGFLARGPDERYGQVTVH
Ga0307500_1000872833300031198SoilMPALLFRKLVQRIREEFEDAPNLRMTVNEAARFWALDFATCERVLTELLRTGFLARGPDERYGQVPVH
Ga0307497_1016174823300031226SoilMPAQLFRKLVQRIREEFEDAPNLRMTVSEATRFWALDVTTCERVLTELLRLGFLARGPDERYGQVAVH
Ga0310888_1025080223300031538SoilMAPPFFPKLVQCIREEFEDAPHLRLTVSEAARFWALDLATCELVLSELLRVGFIVRGADQRYSCLACAA
Ga0310813_1007355733300031716SoilMQPFSFRRLVQLIREEFDRAPGLRITVSEGARFWALDLSTCERVLTELLRAGFLALEADARYRQTTALLRSG
Ga0307468_10020734113300031740Hardwood Forest SoilKLVQRIREEFEDAPNLRLTVSEAARFWALDFATCERILTELVRSGFLARGPDERYGQVAA
Ga0307468_10037219523300031740Hardwood Forest SoilMAALFFRKLVQRIREEFEDAPDLRMTVSEAARFWALDFATCERVLSELLRTGFLARGPDERYGQVTVH
Ga0307468_10141422123300031740Hardwood Forest SoilMSAPFLRKLVQRIREEFEDAPNLRLTVSEAARFWALDFATCERILTELVGSGFLARGPDE
Ga0307468_10227199423300031740Hardwood Forest SoilMPPLFFRKLVQRIREEFENAPDLRVTVGEAARFFALDCATSARVLSELARSGSVTRGVDQRYRLRE
Ga0310900_1028787623300031908SoilMPALLFRKLVQRIREEFDDAPNLRMTVSEAARFWGLDFATCERVLTELLRAGFLARGPDERFGQVAAH
Ga0310903_1054315213300032000SoilDGFMPALLFRKLVQRIREEFDDAPNLRMTVSEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVAFH
Ga0310899_1003146123300032017SoilMPALLFRKLVQRIREEFEDAPNLRMNVNEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVAVH
Ga0310890_1089627723300032075SoilMSINIFRKLVQRIREEFEDAPDLRMTISEAARFFALDLATCERVLTQLLRDGFLAMGVDQRYGLV
Ga0315910_1004117433300032144SoilMPALFFRKLVQRIREEFEDAPNLRMTVSEAARFWALDFATCERVLRELLRTGFLARGPDERYGQVPVH
Ga0315912_1058871813300032157SoilMPPLFFRKLVQRIREEFEDAPNLRMNVSEAARFWGLDFATCEGVLTELLRTGFLARGPDERYG
Ga0310889_1062427023300032179SoilMQPFSFRRLVQLIREEFDRAPGLRITVSDGARFWALDLATCERVLTELLRAGFLALEADARYRQTTALLQSG
Ga0310810_1000244643300033412SoilMPPQVLRKLVQRIREEFENAPDLRMNVSEAARFWGLDLATCERVLTELLRTGFLARGADERYKQVPCL
Ga0364927_0087838_139_3453300034148SedimentMPALLFRKLVQRIREEFEDAPNLRMNVSEAARFWGLDFGTCERVLRELLRTGFLARGPDERFGQVAFH
Ga0364935_0059151_777_9833300034151SedimentMPALLFRKLVQRIREEFEDAPNLRMNVSEAARFWGLDFGTCERVLRELLRTGFLTRGPDERFGQVAFH
Ga0314792_081015_574_7743300034667SoilMPALLFRKLVQRIREEFEDAPNLRMNVSEAARFWGLDFGTCERVLIELLRTGFLARGPDERFGQVAS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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