NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F069477

Metagenome Family F069477

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069477
Family Type Metagenome
Number of Sequences 124
Average Sequence Length 87 residues
Representative Sequence AVAPGGTVLVFADAGEIPAAAVYRRELTLLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDTLKVVFTP
Number of Associated Samples 108
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.03 %
% of genes near scaffold ends (potentially truncated) 95.97 %
% of genes from short scaffolds (< 2000 bps) 96.77 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.194 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(15.323 % of family members)
Environment Ontology (ENVO) Unclassified
(38.710 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.161 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.36%    β-sheet: 7.27%    Coil/Unstructured: 66.36%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF08240ADH_N 61.29
PF13823ADH_N_assoc 7.26
PF00107ADH_zinc_N 4.03
PF13030DUF3891 1.61
PF00121TIM 0.81
PF01939NucS 0.81
PF00800PDT 0.81
PF00903Glyoxalase 0.81
PF13473Cupredoxin_1 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0077Prephenate dehydrataseAmino acid transport and metabolism [E] 0.81
COG0149Triosephosphate isomeraseCarbohydrate transport and metabolism [G] 0.81
COG1637Endonuclease NucS, RecB familyReplication, recombination and repair [L] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.19 %
UnclassifiedrootN/A0.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918007|ConsensusfromContig123234All Organisms → cellular organisms → Bacteria841Open in IMG/M
2170459002|FZY7DQ102GTSNFAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria527Open in IMG/M
3300000044|ARSoilOldRDRAFT_c027327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria520Open in IMG/M
3300000956|JGI10216J12902_100110461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium698Open in IMG/M
3300000956|JGI10216J12902_103737516All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300000956|JGI10216J12902_121955676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium542Open in IMG/M
3300001401|JGI20189J14885_1045935All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300001686|C688J18823_10378203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer919Open in IMG/M
3300003993|Ga0055468_10136823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria720Open in IMG/M
3300004114|Ga0062593_102339419All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300004479|Ga0062595_101739168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae → Thermoflexus → Thermoflexus hugenholtzii589Open in IMG/M
3300005174|Ga0066680_10683625All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005294|Ga0065705_10955051All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300005331|Ga0070670_102100681All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005336|Ga0070680_100621616All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300005344|Ga0070661_101612543All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005347|Ga0070668_100402729All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300005355|Ga0070671_100889776All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005355|Ga0070671_100905246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi771Open in IMG/M
3300005356|Ga0070674_100562877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae → Thermoflexus → Thermoflexus hugenholtzii958Open in IMG/M
3300005434|Ga0070709_11293978All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005436|Ga0070713_101303648All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300005441|Ga0070700_100036940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2967Open in IMG/M
3300005456|Ga0070678_101664691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi600Open in IMG/M
3300005466|Ga0070685_10910001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi655Open in IMG/M
3300005530|Ga0070679_101957001All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005535|Ga0070684_101379774All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300005557|Ga0066704_10820338All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300005575|Ga0066702_10619993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi648Open in IMG/M
3300005576|Ga0066708_10423511All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300005577|Ga0068857_100394863All Organisms → cellular organisms → Bacteria1286Open in IMG/M
3300005577|Ga0068857_101505669All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300005577|Ga0068857_101742509All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300005844|Ga0068862_100725456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria965Open in IMG/M
3300006034|Ga0066656_10477613All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300006050|Ga0075028_100574886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria666Open in IMG/M
3300006055|Ga0097691_1059661All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300006237|Ga0097621_100501305All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300006353|Ga0075370_10686201All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300006354|Ga0075021_10689725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria656Open in IMG/M
3300006846|Ga0075430_100586225All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300009012|Ga0066710_100796501All Organisms → cellular organisms → Bacteria1448Open in IMG/M
3300009012|Ga0066710_101372332All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300009012|Ga0066710_103127710All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300009090|Ga0099827_10725825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria859Open in IMG/M
3300009090|Ga0099827_10876409All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300009090|Ga0099827_11444920All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300009094|Ga0111539_10267397All Organisms → cellular organisms → Bacteria1990Open in IMG/M
3300009176|Ga0105242_10955690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium861Open in IMG/M
3300009176|Ga0105242_13204259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria508Open in IMG/M
3300010399|Ga0134127_11965691All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300010403|Ga0134123_12477344All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300011987|Ga0120164_1034968All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300012189|Ga0137388_10221631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1712Open in IMG/M
3300012353|Ga0137367_10608761All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus → Chondromyces apiculatus DSM 436764Open in IMG/M
3300012353|Ga0137367_10843820All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300012356|Ga0137371_11368900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria520Open in IMG/M
3300012360|Ga0137375_11400313All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300012507|Ga0157342_1015821All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria829Open in IMG/M
3300012527|Ga0136633_1009507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5414Open in IMG/M
3300012679|Ga0136616_10156772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1063Open in IMG/M
3300012897|Ga0157285_10380508All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012907|Ga0157283_10202683All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300012914|Ga0157297_10068815All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300012929|Ga0137404_11016769All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300012957|Ga0164303_10387350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria858Open in IMG/M
3300012986|Ga0164304_10702484All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300012988|Ga0164306_11204759All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300013096|Ga0157307_1103824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria608Open in IMG/M
3300013102|Ga0157371_11003691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria637Open in IMG/M
3300013104|Ga0157370_11130039All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300013296|Ga0157374_11751807All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300013772|Ga0120158_10248555All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300015358|Ga0134089_10475118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria544Open in IMG/M
3300015374|Ga0132255_103782213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria643Open in IMG/M
3300017695|Ga0180121_10200493All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300019767|Ga0190267_11421079All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300022880|Ga0247792_1004318All Organisms → cellular organisms → Bacteria2038Open in IMG/M
3300022898|Ga0247745_1076017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium558Open in IMG/M
3300025548|Ga0208716_1061135All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300025901|Ga0207688_10052767All Organisms → cellular organisms → Bacteria2279Open in IMG/M
3300025908|Ga0207643_10264130All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300025914|Ga0207671_11575917All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300025921|Ga0207652_10927601All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria768Open in IMG/M
3300025926|Ga0207659_11256006All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300025928|Ga0207700_10738374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria880Open in IMG/M
3300025931|Ga0207644_10809899All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300025932|Ga0207690_11541566All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300025934|Ga0207686_10723278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium793Open in IMG/M
3300025940|Ga0207691_10667078All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300025981|Ga0207640_10509448All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300026066|Ga0208290_1025986All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300026095|Ga0207676_10795037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria923Open in IMG/M
3300026118|Ga0207675_101012760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria849Open in IMG/M
3300027831|Ga0209797_10178847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria907Open in IMG/M
3300027842|Ga0209580_10628591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria532Open in IMG/M
3300027846|Ga0209180_10480606Not Available697Open in IMG/M
3300027882|Ga0209590_10992824All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300028587|Ga0247828_11027133All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300028589|Ga0247818_10475586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria850Open in IMG/M
3300028592|Ga0247822_11492156All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300028596|Ga0247821_10154418All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300028596|Ga0247821_11061541All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300028809|Ga0247824_10890731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium556Open in IMG/M
3300028809|Ga0247824_10935236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium544Open in IMG/M
3300028812|Ga0247825_10843711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium662Open in IMG/M
3300030336|Ga0247826_10187001All Organisms → cellular organisms → Bacteria1404Open in IMG/M
3300030336|Ga0247826_10440903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria971Open in IMG/M
3300031547|Ga0310887_10683749All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300031854|Ga0310904_10953107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium609Open in IMG/M
3300031858|Ga0310892_11227159All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria535Open in IMG/M
3300031892|Ga0310893_10435192All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300031996|Ga0308176_11327688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria764Open in IMG/M
3300032012|Ga0310902_10236027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1094Open in IMG/M
3300032012|Ga0310902_10384194All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300032770|Ga0335085_12363132All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300032805|Ga0335078_11781705All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300032829|Ga0335070_10514456All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300032954|Ga0335083_10640883All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300032955|Ga0335076_10344609All Organisms → cellular organisms → Bacteria1376Open in IMG/M
3300033158|Ga0335077_10840183All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300033550|Ga0247829_10135150All Organisms → cellular organisms → Bacteria1905Open in IMG/M
3300033550|Ga0247829_10769335All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300033805|Ga0314864_0191550All Organisms → cellular organisms → Bacteria533Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil15.32%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.45%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.03%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.23%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.23%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.23%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand2.42%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.42%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.42%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.61%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.61%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.61%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.81%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.81%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.81%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.81%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
2170459002Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cmEnvironmentalOpen in IMG/M
3300000044Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil oldHost-AssociatedOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001401Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012EnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011987Permafrost microbial communities from Nunavut, Canada - A20_80cm_0MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012507Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610Host-AssociatedOpen in IMG/M
3300012527Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)EnvironmentalOpen in IMG/M
3300012679Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300022880Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6EnvironmentalOpen in IMG/M
3300022898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5EnvironmentalOpen in IMG/M
3300025548Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026066Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027831Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033805Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A_all_C_005294602140918007SoilTILVFADAGAIPSARVYRGELTLVGVRSAAPQQMDEAVGMLGRLPLPEPTVLPLERFLDGLELFRRRDALKVVFTP
E1_027781102170459002Grass SoilATGAGAHALDAVEPGGTVLVFADAGELPADVVYRRELTVVGSRSATPEAMAAAAALLADLDVPEPTVLPLTRFDEGLDLFRRRAALKVVFIP
ARSoilOldRDRAFT_02732723300000044Arabidopsis RhizospherePVDAAVLCGPGGADTALDAVAPGGTVLVFADAGSIPLADVYRRELTVLGARSAAPPYMPEAVALLHDLDLPEPTVLPLERFAEGLELYRRRDATKVVFTT*
JGI10216J12902_10011046113300000956SoilEAALESVVPGGTVLVFADAGAIPASEVYRRELTVVGTRSAAPSYMPEALALLHDIDVPEPTVLPLGRFAEGLELFRRRDALKVVFTP*
JGI10216J12902_10373751623300000956SoilAALDALEPGGTVLVFADAGAIPAAPIYRRELTIVGTRSASPRFMESAAALLPELDLPEPTVLAMERFLDGLELYTQREALKVVFIP*
JGI10216J12902_12195567623300000956SoilTALEVLSPGGTLLVFAGAGSIPAKRVYHRELTIAGARSATPRGMRDAVALLGELTVPEPTVLPLEQFAEGLASFRRRDALKVVFTP*
JGI20189J14885_104593523300001401Arctic Peat SoilGGTLVVFADAGPLPAELLYRRELTVVGARSATPESMREAVALLPELDVPEPVVLPLERFAEGLDLFLRRETLKVVFVP*
C688J18823_1037820313300001686SoilPPVEAAVICARGAGAAALAAVDAGGFVLTFADAGPLDADEIYRRELTVVGSRSATPETMREAAQVLPLLAVPEPTVLPLERFADGLELFTSRRALKVVFTP*
Ga0055468_1013682323300003993Natural And Restored WetlandsLASVKPGGMLLVFADAGTIPAADVYRRELTVVGARSAAPSYMPEAVALLHDLDVPEPTVLPLERFAEGLELHRRRDVLKVVFTP*
Ga0062593_10233941923300004114SoilLAFADAGNLPLDPIYRRELTVVGVRSAAPPYMPEAVALLHDLEVPEPRVLPLERFEEGLELYRRREAAKVVFTP*
Ga0062595_10173916823300004479SoilVLCATGGAGTALDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0066680_1068362523300005174SoilAVAPGGTILVFADAGSIPAAPIYRRELTLLGSRSATPAAMREAAALLPQLDAPEPLVLPLEKFAEGLELFRRRDALKVVFTP*
Ga0065705_1095505123300005294Switchgrass RhizosphereLRPGGTLLAFADAGAIPVDPIYRRELTVVGSRSATPGHLREAVALLPELELLEATVLPLERFDEGLELYRSRHAAKVVFVP*
Ga0070670_10210068113300005331Switchgrass RhizosphereGTVLVFADAGEIPAAAVYRRELTLLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDTLKVVFTP*
Ga0070680_10062161613300005336Corn RhizospherePGGTVLVFADAGEIPAAAVYRRELTLLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDTLKVVFTP*
Ga0070661_10161254323300005344Corn RhizosphereVLVFADAGEMPTAAVYRRELTVVGARSATPAYMREALALLHNLDVPEPVVLPLERFAEGLELFLRRDALKVVFTP*
Ga0070668_10040272913300005347Switchgrass RhizosphereVAPGGTVLVFADAGEIPAAAVYRRELTLLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDTLKVVFTP*
Ga0070671_10088977623300005355Switchgrass RhizosphereAPDGPVDAVVLSGSGGVATALEVVAPGGTVLVFADAGEIPAAAVYRRELTVLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDAFKVVFTP*
Ga0070671_10090524623300005355Switchgrass RhizosphereILCATGGAGTALDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0070674_10056287713300005356Miscanthus RhizosphereLCAPGGADAAVRAVVPGGTVLVFADAGTLPLDDVYRRELHLVGSRSATPETLAEAIAILPELDLPAPTVLPLERFADGLELYRSGQALKVVFVP*
Ga0070709_1129397813300005434Corn, Switchgrass And Miscanthus RhizosphereAVEPGGTMLLFADAGAVPAEPVYRRELTVVGSRSATPEGMRAAALLLPDLDVPEPVVLPLARFVEGLDLFLRREALKVVFVP*
Ga0070713_10130364823300005436Corn, Switchgrass And Miscanthus RhizosphereGGTVLVFADAGELPAELVYRRELTVVGSRSATPESMRAAAALLPDFDVPEPTVLPLARFEEGLELFVRRQVLKVVFVP*
Ga0070700_10003694053300005441Corn, Switchgrass And Miscanthus RhizosphereGADTALDAVAPGGTVLVFADAGSIPLADVYRRELTVLGARSAAPPYMPEAVALLHDLDLPEPTVLPLERFAEGLELYRRRDATKVVFTT*
Ga0070678_10166469123300005456Miscanthus RhizosphereLVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0070685_1091000113300005466Switchgrass RhizosphereGPVDAAILCATGGAGTALDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0070679_10195700123300005530Corn RhizospherePVDAAVVCARGGAETALATVEPGGTVLLFAEAGAVPAEPVYRRELTVIGSRSATPEGMRVAASLLPELDVPEPVVLPLARFAEGLELFVRREALKVVFVP*
Ga0070684_10137977413300005535Corn RhizosphereAPDGPVDAAVLSGSGGVATALEAVAPGGTVLVFADAGEIPAAAVYRRELTLLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDTLKVVFTP*
Ga0066704_1082033813300005557SoilPGGTILVFADAGAIPAAAIYRRELTLVGSRSGTPAAMREAAALLPELEVPEPIVLPLDKFAEGLELFRRRDALKVVFTP*
Ga0066702_1061999313300005575SoilGVETAIDAVQPGGTILVFADAGPIPAAAVYRRELTLVGTRSATPQAMRAAASLLPELDLPTPVVLPLNRFAEGLELFRRRDALKVVFTP*
Ga0066708_1042351123300005576SoilTGRAPDGAVDAAVICARGGVETALEAVAPGGTIVLFADARGIPAQPLYRRELTVIGARSATPAHMEQAAALLTELDLPEPTVLPLERFAEGLELFRRRAILKVVFTP*
Ga0068857_10039486313300005577Corn RhizosphereGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0068857_10150566913300005577Corn RhizosphereALDAVAPGGTVLVFADAGGLPLSDVYRRELSVIGARSAAPHTMREAAALLHDLDVPEPRVLPLERFAEGLELHRRRDATKVVFVP*
Ga0068857_10174250913300005577Corn RhizospherePVDAAVLCGPGGADTALDAVAPGGTVLVFADAGSIPLADVYRRELTVLGARSAAPPYMPEAVAVLHDLDLPEPTVLPLERFAEGLELYRRRDATKVVFTT*
Ga0068862_10072545613300005844Switchgrass RhizosphereAAVLCGPGGADTALDAVAPGGTVLVFADAGSIPLADVYRRELTVLGARSAAPPYMPEAVALLHDLDLPEPTVLPLERFAEGLELYRRRDATKVVFTT*
Ga0066656_1047761323300006034SoilEVAVEAVSPGGTVLVFAGAGALPADAVYRRELTVVGSRSATPQAMREAAQLLPELDVPEPTVLPLARFDEGLALYRERRALKLVFTP*
Ga0075028_10057488613300006050WatershedsIAGRGGVETAVDAVRPGGTVIVFADTPAIPATRVYRDELTVVGVRSAAPSMMEQAVAMLGRLDLPEPTVLPLEKFLEGLDLFRRRDALKVVFRP*
Ga0097691_105966113300006055Arctic Peat SoilGTVLLFSDASALAAEQVYRRELTVVGSRSATPETMRAAVSLLPALDLPEPLVLPLARFAEGLDLFRRHEALKVVFVP*
Ga0097621_10050130523300006237Miscanthus RhizosphereGTVLVFADAGEIPAAAVYRRELTLLGARSATPAYMREALALLHDLEVPEPVVLPLERFAEGLELFLRRDTLKVVFTP*
Ga0075370_1068620113300006353Populus EndosphereALGPGGTVLVFADAGGLPLRDVYRRELTVAGARSAAPHTMREAAALLHDLEVPEPTVLRLERFAEGLELHRRRDATKVVFVP*
Ga0075021_1068972523300006354WatershedsIAGRGGVETAVDAVRPGGTVIVFADTAAIPATRIYRDELTVVGVRSAAPSLMEEAVALLSRLDVPEPTVLPLERFLEGLDLFRRRDALKVVFRP*
Ga0075430_10058622513300006846Populus RhizosphereVLVFADAGSIPLADVYRRELTVLGARSAAPPYMPEAVALLHDLDLPEPTVLPLERFAEGLELYRRRDATKVVFTT*
Ga0066710_10079650133300009012Grasslands SoilVICARGGVETAIDAVEPGGTILVFADAGAIPAAAIYRRELTLAGSRSGTPAAMREAAALLPELEVPEPIVLPLDKFAEGLELFRRRDALKVVFIP
Ga0066710_10137233223300009012Grasslands SoilKPGGTILVFADAGPIPAAAVYRRELTLVGTRSATPQAMRAAASLLPELDLPTPVVLPLNRFAEGLELFRRRDALKIVFTP
Ga0066710_10312771013300009012Grasslands SoilGGTVVVFADAGELPANVVYRRELTVVGARSATPGAMLEAAALLPELDVPEPTVLPLARFAEGLDLFLRRDALKVVFLP
Ga0099827_1072582523300009090Vadose Zone SoilVLVFADAGELQADVVYRRELTVVGSRSATPESMRAAARLLPDLDVPEPTVLPLDRFDEGLDLFVRRAALKVVFVP*
Ga0099827_1087640913300009090Vadose Zone SoilPDGPVDAVVVCARGGGADALELVEPGGTVLVFADAGTLPADVVYRRELAVAGSRSATPASMAEAARLLPELELPEPLVLPLERFAEGLVLFLRREALKVVFVP*
Ga0099827_1144492023300009090Vadose Zone SoilAAVICARGGVDTAIDAVEPGGTILVFADAGAIPAAPIYRRELTLVGSRSGTPAAMRNAAALLPDLDLPQPVVLPLDKFAEGLERFRHRDALKVVFTP*
Ga0111539_1026739713300009094Populus RhizosphereVAPGGTVLVFADAGALPLRDVYRRELTVVGARSAAPHAMREAVALLHDLEVPEPTVLPLERFAEGLELHRRRDATKVVFVP*
Ga0105242_1095569023300009176Miscanthus RhizosphereVFADAGPIPAAPVYHRELTIAGMRSATPAHMPEAVALLHELPVPEPTVLPLERFAEGLALFRSRGAVKVVFTP*
Ga0105242_1320425923300009176Miscanthus RhizosphereGPVDAAVLCGPGGTETALDAVAPGGTVLVFADAGGLPLSDVYRRELSVIGARSAAPHTMREAAALLHDLDVPEPRVLPLERFAEGLELHRRRDATKVVFVP*
Ga0134127_1196569123300010399Terrestrial SoilDGPVDAAILCATGGAGTALDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0134123_1247734413300010403Terrestrial SoilLPGGTVLVFADAGGVPAAPVYRKELTVVGSRSATPASMTEAAALLPELELPEPLVLPLDRFEEGLARFRARDVLKVVFVP*
Ga0120164_103496823300011987PermafrostGGTVLLFADAGALPAEPVYRRELTVVGSRSATPEAMRVAASLLPELDLPEPLVLPLDRFPEGLDLFLRRETLKVVFVP*
Ga0137388_1022163113300012189Vadose Zone SoilEPGGTILVFADAGAIPAAAIYRRELMLIGSRSGTPAAMRRAAALLPELELPEPLVLPLGKFAEGLELFRRRDALKVVFTP*
Ga0137367_1060876113300012353Vadose Zone SoilVLVFADAGELLSDGVYRRELTVVGSRSATPETMHAAAALLPELEVPEPTVLPLDRFDEGLELFRRREALKVVFTP*
Ga0137367_1084382023300012353Vadose Zone SoilPGGAVLVFADAGALPAEPVYRRELTVLGSRSATPETMLAAAALLPELDVPQPVVLPLERFAEGLDRFVRREVLKVVFAP*
Ga0137371_1136890023300012356Vadose Zone SoilCARGGVEAAIEAVSPGGTILVFADAGAIPAGPVYRRELTIVGTRSAAPRFMQSAAELLPELDVPEPTVVPLERFEEGLDLYRRREALKVVFTP*
Ga0137375_1140031313300012360Vadose Zone SoilETALDAVEPGGAVLVFADAGALPAEPVYRRELTVLGSRSATPETMLAAAALLPELDVPQPVVLPLERFAEGLDRFVRREVLKVVFAP*
Ga0157342_101582113300012507Arabidopsis RhizosphereRTPDGPVDAVVLSGSGGVATALEVVAPGGTVLVFADAGEIPAAAVYRRELTVLGARSATPAYMRESLALLHDLEVPEPVVLPLARFAEGLELFLRRDALKVVFTP*
Ga0136633_100950783300012527Polar Desert SandATAPGGTILVFADAGAIPAGPVYRRELTLVGSRSATQGAMREAAALLPALDLPEPTVLPLERFAEGLSRYRSGGALKVVFVP*
Ga0136616_1015677223300012679Polar Desert SandGGAEAAVRWVKPGGTILVFADAGMLPAAAVYRRELTLVGSRSATPERMAEAAALLPELDLPEPTVLPLERFAEGLALYRRGQAMKIVFIP*
Ga0157285_1038050823300012897SoilTLDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0157283_1020268323300012907SoilGGTMLVFADAGEIPAAAVYRWELTVAGARSATSAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDALKVVFTP*
Ga0157297_1006881513300012914SoilTGGAGTALDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0137404_1101676923300012929Vadose Zone SoilVLVFADAGDLPADVVYRRELAVVGSRSATPAAMREAAALLPELDVLEPVVLPLERFAEGLELFTSRRALKVVFTP*
Ga0164303_1038735023300012957SoilAAEAVVPGGTIVLFADAGAIPAAPVYRRELTLVGARSATPAYMDTAARLLPELELPEPTVLPLERFAEGLELYRSGDALKVVFTP*
Ga0164304_1070248423300012986SoilLCATGGAGTALDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0164306_1120475923300012988SoilDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0157307_110382413300013096SoilLCGLGGADTALDAVAPGGTVLVFADAGSIPLADVYRRELTVLGARSAAPPYMPEAVALLHDLDLPEPTVLPLERFAEGLELYRRRDATKVVFTT*
Ga0157371_1100369123300013102Corn RhizosphereLSGSGGVATAVEAVAPGGTVLVFADAGSIPLADVYRRELTVLGARSAAPPYMPEAVALLHDLDLPEPTVLPLERFAEGLELYRRRDATKVVFTT*
Ga0157370_1113003923300013104Corn RhizosphereAVLCATGGAGTALDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP*
Ga0157374_1175180713300013296Miscanthus RhizosphereLDAVAPGGTVLVFADAGSIPLADVYRRELTVLGARSAAPPYMPEAVAVLHDLDLPEPTVLPLERFAEGLELYRRRDATKVVFTT*
Ga0120158_1024855523300013772PermafrostVLVFADAGALPAELVYRHELTVIGSRSATPEAMRDAASLLPELGLPEPVVLPLDRFAEGLDLFLRREALKVVFVP*
Ga0134089_1047511813300015358Grasslands SoilAAALEAVEPGGTVVVFADAGELPADVVYRRELTVVGARSATPGAMLEAAALLPELDVPEPTVLPLARFAEGLDLFLRRDALKVVFLP*
Ga0132255_10378221313300015374Arabidopsis RhizosphereGPVDAVVLSGSGGVANALEVVAPGGTVLVFADAGEIPAAAVYRRELTVLGARSATPAYMRESLALLHDLEVPEPVVLPLARFAEGLELFLRRDALKVVFTP*
Ga0180121_1020049323300017695Polar Desert SandLLPLLNGAYAELLLVPGGSLLVFADAGAIPAAEVYRRGLAGVGTRSAAPPYMPEAVALLDRLDVPEPTVLPLDRFAEGLDLFRRNEALKVVFTP
Ga0190267_1142107923300019767SoilPDGPVDAAVLSGRGGVETALAHVAPGGTVLVFADAGPIPAADVYRRELTLVGTRSASPPSMPEAAALLDDLDVPEPVVLPLARFADGLDLFRRRDALKVVFTP
Ga0247792_100431843300022880SoilLACVKPGGTVVVFAEAGVIPAGEVYRRELTIVGTRSAAPPYMSEAVALLHDLDVPEPTVLLLERFAEGLELHRRRDALKVVFTL
Ga0247745_107601713300022898SoilGTVVVFAEAGVIPAGEVYRRELTIVGTRSAAPPYMPEAVALLHDLDVPEPTVLLLERFAEGLELHRRRDALKVVFTL
Ga0208716_106113523300025548Arctic Peat SoilPGGTLVVFADAGPLPGDAVYRRELTIVGARSATPESMRAAVALLPELDLPEPVVLPLERFADGLELFLRREALKVVFVP
Ga0207688_1005276733300025901Corn, Switchgrass And Miscanthus RhizosphereGPVDAAVLSGSGGVVTALEAVAPGGTVLVFADAGEIPAAAVYRRELTLLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDTLKVVFTP
Ga0207643_1026413013300025908Miscanthus RhizosphereGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP
Ga0207671_1157591713300025914Corn RhizosphereADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP
Ga0207652_1092760113300025921Corn RhizospherePVDAAVVCARGGAETALATVEPGGTVLLFAEAGAVPAEPVYRRELTVIGSRSATPEGMRVAASLLPELDVPEPVVLPLARFAEGLELFVRREALKVVFVP
Ga0207659_1125600613300025926Miscanthus RhizospherePGGTILVFADAGEIPAAAVYRRELTVLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLESFLRRDALKVVFTP
Ga0207700_1073837423300025928Corn, Switchgrass And Miscanthus RhizosphereVCARGAGADALEAVQPGGTVLVFADAGELPAELVYRRELTVVGSRSATPESMRAAAALLPDFDVPEPTVLPLARFEEGLELFVRRQVLKVVFVP
Ga0207644_1080989923300025931Switchgrass RhizosphereILCATGGAGTALDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP
Ga0207690_1154156623300025932Corn RhizospherePVDAAILCATGGAGTALDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP
Ga0207686_1072327813300025934Miscanthus RhizosphereVFADAGPIPAAPVYHRELTIAGMRSATPAHMPEAVALLHELPVPEPTVLPLERFAEGLALFRSRGAVKVVFTP
Ga0207691_1066707813300025940Miscanthus RhizosphereGTALDALVPGGMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP
Ga0207640_1050944813300025981Corn RhizosphereMLLAFADAGSLPLDPVYRRELTVVGARSAAPPYMPEAVALLHDLEIPEPRVLPLERFGEGLGLYRRREAAKVVFTP
Ga0208290_102598623300026066Natural And Restored WetlandsVLQGGTVLAFADAGSIPLADVYRRELTVVGARSAAPPYMPEAVALLHDLDVPEPTVLPLERFADGLELYRRRDATKVVFTA
Ga0207676_1079503713300026095Switchgrass RhizosphereLCGPGGTETALDALGPGGTVLVFADAGGLPLRDVYRRELTVAGARSAAPHTMREAAALLHDLEVPEPTVLRLERFAEGLELHRRRDATKVVFVP
Ga0207675_10101276013300026118Switchgrass RhizosphereDGPVDAAVLSGSGGVVTALEAVAPGGTVLVFADAGEIPAAAVYRRELTLLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDTLKVVFTP
Ga0209797_1017884713300027831Wetland SedimentMTRAVLAVALESVRPGGTILVFADAGPIPAAPVYRRELTLLGVRSAAPQVMDEALALLPHLELPTPTVLPLARFAEGLELFRRRDALKVVFVP
Ga0209580_1062859113300027842Surface SoilDGPVDAAVVCARGAGADALEAVQPGGTVLVFADAGELPAELVYRRELTVVGSRSATRESMRAAAALLPDLDVPEPTVLPLARFEEGLELFVRREVLKVVFVP
Ga0209180_1048060623300027846Vadose Zone SoilMRRRSLALGLPVSVAVVICARGGVETAIDAVEPGGTILVFADAGAIPAAAIYRRELTLVGSRSGTPAAMRDAAALLPELDVPEPIVLPLDKFAEGLE
Ga0209590_1099282413300027882Vadose Zone SoilRPLDGSVDAAVICARGGVDTAIDAVEPGGTILVFADAGAIPAAPIYRRELTLVGSRSGTPAAMRNAAALLPDLDLPQPVVLPLDKFAEGLERFRHRDALKVVFTP
Ga0247828_1102713323300028587SoilAVAPGGTVLVFADAGEIPAAAVYRRELTLLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDTLKVVFTP
Ga0247818_1047558613300028589SoilAVLCGRGGVETALAHVAPGGTVLVFADAGPIPAADVYRRELTLVGTRSASPPSMPEAAALLDDLDVPEPVVLPLARFADGLDLFRRRDALKVVFTP
Ga0247822_1149215623300028592SoilISGRGGVETALAHVAPGGTVLVFADAGPIPAADVYRRELTLLGIRSASPPSMPEAAALLDDLDVPEPVVLPLARFADGLDLFRRRDALKVVFTP
Ga0247821_1015441833300028596SoilRAERALAALRPGGTLLAFADAGALPVDPIYRRELTVVGSRSATPAHLRDAAALLPELELPEPTVLSLERFAEGLELYRSRQAAKVVFVP
Ga0247821_1106154123300028596SoilVAPGGTVLVFADGGPLPLNDVYRRELAVVGTRSAAPHTMREAVALLHDLEVPEPTVLPLERFAEGLALHRHRDATKVVFVP
Ga0247824_1089073123300028809SoilGRGGVEAALESVVPGGTVLVFADAGIAPASEVYRRELTVVGTRSAAPSYMPEALALLHDIDVPEPTVLPLGRFAQGLELFRRRDALKVVFTP
Ga0247824_1093523613300028809SoilTVLVFADAGPVPTSDIYRRELTVAGTRSAAPSYMPEALALLHDIDVPEPTVLPLERFADGLELFRRRDALKVVFTP
Ga0247825_1084371123300028812SoilGEHVVLSGRGGIEAALESVVPGGTVLVFADAGAIPASEVYRRELTVVGTRSAAPSYMPEALALLHDIDVPEPTVLPLGRFAQGLELFRRRDALKVVFTP
Ga0247826_1018700133300030336SoilAHVSPGGTVLVFADAGPIPAADVYRRELTLVGTRSASPPSMPEAAALLDDLDVPEPVVLPLARFADGLDLFRRRDALKVVFTP
Ga0247826_1044090323300030336SoilVLVFADAGGLPLGDVYRRELTVIGARSAAPHTMREAVALLHDLEVPEPTVLPLERFAEGLGLHRRRDATKVVFVP
Ga0310887_1068374923300031547SoilPGGTVLVFADAGEIPAAAVYRRELTLLGARSATPAYMREALALLHDLEVPEPVVLPLERFAEGLELFLRRDTLKVVFTP
Ga0310904_1095310723300031854SoilPVDAVVLSGRGGIEAALESVVPGGTVLVFADAGAIPASEVYRRELTVVGTRSAAPSYMPEALALLHDIDVPEPTVLPLGRFAQGFELFRRRDALKVVFTP
Ga0310892_1122715913300031858SoilGGADAAVHAVVPGGSVLVFADAGTLPLDDVYRRELHLVGSRSATPETLAEAVALLPELDLPAPTVLPLERFAEGLELYRSGEALKVVFQP
Ga0310893_1043519223300031892SoilTVLVFADAGEIPAATVYRRELTVLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDALKVVFTP
Ga0308176_1132768823300031996SoilDTALDAVAPGGTVLAFADAGSISLADLYRRELTVVGARSAAPQYMPQAVALLDELDVPEPTVLPLERFAEGLELYRRRDATKVVFTT
Ga0310902_1023602723300032012SoilVRAVVPGGTVLVFADAGTLPLDDVYRRELHLVGSRSATPETLAEAIAILPELDLPAPTVLPLERFADGLELYRSGQALKVVFVP
Ga0310902_1038419413300032012SoilGTVLVFADAGEIPAATVYRRELTVLGARSATPAYMREALALLHDLDVPEPVVLPLERFAEGLELFLRRDALKVVFTP
Ga0335085_1236313213300032770SoilAALAAVRAAGTVVVFADAGPLEADAIYRGELTVVGRRSATDDAMRVAAALLPELALPAPTVLPLARFDEGLELFRRRDAAKVVFVP
Ga0335078_1178170523300032805SoilPGGTLVVFADAGPLPADAVYRRELTVVGARSATPESMREAAALLPELDLPEPVVLPLERFADGLELFLRREALKVVFVP
Ga0335070_1051445613300032829SoilAATALERVSPGGTILVFADAGPLPADEIYRRELTVVGRRSATADAMRAAAALLPELDLPAPTELPLERFQEGLDLFLRRDAAKVVFVP
Ga0335083_1064088313300032954SoilVFADAGPLEADAIYHGELTVVGRRSATEDAMRVAAALLPELELPAPTVLPLARFDEGLELFRRRDAAKVVFVP
Ga0335076_1034460913300032955SoilAPGSSATVLERVSPGGTILVFADAGDLPAGEIYRRELTVVGRRSATADAMRAAAALLPQLELPAPTVVPLERFQEGLDLFLRRDAAKVVLVP
Ga0335077_1084018323300033158SoilPGSSETALERVSPGGTILVFADAGDLPAGEIYRRELTVVGRRSATADAMRAAAALLPQLELPAPTVVPLERFQEGLDLFLRRDAAKVVLVP
Ga0247829_1013515033300033550SoilVAPGGTVLVFADGGPLPLNDVYRRELAVVGTRSAAPHTMREAVALLHDLEVPEPTVLPLERFAEGLALHRHRDATKVVFVR
Ga0247829_1076933513300033550SoilVLCGRGGVGTALAHVVPGGTVLVFADAGPIPAADVYRRELTLVGTRSASPPSMPEAAALLDDLDVPEPVVLPLARFVDGLDLFRRRDALKVVFTP
Ga0314864_0191550_2_2533300033805PeatlandGAVEPGGTILVFADAGAVPAAPIYRRELTIVGSRSAVPATMREAAALLPELDLPEPTVLPLARFADGLELFRRRSALKVVFVP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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