Metagenome Family F069614

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069614
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	60 residues
Representative Sequence	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRNLARAHNQKAGSK
Number of Associated Samples	82
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.49 %
% of genes near scaffold ends (potentially truncated)	34.96 %
% of genes from short scaffolds (< 2000 bps)	66.67 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (82.927 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (44.715 % of family members)
Environment Ontology (ENVO)	Unclassified (82.114 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (86.179 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.67% β-sheet: 0.00% Coil/Unstructured: 63.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01541	GIY-YIG	0.81
PF09636	XkdW	0.81
PF07460	NUMOD3	0.81
PF02557	VanY	0.81
PF13392	HNH_3	0.81
PF13640	2OG-FeII_Oxy_3	0.81
PF00583	Acetyltransf_1	0.81
PF00476	DNA_pol_A	0.81
PF10124	Mu-like_gpT	0.81
PF05838	Glyco_hydro_108	0.81
PF13759	2OG-FeII_Oxy_5	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.81
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG3926	Lysozyme family protein	General function prediction only [R]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.93 %
All Organisms	root	All Organisms	17.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.93 %
Viruses	superkingdom	All Organisms → Viruses	13.82 %
cellular organisms	root	All Organisms → cellular organisms	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.76 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.76 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.76 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.76 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.76 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c000538	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	11011	Open in IMG/M
3300000176\|TB03JUN2009E_c002556	Not Available	4229	Open in IMG/M
3300000176\|TB03JUN2009E_c002821	Not Available	3978	Open in IMG/M
3300000176\|TB03JUN2009E_c021628	Not Available	969	Open in IMG/M
3300000203\|TB18AUG2009E_c001387	All Organisms → Viruses → Predicted Viral	4184	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1004013	Not Available	9568	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1044771	Not Available	1648	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10020817	Not Available	5262	Open in IMG/M
3300002091\|JGI24028J26656_1000072	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	50349	Open in IMG/M
3300002933\|G310J44882_10037533	All Organisms → Viruses → Predicted Viral	1126	Open in IMG/M
3300002933\|G310J44882_10077162	Not Available	713	Open in IMG/M
3300002933\|G310J44882_10132613	Not Available	518	Open in IMG/M
3300003375\|JGI26470J50227_1000531	All Organisms → cellular organisms → Bacteria	15491	Open in IMG/M
3300003375\|JGI26470J50227_1009169	Not Available	2527	Open in IMG/M
3300003375\|JGI26470J50227_1029975	All Organisms → Viruses → Predicted Viral	1091	Open in IMG/M
3300003375\|JGI26470J50227_1057373	Not Available	658	Open in IMG/M
3300003787\|Ga0007811_1009434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	956	Open in IMG/M
3300003797\|Ga0007846_1000909	All Organisms → Viruses → Predicted Viral	4502	Open in IMG/M
3300003797\|Ga0007846_1002641	Not Available	2370	Open in IMG/M
3300003797\|Ga0007846_1002993	All Organisms → Viruses → Predicted Viral	2182	Open in IMG/M
3300003798\|Ga0007842_1000629	Not Available	3144	Open in IMG/M
3300003806\|Ga0007864_1001922	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300003809\|Ga0007869_1002793	Not Available	2311	Open in IMG/M
3300003813\|Ga0007879_1021025	Not Available	665	Open in IMG/M
3300003813\|Ga0007879_1027717	Not Available	557	Open in IMG/M
3300003852\|Ga0031655_10020431	Not Available	3186	Open in IMG/M
3300003943\|Ga0007808_1005386	Not Available	622	Open in IMG/M
3300004095\|Ga0007829_10073354	Not Available	674	Open in IMG/M
3300004095\|Ga0007829_10099910	Not Available	588	Open in IMG/M
3300004460\|Ga0066222_1218039	Not Available	641	Open in IMG/M
3300004684\|Ga0065168_1000682	All Organisms → cellular organisms → Bacteria	5705	Open in IMG/M
3300004684\|Ga0065168_1081036	Not Available	512	Open in IMG/M
3300004686\|Ga0065173_1000149	Not Available	11439	Open in IMG/M
3300004686\|Ga0065173_1072901	Not Available	619	Open in IMG/M
3300004691\|Ga0065176_1000151	Not Available	5581	Open in IMG/M
3300004691\|Ga0065176_1000783	Not Available	2641	Open in IMG/M
3300004692\|Ga0065171_1001391	All Organisms → cellular organisms → Bacteria → Proteobacteria	3869	Open in IMG/M
3300004692\|Ga0065171_1025961	Not Available	944	Open in IMG/M
3300004805\|Ga0007792_10091169	Not Available	929	Open in IMG/M
3300004806\|Ga0007854_10000378	Not Available	29065	Open in IMG/M
3300006100\|Ga0007806_1053333	Not Available	774	Open in IMG/M
3300006101\|Ga0007810_1046454	Not Available	908	Open in IMG/M
3300006103\|Ga0007813_1076779	Not Available	658	Open in IMG/M
3300006103\|Ga0007813_1087060	Not Available	608	Open in IMG/M
3300006106\|Ga0007833_1029548	Not Available	1039	Open in IMG/M
3300006106\|Ga0007833_1053352	Not Available	738	Open in IMG/M
3300006108\|Ga0007862_1028518	Not Available	1209	Open in IMG/M
3300006129\|Ga0007834_1005134	All Organisms → Viruses → Predicted Viral	3829	Open in IMG/M
3300006129\|Ga0007834_1054022	Not Available	938	Open in IMG/M
3300009154\|Ga0114963_10113103	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1646	Open in IMG/M
3300009182\|Ga0114959_10385194	Not Available	688	Open in IMG/M
3300010157\|Ga0114964_10635615	Not Available	500	Open in IMG/M
3300010885\|Ga0133913_10906532	Not Available	2288	Open in IMG/M
3300010885\|Ga0133913_10926573	All Organisms → Viruses → Predicted Viral	2259	Open in IMG/M
3300013093\|Ga0164296_1057478	Not Available	1820	Open in IMG/M
3300013093\|Ga0164296_1198857	Not Available	775	Open in IMG/M
3300013094\|Ga0164297_10390589	Not Available	532	Open in IMG/M
3300018414\|Ga0194135_10257253	Not Available	1184	Open in IMG/M
3300020682\|Ga0214229_101166	Not Available	4532	Open in IMG/M
3300020685\|Ga0214256_111116	Not Available	755	Open in IMG/M
3300020686\|Ga0214194_106588	Not Available	1075	Open in IMG/M
3300020707\|Ga0214238_1010024	Not Available	1180	Open in IMG/M
3300020710\|Ga0214198_1027400	Not Available	699	Open in IMG/M
3300020716\|Ga0214207_1005803	Not Available	1889	Open in IMG/M
3300020720\|Ga0214252_1012648	Not Available	1215	Open in IMG/M
3300020723\|Ga0214249_1019344	Not Available	1171	Open in IMG/M
3300020723\|Ga0214249_1061308	Not Available	506	Open in IMG/M
3300020733\|Ga0214172_1062156	Not Available	509	Open in IMG/M
3300020735\|Ga0214219_1015989	Not Available	1310	Open in IMG/M
3300021115\|Ga0214174_104971	Not Available	1158	Open in IMG/M
3300021131\|Ga0214206_1013754	Not Available	1083	Open in IMG/M
3300021134\|Ga0214171_1015974	Not Available	1139	Open in IMG/M
3300021136\|Ga0214167_1025095	Not Available	1416	Open in IMG/M
3300021138\|Ga0214164_1035345	All Organisms → Viruses → Predicted Viral	1208	Open in IMG/M
3300021142\|Ga0214192_1048959	Not Available	1317	Open in IMG/M
3300022555\|Ga0212088_10164528	Not Available	1840	Open in IMG/M
3300022555\|Ga0212088_10532105	Not Available	746	Open in IMG/M
3300022602\|Ga0248169_121885	Not Available	3824	Open in IMG/M
3300022602\|Ga0248169_140346	Not Available	2271	Open in IMG/M
3300025328\|Ga0208384_100002	Not Available	22032	Open in IMG/M
3300025336\|Ga0208619_100249	Not Available	3306	Open in IMG/M
3300025336\|Ga0208619_111070	Not Available	660	Open in IMG/M
3300025358\|Ga0208504_1006882	Not Available	1740	Open in IMG/M
3300025358\|Ga0208504_1011247	Not Available	1290	Open in IMG/M
3300025358\|Ga0208504_1018992	Not Available	936	Open in IMG/M
3300025358\|Ga0208504_1036589	Not Available	611	Open in IMG/M
3300025369\|Ga0208382_1002660	All Organisms → Viruses → Predicted Viral	4150	Open in IMG/M
3300025379\|Ga0208738_1000040	Not Available	41153	Open in IMG/M
3300025379\|Ga0208738_1031904	Not Available	799	Open in IMG/M
3300025381\|Ga0208871_1005060	Not Available	2498	Open in IMG/M
3300025382\|Ga0208256_1001066	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5646	Open in IMG/M
3300025387\|Ga0207959_1033896	Not Available	805	Open in IMG/M
3300025400\|Ga0208387_1013405	All Organisms → Viruses → Predicted Viral	1586	Open in IMG/M
3300025400\|Ga0208387_1018859	Not Available	1270	Open in IMG/M
3300025401\|Ga0207955_1062414	Not Available	579	Open in IMG/M
3300025411\|Ga0208865_1053234	Not Available	628	Open in IMG/M
3300025424\|Ga0208617_1026384	All Organisms → Viruses → Predicted Viral	1245	Open in IMG/M
3300025426\|Ga0208739_1026556	Not Available	1008	Open in IMG/M
3300025426\|Ga0208739_1053450	Not Available	652	Open in IMG/M
3300025598\|Ga0208379_1018793	All Organisms → Viruses → Predicted Viral	1977	Open in IMG/M
3300025773\|Ga0208104_1023603	Not Available	758	Open in IMG/M
3300025781\|Ga0208386_1010450	Not Available	1568	Open in IMG/M
3300025781\|Ga0208386_1025332	Not Available	880	Open in IMG/M
3300027708\|Ga0209188_1230720	Not Available	649	Open in IMG/M
3300027741\|Ga0209085_1132362	Not Available	1069	Open in IMG/M
3300027749\|Ga0209084_1047827	Not Available	2075	Open in IMG/M
3300027777\|Ga0209829_10088890	Not Available	1523	Open in IMG/M
3300027896\|Ga0209777_10045945	Not Available	3989	Open in IMG/M
3300027896\|Ga0209777_10089850	Not Available	2642	Open in IMG/M
3300027896\|Ga0209777_10312961	Not Available	1209	Open in IMG/M
3300027896\|Ga0209777_10319915	Not Available	1192	Open in IMG/M
3300027896\|Ga0209777_10344443	Not Available	1137	Open in IMG/M
3300028392\|Ga0304729_1275696	Not Available	500	Open in IMG/M
3300031759\|Ga0316219_1018896	Not Available	3390	Open in IMG/M
3300031759\|Ga0316219_1026461	Not Available	2648	Open in IMG/M
3300032560\|Ga0316223_1214806	Not Available	609	Open in IMG/M
3300032665\|Ga0316221_1040338	Not Available	1967	Open in IMG/M
3300032668\|Ga0316230_1001075	Not Available	31140	Open in IMG/M
3300032668\|Ga0316230_1073045	Not Available	1427	Open in IMG/M
3300032675\|Ga0316225_1026304	Not Available	2486	Open in IMG/M
3300032675\|Ga0316225_1072643	Not Available	1212	Open in IMG/M
3300032675\|Ga0316225_1093639	Not Available	1024	Open in IMG/M
3300032722\|Ga0316231_1363584	Not Available	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	99.19%
Marine	Environmental → Aquatic → Marine	0.81%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	84.55%
Lake	Environmental → Aquatic → Freshwater → Lake	13.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Coastal	Environmental → Aquatic → Marine → Coastal	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	45.53%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	17.89%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	13.82%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	13.01%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	8.13%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	44.72%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	17.89%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	13.01%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.13%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	4.88%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.06%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	3.25%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.63%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.81%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.81%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07	Environmental	Open in IMG/M
3300003809	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300003943	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07	Environmental	Open in IMG/M
3300004095	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004691	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006106	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006129	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300018414	Freshwater sediment microbial communities in response to fracking from North America - Little Laurel Run_MetaG_LLRF_2013	Environmental	Open in IMG/M
3300020682	Freshwater microbial communities from Trout Bog Lake, WI - 14NOV2007 hypolimnion	Environmental	Open in IMG/M
3300020685	Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 hypolimnion	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020707	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020720	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 hypolimnion	Environmental	Open in IMG/M
3300020723	Freshwater microbial communities from Trout Bog Lake, WI - 23JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300020735	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 hypolimnion	Environmental	Open in IMG/M
3300021115	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021134	Freshwater microbial communities from Trout Bog Lake, WI - 02JUL2007 epilimnion	Environmental	Open in IMG/M
3300021136	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 hypolimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300025328	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025336	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025382	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025387	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025400	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025411	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025424	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07 (SPAdes)	Environmental	Open in IMG/M
3300025426	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09 (SPAdes)	Environmental	Open in IMG/M
3300025781	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300032560	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M
3300032722	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0005381	3300000176	Freshwater	KKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNMARAMNQKSSGRGR*
TB03JUN2009E_0025561	3300000176	Freshwater	NINNLGVNMDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTSKAMKAVGRNLARAHNQKAGSK*
TB03JUN2009E_0028212	3300000176	Freshwater	MNKKQVVRIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRNLARAHNQKAGSK*
TB03JUN2009E_0216281	3300000176	Freshwater	MNKKQVVKIADKEAMKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRN
TB18AUG2009E_0013872	3300000203	Freshwater	MXXKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNMARAMNQKSSSRGR*
TBL_comb48_EPIDRAFT_10040131	3300000439	Freshwater	VKIADKEAAKEVHKHEHHMHKGKPVTKLKKGGVTGKEMRAVGRNLARAHNQKAGSK*
TBL_comb48_EPIDRAFT_10447713	3300000439	Freshwater	MDKKQIVKIADKEAAKEVHKHEHHMHKGKPVTKLKKGGVTGKEMRAVGRNLARAHNQKAGSK*
TBL_comb47_HYPODRAFT_100208176	3300000553	Freshwater	MNKKQVVKIADKEAMKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLARVSNQGSKK*
JGI24028J26656_100007224	3300002091	Lentic	MEKKTVKKIADTEIRKHEKHDHPGQKPTKFAKGGVTSLSMKQVGRNLARAHNQKPGSK*
G310J44882_100375331	3300002933	Freshwater	MDKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNMARAMNQKSSGRGR*
G310J44882_100771622	3300002933	Freshwater	MEKKTVKKIADVEIHKHEKHMHKGKKETKLAKGGVTGKAMKAVGRNLARAHNQKPGSK*
G310J44882_101326131	3300002933	Freshwater	MDKKQVTKIADKEAAKEVHKHEKHMHKGAKPTKMAKGGVTSKAMKAVGRNLARAHNQKPGSK*
JGI26470J50227_100053117	3300003375	Freshwater	MEKKTVKKIADQEIXKHEKNMHKGSKPTKFAXGGVTSGEDKALGRNLARVANQGSKK*
JGI26470J50227_10091692	3300003375	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTSKAMKAVGRNLARAHNQKAGSK*
JGI26470J50227_10299753	3300003375	Freshwater	MHNFIKLGANMEKKTVKKIADQEIHKHESHMHKGQKMTKFAKGGVTGQAEKEMGRNLARVANQGSKK*
JGI26470J50227_10573732	3300003375	Freshwater	MDKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNMARAMNQKSSSRGR*
Ga0007811_10094343	3300003787	Freshwater	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGVTSGEDKALGRNLARVANQG
Ga0007846_10009098	3300003797	Freshwater	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGVTSGEDKALGRNLARVANQGSK*
Ga0007846_10026411	3300003797	Freshwater	MDKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRN
Ga0007846_10029933	3300003797	Freshwater	MDKKQVTKIADKEAAKEVHKHEKHMHXGXKPTKMAKGGVTSKAMKAVGRNLARAHNQKPGSK*
Ga0007842_10006293	3300003798	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKLKKGGVTGKEMRAVGRNLARAHNQKAGSK*
Ga0007864_10019222	3300003806	Freshwater	MEKKTVKAIADMEIRKHEKHDHPGQKPTKFAKGGVTGKAMKAVGRNLARAHNQKPGSK*
Ga0007869_10027935	3300003809	Freshwater	MDKKQVTKIADKEAAKEVHKHEHHMHPGKKITKMAKGGVTGKEMKAVGRNMARAMNQKSSGRGR*
Ga0007879_10210253	3300003813	Freshwater	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGLAGVSSEAMKEEGRNMARANNQRGK*
Ga0007879_10277171	3300003813	Freshwater	MDKKQVTKIADKEAAKEVHKHEKHMHQGMKPTKMAKGGVTSKAMKAVGRNLARAHNQKPGSK*
Ga0031655_100204314	3300003852	Freshwater Lake Sediment	MDKKQVTKIADKEAAKEVHKHEHHMHPGKKVTKMAKGGVTGKEMKAVGRNMARAMNQKSSGRGR*
Ga0007808_10053862	3300003943	Freshwater	NLGVNMDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRNLARAHNQKAGSK*
Ga0007829_100733541	3300004095	Freshwater	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGLAAGVSSESMKQEGRNMA
Ga0007829_100999102	3300004095	Freshwater	MNKKQVVKIADKEAMKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLARVANQGSKK*
Ga0066222_12180392	3300004460	Marine	MDKKQVTKIADKEAKKEVHKHEGHMHPGMKPTKMAKGGVTGKAMKAMGRNMARAMNQKSGRGR*
Ga0065168_10006826	3300004684	Freshwater	MEKKTVKKIADQEIHKHESHMHKGQKMTKFAKGGVTGQAEKEMGRNLARVANQGSKK*
Ga0065168_10810362	3300004684	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKALGRNLA
Ga0065173_10001499	3300004686	Freshwater	MEKKTVKKIADQEIHKHESHMHKGSKPTKFAKGGVTSMGEKAVGRNMARVNNQRGR*
Ga0065173_10729012	3300004686	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKALGRNLARAHNQK
Ga0065176_10001515	3300004691	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRNLARAHNQKAGSK*
Ga0065176_10007835	3300004691	Freshwater	MNKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLARVANQGSKK*
Ga0065171_10013912	3300004692	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTSKEMKAVGRNLARAHNQKAGSK*
Ga0065171_10259612	3300004692	Freshwater	MEKKTVKKIADQEIHKHEKNMHKGSKPTKFAKGGVTSGEDKALGRNLARVANQGSKK*
Ga0007792_100911693	3300004805	Freshwater	MDKKTVKNIADKEAAKEVHKHEHHLHKGKPVTKMAKGGITSAQAKAVGRNMARANNQKSGSRGR*
Ga0007854_1000037849	3300004806	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKALGRNLARAHNQKAGSK*
Ga0007806_10533331	3300006100	Freshwater	KKQVTKIADKEAAKEVHKHEKHMHQGMKPTKMAKGGVTSKAMKAVGRNLARAHNQKPGSK
Ga0007810_10464542	3300006101	Freshwater	MNKKQVVRIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKALGRNLARAHNQKAGSK*
Ga0007813_10767792	3300006103	Freshwater	MNKKQVVRIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKALGRNLARAH
Ga0007813_10870601	3300006103	Freshwater	MDKKQVTKIADKEAAKEVHKHEHHMHPGKKITKMAKGGVTGKEMKAVGRNMARA
Ga0007833_10295481	3300006106	Freshwater	KKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLARVANQGSKK*
Ga0007833_10533523	3300006106	Freshwater	MDKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAEGGVTGKAMKAVGRNMARAMNQKSSGRGR*
Ga0007862_10285181	3300006108	Freshwater	MNKKQVVKIADKEAMKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLARVANQ
Ga0007834_10051341	3300006129	Freshwater	MEKKTVKKIADQEIHKHESHMHKGQKMTKFAKGGVTGQAEKEMGRNLARVANQGIKK*
Ga0007834_10540223	3300006129	Freshwater	KHNLGVAMEKKTVKAIADMEIRKHEKHDHPGQKPTKFAKGGVTGKAMKAVGRNLARAHNQKPGSK*
Ga0114963_101131033	3300009154	Freshwater Lake	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGLAAGVSSESMKQEGRNMARANNQGGRK*
Ga0114959_103851942	3300009182	Freshwater Lake	MDKKQVTKIADKEAIKEVHKHEHSMHKGKPVTKMAKGGITSAQAKAVGRNMARANNQKSGSRGR*
Ga0114964_106356152	3300010157	Freshwater Lake	LREDIMEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGLAAGVSSESMKQEGRNMARANNQGGRK*
Ga0133913_109065322	3300010885	Freshwater Lake	MEKKTVKKIADQEIHKHEKNMHKGQMETRLKKGGVAGVSGEAMKQVGRNLARANNQGGR*
Ga0133913_109265733	3300010885	Freshwater Lake	MEKKTVKKIADQEIHKHEKHMHKGKSMTKLAKGGVTSENEKVMGRNMARANNQRGR*
Ga0164296_10574783	3300013093	Freshwater	MDKKEVKSIADKEAAKEVHKHEKHMHKGVKETKLAKGGVTGKAMKAMGRNMARAINQRSAGRGR*
Ga0164296_11988573	3300013093	Freshwater	MDKKEVKHIADVEVHKHEKHMHHGKKTKLAKGGVTGKAMKAVGRNVARANNQKHSSRGR*
Ga0164297_103905892	3300013094	Freshwater	MDKKQVTKIADKEAAKEVHKHEKHMHKGAKPTKMAKGGVTSKAMKAVGRNLARAHNQKSGSK*
Ga0194135_102572533	3300018414	Watersheds	MEKKTVKKIADTEIRKHEKHDHPGQKPTKFAKGGVTSASMKAVGRNLARAHNQKPGSK
Ga0214229_1011667	3300020682	Freshwater	MDKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNMARAMNQKSSSRGR
Ga0214256_1111162	3300020685	Freshwater	MDKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNMARAMNQKSSGRGR
Ga0214194_1065883	3300020686	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTSKAMKAVGRNLARAHNQKAGSK
Ga0214238_10100242	3300020707	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKLKKGGVTGKEMRAVGRNLARAHNQKAGSK
Ga0214198_10274002	3300020710	Freshwater	MNKKQVVKIADKEAMKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLARVSNQGSK
Ga0214207_10058031	3300020716	Freshwater	MDKKQVTKIADKEAAKEVHKHEKHMHKGAKPTKMAKGGVTSKAMKAVGRNL
Ga0214252_10126484	3300020720	Freshwater	MDKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNMAR
Ga0214249_10193443	3300020723	Freshwater	MDKKQVTKIADKEAAKEVHKHEKHMHQGMKPTKMAKGGVTSKAMKAVGRNLARAHNQKPGSK
Ga0214249_10613081	3300020723	Freshwater	RYSNCYNHLGVFMNKKQVVKIADKEAMKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLARVANQGSKK
Ga0214172_10621562	3300020733	Freshwater	MDKKQVTKIADKEAAKEVHKHEKHMHKGAKPTKMAKGGVTSKAMKAVGRNLARAHNQKPGSK
Ga0214219_10159891	3300020735	Freshwater	MDKKQVIKIADKEAAKEVHKHEKNMHKGKKPTKLAKGGVAGVSNESRKALGRNLSRASYQTGG
Ga0214174_1049712	3300021115	Freshwater	MDKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNVARANNQKHSSRGR
Ga0214206_10137543	3300021131	Freshwater	MDKKQIVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTSKAMKAVGRNLARAHNQKAGSK
Ga0214171_10159743	3300021134	Freshwater	MDKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTSKAMKAVGRNLARAHNQKPGSK
Ga0214167_10250951	3300021136	Freshwater	MNKKQVVKIADKEAMKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLAR
Ga0214164_10353453	3300021138	Freshwater	MEKKTVKKIADQEIHKHESHMHKGQKMTKFAKGGVTGQAEKEMGRNLARVANQGSKK
Ga0214192_10489593	3300021142	Freshwater	KIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNMARAMNQKSSSRGR
Ga0212088_101645281	3300022555	Freshwater Lake Hypolimnion	MEKKTVKKIADQEIHKHESHLHKGQKMTKFAKGGVTGQAEKEMGRNLARVANQGSKR
Ga0212088_105321053	3300022555	Freshwater Lake Hypolimnion	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGVAGVSSEAMKEEGRNMARANNQGGRK
Ga0248169_1218854	3300022602	Freshwater	MEKKTVKKIADVEIHKHEKHMHKGKKETKLAKGGVTGKAMKAVGRNLARAHNQKPGSK
Ga0248169_1403465	3300022602	Freshwater	MNKKQVVKIADKEAMKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLARVANQGSK
Ga0208384_1000026	3300025328	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRNLARAHNQKAGSK
Ga0208619_1002493	3300025336	Freshwater	MNKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLARVANQGSK
Ga0208619_1110703	3300025336	Freshwater	QVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRNLARAHNQKAGSK
Ga0208504_10068824	3300025358	Freshwater	KKTVKKIADVEIHKHEKHMHKGKKETKLAKGGVTGKAMKAVGRNLARAHNQKPGSK
Ga0208504_10112471	3300025358	Freshwater	MEKKTVKKIADVEIHKHEKHMHKGKKETKLAKGGVTGKAMKAVGRNLA
Ga0208504_10189923	3300025358	Freshwater	MEKKTVKKIADQEIHKHESHMHKGSKPTKFAKGGVTSMGEKAVGRNMARVNNQRGR
Ga0208504_10365891	3300025358	Freshwater	MDKKQVTKIADKEAKKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKALGRNLARAHNQKAGSK
Ga0208382_10026609	3300025369	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKALGRNLARAHNQKAGSK
Ga0208738_10000408	3300025379	Freshwater	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGVTSGEDKALGRNLARVANQGSK
Ga0208738_10319041	3300025379	Freshwater	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGLAGVSSEAMKEEGRN
Ga0208871_10050602	3300025381	Freshwater	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGLAGVSSEAMKEEGRNMARANNQRGK
Ga0208256_10010667	3300025382	Freshwater	MEKKTVKAIADMEIRKHEKHDHPGQKPTKFAKGGVTGKAMKAVGRNLARAHNQKPGSK
Ga0207959_10338963	3300025387	Freshwater	MNKKQVVKIADKEAMKEVHKHEHHMHKGKPVTKMAKGGVTSGEEKAVGRNLARVANQG
Ga0208387_10134053	3300025400	Freshwater	MDKKQVTKIADKEAAKEVHKHEKHMHQGMKPTKMAKGGVTGKAMKAVGRNMARAMNQKSSGRGR
Ga0208387_10188591	3300025400	Freshwater	MHNFIKLGANMEKKTVKKIADQEIHKHESHMHKGQKMTKFAKGGVTGQAEKEMGRNLARVANQGSKK
Ga0207955_10624142	3300025401	Freshwater	MDKKQVTKIADKEAAKEVHKHEHHMHPGKKITKMAKGGVTGKEMKAVGRNMARAM
Ga0208865_10532341	3300025411	Freshwater	SDWNMHNFIKLGANMEKKTVKKIADQEIHKHESHMHKGQKMTKFAKGGVTGQAEKEMGRNLARVANQGSKK
Ga0208617_10263843	3300025424	Freshwater	MEKKTVKKIADQEIHKHESHMHKGQKMTKFAKGGVTGQAEKEMGRNLARVANQG
Ga0208739_10265561	3300025426	Freshwater	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGLAGVSSEAMKEEGRNMARANNQR
Ga0208739_10534503	3300025426	Freshwater	DKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNMARAMNQKSSGRGR
Ga0208379_10187933	3300025598	Freshwater	MEKKTVKKIADQEIHKHEKNMHKGSKPTKFAKGGVTSGEDKALGRNLARVANQGSKK
Ga0208104_10236033	3300025773	Freshwater	VIMNKKQVVRIADKEAAKEVHKHEKNMHKGKKPTKLAKGGVAGVSNESRKALGRNLSRASYQTGG
Ga0208386_10104501	3300025781	Freshwater	KIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRNLARAHNQKAGSK
Ga0208386_10253322	3300025781	Freshwater	MDKKQIVKIADKEAAKEVHKHEHHMHKGKPVTKLKKGGVTGKEMRAVGRNLARAHNQKAGSK
Ga0209188_12307202	3300027708	Freshwater Lake	MDKKQVTKIADKEAIKEVHKHEHSMHKGKPVTKMAKGGITSAQAKAVGRNMARANNQKSGSRGR
Ga0209085_11323622	3300027741	Freshwater Lake	MEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGLAAGVSSESMKQEGRNMARANNQGGR
Ga0209084_10478273	3300027749	Freshwater Lake	MDKKQVTKIADKEAKKEVHKHEGHMHPGMKPTKMAKGGVTGKAMKAMGRNMARAMNQKSGRGR
Ga0209829_100888902	3300027777	Freshwater Lake	MHNFIKLGTDMEKKTVKKIADQEIHKHEKNMHKGQMETRLKKGGVAGVSGEAMKQVGRNLARANNQGGR
Ga0209777_100459456	3300027896	Freshwater Lake Sediment	MDKKQVIKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTSKAMKAVGRNLARAHNQKAGSK
Ga0209777_100898505	3300027896	Freshwater Lake Sediment	MDKKQVTKIADKEAKKEVHKHEHHMHPGAKPTKMAKGGVTGKAMKAVGRNMARAMNQKSSGRGR
Ga0209777_103129614	3300027896	Freshwater Lake Sediment	MDKKQVTKIADKEAKKEVHKHEHHMHPGMKPTKMAKGGVTGKAMKAVGRNMARVMNQKSSGRGR
Ga0209777_103199151	3300027896	Freshwater Lake Sediment	MDKKQVTKIADKEAAKEVHKHEHHMHPGKKVTKMAKGGVTGKEMRAVGRNMA
Ga0209777_103444433	3300027896	Freshwater Lake Sediment	MEKKTVKKIADTEIRKHEKHDHPGQKPTKLAKGGVTGKAMRAVGRNLARAHNQKGGSK
Ga0304729_12756961	3300028392	Freshwater Lake	LREDIMEKKTVKKIADQEIHKHEKHMHKGAKMTKLAKGGLAAGVSSESMKQEGRNMARANNQGGRK
Ga0316219_10188963	3300031759	Freshwater	MDKKEVKSIADKEAAKEVHKHEKHMHKGVKETKLAKGGVTGKAMKAMGRNMARAINQRSAGRGR
Ga0316219_10264612	3300031759	Freshwater	MDKKEVKHIADVEVHKHEKHMHYGKKTKLAKGGVTGKAMKAVGRNVARANNQKHSSRGR
Ga0316223_12148063	3300032560	Freshwater	ADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRNLARAHNQKAGSK
Ga0316221_10403381	3300032665	Freshwater	NINNLGVIMNKKQVVRIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRNLARAHNQKAGSK
Ga0316230_100107521	3300032668	Freshwater	MDKKEVKHIADVEVHKHEKHMHHGKKTKLAKGGVTGKAMKAVGRNLARAHNQKPGSK
Ga0316230_10730451	3300032668	Freshwater	KIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTSKAMKAVGRNLARAHNQKAGSK
Ga0316225_10263041	3300032675	Freshwater	DKKEVKSIADKEAAKEVHKHEKHMHKGVKETKLAKGGVTGKAMKAMGRNMARAINQRSAGRGR
Ga0316225_10726431	3300032675	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRN
Ga0316225_10936392	3300032675	Freshwater	MDKKQVVRIADKEAAKEVHKHEHHMHKGKPVTKMAKGGVTGKAMKAVGRNLARAHNQKAGSK
Ga0316231_13635842	3300032722	Freshwater	MDKKQVVKIADKEAAKEVHKHEHHMHKGKPVTKLKKGGVTGKEMRAVGRNLAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069614

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences