Metagenome Family F069629

Basic Information
Family ID	F069629
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	71 residues
Representative Sequence	MGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETVARAQFPDRELTRAVTNQCR
Number of Associated Samples	17
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.64 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	11
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Most Common Taxonomy
Group	Unclassified (91.057 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Marine (98.374 % of family members)
Environment Ontology (ENVO)	Unclassified (99.187 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Surface (saline) (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.21% β-sheet: 0.00% Coil/Unstructured: 70.79%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00665	rve	9.09
PF00078	RVT_1	8.26
PF00125	Histone	2.48
PF07727	RVT_2	2.48
PF12796	Ank_2	1.65
PF13637	Ank_4	1.65
PF13359	DDE_Tnp_4	1.65
PF04827	Plant_tran	1.65
PF03184	DDE_1	1.65
PF13358	DDE_3	1.65
PF16198	TruB_C_2	0.83
PF05970	PIF1	0.83
PF00225	Kinesin	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	9.09
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	9.09
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	9.09
COG4584	Transposase	Mobilome: prophages, transposons [X]	9.09
COG0507	ATPase/5Ã¢â‚¬â„¢-3Ã¢â‚¬â„¢ helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
All Organisms	root	All Organisms	5.69 %
Rhodophyta	phylum	Rhodophyta	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
cellular organisms	root	All Organisms → cellular organisms	5.69 %
Bangiophyceae	class	Rhodophyta → Bangiophyceae	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	5.69 %
Bangiales	order	Rhodophyta → Bangiophyceae → Bangiales	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Bangiaceae	family	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae	3.25 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra	genus	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra	3.25 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Spiralia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Lophotrochozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Mollusca	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Bivalvia	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Autobranchia	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Heteroconchia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Euheterodonta	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Imparidentia	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Neoheterodontei	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Venerida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Veneroidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida → Veneroidea	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Veneridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida → Veneroidea → Veneridae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Mercenaria	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida → Veneroidea → Veneridae → Mercenaria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.06 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3.25 %
Mercenaria mercenaria	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida → Veneroidea → Veneridae → Mercenaria → Mercenaria mercenaria	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009072\|Ga0115030_1000612	All Organisms → cellular organisms → Eukaryota	14984	Open in IMG/M
3300009072\|Ga0115030_1001331	All Organisms → cellular organisms → Eukaryota	11151	Open in IMG/M
3300027009\|Ga0209093_1000187	All Organisms → cellular organisms → Eukaryota	31088	Open in IMG/M
3300027009\|Ga0209093_1000443	All Organisms → cellular organisms → Eukaryota	22302	Open in IMG/M
3300027009\|Ga0209093_1000680	All Organisms → cellular organisms → Eukaryota	18904	Open in IMG/M
3300027009\|Ga0209093_1000763	All Organisms → cellular organisms → Eukaryota	17908	Open in IMG/M
3300027009\|Ga0209093_1001493	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	13267	Open in IMG/M
3300027009\|Ga0209093_1002923	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	9238	Open in IMG/M
3300027009\|Ga0209093_1006304	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	5389	Open in IMG/M
3300027028\|Ga0209295_1009675	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida → Veneroidea → Veneridae → Mercenaria → Mercenaria mercenaria	3091	Open in IMG/M
3300027325\|Ga0209186_1008862	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	5948	Open in IMG/M

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	99.19%
Environmental	Environmental	0.81%

Habitat	Taxonomy	Distribution
Algae	Host-Associated → Algae	99.19%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Red Algae	Host-Associated → Algae → Red Algae	99.19%
Marine	Environmental → Aquatic → Marine	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Algae → Red Algae → Unclassified	99.19%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Algae → Red Algae → Unclassified → Unclassified	99.19%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Marine	Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Marine	98.37%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.81%
Porphyra Umbilicalis	Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Porphyra Umbilicalis	0.81%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004791	Porphyra umbilicalis microbial communities from the coast of Maine, USA, in Atlantic Ocean	Host-Associated	Open in IMG/M
3300005647	Marine algae microbial communities from Bantry Bay - Bantry Bay, Ireland	Environmental	Open in IMG/M
3300009072	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male1 metaG	Host-Associated	Open in IMG/M
3300009073	Marine algal microbial communities from Bantry Bay, Ireland - BantryBay_4 metaG	Host-Associated	Open in IMG/M
3300009192	Marine algal microbial communities from Porto, Portugal - Porto_4 metaG	Host-Associated	Open in IMG/M
3300009410	Marine algal microbial communities from Porto, Portugal - Porto_5 metaG	Host-Associated	Open in IMG/M
3300009415	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex1 metaG	Host-Associated	Open in IMG/M
3300009417	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male2 metaG	Host-Associated	Open in IMG/M
3300009421	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex2 metaG	Host-Associated	Open in IMG/M
3300009439	Marine algal microbial communities from Maine, USA - Maine_Asex4_metaG	Host-Associated	Open in IMG/M
3300026840	Marine algal microbial communities from Porto, Portugal - Porto_4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027009	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male1 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027028	Marine algal microbial communities from Porto, Portugal - Porto_5 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027325	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male2 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027509	Marine algal microbial communities from Bantry Bay, Ireland - BantryBay_4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027554	Marine algal microbial communities from Maine, USA - Maine_Asex4_metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027623	Marine algal microbial communities from Maine, USA - Maine_Asex2 metaG (SPAdes)	Host-Associated	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068459_10260813	3300004791	Porphyra Umbilicalis	MYYHTQGAYLSRREVTAAWAARATPASRLEVREVGPIEATRHEDTVSLPASTVPLTVVVALCTKRAETVTEA*
Ga0079203_11619481	3300005647	Marine	MGLEVREVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETVARAQFPEWELTRAVANQCR*
Ga0115030_10005987	3300009072	Marine	VTAVSGADATPAMGLEVREAVPIETKRHEDTVHFPETTVPPTVVSSRPQKAEAVARAQCSEWNLARAVTNQCR*
Ga0115030_100061216	3300009072	Marine	MRGVHLSRREVTAVWAARATPAMGLEVQEVVPIETPRHEDTVYLPATTVPPTVVALRPERAETAARVGETP*
Ga0115030_10013317	3300009072	Marine	VSAARATPAMGLEVREVRPIEAPRHEDTVYFPATTVPPTVVALRPKRAETITRAEFPEWEVTRAVAKRCR*
Ga0115030_10017177	3300009072	Marine	MGLEVQEVGPIEMPRHENTVYLPATTVPPTVAALRPKRAESVARAQFPDRDLTRAVTNQCR*
Ga0115030_100209112	3300009072	Marine	MGLEVQEVGLIETPRHEDTFYFPATTVPPTVVARRPKREETVARAQFPD*
Ga0115030_10025148	3300009072	Marine	MRLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRRKREETVAWAQFPDRDLARAVTNQCR*
Ga0115030_10044313	3300009072	Marine	MEHHDQRGYLSRREGTAVSAARATLAMGLEVQEVGPIETPRHEDTVYLPATPVPPTVVALRLKTGETVARAQFPDRDLTRAVTNQCR*
Ga0115030_10053269	3300009072	Marine	MGLEVQEVGPIETPRHEDPVYLPVTTVPPTVVALRPRRAETVARAQFADRDLSRAVTNQCR*
Ga0115030_10056992	3300009072	Marine	VRAVSAARATLATGLEVQKVGPIETPRHEDTVYFPATTMHPTVVALRPKRAETVARDQFPDWELTRADAKKCR*
Ga0115030_10074207	3300009072	Marine	MAVSVPCATPAMGLGVREVGPIETPRHEDTVYFPATTVPPTVVALRHKRAETVSRAQFHDGEMTRAVTNQCK*
Ga0115030_10076304	3300009072	Marine	MGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETVARAQFPDRELTRAVTNQCR*
Ga0115030_10080331	3300009072	Marine	MREETAVSAARATLAMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRLKTEETVARAQFPDRDLTRAVTNQCR*
Ga0115030_10083112	3300009072	Marine	MKYHDQGDYLLRREVTAFQAARATPAMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRAEPVARAHFPDEDLARAVTNQCR*
Ga0115030_10083431	3300009072	Marine	MGLEAQEVGPIETPRHEDTVYMPATTVPPTVVALRPKRAETVARAQFPDWKLTPAVTNQCR*
Ga0115030_10102521	3300009072	Marine	MTVSGARATPAMGLEVQEVGPIETPRYEDTVYLPATTVPPTVVALRPKRAETVARSKIPDRDLTRAVTNQCR*
Ga0115030_10124934	3300009072	Marine	MGLEIQEVGPIEAPRQEDTVYLPATTVPPTVVALRPKRAETVARAQFPDRDLTRAVTNQCR*
Ga0115030_10144592	3300009072	Marine	MYDHNQGGYLSRREVTASWAARATPAMGLEVQEVGPIETPRHEDTLYLPATTVPPTVVALRPKRAETVARAQFPDGDLTRAVTNQCR*
Ga0115030_10145864	3300009072	Marine	MEYHDQGGYLGRREVTAVCAARATPAMGLEVQEVGPIEMPRHEDTVYLPATTVPPTVVALRPKRAETVARAPFPDMDLTRAVTNQCR*
Ga0115030_10600791	3300009072	Marine	MSYHDQGGYLSRREVKAVQAARATPAMGLEVQETGPIETPRQEDKVYLPATTVPPTVVALRTKRAETAARAQFPDRDLTRAVTNQCR*
Ga0115030_10696921	3300009072	Marine	MRKVTAVWDARATPAMGLEVQEVGPIEMPRHEDTVYLPATTVPPTVVSLRPKRAEAVARARFPDGDLTRAFTNQCR*
Ga0115030_11095331	3300009072	Marine	MGREVQEVGPIETPRQEDTVYLPATTVPPTVVALCPKWAETVARAQFPDRDLTQAVTNQCR*
Ga0114957_10119526	3300009073	Marine	RATPAMGLEVREVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETVARAQFPEWELTRAVANQCR*
Ga0114954_10238532	3300009192	Marine	MGLVVQEVGQIEAPRHEYTVYFPATTVPPTVVAIRSKRAETVARAHFPDWELTRETTNQSG*
Ga0114954_10529821	3300009192	Marine	MEYDMKYHDQGDYLLRREVTVFQAARATPAMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETVARAHFPDEDLARAVTNQCR*
Ga0114954_10545881	3300009192	Marine	MGLEVQEVGTIETPRHKDTIYLPATTVPPTVVALRPKRAETVAQAQFPDRDLARAVTNLCR*
Ga0114954_10618901	3300009192	Marine	MEYHDQRGYLSRREGTAVSAARATLAMGLEVQEVGPIETPTHEDTVYLPATTVPPTVVALRLKTEETVARAQFPDTDLTRAVTNQCR*
Ga0114955_10003421	3300009410	Marine	SRREGTAVSAARATPAMGLEVQEVGPIETPRHEDTVYWPATMVPSTVVDLRPKRAETVARAQFPDRDLTRAVTNQCR*
Ga0114955_10009906	3300009410	Marine	MGIEVQEVVSIETPGHEDTVYLPATTVPPTVVAIRPKRAETVSRAQFPDWELTRAVTN*
Ga0114955_10067924	3300009410	Marine	MGLEVQEVGPIEAPRHEYTVYFPATTVPPTVVAIRSKRAETVARAHFPDWELTRETTNQSG*
Ga0114955_10093727	3300009410	Marine	MACWAASATPAMGLEVQEVRPIEAPRQEDTVYLPATTLPPTVVDFRLKRAETVSWTRFPDWKLTRAVGNQCR*
Ga0114955_10120871	3300009410	Marine	MREVTAVSAARATLAMGLEVQEVGPIETPTHEDTVYLPATTVPPTVVALRLKTEETVARAQFPDRDLPRAVTNQCR*
Ga0114955_10188712	3300009410	Marine	MGLEVQKVGPIETPRQEDTVYFPATTVSPTVVALRPRRAETVARAQFPDMDLTRAVTNQCK*
Ga0114955_10226382	3300009410	Marine	MGLEVQEVGPIETPRHEDTVYLPATTVPPTVFALRLIRAETVARAQFPDRDLTRAITNQCR*
Ga0114955_10239081	3300009410	Marine	MKYDAPGGYLSRREVTAVWAARATPAMGLEVQEVGPIETPIHEDTVYLPATTVPPTVVALRPKRAETAARAQFPDRDLTRAVTNQCR*
Ga0114955_10277741	3300009410	Marine	MEYHDQGGYLSRREVMAVCAARATPAMGLEVQEVGPIEMPRHEDTVYLPATTVPPTVVALRPKRAETVARAQFPDRDLT
Ga0114955_10308972	3300009410	Marine	MTVSGARATPAMGLEVQEVGPIETPRYEDTVYLPATTVPPTVVALRPKRAETVARAKIPDRDLTRAVTNQCR*
Ga0114955_10316441	3300009410	Marine	MSYHDQGGYLSRREVRAVQAACATPAMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRTETAARAQFPDGNLTRAVTHQCR*
Ga0114955_10350383	3300009410	Marine	AMGLEVQEVGPIETPRHEDKVYLPATTVPPTVVALRPKRAETVARAQFPDRDLTRAVTNQCR*
Ga0114955_10423281	3300009410	Marine	MGLEIQEVGPIEAPRQEDTVYLPATTVPPTVVALRPKRAETVARAQFPDRDLTRAVT
Ga0114955_10815031	3300009410	Marine	MRGIYLSRREVTAVWAVRATPAMGLEVQEVGPIETRRSEDTVYLPATTVPPTVVALRPKRAETVARAQFPDRDLTRAVTNQC
Ga0115029_10144172	3300009415	Marine	MYYHTQGAYLSRREVTTAWAARATPASRLEVREGGPIEATRHEDTVSLPALTVPLTFVVALCPKRAATVTED*
Ga0114953_10033384	3300009417	Marine	MACWAASATPAMGLEVQEVRPIEAPRQEDTVYLPATTLPPTVVDFRLKRAETVSWTRFPDWELTRAVGNQCR*
Ga0114953_100337515	3300009417	Marine	MGLEVQEVGPIEAPRHEDTVYLPATTVTPTVVALRPKRAETVARDQFSDWKLTRAVTNQCR*
Ga0114953_10036143	3300009417	Marine	VTAVWAAHATPAIGLEVQEVGPIETPRHEDTVYFPATTVPPTVVALRPKRAETVARAQFPDRDLTRAVTNQCR*
Ga0114953_10052325	3300009417	Marine	MGLEIQEVGPIEAPRHEYKVYFPATTVPPTVVAIRYKRAETVARAHFPDWELTRESTN*
Ga0114953_10099535	3300009417	Marine	VTAVRAPRATTALGLEVQEVGPMETQRHEDTVYLPATTVPPTVVALRPKRAETVARAQFSDAELTRAVTNQCS*
Ga0114953_10113158	3300009417	Marine	MYDHNQGGYLSRREVTASWAARATPAMGREVQEVGPIETPRHEDTLYLPATTVPPTVVALRPKRAETVARAQFPDGDLTRAVTNQCR*
Ga0114953_10120368	3300009417	Marine	MGLEVQEVGPIETPRHEDTVFLLATTVRPTVVALHPMRAETVARAQFPHWELTRAVTIQCR*
Ga0114953_10149684	3300009417	Marine	MGLEVQEVGPIETPRHEDTVYFPATTVPPTVVALRPKMAETAARARFPDMDLTRAVTNQCR*
Ga0114953_10155944	3300009417	Marine	MEYHDQRGYLSRREGTAVSAARATLAMGLEVQEVGPIETPRHEDTVYLPATPVPPTVVALRLKTEETVARAQFPDRDLTRAVTNQCR*
Ga0114953_10177791	3300009417	Marine	TAVWAARATPAMGLEVQEVGPIETPRHEDTVYLPATTVPPTLVALRPKRAETVARARFPERELTRAVTNQCR*
Ga0114953_10179174	3300009417	Marine	MGLEVQEIGPIETPRREDTVYLPATTVPPTVVALRPKKAETVARAQFPDRDLTRAVTNQCR*
Ga0114953_10180024	3300009417	Marine	LLYHDQGDYLRRSEVTAVQAARATPALGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPERAETVARAQFPDRDLARAVTNQCR*
Ga0114953_10260304	3300009417	Marine	MGLEIQEVGPIEAPRQEDTVYLPATTVPPTVVALRPKRAETVARAQFTDRDLTRAVTNQCR*
Ga0114953_10268021	3300009417	Marine	VQAARATPAMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVTLRPKRAETAARAQFPDKDLTPAVTNQCR*
Ga0114953_10869992	3300009417	Marine	MRGIYLSRREVTAVWAVRATPAMGLEVQEVGPIETPRFEDTVYLPATTVPPTVVALRPKRAETVARAQFPDRDLTRAV
Ga0114953_10944991	3300009417	Marine	ARATPAMGLEVQEVGPIETPRQEDTVYLPATTVPPTVVALRPKRSETVPRAQFPDRDLTRAVTNQCK*
Ga0114953_11288222	3300009417	Marine	MEYHDQGGYLSRREVTAVCAARATPAMGLEVQEVGPIEMPRHEDTLYLPATTVPPTVVALRPKRAETVARAQFPDRNLTRAVTNQCR*
Ga0114953_11642442	3300009417	Marine	MEYHDQGGYLSRREVTAVWAAGATPATGLEVQEVGPIEMPRHEDTVYLPATTVPPTVVALRPKRAETVARAQF
Ga0114952_11091871	3300009421	Marine	MGLEVREVRPIKTPRHDDTVYLPATTVPPTVVALRPKRAETVARAQFP
Ga0115031_10807981	3300009439	Marine	GYLGRREVTAVSAARATPAMGLEVREVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETVARAQFPEWELTRAVANECS*
Ga0209595_1195742	3300026840	Marine	MGLEVQEVGPIEAPRHEYTVYFPATTVPPTVVAIRSKRAETVARAHFPDWELTRETTNQS
Ga0209595_1254301	3300026840	Marine	LRRREVTAVWAARATPALGLEVQEVRPIETPRHEDTVYLPATTVPPTVVALRPKRAESAARAEFPDRDLTRAVTNQCR
Ga0209093_100018737	3300027009	Marine	VSAARATPAMGLEVREVRPIEAPRHEDTVYFPATTVPPTVVALRPKRAETITRAEFPEWEVTRAVAKRCR
Ga0209093_100044310	3300027009	Marine	MGLEVQEVGPIETPRHEDTVYFPATTVPPTVVALRPKRAKTVARAQFPDRNLTRAVTNQC
Ga0209093_10004855	3300027009	Marine	MREVTAVYAARATPAMGLEVQEVGPIEAPRHEYTVYFPATTVPPTVVAIRSKRAETVARAHFPDWELTRETTNQSG
Ga0209093_100054310	3300027009	Marine	MGLEVQEVGPIETPRHEDTVYFPATTVPPTVVALRPKMAETAARARFPDMDLTRAVTNQC
Ga0209093_100054323	3300027009	Marine	MGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETAARAQFPDRDLTRAVTNQC
Ga0209093_100054410	3300027009	Marine	VTAVSAARATPALGLEVQEVEPIETPRHEDTVFFPATTVPPTVVALRPKRAEIVARAQFPDRDLTRGFGIRHFMLH
Ga0209093_100054517	3300027009	Marine	VTAVSGADATPAMGLEVREAVPIETKRHEDTVHFPETTVPPTVVSSRPQKAEAVARAQCSEWNLARAVTNQCR
Ga0209093_100068012	3300027009	Marine	MSYHDQGGYLSRREVKAVQAARATPAMGLEVQETGPIETPRQEDKVYLPATTVPPTVVALRTKRAETAARAQFPDRDLTRAVTNQCR
Ga0209093_10007631	3300027009	Marine	MRGVHLSRREVTAVWAARATPAMGLEVQEVVPIETPRHEDTVYLPATTVPPTVVALRPERAETAARVGETP
Ga0209093_100099615	3300027009	Marine	MQYHDQGGYVIRREVTAVWAARATHVMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVTLRPKRAETVARAQFSDRVLTRAVTNQCR
Ga0209093_10009964	3300027009	Marine	MGLEVQEVGPIETPRHEDTVYLPATTVPPTVVTLRPKRAETVARAQFSDRVLTRAVTNQC
Ga0209093_100100219	3300027009	Marine	MACWAASATPAMGLEVQEVRPIEAPRQEDTVYLPATTLPPTVVDFRLKRAETVSWTRFPDWELTRAVGNQCR
Ga0209093_100103020	3300027009	Marine	VRAVSAARATLATGLEVQKVGPIETPRHEDTVYFPATTMHPTVVALRPKRAETVARDQFPDWELTRADAKKCR
Ga0209093_10014933	3300027009	Marine	MTVSGARATPAMGLEVQEVGPIETPRYEDTVYLPATTVPPTVVALRPKRAETVARSKIPDRDLTRAVTNQCR
Ga0209093_10020228	3300027009	Marine	MREETAVSAARATLAMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRLKTEETVARAQFPDRDLTRAVTNQCR
Ga0209093_100237811	3300027009	Marine	MGLEVQEVGPIETARHEDTVYWLATTVPPTVVALRPKRAETVARAQFPDRDLARAVTNQC
Ga0209093_10025887	3300027009	Marine	MGLEVQEVGPIEMPRHENTVYLPATTVPPTVAALRPKRAESVARAQFPDRDLTRAVTNQC
Ga0209093_100292313	3300027009	Marine	MGLEVQEVGLIETPRHEDTFYFPATTVPPTVVARRPKREETVARAQFPD
Ga0209093_10057211	3300027009	Marine	MEYHDQGGYLGRREVTAVCAARATPAMGLEVQEVGPIEMPRHEDTVYLPATTVPPTVVALRPKRAETVARAPFPDMDLTRAVTNQCR
Ga0209093_10063046	3300027009	Marine	MGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETVARAQFPDRDLARAVTNQC
Ga0209093_10063604	3300027009	Marine	MKYHDQGDYLLRREVTAFQAARATPAMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRAEPVARAHFPDEDLARAVTNQCR
Ga0209093_10067521	3300027009	Marine	MGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKMTETVARAQFPDRDLTRVVTNKC
Ga0209093_10068955	3300027009	Marine	MYDHNQGGYLSRREVTASWAARATPAMGLEVQEVGPIETPRHEDTLYLPATTVPPTVVALRPKRAETVARAQFPDGDLTRAVTNQCR
Ga0209093_10083212	3300027009	Marine	MAVSVPCATPAMGLGVREVGPIETPRHEDTVYFPATTVPPTVVALRHKRAETVSRAQFHDGEMTRAVTNQCK
Ga0209093_10091042	3300027009	Marine	MRKVTAVWDARATPAMGLEVQEVGPIEMPRHEDTVYLPATTVPPTVVSLRPKRAEAVARARFPDGDLTRAFTNQCR
Ga0209093_10092795	3300027009	Marine	MGLEAQEVGPIETPRHEDTVYMPATTVPPTVVALRPKRAETVARAQFPDWKLTPAVTNQC
Ga0209295_100051113	3300027028	Marine	MGIEVQEVVSIETPGHEDTVYLPATTVPPTVVAIRPKRAETVSRAQFPDWELTRAVTN
Ga0209295_100106914	3300027028	Marine	RREGTAVSAARATPAMGLEVQEVGPIETPRHEDTVYWPATMVPSTVVDLRPKRAETVARAQFPDRDLTRAVTNQCR
Ga0209295_10033116	3300027028	Marine	MGLEVQEVGPIETPRHKDTVHLLATTVPPTVVALCPKRAETVARAQFSDWELTRAVTKQ
Ga0209295_10087176	3300027028	Marine	MGLEVEEVGPIETPRYEDAVHLPATTVPPTVVALRPKRAETVARAQFLDRDLTQAVINQC
Ga0209295_10096755	3300027028	Marine	MGLEVQEVGPIETARHEDTVYLPATTVPPTVVALRPKRAETVARAQFPDRDLARAVTNQC
Ga0209295_10184513	3300027028	Marine	MREVTAVSAARATLAMGLEVQEVGPIETPTHEDTVYLPATTVPPTVVALRLKTEETVARAQFPDRDLPRAVTNQCR
Ga0209295_10254651	3300027028	Marine	MSYHDQGGYLSRREVRAVQAACATPAMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRTETAARAQFPDGNLTRAVTHQCR
Ga0209295_10288211	3300027028	Marine	YHDRGGYLSRRELTAVWAARATPAMGLEVQKVGPIETPRQEDTVYFPATTVSPTVVALRPRRAETVARAQFPDMDLTRAVTNQCK
Ga0209295_10315392	3300027028	Marine	HDQGGYLSRREVTAVWAARATPAMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETVARAQFPDRDLNRAVTNQCR
Ga0209295_10369992	3300027028	Marine	MKYDAPGGYLSRREVTAVWAARATPAMGLEVQEVGPIETPIHEDTVYLPATTVPPTVVALRPKRAETAARAQFPDRDLTRAVTNQCR
Ga0209295_10374971	3300027028	Marine	MKYHDQGDYLLRREVTVFQAARATPAMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETVARAHFPDEDLARAVTNQCR
Ga0209295_10454061	3300027028	Marine	MTVSGARATPAMGLEVQEVGPIETPRYEDTVYLPATTVPPTVVALRPKRAETVARAKIPDRDLTRAVTNQCR
Ga0209295_10607241	3300027028	Marine	MGLQVQEVGPIETPRHEDMVSLPATTVPPSVVALRPKRPETVARAQFPDRNLARAVT
Ga0209186_10008018	3300027325	Marine	MREVTAVYAARATPAMGLEIQEVGPIEAPRHEYKVYFPATTVPPTVVAIRYKRAETVARAHFPDWELTRESTN
Ga0209186_10027388	3300027325	Marine	VTAVWAAHATPAIGLEVQEVGPIETPRHEDTVYFPATTVPPTVVALRPKRAETVARAQFPDRDLTRAVTNQCR
Ga0209186_100386710	3300027325	Marine	VTAVSAARATPAMGLEVQEVEPIETPRHEDTVFFPATTVPPTVVALRPKRAEIVARAQFPDRDLTRGFGIRHFMLH
Ga0209186_10040195	3300027325	Marine	MGLEVQEVGPIETPRHEDTVYLPATTMPPIVVALRPKRAETVARAQFPDRDLAQAVTNQC
Ga0209186_100458213	3300027325	Marine	VTAVRAPRATTALGLEVQEVGPMETQRHEDTVYLPATTVPPTVVALRPKRAETVARAQFSDAELTRAVTNQCS
Ga0209186_10055409	3300027325	Marine	MRLEVQEVGPIETPRHEDTVYLPATTVPPTVVALRRKREETVAWAQFPDRDLARAVTNQC
Ga0209186_10056184	3300027325	Marine	MGLEVHEVRPIETPRHEDTVYLPATTVPPTVVALRPERADTVARAQFPDRDLAGAVTN
Ga0209186_10062848	3300027325	Marine	MYDHNQGGYLSRREVTASWAARATPAMGREVQEVGPIETPRHEDTLYLPATTVPPTVVALRPKRAETVARAQFPDGDLTRAVTNQCR
Ga0209186_10088625	3300027325	Marine	MQYHDQGGYLSRREVTAVWASRATHVMGLEVQEVGPIETPRHEDTVYLPATTVPPTVVTLRPKRAETVARAQFSDRVLTRAVPNQCR
Ga0209186_10105172	3300027325	Marine	VWPSGSLDTRPSGLSHALPLVLYHDQWGFLSRREVTAVRAARATPVMGLEVQEVGPIETPRQQDTVYLPATTVPPTVVALRPKRAETVARAQFPDKELTRAVTNQCR
Ga0209186_10193263	3300027325	Marine	MRLEVQEVGQIETPRHEVTVYLPATTVPPTVVALRPKREETVAWAQFPDRDLARAVTNQC
Ga0209186_10194413	3300027325	Marine	MGLEVQEVGPIETPKHEDTVYLPAPTVPPTVVALRHIRAETVARAQFPDRDLTRAITNQC
Ga0209186_10201371	3300027325	Marine	MGPEVQEVGPIEAPRHEDTVYLPATTVSPTVFALRPERAETVARAQFPDRDLTRAVTNQC
Ga0209186_10234664	3300027325	Marine	MGLEIQEVGPIEAPRQEDTVYLPATTVPPTVVALRPKRAETVARAQFTDRDLTRAVTNQC
Ga0209186_10909031	3300027325	Marine	MEYHDQGGYLSRREVTAVCAARATPAMGLEVQEVGPIEMPRHEDTLYLPATTVPPTVVALRPKRAETVARAQFPDRNLTRAVTNQCR
Ga0209187_10061051	3300027509	Marine	MYYHTQGAYLSRREVTAAWAARATPASRLEVREVGPIEATRHEDTVSLPASTVPLTVVVALCTKRAETVTEA
Ga0209187_10089491	3300027509	Marine	AARATPAMGLEVREVGPIETPRHEDTVYLPATTVPPTVVALRPKRAETVARAQFPEWELTRAVANQCR
Ga0209831_10078696	3300027554	Marine	MSYHNQGSDIREREVAAVWAARATPAIGLQVQEVGPIETPRHEDTVTLPATMVPPTVVALRPKRVETVARAQFP
Ga0209828_10444133	3300027623	Marine	MQYNNQGGFLRRREVTAVRAARATPAMGLEVREVGPIETPRHEDTVHLPATTVPPTVIALRAEWPRTVAQAKNPEMGIDPGRHQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069629

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign