Metagenome / Metatranscriptome Family F069699

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F069699
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	46 residues
Representative Sequence	MIIKAYRQELRDFINNNEIKILAGEKVEFPKQPDFIDLNIIY
Number of Associated Samples	73
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.82 %
% of genes near scaffold ends (potentially truncated)	88.62 %
% of genes from short scaffolds (< 2000 bps)	95.93 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (69.919 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (50.407 % of family members)
Environment Ontology (ENVO)	Unclassified (73.984 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (47.967 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.29% β-sheet: 0.00% Coil/Unstructured: 65.71%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF13884	Peptidase_S74	0.81
PF02178	AT_hook	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.92 %
All Organisms	root	All Organisms	30.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.92 %
cellular organisms	root	All Organisms → cellular organisms	30.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	30.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.92 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	30.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.92 %
Cryptomonadales	order	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales	30.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.92 %
Cryptomonadaceae	family	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae	30.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.92 %
Cryptomonas	genus	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas	30.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.92 %
Cryptomonas curvata	species	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	30.08 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352005\|2199975675	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	999	Open in IMG/M
3300000052\|Draft_c002063	Not Available	765	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10064583	Not Available	2078	Open in IMG/M
3300002369\|B570J29640_105804	Not Available	596	Open in IMG/M
3300002370\|B570J29631_107179	Not Available	580	Open in IMG/M
3300002379\|B570J29633_102622	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	958	Open in IMG/M
3300002408\|B570J29032_109074636	Not Available	586	Open in IMG/M
3300002408\|B570J29032_109231539	Not Available	646	Open in IMG/M
3300002408\|B570J29032_109770906	Not Available	1267	Open in IMG/M
3300003860\|Ga0031658_1057790	Not Available	675	Open in IMG/M
3300007636\|Ga0102856_1041473	Not Available	715	Open in IMG/M
3300007955\|Ga0105740_1066336	Not Available	595	Open in IMG/M
3300008108\|Ga0114341_10256831	Not Available	937	Open in IMG/M
3300008111\|Ga0114344_1082898	Not Available	1187	Open in IMG/M
3300008117\|Ga0114351_1424461	Not Available	550	Open in IMG/M
3300008120\|Ga0114355_1196830	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	654	Open in IMG/M
3300009068\|Ga0114973_10520617	Not Available	615	Open in IMG/M
3300009154\|Ga0114963_10285297	Not Available	924	Open in IMG/M
3300009181\|Ga0114969_10207274	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1200	Open in IMG/M
3300009181\|Ga0114969_10539783	Not Available	647	Open in IMG/M
3300009187\|Ga0114972_10640889	Not Available	590	Open in IMG/M
3300010388\|Ga0136551_1060737	Not Available	682	Open in IMG/M
3300010970\|Ga0137575_10032725	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	833	Open in IMG/M
3300012715\|Ga0157599_1094253	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	895	Open in IMG/M
3300012719\|Ga0157600_1126974	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	853	Open in IMG/M
3300012725\|Ga0157610_1272464	Not Available	662	Open in IMG/M
3300012726\|Ga0157597_1137244	Not Available	876	Open in IMG/M
3300012730\|Ga0157602_1099454	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	910	Open in IMG/M
3300013004\|Ga0164293_10413660	Not Available	905	Open in IMG/M
3300013004\|Ga0164293_10725523	Not Available	635	Open in IMG/M
3300013004\|Ga0164293_10739856	Not Available	627	Open in IMG/M
3300013004\|Ga0164293_10999469	Not Available	522	Open in IMG/M
3300013005\|Ga0164292_10123980	Not Available	1919	Open in IMG/M
3300013005\|Ga0164292_10311240	Not Available	1074	Open in IMG/M
3300013005\|Ga0164292_10402920	Not Available	913	Open in IMG/M
3300013005\|Ga0164292_10927855	Not Available	545	Open in IMG/M
3300013006\|Ga0164294_10349794	Not Available	1018	Open in IMG/M
3300013295\|Ga0170791_12468236	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	518	Open in IMG/M
3300013295\|Ga0170791_13790299	Not Available	511	Open in IMG/M
3300013295\|Ga0170791_15410981	Not Available	1035	Open in IMG/M
3300020160\|Ga0211733_10977609	Not Available	604	Open in IMG/M
3300020162\|Ga0211735_10048772	Not Available	1281	Open in IMG/M
3300020172\|Ga0211729_10266535	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1039	Open in IMG/M
3300020172\|Ga0211729_11053318	Not Available	884	Open in IMG/M
3300020493\|Ga0208591_1013608	Not Available	1106	Open in IMG/M
3300020502\|Ga0208087_1034835	Not Available	615	Open in IMG/M
3300020520\|Ga0208481_1009847	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1698	Open in IMG/M
3300020528\|Ga0208224_1007500	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1766	Open in IMG/M
3300020543\|Ga0208089_1018608	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1021	Open in IMG/M
3300020558\|Ga0208362_1011948	Not Available	1785	Open in IMG/M
3300020558\|Ga0208362_1018775	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1306	Open in IMG/M
3300020565\|Ga0208718_1023707	Not Available	1239	Open in IMG/M
3300021108\|Ga0214162_1040322	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	794	Open in IMG/M
3300021108\|Ga0214162_1045043	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	743	Open in IMG/M
3300027254\|Ga0208177_1052146	Not Available	771	Open in IMG/M
3300027683\|Ga0209392_1164925	Not Available	685	Open in IMG/M
3300027797\|Ga0209107_10093612	Not Available	1620	Open in IMG/M
3300027804\|Ga0209358_10504489	Not Available	549	Open in IMG/M
3300027804\|Ga0209358_10541249	Not Available	522	Open in IMG/M
3300027836\|Ga0209230_10304653	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	918	Open in IMG/M
3300028027\|Ga0247722_10003475	Not Available	7831	Open in IMG/M
3300028027\|Ga0247722_10099756	Not Available	1075	Open in IMG/M
3300028027\|Ga0247722_10131906	Not Available	908	Open in IMG/M
3300031784\|Ga0315899_10429667	Not Available	1279	Open in IMG/M
3300031784\|Ga0315899_10654568	Not Available	983	Open in IMG/M
3300031784\|Ga0315899_10763712	Not Available	889	Open in IMG/M
3300031784\|Ga0315899_11470378	Not Available	573	Open in IMG/M
3300031786\|Ga0315908_10184078	Not Available	1728	Open in IMG/M
3300031786\|Ga0315908_11367856	Not Available	556	Open in IMG/M
3300031857\|Ga0315909_10468904	Not Available	880	Open in IMG/M
3300032050\|Ga0315906_10767352	Not Available	762	Open in IMG/M
3300032050\|Ga0315906_11309414	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	516	Open in IMG/M
3300032092\|Ga0315905_10767838	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	844	Open in IMG/M
3300032093\|Ga0315902_10947206	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	655	Open in IMG/M
3300033979\|Ga0334978_0133780	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1244	Open in IMG/M
3300033981\|Ga0334982_0237527	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	882	Open in IMG/M
3300033996\|Ga0334979_0110812	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1698	Open in IMG/M
3300033996\|Ga0334979_0259765	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1000	Open in IMG/M
3300034019\|Ga0334998_0150435	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1492	Open in IMG/M
3300034022\|Ga0335005_0045414	Not Available	2982	Open in IMG/M
3300034022\|Ga0335005_0177065	Not Available	1337	Open in IMG/M
3300034023\|Ga0335021_0367304	Not Available	757	Open in IMG/M
3300034023\|Ga0335021_0449503	Not Available	663	Open in IMG/M
3300034050\|Ga0335023_0170636	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1229	Open in IMG/M
3300034050\|Ga0335023_0197761	Not Available	1125	Open in IMG/M
3300034050\|Ga0335023_0474231	Not Available	651	Open in IMG/M
3300034051\|Ga0335024_0120098	Not Available	1449	Open in IMG/M
3300034051\|Ga0335024_0141113	Not Available	1316	Open in IMG/M
3300034051\|Ga0335024_0141614	Not Available	1313	Open in IMG/M
3300034051\|Ga0335024_0475256	Not Available	613	Open in IMG/M
3300034051\|Ga0335024_0484834	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	605	Open in IMG/M
3300034051\|Ga0335024_0610067	Not Available	521	Open in IMG/M
3300034060\|Ga0334983_0228793	Not Available	1140	Open in IMG/M
3300034060\|Ga0334983_0314700	Not Available	931	Open in IMG/M
3300034060\|Ga0334983_0373480	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	830	Open in IMG/M
3300034060\|Ga0334983_0457648	Not Available	723	Open in IMG/M
3300034060\|Ga0334983_0781915	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	500	Open in IMG/M
3300034064\|Ga0335001_0443175	Not Available	693	Open in IMG/M
3300034066\|Ga0335019_0439140	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	790	Open in IMG/M
3300034103\|Ga0335030_0369736	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	939	Open in IMG/M
3300034105\|Ga0335035_0097188	Not Available	1900	Open in IMG/M
3300034105\|Ga0335035_0581416	Not Available	597	Open in IMG/M
3300034107\|Ga0335037_0061373	Not Available	2027	Open in IMG/M
3300034107\|Ga0335037_0132913	Not Available	1357	Open in IMG/M
3300034107\|Ga0335037_0274080	Not Available	920	Open in IMG/M
3300034107\|Ga0335037_0369000	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	777	Open in IMG/M
3300034107\|Ga0335037_0429269	Not Available	711	Open in IMG/M
3300034107\|Ga0335037_0506825	Not Available	644	Open in IMG/M
3300034107\|Ga0335037_0544204	Not Available	617	Open in IMG/M
3300034112\|Ga0335066_0293829	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	922	Open in IMG/M
3300034116\|Ga0335068_0123318	Not Available	1429	Open in IMG/M
3300034116\|Ga0335068_0151922	Not Available	1250	Open in IMG/M
3300034116\|Ga0335068_0161153	Not Available	1204	Open in IMG/M
3300034116\|Ga0335068_0282354	Not Available	834	Open in IMG/M
3300034116\|Ga0335068_0452885	Not Available	603	Open in IMG/M
3300034116\|Ga0335068_0453408	Not Available	603	Open in IMG/M
3300034116\|Ga0335068_0555756	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	523	Open in IMG/M
3300034119\|Ga0335054_0434694	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	744	Open in IMG/M
3300034121\|Ga0335058_0759243	Not Available	531	Open in IMG/M
3300034122\|Ga0335060_0338297	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	812	Open in IMG/M
3300034166\|Ga0335016_0245743	Not Available	1132	Open in IMG/M
3300034166\|Ga0335016_0327458	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	925	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.75%
Terrestrial	Environmental → Terrestrial	2.44%
Biotransformation	Engineered → Biotransformation	0.81%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	94.31%
Marine	Environmental → Aquatic → Marine	2.44%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.44%
Microbial Solubilization Of Coal	Engineered → Biotransformation → Microbial Solubilization Of Coal	0.81%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	64.23%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.70%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	8.94%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.44%
Pond	Environmental → Aquatic → Freshwater → Pond	1.63%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Coastal	Environmental → Aquatic → Marine → Coastal	0.81%
Unclassified	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	64.23%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	11.38%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	8.94%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	4.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.44%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	1.63%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.81%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.81%
Unclassified	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	50.41%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	11.38%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	8.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.69%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.88%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.25%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.44%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	2.44%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.63%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	1.63%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.81%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.81%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.81%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.81%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.81%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.81%
Hydrocarbon Resource Environments	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified → Hydrocarbon Resource Environments	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352005	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300000052	Coal bed methane well microbial communities from Alberta, Canada	Engineered	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002369	Freshwater microbial communities from Lake Mendota, WI - 14NOV2009 deep hole epilimnion	Environmental	Open in IMG/M
3300002370	Freshwater microbial communities from Lake Mendota, WI - 03MAY2011 deep hole epilimnion	Environmental	Open in IMG/M
3300002379	Freshwater microbial communities from Lake Mendota, WI - 19NOV2010 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300007955	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_3.0um	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300010388	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV, may 2015	Environmental	Open in IMG/M
3300010970	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV1, april 2016	Environmental	Open in IMG/M
3300012715	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES122 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012719	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES123 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012725	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES137 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012726	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES115 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012730	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES126 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020493	Freshwater microbial communities from Lake Mendota, WI - 14NOV2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020502	Freshwater microbial communities from Lake Mendota, WI - 29OCT2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020520	Freshwater microbial communities from Lake Mendota, WI - 02JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020528	Freshwater microbial communities from Lake Mendota, WI - 26OCT2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020543	Freshwater microbial communities from Lake Mendota, WI - 29JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020558	Freshwater microbial communities from Lake Mendota, WI - 13OCT2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020565	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021108	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300027254	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3 (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034051	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034166	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2200187169	2199352005	Freshwater	QDLRDFINNNEIKILAGEKVEFPPQPDFIDLNIIY
Draft_0020631	3300000052	Hydrocarbon Resource Environments	DFPIEYEQQLIIKKYRKDLREFINNNEIKILAGETVSWPEQPDFIDLYIVY*
TBL_comb47_HYPODRAFT_100645831	3300000553	Freshwater	QMKIKEYRQALREFINNNKDNYLNGQAKIDFPPQPDFIELNIIY*
B570J29640_1058042	3300002369	Freshwater	KAYRQELRDFINNNEIKILAGEKVEFPQQPDFINLNIIY*
B570J29631_1071792	3300002370	Freshwater	LSDYPISLEHQMIIKTYRQDLREFINNNEVRILAGEKIEFPFQPDFINLNIIY*
B570J29633_1026221	3300002379	Freshwater	IAYDQQLIIKKYRQELRDFINNNEIKILAGEKVEFPPQPDFIDLNIIY*
B570J29032_1090746361	3300002408	Freshwater	MIIKAYRQELRDFINNNEIKILAGEKVEFPQQPDFINLNIIY*
B570J29032_1092315392	3300002408	Freshwater	RQELRDFINNNEIKILAGEIVKFPEPPDFINLNILY*
B570J29032_1097709061	3300002408	Freshwater	EQQMIIKKYRQDLRDFINNNEIKILSGEKVDWPNQPDFIDLNIIY*
Ga0031658_10577901	3300003860	Freshwater Lake Sediment	TDKYILSDYPISLEHQMIIKTYRQDLREFINXNEVRILAGEKIEFPFQPDFINLNIIY*
Ga0102856_10414732	3300007636	Estuarine	DYPITLEQQMQIKLYRQELREFININNELILTGAKVDYPIQPDFIDLNIIY*
Ga0105740_10663362	3300007955	Estuary Water	DKYILSDYPITLEKQMIIKTYRQELRDFINNNEIKILAGEKVAFPQQPDFIDLNIIY*
Ga0114341_102568311	3300008108	Freshwater, Plankton	QDLREFINNNEVRILAGEKIEFIIQPDFINLNIIY*
Ga0114344_10828981	3300008111	Freshwater, Plankton	KYRKDLREFINNNEIKILAGETVSWPEQPDFIDLYIVY*
Ga0114351_14244612	3300008117	Freshwater, Plankton	SDYPISLEHQMIIKTYRQDLREFINNNEVRILAGEKIEFPFQPDFINLNIIY*
Ga0114355_11968302	3300008120	Freshwater, Plankton	YEQQMIIKKYRQDLRDFINKNEIKILAGEKVDFPPVPDFIDLNIIY*
Ga0114973_105206171	3300009068	Freshwater Lake	KSKLIYMNEYITNTDQFLLSDYPISLEQQMIIIAYRQDIRNFINENKIKILAGEKIDFPPQPNFLNLNIIY*
Ga0114963_102852971	3300009154	Freshwater Lake	IIKKYRQDLRNFINENEIKILAGEKVDFPKQPDFIDLNIIY*
Ga0114969_102072742	3300009181	Freshwater Lake	MIIKTYRQDLRNFINDNKEKILNGEKIEFPKQPDFIDLNIIY*
Ga0114969_105397831	3300009181	Freshwater Lake	QQLIIKDYRKNLRNFINENEIKILAGEKIEFPIQPDFIDLNIIY*
Ga0114971_107268621	3300009185	Freshwater Lake	ARNIRSELLNKSDKYFLIDFPIGYEQQVINKKYRQDLRNFINENEIKILAGEKVDFPKQPDFIDLNIIY*
Ga0114972_106408891	3300009187	Freshwater Lake	LIIKKYRQDLRNFINENEIKILAGEKVTWPEQPDFIDLNIIY*
Ga0136551_10607371	3300010388	Pond Fresh Water	SLSQQIEIKTYRQDLRQFIDDNQERILNGEKVEFPPQPTFINLNIIY*
Ga0137575_100327251	3300010970	Pond Fresh Water	FLIDYPIDHEQQNIIKIYRQELRDFININKEKILAGEKVEFPIKPDFIDLNIIY*
Ga0157599_10942532	3300012715	Freshwater	LIDFPIEYEKQLIIKKYRQDLRDFINNNEIKILAGEKVEFPPQPDFIDLNIIY*
Ga0157600_11269742	3300012719	Freshwater	FLIDYPVAYEQQMIIKKYRQDLRDFINNNEIKILAGEKVDFPPVPDFIDLNIIY*
Ga0157610_12724641	3300012725	Freshwater	TDRYFLIDFPIEHEKQMIIKKYRQELRDFINENEIKILAGEKVEFPQQPDFIELNIIY*
Ga0157597_11372442	3300012726	Freshwater	QQMIIKTYRQELREFINNNIELILTGAKLDFPKQPDFINLNIIY*
Ga0157602_10994541	3300012730	Freshwater	KKYRQDLRDFINNNEIKILAGEKVEFPPVPDFIDLNIIY*
Ga0164293_104136602	3300013004	Freshwater	IKAYRQELRDFINNNEIKILAGEKVEFPQQPDFIDLNIIY*
Ga0164293_107255232	3300013004	Freshwater	IEYEKQMIIKKYRQDLREFINNNEIKILAGEKVEFPPQPDFIDLNIIY*
Ga0164293_107398561	3300013004	Freshwater	QQMIVKTYRQELRDFINNYEIKILAGEKVAFPQQPDFIDLNIIY*
Ga0164293_109994691	3300013004	Freshwater	MIIKTYRQDLRDFINNNEIKILAGEKVEFPTVPDFIDLNIIY*
Ga0164292_101239804	3300013005	Freshwater	DYPIAYEQQIIIKTYRQVLRDFINNNEIKILAGEKVDFPEPPDFIDLNIIY*
Ga0164292_103112401	3300013005	Freshwater	KKYRQDLRNFINENEIKILAGEKVELPIQPDFIELNIIY*
Ga0164292_104029201	3300013005	Freshwater	TLEQQMIIKTYRQELREFINNNIELILTGAKIDFPKQPDFINLNIIY*
Ga0164292_109278551	3300013005	Freshwater	AYEQQMIIKAYRQELRDFINNDEIKILAGEKVEFPQQPDFIDLNIVY*
Ga0164294_103497942	3300013006	Freshwater	TLEQQMIIKTYRQELREFINNNEIKILAGEKVDFPPQPDFIDLNIIY*
Ga0170791_124682361	3300013295	Freshwater	ILSDYPISLEQQMKIKEYRQALRKFINNNKDKYLNGQAQIDFPPQPDFIDLNIIY*
Ga0170791_137902991	3300013295	Freshwater	QDLRNFINENEIKILAGEKIEFPIQPDFIDLNIIY*
Ga0170791_154109812	3300013295	Freshwater	YPITLEQQNEIKEYRQKLREFINENEIKILTGEKVEFPKQPDFIDLNIIY*
Ga0211733_109776092	3300020160	Freshwater	YEQQLIIKTYRQNLRDFINDNKERILNGDKIEMPKQPDFIDLNIIY
Ga0211735_100487721	3300020162	Freshwater	QQIIIKSYRQELRDFINNNKEKILNGDKIDFPQQPDFIDLNIIY
Ga0211729_102665351	3300020172	Freshwater	EQQMIIKLYRQDLREFININKEKILNGDKIDFPTQPDFIDLNIIY
Ga0211729_110533181	3300020172	Freshwater	LIDYPIQYEQQNIIKAYRQELRDFINDNKERILNGDKIELPKQPDFIDLNIIY
Ga0208591_10136081	3300020493	Freshwater	PIAYDQQMIIKAYRQELRDFINNNEIKLLAGEKVEFPIKPDFIDLNIIY
Ga0208087_10348351	3300020502	Freshwater	QDLRDFINENEIKILAGEKVEWPKQPDFIDLNIIY
Ga0208481_10098471	3300020520	Freshwater	LLNRTDRYFLIDYPIAYEQQMIIKTYRRELREFINNNKERILNGEKVDFPEQPNFIDLNIIY
Ga0208224_10075003	3300020528	Freshwater	IKTYRQDLRDFINNYEIKLLAGEKVAFPQQPDFIDLNIIY
Ga0208089_10186081	3300020543	Freshwater	IAYEQQMIIKKYRQDLRDFINNNEIKILAGEKVEFPPVPDFIDLNIIY
Ga0208362_10119481	3300020558	Freshwater	DFPIEHEKQMIIKKYRQELRDFINENEIKILAGEKVEWPKQPDFIDLNIIY
Ga0208362_10187753	3300020558	Freshwater	DFPIEHEKQMIIKKYRQELRDFINENEIKILAGEKVEWPKQPDFIELNIIY
Ga0208718_10237072	3300020565	Freshwater	FLIDYPIAHDQQLIIKAYRQELRDFINNNEIKILAGEKVEFPEPPDFIDLNIIY
Ga0214162_10403222	3300021108	Freshwater	LNRTDRYFLIDYPIAYEQQIIIKAYRQELRDFININKEKILNGDKIDFPTQPDFIDLNII
Ga0214162_10450432	3300021108	Freshwater	TVYRQDLREFINNNEIKILSGDKVEFPPQPTFINLNIIY
Ga0208177_10521461	3300027254	Estuarine	KTDKYILSDYPISLEHQMIIKTYRQDLREFINNNEVRILAGEKIEFIIQPDFINLNIIY
Ga0209392_11649251	3300027683	Freshwater Sediment	KTYRQDLRDMINNNHEKFQAREPVLYPPIPDFIREHQV
Ga0209107_100936121	3300027797	Freshwater And Sediment	EQQLIIKKYRQDLRNFINENKDLILAGNNEIKFPIPPDFIDLNIIY
Ga0209358_105044891	3300027804	Freshwater Lake	DFPIEYEQQMIIKQYRQDLRDFINENEIKILAGEKVEWPKQPDFIDLNIIY
Ga0209358_105412492	3300027804	Freshwater Lake	YILSDYPISLEHQMIIKTYRQDLREFINNNEVRILAGEKIEFIIQPDFINLNIIY
Ga0209230_103046532	3300027836	Freshwater And Sediment	QDLREFINNNEVRILAGEKIEFIIQPDFINLNIIY
Ga0247722_100034759	3300028027	Deep Subsurface Sediment	QIIIKSYRQELRDFINNNKEKILNGDKIEFPTPPDFIDLNIIY
Ga0247722_100997561	3300028027	Deep Subsurface Sediment	YRQELREFININNELILTGAKVDYPIQPDFINLNIIY
Ga0247722_101319061	3300028027	Deep Subsurface Sediment	LLNRTDRYILSDYPISLEQQMIIKAYRQDLRNFINDNKEKILNGEKIDFPPHPDFIDLNIIY
Ga0315899_104296671	3300031784	Freshwater	QYEQQIRIKKYRQDLRNFINENEIKILAGEKVNFPTPPDFIDLNIIY
Ga0315899_106545681	3300031784	Freshwater	YEKQMIIKKYRQDLRDFINNNEIKILAGEKVDWPDQPDFIDLNIIY
Ga0315899_107637122	3300031784	Freshwater	MSLEHQMIIKTYRQDLREFINNNEVRILAGEKIEFPFQPDFINLNIIY
Ga0315899_114703781	3300031784	Freshwater	IDYPIEYEKQMIIKKYRQDLRDFININEEKILSGQKIDFPTQPDFININILY
Ga0315908_101840781	3300031786	Freshwater	DFPIGYEQQVIIKKYRKDLRDFINDNEIKILAGEKVDFPKQPDFIDLNIIY
Ga0315908_113678562	3300031786	Freshwater	YILSDYPISLEQQMIIKTYRQELRQFINDNKEKILNGEKIDFPKQPDFLDLNIIY
Ga0315909_104689042	3300031857	Freshwater	PIQYEQQIIIKKYRQDLRNFINNNEIKILAGEKVEFPIQPDFIELNIIY
Ga0315906_107673521	3300032050	Freshwater	NKTDRYFLIDFPIEYEQQLIIKKYRKDLREFINNNEIKILAGETVSWPEQPDFIDLYIVY
Ga0315906_113094141	3300032050	Freshwater	EYRQELREFINDNKEKILAGEKVEFPTQPDFIDLNIIY
Ga0315905_107678381	3300032092	Freshwater	SYRQALRDCINVNKEKILSGQKLDFPTQPDFTNINILY
Ga0315902_109472061	3300032093	Freshwater	DRYFLIDYPIAYEKQMIIKQYRQDLRDFINNNEIKILAGEKVEFPQQPDFIDLNIVY
Ga0334978_0133780_29_157	3300033979	Freshwater	MIIKKYRQELRDFINENEIKILAGEKVEWPKQPDFIDLNIIY
Ga0334982_0237527_700_882	3300033981	Freshwater	NKTDRYFLIDYPIAYEQQMIIKKYRQDLRDFINNNEIKILAGEKVEFPPQPDFIDLNIIY
Ga0334979_0110812_1518_1646	3300033996	Freshwater	MIIKKYRQELRDFINENEIKILAGEKVEWPKQPDFIELNIIY
Ga0334979_0259765_3_125	3300033996	Freshwater	IKKYRQDLRDFINNNEIKILAGEKVDFPPVPDFIDLNIIY
Ga0334998_0150435_1385_1492	3300034019	Freshwater	QELRDFINNNEIKILAGEKVEFPPQPDFIDLNIIY
Ga0335005_0045414_2836_2964	3300034022	Freshwater	MIIKAYRQELRDFINNNEIKILAGEKVEFPEQPNFINLNIIY
Ga0335005_0177065_1_162	3300034022	Freshwater	LIDYPIAHDQQMIIKAYRQELRDFINNNEIKILAGEKVEFPQQPDFINLNIIY
Ga0335021_0367304_587_715	3300034023	Freshwater	MEIKEYRQNLREFINENEIKILAGEKVEFPQQPDFIELNIIY
Ga0335021_0449503_2_169	3300034023	Freshwater	YFLIDFPIEYEKQLIIKKYRQDLRDFINNNEIKILSGEKVEFPPQPDFIDLNIIY
Ga0335023_0170636_1103_1228	3300034050	Freshwater	IIKNYRQELRDFININKEKILNGDKIDFPTQPDFIDLNIIY
Ga0335023_0197761_981_1109	3300034050	Freshwater	LIIKAYRQELRDFINNNEIKILAGEIVKFPEPPDFINLNILY
Ga0335023_0474231_1_144	3300034050	Freshwater	TLEQQMIIKTYRQELREFINNNTELILTGAKLDFPKQPDFINLNIIY
Ga0335024_0120098_32_160	3300034051	Freshwater	MIIKAYRQELRDFINNNEIKILAGEKVEFPKQPDFIDLNIIY
Ga0335024_0141113_1204_1314	3300034051	Freshwater	RQELRNFINNNEIKILAGEKVEFPTQPDFIDLNILY
Ga0335024_0141614_1191_1313	3300034051	Freshwater	IKNYRQELRDFININKEKILNGDKIDFPTQPDFIDLNIIY
Ga0335024_0475256_471_611	3300034051	Freshwater	YEQQVIIKKYRQDLRNFINENEIKILAGEKVDFPKQPDFIDLNIIY
Ga0335024_0484834_453_605	3300034051	Freshwater	YPITLEQQMQIKLYRQELREFININNELILTGAKVDYPIQPDFIDLNIIY
Ga0335024_0610067_3_128	3300034051	Freshwater	IIKAYRQDLRNFINDNKEKILNGEKIDFPPQPDFIDLNIIY
Ga0334983_0228793_2_109	3300034060	Freshwater	QVLRDFINNNEIKILAGEKVDFPEPPDFLDLNIIY
Ga0334983_0314700_790_930	3300034060	Freshwater	LDEQLIIKTYRQELRDFINNNEIKILAGEKVEFPQQPDFIDLNIVY
Ga0334983_0373480_674_802	3300034060	Freshwater	MIIKTYRQDLREFINNNKERILNGEKVDLPEQPNFIDLNIIY
Ga0334983_0457648_613_723	3300034060	Freshwater	RQELRDFINNYEIKILAGEKVAFPQQPDFIDFNIEY
Ga0334983_0781915_317_499	3300034060	Freshwater	NKTDKYFLIDYPIHYEQQVIIKKYRQDLRNFINENEIKILAGEKPEFPKPPDFIDLNIIY
Ga0335001_0443175_2_118	3300034064	Freshwater	KYRQDLRDFINENEIKILAGEKVDFPPQPDFIDLNIIY
Ga0335019_0439140_626_790	3300034066	Freshwater	FLIDYPIAYEQQMIIKKYRQDLRDFINNNEIKILAGEKVEFPPQPDFIDLNIIY
Ga0335030_0369736_3_116	3300034103	Freshwater	YRQDLRDFINNNEIKILAGEKVEFPPQPDFIDLNIIY
Ga0335035_0097188_1678_1824	3300034105	Freshwater	MAYDKQLIIKAYRQELRDFINNNEIKILAGEIVKFPEPPDFINLNILY
Ga0335035_0581416_466_597	3300034105	Freshwater	QIEIKAYRQDLRNFINDNKEKILNGEKIDFPPQPDFIDLNIIY
Ga0335037_0061373_1_138	3300034107	Freshwater	ISLLLIKAYRQELRDFINNNEIKLLAGEKVEFPIKPDFIDLNIIY
Ga0335037_0132913_1_129	3300034107	Freshwater	MIIKTYRQDLREFINNNEVRILAGEKIEFIIQPDFINLNIIY
Ga0335037_0274080_795_920	3300034107	Freshwater	IIKAYRQELRDFINNNKDIILTGQILDFPKPPDFINLNIIY
Ga0335037_0369000_636_776	3300034107	Freshwater	YEQQMIIKLYRQDLREFININKEKILNGDKLDFPVIPDFIDLNIIY
Ga0335037_0429269_548_709	3300034107	Freshwater	LIDYPIAYEQQNTIKAYRQELRDFININKDKILNGDKIDFPTQPDFIDLNIIY
Ga0335037_0506825_495_623	3300034107	Freshwater	MEIKAYRQDLRNFINDNKEKILNGEKIDFPPQPDFIDLNIIY
Ga0335037_0544204_492_617	3300034107	Freshwater	IIKAYRQELRDFINNNEIKILAGEKVEFPQQPDFINLNIIY
Ga0335066_0293829_744_920	3300034112	Freshwater	TDRYFLIDFPIEHEKQMIIKKYRQELRDFINENEIKILAGEKVEFPQQPDFIELNIIY
Ga0335068_0123318_1268_1429	3300034116	Freshwater	LIDYPIAYEQQMIIKKYRQDLRDFINNNEIKILSGEKVDWPNQPDFIDLNIIY
Ga0335068_0151922_1129_1248	3300034116	Freshwater	KTYRQELREFINNNKDIILTGQILDFPKPPDFINLNIIY
Ga0335068_0161153_1031_1204	3300034116	Freshwater	DKYFLIDFPIAYEQQLIIKAYRQELRNFINNNEIKILAGEKVQFPQQPDFIDLNIIY
Ga0335068_0282354_725_832	3300034116	Freshwater	DLRNFINENKDLILAGNNEIKFPQQPDFIDLNIIY
Ga0335068_0452885_490_603	3300034116	Freshwater	YRQDLRNFINNNEIKILAGEKVEFPIQPDFIELNIIY
Ga0335068_0453408_426_602	3300034116	Freshwater	TDKYFLIDFPIGYEQQVIIKKYRQDLRNFINENEIKILAGEKVDFPKQPDFIELNIIY
Ga0335068_0555756_375_521	3300034116	Freshwater	MAYDKQLIIKAYRQELRDFINNNEIKILAGEIVKFPEPPDFIDLNIIY
Ga0335054_0434694_628_744	3300034119	Freshwater	KYRQDLRDFINNNEIKILAGEKVEFPPIPDFIDLNIIY
Ga0335058_0759243_1_138	3300034121	Freshwater	EQQLIIKAYRQELRNFINNNEIKILAGEKVAFPQQPDFIDFNIEY
Ga0335060_0338297_3_146	3300034122	Freshwater	EYEKQLIIKKYRQDLRDFINNNEIKILAGEKVDFPPQPDFIDLNIIY
Ga0335016_0245743_948_1076	3300034166	Freshwater	MIIKTYRQELREFINNNEIKILAGEKVDFPPVPDFIDLNIIY
Ga0335016_0327458_809_925	3300034166	Freshwater	KYRQDLRDFINNNEIKILAGEKVDFPPIPDFIDLNIIY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069699

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences