Metagenome / Metatranscriptome Family F069794

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069794
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	51 residues
Representative Sequence	MRLTALATLVGALAAMTAPATAAWRGYISHPLGFAFAAPGELKVEKGT
Number of Associated Samples	105
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.80 %
% of genes near scaffold ends (potentially truncated)	95.93 %
% of genes from short scaffolds (< 2000 bps)	92.68 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.244 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.138 % of family members)
Environment Ontology (ENVO)	Unclassified (29.268 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.715 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.53% β-sheet: 0.00% Coil/Unstructured: 64.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00890	FAD_binding_2	2.44
PF03401	TctC	1.63
PF11776	RcnB	0.81
PF00873	ACR_tran	0.81
PF01609	DDE_Tnp_1	0.81
PF13442	Cytochrome_CBB3	0.81
PF01436	NHL	0.81
PF10431	ClpB_D2-small	0.81
PF01979	Amidohydro_1	0.81
PF02321	OEP	0.81
PF03466	LysR_substrate	0.81
PF11860	Muramidase	0.81
PF03069	FmdA_AmdA	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.63
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.63
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.81
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.81
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.81
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.81
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.81
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.24 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.24 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.24 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	47.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.95 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	44.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.07 %
Unclassified	root	N/A	9.76 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.72 %
Unclassified	root	N/A	9.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.50 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.63 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.72 %
Unclassified	root	N/A	9.76 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	3.25 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.81 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.81 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.72 %
Unclassified	root	N/A	9.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.25 %
Altererythrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter	0.81 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.81 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.72 %
Unclassified	root	N/A	9.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.25 %
unclassified Altererythrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter → unclassified Altererythrobacter	0.81 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.81 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.72 %
Unclassified	root	N/A	9.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.25 %
Altererythrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter → unclassified Altererythrobacter → Altererythrobacter sp.	0.81 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.81 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100641013	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300002917\|JGI25616J43925_10264873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300003659\|JGI25404J52841_10136132	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005293\|Ga0065715_10386134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	900	Open in IMG/M
3300005332\|Ga0066388_107850819	Not Available	534	Open in IMG/M
3300005533\|Ga0070734_10467376	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005542\|Ga0070732_10990425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300005554\|Ga0066661_10192480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1260	Open in IMG/M
3300005557\|Ga0066704_10347004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	996	Open in IMG/M
3300005576\|Ga0066708_10637428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300005713\|Ga0066905_100176052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1572	Open in IMG/M
3300005713\|Ga0066905_100395815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1119	Open in IMG/M
3300005764\|Ga0066903_104379757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300005937\|Ga0081455_10130956	All Organisms → cellular organisms → Bacteria → Proteobacteria	1961	Open in IMG/M
3300006050\|Ga0075028_100991950	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006057\|Ga0075026_100638488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300006846\|Ga0075430_101297745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300006876\|Ga0079217_11625995	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300007255\|Ga0099791_10153818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300009090\|Ga0099827_11035762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300009098\|Ga0105245_13162932	Not Available	510	Open in IMG/M
3300009156\|Ga0111538_10727667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1257	Open in IMG/M
3300009524\|Ga0116225_1416474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300009610\|Ga0105340_1211775	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300009792\|Ga0126374_10119168	All Organisms → cellular organisms → Bacteria → Proteobacteria	1539	Open in IMG/M
3300009826\|Ga0123355_10695765	All Organisms → cellular organisms → Bacteria → Proteobacteria	1169	Open in IMG/M
3300010047\|Ga0126382_10199932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1421	Open in IMG/M
3300010147\|Ga0126319_1445030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300010358\|Ga0126370_11984400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300010358\|Ga0126370_12463931	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300010359\|Ga0126376_12474683	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300010362\|Ga0126377_11232269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300010362\|Ga0126377_11370059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300010362\|Ga0126377_11559829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300010362\|Ga0126377_12287285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300010362\|Ga0126377_13417834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	513	Open in IMG/M
3300010366\|Ga0126379_11919047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300010366\|Ga0126379_13126288	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300010376\|Ga0126381_100670726	All Organisms → cellular organisms → Bacteria → Proteobacteria	1481	Open in IMG/M
3300010379\|Ga0136449_103358842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300010398\|Ga0126383_11647969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	731	Open in IMG/M
3300011427\|Ga0137448_1196700	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300011429\|Ga0137455_1238635	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300011442\|Ga0137437_1140609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300012203\|Ga0137399_10303166	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300012203\|Ga0137399_10636666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300012208\|Ga0137376_10422837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1157	Open in IMG/M
3300012208\|Ga0137376_11376567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300012209\|Ga0137379_10056037	All Organisms → cellular organisms → Bacteria	3792	Open in IMG/M
3300012210\|Ga0137378_11465114	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012210\|Ga0137378_11697783	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300012350\|Ga0137372_10968887	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012351\|Ga0137386_11001596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300012363\|Ga0137390_11329939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300012683\|Ga0137398_10029401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3094	Open in IMG/M
3300012683\|Ga0137398_10069347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2145	Open in IMG/M
3300012927\|Ga0137416_10658556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300012929\|Ga0137404_10451002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1141	Open in IMG/M
3300012930\|Ga0137407_11026321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300012930\|Ga0137407_11168798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300012930\|Ga0137407_11390514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300012944\|Ga0137410_10518010	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	976	Open in IMG/M
3300012971\|Ga0126369_11708986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300014158\|Ga0181521_10606996	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300014159\|Ga0181530_10583453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300014199\|Ga0181535_10841904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300014863\|Ga0180060_1044308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300015052\|Ga0137411_1005111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300015052\|Ga0137411_1107265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300015245\|Ga0137409_10129893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2316	Open in IMG/M
3300016270\|Ga0182036_11512856	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300016270\|Ga0182036_11553991	Not Available	556	Open in IMG/M
3300016294\|Ga0182041_10613139	Not Available	957	Open in IMG/M
3300016422\|Ga0182039_10246656	All Organisms → cellular organisms → Bacteria → Acidobacteria	1453	Open in IMG/M
3300016422\|Ga0182039_10830301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300017822\|Ga0187802_10321883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300017970\|Ga0187783_11332301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300018084\|Ga0184629_10436242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300018086\|Ga0187769_10286143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300018422\|Ga0190265_10409552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1455	Open in IMG/M
3300021086\|Ga0179596_10406370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300021088\|Ga0210404_10241250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	981	Open in IMG/M
3300021178\|Ga0210408_11151385	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300021374\|Ga0213881_10305261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300021420\|Ga0210394_11492015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300021479\|Ga0210410_11460661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300024288\|Ga0179589_10307423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300025916\|Ga0207663_11723871	Not Available	504	Open in IMG/M
3300025949\|Ga0207667_10969311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300026358\|Ga0257166_1044008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300026496\|Ga0257157_1050876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300026508\|Ga0257161_1004380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2411	Open in IMG/M
3300027512\|Ga0209179_1141573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300027678\|Ga0209011_1136965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300027783\|Ga0209448_10112444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300027889\|Ga0209380_10204992	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300027894\|Ga0209068_10287444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300027907\|Ga0207428_10668704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300028878\|Ga0307278_10458830	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300031768\|Ga0318509_10482953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300031792\|Ga0318529_10415682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300031890\|Ga0306925_11356216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	704	Open in IMG/M
3300031910\|Ga0306923_11449341	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031912\|Ga0306921_10479648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1447	Open in IMG/M
3300031912\|Ga0306921_12012478	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031938\|Ga0308175_102643047	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031941\|Ga0310912_11527242	Not Available	502	Open in IMG/M
3300031942\|Ga0310916_10587177	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300031954\|Ga0306926_12747874	Not Available	533	Open in IMG/M
3300032064\|Ga0318510_10280355	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300032180\|Ga0307471_100223563	All Organisms → cellular organisms → Bacteria → Proteobacteria	1909	Open in IMG/M
3300032180\|Ga0307471_102928323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	606	Open in IMG/M
3300032205\|Ga0307472_100983386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300032892\|Ga0335081_12112685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300033433\|Ga0326726_11281721	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300034090\|Ga0326723_0084434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter → unclassified Altererythrobacter → Altererythrobacter sp.	1364	Open in IMG/M
3300034662\|Ga0314783_095704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	627	Open in IMG/M
3300034817\|Ga0373948_0214425	Not Available	507	Open in IMG/M
3300034820\|Ga0373959_0143217	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.06%
Host-Associated	Host-Associated	8.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.05%
Aquatic	Environmental → Aquatic	13.01%
Plants	Host-Associated → Plants	8.13%
Arthropoda	Host-Associated → Arthropoda	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.61%
Sediment	Environmental → Aquatic → Sediment	8.13%
Freshwater	Environmental → Aquatic → Freshwater	4.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.25%
Peat	Environmental → Terrestrial → Peat	1.63%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.81%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.13%
Loam	Environmental → Terrestrial → Soil → Loam	6.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.81%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.44%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.44%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.63%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.63%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.81%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014863	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT25_16_10D	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1006410132	3300002245	Forest Soil	MRLTALATLVGAALATMIAPAMAAWRGYISHPLGFAFAAPGEVKVEKGTYRGAVA
JGI25616J43925_102648732	3300002917	Grasslands Soil	MRFTVLATLVGALAAMTAPATAAWRGYISHPLGFAFAAPGELKV
JGI25404J52841_101361322	3300003659	Tabebuia Heterophylla Rhizosphere	MRLMALAILVGAALMAMPTPVMAAWRAYISHPLGFSFSAPGELKVEKGAYRGAV
Ga0065715_103861341	3300005293	Miscanthus Rhizosphere	MRLTALAILAGVALAAMTGPAAAQWRGYISHPLGFAFAAPGPMKVEK
Ga0066388_1078508191	3300005332	Tropical Forest Soil	MRLTALATLMGAALATITAPAMAAWHGFISHPLGFAFAAPGMPK
Ga0070734_104673761	3300005533	Surface Soil	MRSRALAMVLGAALAAMSAPAMAAAWHGYISHPLGFAFAAPGELK
Ga0070732_109904252	3300005542	Surface Soil	MRSRALAMVLGAVLAAASAQAKAAAWHGYISHPLGFAFAAPGELKVETGTYRSAVVGDRPTLIYRFMDD
Ga0066661_101924801	3300005554	Soil	MRLTALAILAGAALAATTAPAMADWRAYISHALGFAFAAPGDLKVEKGT
Ga0066704_103470043	3300005557	Soil	MRLTALAILVGAALMATPAMAAWRGYISHPLGFSFSAPGELKVEKGIY
Ga0066708_106374282	3300005576	Soil	MRLTALATLVSAALAALTAPAQAAWKSYISHPLGFAFAAPGDLKVEKGSYRGEVAGP
Ga0066905_1001760521	3300005713	Tropical Forest Soil	MRLTALATLMGTVLIAMTTPATAAWRAYISHPLGFSFS
Ga0066905_1003958151	3300005713	Tropical Forest Soil	MRLTALGILLGVALMATPATAAWRAYISHPLGFSFAAPGELKVDKG
Ga0066903_1043797571	3300005764	Tropical Forest Soil	MRLMTLTTLVISALAAMDAPAGAAWRAYISHSLGFAFAAPGELKIEKETYR
Ga0081455_101309561	3300005937	Tabebuia Heterophylla Rhizosphere	MRLTALAALMGAALMATPATAAWRAYISHPLGFSFSAPGDLKVEKGTYRGT
Ga0075028_1009919502	3300006050	Watersheds	MRLTAVATLVGTALTTMSAPATAAWHGYISHPLGFAFSAPGELAVEKGTYRGAVAGSRDTLVYR
Ga0075026_1006384882	3300006057	Watersheds	MRLTALATLVGAALAAMTAPAMAAWRGYISHPLGFAFAA
Ga0075430_1012977451	3300006846	Populus Rhizosphere	MRFAALATFAGVMLAAMTAPAAAAWNGYISHPLGFAFAG
Ga0079217_116259951	3300006876	Agricultural Soil	MRLTALAISAALALAAMTIPAAAQWRPYISHSLGFAFAAPGQMKVEKG
Ga0099791_101538183	3300007255	Vadose Zone Soil	MRLTALAALVVTFAATTAPATAAWRGYISHPLGFAFAAPGDLKVEK
Ga0099827_110357621	3300009090	Vadose Zone Soil	MRVLTLTALAGAVFLATMAPAAAAWKGYISHPLGFAFAAPGELKVEKGTYQAAVGGKHDTIVFRSV
Ga0105245_131629321	3300009098	Miscanthus Rhizosphere	MRALTVATLAGATLMALAAPASAAWHGYISHPLGFAFAAPGDLKMEKGTYQAAVGGKHDSIVYRFVD
Ga0111538_107276671	3300009156	Populus Rhizosphere	MRLTALAISAALALAAMTVPAAAQWRPYISHSLGFAFAA
Ga0116225_14164741	3300009524	Peatlands Soil	MRSTALAILMGAALAAMTAPAMAAWHAYISHPLGFAFAAPGELKV
Ga0105340_12117751	3300009610	Soil	MRLTVLVALVGVALAAMTAPAAAQWRGYISHPLGFAFAAPGPMKLEKGTYTAPVAGTHDTLVYAF
Ga0126374_101191681	3300009792	Tropical Forest Soil	MRLMALATLMGAGLMAMTTPATAAWRAYISHPLGFSFSAPGDLKVEKGTYRGA
Ga0123355_106957653	3300009826	Termite Gut	MRLRALAIWVGAALAVTSAPATAAWHGYISHPWGFAFAAPGELKVEKGTYRGAVAGARD
Ga0126382_101999323	3300010047	Tropical Forest Soil	MRLTALGILLGVALMATPATAAWRAYISHPLGFSFAAPGELKV
Ga0126319_14450302	3300010147	Soil	MRLAALATLIGAALATMTAPAIAAWRGYISHPLGFAFAAPGE
Ga0126370_119844001	3300010358	Tropical Forest Soil	MRLMALATLLGAALMSTPATAAWRGYISHSLGFSFAAPGEL
Ga0126370_124639312	3300010358	Tropical Forest Soil	MRIMTVLPALVGAALAAMPAPASAAWKGYISHPLGFSFA
Ga0126376_124746831	3300010359	Tropical Forest Soil	MRALTVASLASAALMVMTAPAGAAWHGYISHQLGFAFAAPGELKVEKGTYQ
Ga0126377_112322691	3300010362	Tropical Forest Soil	MRLTALATLVGALAAMTAPAAAAWRGYISHPLGFSFSAPGELKVEKGTYRGAVAG
Ga0126377_113700591	3300010362	Tropical Forest Soil	MRLTILAVLAGFTLTAMVTPAAAQWRGYISHPLGFAFAAPGPMKVEKGTYEGPVAGKHDTLI
Ga0126377_115598291	3300010362	Tropical Forest Soil	MRFTVLATMVGVLAAMTAPATAAWRGYISHPLGFAFAAPGELKVEKGTYRGA
Ga0126377_122872851	3300010362	Tropical Forest Soil	MRLTALATLVSAALAVMTAPATAAWRSYISHPLGFAFAAPGEFKIEKGTYRGEVAGSYDTLV
Ga0126377_134178341	3300010362	Tropical Forest Soil	MALLAGTALAVMTAPAQAAWHGYISHPLGFAFAAPGDLKVEKGTYEGAVAGKH
Ga0126379_119190472	3300010366	Tropical Forest Soil	MRLTALATLVAGLTATTMPATAAWRGYISHPLGFAFAAPGKLEVEKG
Ga0126379_131262882	3300010366	Tropical Forest Soil	MRLTVLTTVMGAALAAMSTPAMAAWHGYISHHLGFAFAAPGELKLEKGTYQAPVAGARETVVYNFMDDNIEYK
Ga0126381_1006707261	3300010376	Tropical Forest Soil	MRVSALATLIGAVLAATAAPAMAAWRSYISHPLGF
Ga0136449_1033588421	3300010379	Peatlands Soil	MRLTALATLAGAALATMTAPAMAAWHGYISHPLGFAFAAPGELK
Ga0126383_116479692	3300010398	Tropical Forest Soil	MALLAGTALAVMTAPAQAAWHGYISHPLGFAFAAPGDLKVEKGTYEGAVAGKHDTLVYHF
Ga0137448_11967002	3300011427	Soil	MRLTVLAILAGFALTALATPAAAQWRPYISHPLGFAFAAPGPMKVEKGTYEAPIAGRRQTTT
Ga0137455_12386351	3300011429	Soil	MRLTALAILTGIVLAAMTGPAAAQWRPYISHPLGFAFAAPGPMKVEKGTYEAPVAGKHDT
Ga0137423_11230982	3300011430	Soil	MRLTVLVALVGVALAAMTAPAAAQWRGYISHPLGFAFAAPGPMKLEKGTYTAPVAGTHDTLVYAFVDDNIEYKA
Ga0137437_11406092	3300011442	Soil	MRSMASALLASAALAVIIAPAEAAPWKGYISHPLGFAFAAPGELKVEKGTYRGAV
Ga0137399_103031663	3300012203	Vadose Zone Soil	MRFKALVFLAGAAFAAMTAPAHAAWHGYISHPLGFAFAAPGELKVEKGTYTGAVAGK
Ga0137399_106366662	3300012203	Vadose Zone Soil	MRLTALATLVGALAAMTAPATAAWRGYISHPLGFAFAAPGELKVEKGTYRGAVAGARDTLVY
Ga0137376_104228373	3300012208	Vadose Zone Soil	MRATQLLISAAMAFSVMTAPAAAAAWKGYISHPLGFAFAAPGELKVEKGTYQAAVAGKHDMIVFRT
Ga0137376_113765671	3300012208	Vadose Zone Soil	MRFTDLVLLAGAALAGMTAPAQAAWHGYISHPLGFAFAAPGELKVEKGTYSGAVAG
Ga0137379_100560374	3300012209	Vadose Zone Soil	MRLTALAILAGATLAAMTAPATAAWRGYISHPLGFAFAAPGELKVEK
Ga0137378_114651141	3300012210	Vadose Zone Soil	MRVLTLTALAGAAFMATMAPAAAAWHGYISHPLGFAFAAPGELKVEKGTYQAA
Ga0137378_116977832	3300012210	Vadose Zone Soil	MRLTALATLVGAALPAMTVPATAAWRGYISHPLGFAFAAPGELKVEKGTYRG
Ga0137372_109688871	3300012350	Vadose Zone Soil	MRLTALAILAGAALTAMTAPAMAAWRGYISHPLGFAFAAPGELK
Ga0137386_110015961	3300012351	Vadose Zone Soil	MRLTALAILAGATLAAMTAPATAAWRGYISHPLGFA
Ga0137390_113299391	3300012363	Vadose Zone Soil	MRLTALATLVSAALAAMTAPAVAAWHGYISHPLGFAFAAPGELKVDKGTY
Ga0137398_100294011	3300012683	Vadose Zone Soil	MRFNALVLLAGAALAGITAPAQAAWQAYISHPLGFAFAAPGELKVEKGTYSAAVAGRHDTLIYRF
Ga0137398_100693471	3300012683	Vadose Zone Soil	MEASMRLTAVAVLAGVALAAMNTPAMAAWHGYISH
Ga0137416_106585562	3300012927	Vadose Zone Soil	MRLTALATLVGAVLAAMTAPAMAAWHGYISHPLGFAFAAPGELKV
Ga0137404_104510023	3300012929	Vadose Zone Soil	MRLTALAILVGAALMATPAMAAWRGYISHPLGFSFSAPGELKVEKGTYRGALA
Ga0137407_110263211	3300012930	Vadose Zone Soil	MRVTAVATLVGAALAAMAVPATAAWRGYISHPLGFAFAAPGELKLEK
Ga0137407_111687981	3300012930	Vadose Zone Soil	MRLTALATLVGALAAMTAPATAAWRGYISHPFGFAFAAPGELKVEKGTYSGAVAGRH
Ga0137407_113905141	3300012930	Vadose Zone Soil	MRLTALAILAGAMLAVTTAPAAAAWRGYISHPLGFAFAAPGELKVTK
Ga0137410_105180103	3300012944	Vadose Zone Soil	MRLTALAILAGAALATMTAPAAAAWRGYISHPLGFAFAAPGD
Ga0126369_117089861	3300012971	Tropical Forest Soil	MRLTALMTLVGTALVAMAAPAAAAWHGYISHPLGFAFAAPGELKVEKGTYRGAVAGAH
Ga0181521_106069961	3300014158	Bog	MRSTALAILMGAALAAMTAPAMAAWRAYISHPLGFAFAAPGELKVEKGTYRGVVAGQRDT
Ga0181530_105834532	3300014159	Bog	MRSTALAILMGAALAAMTAPAMAAWHAYISHPLGFAFAAPGEL
Ga0181535_108419041	3300014199	Bog	MRSMSLATLAGAALAAMTAPAMAAWHGYISHPLGFAFAAPGQLKVEKGTYRGAVAGPR
Ga0180060_10443081	3300014863	Soil	MRLAALATLAGVALTAMTVPASAEWLGYISHPLGFAFAAPGPMKVENGTYTSP
Ga0137411_10051112	3300015052	Vadose Zone Soil	MRLTALATLVGALAAMTAPATAAWRGYISHPLGFAF
Ga0137411_11072652	3300015052	Vadose Zone Soil	MRLTALATLVGALAAMTAPATAAWRGYISHPLGFAFAAPGELKVEKGT
Ga0137409_101298934	3300015245	Vadose Zone Soil	MRLTALAILAGVALGTTTAPAMAAWRGYISHPLGFAFA
Ga0182036_115128561	3300016270	Soil	MRLMTPVTMVIAALAATSAPASAAWRAYISHPLGFAFAAPGELTMEKGTYRGIVAGERDAII
Ga0182036_115539911	3300016270	Soil	MRRALTLLAGAALAATISAPADAAWTGYISHPLGFAFAAPGEM
Ga0182041_106131392	3300016294	Soil	MRLTALATLMGAALATITAPAMAAWHGFISHPLGFAFAAPGMPKVEKGTY
Ga0182039_102466562	3300016422	Soil	MRLTVLATLVGTSLATMIAPATAVWRGYISHPLGFAFAAPGE
Ga0182039_108303011	3300016422	Soil	MRLTALTTLAGVALVAMTAPSRAAWRGYISHPLGFAFAAPGDLKVEKGTYRGA
Ga0187802_103218832	3300017822	Freshwater Sediment	MRLTALATFVGALAVTTAPATAAWRPYISHPLGFAFAAPGEPKVE
Ga0187783_113323012	3300017970	Tropical Peatland	MRLTALATLVGALAATTAPAMAAWRPYISHPLGFAFAA
Ga0184629_104362421	3300018084	Groundwater Sediment	MRLTVLATLAGVALAAMTAPAAAAWNGYISHPLGFAFAAPGEIKVENGTYNS
Ga0187769_102861431	3300018086	Tropical Peatland	MRSTALAILMGVTLATVTAPATAAWHAYISHPLGFAFAAPGELKVEKGTYRGA
Ga0190265_104095521	3300018422	Soil	MRLAVLAALIGVVLSAMATPAAAQWRPYISHPLGFAFAAPGAMKLEK
Ga0193726_11929692	3300020021	Soil	MRWTALATLVGAVLAAMTAPAMTAWRGYISHPLGFAFAAPGELKVEKGTYRGTVAGPRDTVVYRFVD
Ga0179596_104063701	3300021086	Vadose Zone Soil	MRLTALATLVGAVLAAMTAPAMAAWHGYISHPLGFA
Ga0210404_102412501	3300021088	Soil	MRLTALTTLAGVALAAMTAPSMAAWRGYISHPLGFAFAAPGDLKVEKGMYRGAL
Ga0210408_111513852	3300021178	Soil	MRLTAVATLVGTALTTMSAPATAAWHGYISHPLGFAFSAPGELKVEKGTYRGAVAGS
Ga0213881_103052611	3300021374	Exposed Rock	MRRTLRLIMASALAAAMTSPAMAAWHGYISHPMGFAFAAPGALKVEKGIYRSD
Ga0210394_114920151	3300021420	Soil	MRLTALTTLAGVALAAMTAPSMAAWRGYISHPLGFAFAAPGDL
Ga0210402_105724361	3300021478	Soil	MRFMGLAFLAGVALAMAAAPAQAAPWRGYISHPLGFAFAAPGELTVEKGTYRGAVAGPHETTVYKFID
Ga0210410_114606611	3300021479	Soil	MRLTALTTLAGVALAAMTAPSMAAWRGYISHPLGFAFAAPGDLTVEKGMYRGALAGQ
Ga0179589_103074231	3300024288	Vadose Zone Soil	MRLTALATFVGALAAMTAPATAAWRGYISHPLGFAFAAPGELKVEKGT
Ga0207663_117238711	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRLAALATLIGAALATMTAPAMAAWRGYISHPLGFAFAAPG
Ga0207667_109693112	3300025949	Corn Rhizosphere	MRFMALSALVFTALGTISLPAEAATWRGYISHPLGFAFAAPGELKVEKGSYQAAVGGKHDTVVF
Ga0257166_10440081	3300026358	Soil	MRLTALATLVGALAAMTAPATAAWRGYISHPLGFAFAA
Ga0257157_10508762	3300026496	Soil	MRLTALATLAGAALAAMTAPAMAAWHGYISHPLGFAFAAPGELKVEKGTYRGAVAGLHESVVYRFLD
Ga0257161_10043803	3300026508	Soil	MRLTALATLAGAALAAMTAPAMAAWHGYISHPLGFAFAAPGELKVEKGTYH
Ga0209179_11415731	3300027512	Vadose Zone Soil	MRLTALATFVGALAAMTAPATAAWRGYISHPLGFAFAAPGELKV
Ga0209011_11369651	3300027678	Forest Soil	MRLTALVTLAGVALAAMTAPAAAAWRGYISHPLGFAFAAPGEMKVTKGTYRGTVAGG
Ga0209448_101124442	3300027783	Bog Forest Soil	MRLTALATLVGAALATMIAPANAAWRGYISHPLGFAF
Ga0209380_102049921	3300027889	Soil	MRLTALATLVGAVLATIAAPAMAAWHGFISHPLGF
Ga0209068_102874442	3300027894	Watersheds	MRLTALATLVSAALAAMTAPAMAAWHGYISHPLGFAFAAPGHLNMEKGTYRGAVAGPHDTIVY
Ga0207428_106687042	3300027907	Populus Rhizosphere	MRLTVLAILAGFALATFTTPAAAQWRPYISHPLGFAFAAPGPMKVEKGTYE
Ga0307278_104588301	3300028878	Soil	MRLTALATLVSAALATLTAPAQAAWKSYISHPLGFAFAAPGDLKVEKGSYR
Ga0318509_104829532	3300031768	Soil	MRIMTVLPALVAAALAGMPAPASAAWKGYISHPLGFSFAAPGELKVEK
Ga0318529_104156821	3300031792	Soil	MRLAALATLVGAALATMTAPAMAAWRGYISHPLGFAFAAPGELKVEK
Ga0306925_113562161	3300031890	Soil	MRLMAVATLVGAALATMTAPATAVWRGYISHPLGFAFAAPGEIKVEKSTYRGD
Ga0306923_114493411	3300031910	Soil	MRLTVLATLVGTSLAAMIAPATAVWRGYISHPLGFAFAAPGEV
Ga0306921_104796481	3300031912	Soil	MRLAALATLGCAALATMTAPAMAAWRGYISHPLGFAFAAPGELKVEKGTYRG
Ga0306921_120124781	3300031912	Soil	MRLTVLATLVGTSLAAMIAPATAVWRGYISHPLGFAFAAPGEVKVEKGTYRAD
Ga0308175_1026430471	3300031938	Soil	MRFMALAALAFTTLAVTSIPASAAWHGYISHPLGFAFAAPGELKVEKGSYQAAV
Ga0310912_115272421	3300031941	Soil	MRFTGLLVLACAALGAMTAPADAATWKGYISHTLGFAFAAPGDMKIEKGSYQGA
Ga0310916_105871771	3300031942	Soil	MRLTVLATLVGTSLATMIAPATAVWRGYISHPLGFAFAAPG
Ga0306926_127478741	3300031954	Soil	MRLTALATLVGATLAAMTGPVMAAWHGYISHPLGFAFAAPGDLKVEKGTYRGAV
Ga0318510_102803552	3300032064	Soil	MRLTVLATLVGTSLATMIAPATAVWRGYISHPLGFAFAAPGEVKVEKGTY
Ga0307471_1002235633	3300032180	Hardwood Forest Soil	MRLTALATLAGAALAAMTAPAMAAWHGYISHPLGFAFAAPGELKVEKGTYRGAVAGPHDT
Ga0307471_1029283232	3300032180	Hardwood Forest Soil	MRYAAMALLAGAALAVTTAPAEAAWRGYISHPLGFAFAAPGELKVEKGTYQGAVAGKHDT
Ga0307472_1009833862	3300032205	Hardwood Forest Soil	MRFTALAIFAGVAFTSLAAPAEAAAWKGYISHPLGFAFAAPGELKV
Ga0306920_1019984082	3300032261	Soil	MRIMTALPALVAAALAGMPAPASAAWKGYISHPLGFSFAAPGELKVEKGSYRADVAGARDTVVY
Ga0335081_121126851	3300032892	Soil	MRLAALATLVGAALATMAAPATAAWRGYISHPLGFAFAAPGELKVEKGTYRG
Ga0326726_112817212	3300033433	Peat Soil	MRFTALATLMGAALAVMTAPAEAAWRGYISHTYGFAFAAPGDMTIEKGTYR
Ga0326723_0084434_1232_1363	3300034090	Peat Soil	MAALAGAGLMALTAPASAAWKGYISHPLGFAFAMPGEMKVEKGK
Ga0314783_095704_55_225	3300034662	Soil	MRLTALAILAGVALTAMTGPAAAQWRGYISHPLGFAFAAPGPMKVEKGTYEAPVAG
Ga0373948_0214425_3_200	3300034817	Rhizosphere Soil	MRALTVATLAGATLMALAAPASAAWHGYISHPLGFAFAAPGDLKMEKGTYQAAVGGKHDSIVYRFV
Ga0373959_0143217_1_129	3300034820	Rhizosphere Soil	MRALTVATLAGATLMALAAPASAAWHGYISHPLGFAFAAPGDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069794

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences