NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069803

Metagenome / Metatranscriptome Family F069803

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069803
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 87 residues
Representative Sequence MVTMNAIDRHLSSEAAPGNDFIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSPAE
Number of Associated Samples 113
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 79.67 %
% of genes near scaffold ends (potentially truncated) 26.83 %
% of genes from short scaffolds (< 2000 bps) 87.80 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.496 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.382 % of family members)
Environment Ontology (ENVO) Unclassified
(50.407 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(64.228 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.51%    β-sheet: 0.00%    Coil/Unstructured: 79.49%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF13480Acetyltransf_6 9.76
PF13437HlyD_3 6.50
PF13432TPR_16 4.88
PF00614PLDc 4.07
PF13091PLDc_2 2.44
PF13533Biotin_lipoyl_2 2.44
PF00005ABC_tran 1.63
PF13414TPR_11 0.81
PF00701DHDPS 0.81
PF13431TPR_17 0.81
PF03372Exo_endo_phos 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1502Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthaseLipid transport and metabolism [I] 4.07
COG03294-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyaseCell wall/membrane/envelope biogenesis [M] 1.63

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.50 %
UnclassifiedrootN/A6.50 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_104357831All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense776Open in IMG/M
3300004081|Ga0063454_100655038All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales780Open in IMG/M
3300004153|Ga0063455_101169185All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium574Open in IMG/M
3300004479|Ga0062595_102028467All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300005289|Ga0065704_10704702All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005295|Ga0065707_10639942All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300005328|Ga0070676_10703998All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300005328|Ga0070676_11191004All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300005334|Ga0068869_100022523All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia4342Open in IMG/M
3300005334|Ga0068869_100039723All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae3361Open in IMG/M
3300005347|Ga0070668_100196995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1652Open in IMG/M
3300005353|Ga0070669_100081958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia2404Open in IMG/M
3300005356|Ga0070674_101199729All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense674Open in IMG/M
3300005356|Ga0070674_101415511All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium623Open in IMG/M
3300005367|Ga0070667_100169725All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii1925Open in IMG/M
3300005406|Ga0070703_10048003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1355Open in IMG/M
3300005438|Ga0070701_10769899All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense654Open in IMG/M
3300005441|Ga0070700_100232869All Organisms → cellular organisms → Bacteria → Proteobacteria1312Open in IMG/M
3300005444|Ga0070694_100036047All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii3274Open in IMG/M
3300005444|Ga0070694_100805332All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300005457|Ga0070662_100278306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1353Open in IMG/M
3300005471|Ga0070698_100153282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii2251Open in IMG/M
3300005518|Ga0070699_100801574All Organisms → cellular organisms → Bacteria → Proteobacteria862Open in IMG/M
3300005545|Ga0070695_100073611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii2243Open in IMG/M
3300005548|Ga0070665_102113078All Organisms → cellular organisms → Bacteria → Proteobacteria568Open in IMG/M
3300005577|Ga0068857_100474613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1172Open in IMG/M
3300005617|Ga0068859_100318761All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1648Open in IMG/M
3300005617|Ga0068859_101583041All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300005618|Ga0068864_101234116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi747Open in IMG/M
3300005840|Ga0068870_11189475All Organisms → cellular organisms → Bacteria → Proteobacteria551Open in IMG/M
3300005841|Ga0068863_102555003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense520Open in IMG/M
3300005842|Ga0068858_100408128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii1306Open in IMG/M
3300005843|Ga0068860_100211025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii1884Open in IMG/M
3300005844|Ga0068862_101650476All Organisms → cellular organisms → Bacteria → Proteobacteria648Open in IMG/M
3300005844|Ga0068862_101771192All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium627Open in IMG/M
3300005844|Ga0068862_102496868All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300006038|Ga0075365_10041975All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2989Open in IMG/M
3300006048|Ga0075363_100693349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium615Open in IMG/M
3300006844|Ga0075428_100832126All Organisms → cellular organisms → Bacteria980Open in IMG/M
3300006876|Ga0079217_11410127All Organisms → cellular organisms → Bacteria → Proteobacteria545Open in IMG/M
3300006881|Ga0068865_101431143Not Available618Open in IMG/M
3300007788|Ga0099795_10138363All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii988Open in IMG/M
3300009098|Ga0105245_11116428All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300009101|Ga0105247_11033983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium644Open in IMG/M
3300009137|Ga0066709_103123636All Organisms → cellular organisms → Bacteria → Proteobacteria605Open in IMG/M
3300009147|Ga0114129_10262757All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2312Open in IMG/M
3300009148|Ga0105243_10087282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2560Open in IMG/M
3300009176|Ga0105242_12940799All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300009545|Ga0105237_11465301All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium689Open in IMG/M
3300009553|Ga0105249_10947981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium928Open in IMG/M
3300009789|Ga0126307_10374646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1147Open in IMG/M
3300009840|Ga0126313_10777131All Organisms → cellular organisms → Bacteria → Proteobacteria778Open in IMG/M
3300010037|Ga0126304_10859847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium616Open in IMG/M
3300010038|Ga0126315_10124641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1504Open in IMG/M
3300010041|Ga0126312_10642672All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium764Open in IMG/M
3300010042|Ga0126314_10222178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1335Open in IMG/M
3300010044|Ga0126310_11781187All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense513Open in IMG/M
3300010045|Ga0126311_10090899All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2073Open in IMG/M
3300010371|Ga0134125_11280120All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28800Open in IMG/M
3300010375|Ga0105239_11386007All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300010397|Ga0134124_12913904All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.522Open in IMG/M
3300010403|Ga0134123_10510418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii1134Open in IMG/M
3300010999|Ga0138505_100029649All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales740Open in IMG/M
3300011003|Ga0138514_100099410All Organisms → cellular organisms → Bacteria → Proteobacteria630Open in IMG/M
3300011119|Ga0105246_10373120All Organisms → cellular organisms → Bacteria → Proteobacteria1176Open in IMG/M
3300012203|Ga0137399_11762316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium508Open in IMG/M
3300012204|Ga0137374_10180122All Organisms → cellular organisms → Bacteria → Proteobacteria1846Open in IMG/M
3300012212|Ga0150985_117461897All Organisms → cellular organisms → Bacteria → Proteobacteria1725Open in IMG/M
3300012685|Ga0137397_10198670All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1491Open in IMG/M
3300012922|Ga0137394_10077706All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2774Open in IMG/M
3300013308|Ga0157375_12191020All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300014745|Ga0157377_11026935All Organisms → cellular organisms → Bacteria → Proteobacteria626Open in IMG/M
3300014969|Ga0157376_10619844All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1079Open in IMG/M
3300015242|Ga0137412_10092512All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2459Open in IMG/M
3300015371|Ga0132258_13150176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1139Open in IMG/M
3300018028|Ga0184608_10525220Not Available505Open in IMG/M
3300018051|Ga0184620_10046596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1204Open in IMG/M
3300018053|Ga0184626_10225582All Organisms → cellular organisms → Bacteria → Proteobacteria790Open in IMG/M
3300018075|Ga0184632_10475509All Organisms → cellular organisms → Bacteria → Proteobacteria515Open in IMG/M
3300018076|Ga0184609_10509652All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium547Open in IMG/M
3300018078|Ga0184612_10254551All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300018084|Ga0184629_10430918All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense692Open in IMG/M
3300018429|Ga0190272_10133715All Organisms → cellular organisms → Bacteria → Proteobacteria1672Open in IMG/M
3300018429|Ga0190272_11936579All Organisms → cellular organisms → Bacteria → Proteobacteria621Open in IMG/M
3300018476|Ga0190274_10121474All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense2135Open in IMG/M
3300018920|Ga0190273_12281557Not Available511Open in IMG/M
3300019377|Ga0190264_11839834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium547Open in IMG/M
3300019377|Ga0190264_12367214Not Available501Open in IMG/M
3300021078|Ga0210381_10149919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium790Open in IMG/M
3300025711|Ga0207696_1047746All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300025899|Ga0207642_10705335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium636Open in IMG/M
3300025900|Ga0207710_10215026All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium953Open in IMG/M
3300025907|Ga0207645_10248668All Organisms → cellular organisms → Bacteria → Proteobacteria1176Open in IMG/M
3300025908|Ga0207643_10414539All Organisms → cellular organisms → Bacteria → Proteobacteria853Open in IMG/M
3300025933|Ga0207706_10461220All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1099Open in IMG/M
3300025935|Ga0207709_10105903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1870Open in IMG/M
3300025937|Ga0207669_10633214All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense873Open in IMG/M
3300025942|Ga0207689_10004089All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium13268Open in IMG/M
3300026023|Ga0207677_10662842All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense922Open in IMG/M
3300026035|Ga0207703_10357136All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1347Open in IMG/M
3300026075|Ga0207708_10308113All Organisms → cellular organisms → Bacteria → Proteobacteria1289Open in IMG/M
3300027903|Ga0209488_10009674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae7100Open in IMG/M
3300028380|Ga0268265_10900906All Organisms → cellular organisms → Bacteria → Proteobacteria868Open in IMG/M
3300028380|Ga0268265_12409065All Organisms → cellular organisms → Bacteria → Proteobacteria533Open in IMG/M
3300028381|Ga0268264_10266930Not Available1597Open in IMG/M
3300028717|Ga0307298_10211165All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense573Open in IMG/M
3300028719|Ga0307301_10043534All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1372Open in IMG/M
3300028794|Ga0307515_10762487All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium587Open in IMG/M
3300028802|Ga0307503_10226645All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium900Open in IMG/M
3300028803|Ga0307281_10400227All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium525Open in IMG/M
3300028819|Ga0307296_10597154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense604Open in IMG/M
3300031058|Ga0308189_10532384Not Available510Open in IMG/M
3300031093|Ga0308197_10162422Not Available728Open in IMG/M
3300031421|Ga0308194_10179600Not Available672Open in IMG/M
3300031456|Ga0307513_10558293All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium857Open in IMG/M
3300031507|Ga0307509_10337202All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1237Open in IMG/M
3300031730|Ga0307516_10543786All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense815Open in IMG/M
3300031858|Ga0310892_11331350All Organisms → cellular organisms → Bacteria → Proteobacteria515Open in IMG/M
3300031901|Ga0307406_10594463All Organisms → cellular organisms → Bacteria → Proteobacteria912Open in IMG/M
3300031903|Ga0307407_11597592All Organisms → cellular organisms → Bacteria → Proteobacteria517Open in IMG/M
3300031911|Ga0307412_10772097All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense832Open in IMG/M
3300032002|Ga0307416_102166609All Organisms → cellular organisms → Bacteria → Proteobacteria657Open in IMG/M
3300032004|Ga0307414_10194850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1643Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.38%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere10.57%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.32%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil6.50%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere6.50%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.69%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.88%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere4.06%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.06%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza3.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.25%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.44%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.63%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.63%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.81%

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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006048Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300025711Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10435783113300000559SoilMVTMNRNDGYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRSFVNRMVRRWISRQAFGTERFSAPAE*
Ga0063454_10065503813300004081SoilMLQPQVAMNGKDRYPSSGGALSKDTIAGRIPGGLLRVMARDGSQPGSDGRMLLLPPWVTAAMASGPPAFVNRMVRRWISRQAFGTERFS
Ga0063455_10116918513300004153SoilMLQPQVTMNGKDRYPSSGGTLSKDTIAGRIPGGLLRVVARDGSQPGSDGWMLLLPPSMTAAMASGAPAFVNRMVRRWISRQAFGTERFSSPAG*
Ga0062595_10202846723300004479SoilMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPRSDGRTLLLRPWVTVAMASGPRAFVNRMVRRWISRQAFGTVRFSSPAE*
Ga0065704_1070470223300005289Switchgrass RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRAFVNRMVRRWISRQ
Ga0065707_1063994213300005295Switchgrass RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRAFVNRMVRRWISRQAFGTERFSAPAE*
Ga0070676_1070399823300005328Miscanthus RhizosphereMVTMNAIDRHLPSEAAPRNHIIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPAFVNRMVRRGISRQASGAERFLSPAE*
Ga0070676_1119100413300005328Miscanthus RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRSFVNRMVRRWISRQAFGTERFSSAAE*
Ga0068869_10002252313300005334Miscanthus RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEISGGLLHGVARDGSQPGLDGWTLLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE*
Ga0068869_10003972323300005334Miscanthus RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRSFVNRMVRRWISRQAFGTERFSAPAE*
Ga0070668_10019699523300005347Switchgrass RhizosphereMVTMNAIDRHLSSEAAPRDDTIVGEIPGGLLHAVACDGSQPGSDGWAVLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE*
Ga0070669_10008195813300005353Switchgrass RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRSFVNRMVRRWISRQAFGTERFSA
Ga0070674_10119972923300005356Miscanthus RhizosphereAAPGDDTIVGEIPGGLLHAVARDGSQPGADGWAVLLPPWLTAAMASGPPACVNRMVRRWISRQAFGTERFSSAAE*
Ga0070674_10141551113300005356Miscanthus RhizosphereMVTMNAIDRHLPYEAAPRNHIIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPAFVNRMVRRGISRQASGAERFLSPAE*
Ga0070667_10016972513300005367Switchgrass RhizosphereMVTMNRNDRYLCSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRSFVNRMVRRWISRQAFGTERFSAPAE*
Ga0070703_1004800323300005406Corn, Switchgrass And Miscanthus RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRALVNRMVRRWISRQAFGTERFSAPAE*
Ga0070701_1076989913300005438Corn, Switchgrass And Miscanthus RhizosphereRNDRYLCSGGASKDTIAPGVPGGLPHAVARDGPQPRSDGRTLLLRPWVTVAMASGPRAFVNRMVRRRISRQAFGTERFSAPAE*
Ga0070700_10023286913300005441Corn, Switchgrass And Miscanthus RhizosphereMITVNGSDGHLSSGGAPSKDSIAPGVRGGLLHVVARDGSQPGSDGRTLLLAPWPTAAAASGPPAFVNRMVRRWI
Ga0070694_10003604713300005444Corn, Switchgrass And Miscanthus RhizosphereMVTMNRNDRHLSSGGVPGEDTIAGEIPGGLLHVAARDGPQPGSDGRTVLRPPWLTAAMGSGPPAFVNRMVRRWISRQAFGTERFQRRPNR*
Ga0070694_10080533213300005444Corn, Switchgrass And Miscanthus RhizosphereMVTMNRNDRYLCSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRSFV
Ga0070662_10027830623300005457Corn RhizosphereMVTMNRNDRYLCSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRAFVNRMVRRWISRQAFGTERFSAPAE*
Ga0070698_10015328213300005471Corn, Switchgrass And Miscanthus RhizosphereMVTMNRNDRHLSSGGVPGEDTIAGEIPGGLLHVAARDGPQPGSDGRTVLRPPWLTAAMGSGPPAFVNRMVRRWISRQAFGTERFSAPAE*
Ga0070699_10080157413300005518Corn, Switchgrass And Miscanthus RhizosphereMITVNGSDGHLSSGGAPSKDSIAPGVRGGLLHVVARDGSQPGADGRTLLLAPWPTAAVASGPPAFVNRMVRRWI
Ga0070695_10007361113300005545Corn, Switchgrass And Miscanthus RhizosphereLSSGGASKDTIAPGVPGGLPHAVARDGPQPRSDGRTLLLRPWVTVAMASGPRAFVNRMVRRWISRQAFGTERFSAPAE*
Ga0070665_10211307823300005548Switchgrass RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEIPGGLLHAVACDGSQPGSDGWAVLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE*
Ga0068857_10047461333300005577Corn RhizosphereMVTMNAIDRHLPSEAAPRNHIIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE*
Ga0068859_10031876123300005617Switchgrass RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEISGGLLHGVARDGSQPGLDGWTILLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE*
Ga0068859_10158304123300005617Switchgrass RhizosphereMVTMNRNDRYLCSGGASKDTIAPGVPGGLPHAVARDGPQPRSDGRTLLLRPWVTVAMASGPRAFVNRMVRRRI
Ga0068864_10123411613300005618Switchgrass RhizosphereGTMVTMNAIDRHLPSEAAPRNHIIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE*
Ga0068870_1118947523300005840Miscanthus RhizosphereMVTMNAIDRHLSSEGAPGNDPIVGKIPGGLLHAAARDGSQPGSDGRTLLLPPRLIAAMAFGPPVFLNRMVRRWISRQAF
Ga0068863_10255500313300005841Switchgrass RhizosphereAIDRHLSFEAAPGNHTIVDEIPGGLLRAVARDGSQPGPDGRTLLLPPWLTAAMASGPPAFVNRMVRRGISRQASGAERFLSPAE*
Ga0068858_10040812833300005842Switchgrass RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEIPGGLLHAVARDGSQPGADGWAVLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE*
Ga0068860_10021102533300005843Switchgrass RhizosphereEAAPGDDTIVGEIPGGLLHAVARDGSQPGADGWAVLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE*
Ga0068862_10165047613300005844Switchgrass RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEISGGLLHGVARDGSQPGLDGWTLLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERF
Ga0068862_10177119223300005844Switchgrass RhizosphereMVTMNRNDRHLSSGGVPGEDTIAGEIPGGLLHVAARDGPQPGSDGRTVLRPPWLTAAMGSGPPAFVNRMVRRWISRQAFGTERFSALAE*
Ga0068862_10249686823300005844Switchgrass RhizosphereMVTMNAIDRHLSSEGAPGNDPIVGKIPGGLLHAAARDGSQPGSDGRTLLLPPRLIAAMAFGPPVFVNRMVRRWISRQAFGTERFS
Ga0075365_1004197533300006038Populus EndosphereMVTMNGSDGHLSSGGAPSKDSIAPGVRGGLLHVVARDGSQPGADGRTLLLAPWPTAAVASGPPAFVNRMVRRWISRQAFGTERFSSLAE*
Ga0075363_10069334913300006048Populus EndosphereMITVNGSDGHLSSGGAPSKDSIAPGVRGGLLHVVARDGSQPGADGRTLLLAPWPTAAVASGPPAFVNRMVRRWISRQAFGTERFSSLAE*
Ga0075428_10083212613300006844Populus RhizosphereMVTMNAIDRHLPFEAAPRNHIIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPAFVNRMVRRGISRQASGAERFLSPAE*
Ga0079217_1141012723300006876Agricultural SoilMVTMNAIDRHLSSEGAPGNDIIVDEVPGGLLHAVARDGSQPGPDAWTLLLPPWLTVAMASGPPAFVNRMVRRWISRRAFGTERFSSPAE*
Ga0068865_10143114313300006881Miscanthus RhizosphereMVTMNRSDRHLSSGGTPGKGGSAPGLPGGLLYVVTRDGSRPGSDSRMLLLPPWVTATMASGPPAFINRMVRRWISRQAFGTERFSSPAE*
Ga0099795_1013836333300007788Vadose Zone SoilMLQPQVAMNGKDRYPSSGGALSKDTIAGRIPGGLLRVMARDGSQPGSDGRMLLLPPWVTAAMASGPPAFVNRMVRRWISRQAFGTERFSVPAE*
Ga0105245_1111642823300009098Miscanthus RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHVVARDGPQPGSDGRTLLLRPWVTVAMASGPRAFVNRMVRRRISRQAFGTERFQRRPNR*
Ga0105247_1103398323300009101Switchgrass RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEIPGGLLQAVACDGSQPGSDGWTLLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE*
Ga0066709_10312363613300009137Grasslands SoilMVTMNGNDRHLFSEGTPGKHAVAFEIPRAHVMACDRFDGGTLLLSPWLVAAMASGPPAFVNRMVRRWISRQAFGAERFSSRAE*
Ga0114129_1026275723300009147Populus RhizosphereMVTVNGSDGHLSSGGAPSKDSIAPGVRGGLLHVVARDGSQPGADGRTLLLAPWPTAAVASGPPAFVNRMVRRWISRQAFGTERFSSLAE*
Ga0105243_1008728233300009148Miscanthus RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHVVARDGPQPGSDGRTLLLRPWVTVAMASGPRAFVNRMVRRRISRQAFGTERFSAPAE*
Ga0105242_1294079913300009176Miscanthus RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLAHAVARDGPQPGSDGRTVLRPPWLTAAMGSGPPAFVNRMVRRWISRQAFGTERFS
Ga0105237_1146530113300009545Corn RhizosphereGVSTMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRSFVNRMVRRWISRQAFGTERFSAPAE*
Ga0105249_1094798113300009553Switchgrass RhizosphereIDRHLSSEAAPGDDTIVGEIPRGLLHAVACDGSQPGSDGWAVLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE*
Ga0126307_1037464633300009789Serpentine SoilMVAMNAIDRHPSSEGAPGNGAIVGEIPGGLHHAVARDGSRPGFGPPAFVNRMVRRWISRQAFGTERFSSPAE*
Ga0126313_1077713123300009840Serpentine SoilMGTMNAIDRHLSSEGAPSNDTVAGVIPGGLLHAVARDGSQPGFDGRTVLLPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSSAE*
Ga0126304_1085984713300010037Serpentine SoilMVTMNAIDRHLSSEAAPGNDFIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSPAE*
Ga0126315_1012464123300010038Serpentine SoilMGTMNAIDRHLSSEGAPSNDTVAGVIPGGLLHAVARDGSQPGFDGRTVLLPPWLTAAMASGPPACVNRMVRRWISRQAFGTERFSSSAE*
Ga0126312_1064267213300010041Serpentine SoilMVAMNAIDRHPSSEGAPGNGAIVGEIPGGLHHAVARDGSQPGFDGRTVLLPPWLTAAMASGPPACVNRMVRRWISRQAFGTERFSSSAE*
Ga0126314_1022217823300010042Serpentine SoilMGTMNAIDRHLSSEGAPSNDTIAGVIPGGLLHAVARDGSQPGFDGRTVLLSPWLTAAMASGPPACVNRMVRRWISRQAFGTERFSSPAE*
Ga0126310_1178118713300010044Serpentine SoilGRVRSGTMVAMNAIDRHPSSEGAPGNGAIVGEIPGGLHHAVARDGSRPGFGPPAFVNRMVRRWISRQAFGTERFSSPAE*
Ga0126311_1009089933300010045Serpentine SoilMVTMNAIDRHLSSEAATGNDIIVDKISGGLLHAVARDGSQPGPDGRTLPLPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSPAE*
Ga0134125_1128012013300010371Terrestrial SoilMNGKDRHPSSGVALSKDTIAVRIPGGLFRVMARDGSQPGSDGRMLLLPPWMTAAMASGAPAFVNRMVRRWISRQAFGTERFASAAE*
Ga0105239_1138600713300010375Corn RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPRSDGRTLLLRPWVTVAMASGPRAFVNRMVRRWISRQAFGTERF
Ga0134124_1291390423300010397Terrestrial SoilMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPRSDGRTLLLRPWVTVAMASGPRAFVNRMVRRWISRQAFGTERFSAPAE*
Ga0134123_1051041813300010403Terrestrial SoilMNGKDRHPSSGVALSKDTIAVRIPGGLFRVMARDGSQPGSDGRMLLLPPWMTAAMASGAPAFVNRMVRRWISRQAFGTERFSAPAE*
Ga0138505_10002964923300010999SoilMLQPQVTMNGKDRYPSSGGALSEDTNAGRIPGGLLRVMARDGSQPGSDGRILLLPPWVTAAMASRPPEFINRMVRR
Ga0138514_10009941023300011003SoilMVTMNAIDRHLSSEGAPSNDTIAGEIPGGLLQAVARDGSQPGSDGRTLLLPPWLTAAMASDPPACVNRMVRRWISRQAFGTERFSSPAE*
Ga0105246_1037312023300011119Miscanthus RhizosphereMVTMNAIDRHLPSEAAPRNHIIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAARASGPPAFVNRMVRRGISRQASGAERFLSPAE*
Ga0137399_1176231613300012203Vadose Zone SoilMVTMNGNDGHLCSGGAPGKDAIAPEIPGGLPHMVTCDGSQPGLDDRTPLLPAWVAAAMASGPPAFVNRMVRRWISRQAFGTERFSSPGE*
Ga0137374_1018012213300012204Vadose Zone SoilMMGTMNAIDGHLSSEGAPSNDTIAGEIPGGLLHAVARDGSQPGSDGRTLRLPPWLTAAMASDPPACVNRMVRRWISRQAFGTERFSPSAE*
Ga0150985_11746189723300012212Avena Fatua RhizosphereMVTTNGNDRHLSSGGEPVKGTVVPKIPRGLPDVVAWVGSLPGPDGQTILMPPWVTAAMASGPPAFVNRMVRRGISRQAFGTESFSVPAE*
Ga0137397_1019867023300012685Vadose Zone SoilMVTMNGNDRHRSSSGRAPGKDAIAPEISGGLPHMVTCDGSQPGLDDRTPLLAPWVAAAMASGPPAFVNRMVRRWISRQAFGTERFSSPGE*
Ga0137394_1007770633300012922Vadose Zone SoilMVTMNGSDRHRSSSGRAPGKDAIAPEISGGLPHMVTCDGSQPGLDDRTPLLPAWVAAAMASGPPAFVNRMVRRWISRQAFGTERFSSPGE*
Ga0157375_1219102023300013308Miscanthus RhizosphereMVTMNRNDRYLSSRGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRAFVNRMVRRWISRQAFGTERFSAPAE*
Ga0157377_1102693523300014745Miscanthus RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEIPGGLLHAVACDGSQPGSDGWAVLLPPWLTAAMASGPPAYVNRMVRRWISRQAFDTERFSSPAE*
Ga0157376_1061984413300014969Miscanthus RhizosphereAAPRNHIIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPAFVNRMVRRGISRQASGAERFLSPAE*
Ga0137412_1009251233300015242Vadose Zone SoilMLQPQVAMNGKDRYPSSGGALSKDTIAGRIPGGLLRVMARDGSQPGSDGRMLLLPPWVTAAMASGPPAFVNRMVRRWISRQAFGTERFSSPGE*
Ga0132258_1315017623300015371Arabidopsis RhizosphereMLQPQVTMNGKDRYPSSGGALSKAAIAGRSPGGRLRVMARDGSQPGSDGRMLLLPPRVTAAMASGPRALVNRMVRRWISRQAFGTVRFSSPAE*
Ga0184608_1052522013300018028Groundwater SedimentMVTMNAIDRHLSSEAAPGNDTIVDEIPGGLLHAVAHDGSQPGLDGRTLLLPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSLAE
Ga0184620_1004659623300018051Groundwater SedimentMLQPQVTMNGKDRYPSSGGALSKDTNAGRIPGGLLRVMARDGSQPGSDGRMLLMPPWATAAMAAGPPEFINRMVRRWISRQAFGTERFSSLAE
Ga0184626_1022558213300018053Groundwater SedimentMVTMNGSNRHLSSGGAPSKDSIAPGVHGGLLHVVARDGSQPGSDGRTLLLSPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFLSPAE
Ga0184632_1047550913300018075Groundwater SedimentMVTMNGSDRHLSSGGAPSKDSIAGEIPGGLPHVGARDGSQPRSDGRTLLLSPWLTAAMASGPPAFVNRMVRRWISRQAFGTERF
Ga0184609_1050965213300018076Groundwater SedimentMVTMNGNDRYLSSGGAPGKDTIAGEIPGGLLHVAARDGSQPGSDGRTVLRPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSPGE
Ga0184612_1025455113300018078Groundwater SedimentMVTMNGSDRHLSSGGAPSKDSIAPGVHGGLLHVVARDGSQPGSDGRTLLLSPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFLSPAE
Ga0184629_1043091823300018084Groundwater SedimentSGGASKDTIAGEIPGGRLHVVVRDGSQPGFDGRTLLLPPWVAAAMAFGPPTFVNRMVRRWISRQAFGTERFSSPAE
Ga0190272_1013371513300018429SoilMVAMNRNDRHLCSGGAPGKDIIVGEIPGGLLHVVARDGLQPGSDGRTVLRPPWLAAAMASGPPVFVNRMVRRWISRQAFGTERFSSPAE
Ga0190272_1193657923300018429SoilMVTMNRNDRHLSSGGAAGKDTIAGEIPGGLLHVLVLDGSRPGSDGLTVLRPPWLTVAIASGPPAFVNCMVRRWISRQAFGTERFSSPAE
Ga0190274_1012147423300018476SoilMVTMNAIDRHLPSEAAPRNHIIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPAFVNRMVRRGISRQASGAERFLSPAE
Ga0190273_1228155713300018920SoilMVTMNRNDRHLSSGGAAGKDTIAGEIPGGLLRVVVLDGSRPGSAGLTVLRPPWLTVAIASGPPAFVNCMVRRWISRQAFGTERFSSPAE
Ga0190264_1183983413300019377SoilMVAMNRNDRHLSSGGAPGKDIIVGEIPGGLLHVVARDGLQPGSDARTVLRPPWLTVAIASGPSASVNRMVRRWISRQAFGTERFSSPAE
Ga0190264_1236721423300019377SoilMVVMNGIDRLLSSEGAGKDIIAGEIAGGLLLVVARAGSQPGSDGWPALRPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSPAE
Ga0210381_1014991923300021078Groundwater SedimentMVTTNGNDRHLSSGGGPGKDTVVPEIPRGLACDGLQPGSDGQALVMTAAMASDPPAFVNRMVRRWISRQAFGTERFSVPAE
Ga0207696_104774623300025711Switchgrass RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRALVNRMVRRWISRQAFGTERFSAPAE
Ga0207642_1070533523300025899Miscanthus RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRSFVNRMVRRWISRQAFGTERFSAPAE
Ga0207710_1021502623300025900Switchgrass RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEIPGGLLHAVARDGSQPGADGWAVLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE
Ga0207645_1024866823300025907Miscanthus RhizosphereMVTMNAIDRHLPSEAAPRNHIIVDEIPGGLLHAAARDGSQPGSDGRTLLLPPRLIAAMAFGPPGFVNRMVRRWISRQAFGTERFLSAAE
Ga0207643_1041453913300025908Miscanthus RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPAFVNRMVRRGISRQASGAERFLSPAE
Ga0207706_1046122033300025933Corn RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRAFVNRMVRRWISRQAFGTERFSAPAE
Ga0207709_1010590333300025935Miscanthus RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHVVARDGPQPGSDGRTLLLRPWVTVAMASGPRSFVNRMVRRWISRQAFGTERFSAPAE
Ga0207669_1063321423300025937Miscanthus RhizosphereMVTMNAIDRHLPYEAAPRNHIIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPAFVNRMVRRGISRQASGAERFLSPAE
Ga0207689_10004089113300025942Miscanthus RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEIPGGLLQAVARDGSQPGSDGWAVLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE
Ga0207677_1066284223300026023Miscanthus RhizosphereMVTMNAIDRHLPSEAAPRNHIIVDEIPGGLLHAVARDGSQPGPDGRTLLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE
Ga0207703_1035713613300026035Switchgrass RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEIPGGLLHAVACDGSQPGSDGWAVLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERFSSPAE
Ga0207708_1030811323300026075Corn, Switchgrass And Miscanthus RhizosphereMITVNGSDGHLSSGGAPSKDSIAPGVRAGLLHVVARDGSQPGSDGRTLLLAPWPTAAAASGPPAFVNRMVRRWISRQAFGT
Ga0209488_1000967483300027903Vadose Zone SoilMLQPQVAMNGKDRYPSSGGALSKDTIAGRIPGGLLRVMARDGSQPGSDGRMLLLPPWVTAAMASGPPAFVNRMVRRWISRQAFGTERFSVPAE
Ga0268265_1090090623300028380Switchgrass RhizosphereMVTMNAIDRHLSSEAAPGDDTIVGEIPGGLLHAVACDGSQPGSDGWAVLLPPWLTAAMASGPPACVNRMVRRWISRQAFDTERF
Ga0268265_1240906513300028380Switchgrass RhizosphereMVTMKAIDRHLSSEGAPGNDPIVGKIPGGLLHAAARDGSQPGSDGRTLLLPPRLIAAMAFGPPVFVNRMVRRWISRQAFGTERFSSPAE
Ga0268264_1026693013300028381Switchgrass RhizosphereMVTMNRNDRYLSSGGASKDTIAPGVPGGLPHAVARDGPQPGSDGRTLLLRPWVTVAMASGPRSFVNRMVRR
Ga0307298_1021116523300028717SoilMLQPQVTMNGKDRYPSSGGALSKDTIAGRIPGGLLRVMARDGSQPGSDGRMLLLPPWATAAMASRPPAFVNRMVRRWISRQAFGTERFSSPAE
Ga0307301_1004353423300028719SoilMVTMNAIDRHLSSEGAPSNDTIAGEIPGGLLHAVARDGSQPGSDGRPLLLPPWLTAAMASEPPACVNRMVRRWISRQAFGTERFSSSAE
Ga0307515_1076248713300028794EctomycorrhizaMVTMNAIDRHLSSEAATGNDIIVDKISGGLLHAVARDGSQPGPDGRTLPLPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSPAE
Ga0307503_1022664523300028802SoilMLQPQVTMNGKDRYPSSGGALSKDTIAGRIPGGLLRVMARDGSQPGSDGRMLLLPPWATAAMASRPPEFINRMVRRWISRQAFGTERFSSLAE
Ga0307281_1040022713300028803SoilMVTMNRNDRHLSSGGASKDTIAGEIPGGRLHVVVRDGSQPGFDGRTLLLPPWVAAAMAFGPPTFVNRMVRRWISRQAFGTERFSSPAE
Ga0307296_1059715413300028819SoilSGKDRYPSSGGALSKDTIAGRIPGGLLRVMARDGSQPGSDGRMLLMPPWATAAMASGPPEFINRMVRRWISRQAFGTVRFSSPAE
Ga0308189_1053238413300031058SoilMLQPQVTMNGKDRYPSSGGALSKDTIAGRIPGGLLRVMARDGSQPGSDGRILLLPPWVTAAMASRPPEFINRMVRRWISRQAFGTERFSSLAE
Ga0308197_1016242223300031093SoilMDTMNAIDRHLSSEAAPGNHHIIAGENPGGLLHAAARDGSQPGSDGWTLLVPPWLMAAMASGPPACVNRMVRRWISRQAFGTERFSSPAE
Ga0308194_1017960023300031421SoilMDTMNAIDRHLSSEAAPGNHHIIAGENPGGLLHAAARDGSQPGSDGWTLLVPPWLMAAMASGPPACVNRMVRRWISRQ
Ga0307513_1055829313300031456EctomycorrhizaMVMVNRNDRHLSSGGAPGKDTIAGEILGGLLDVVARDGSQPGSDGLTVLRPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSPAE
Ga0307509_1033720233300031507EctomycorrhizaMLQPQVMMNRKDRYPSSGGALSKDTIAGRIPGGLLRVMARDGSQPGSDRRMLLLPPWMTAAMASGPPAFINRMVRRGIFRQAFGTERFSSLAE
Ga0307516_1054378623300031730EctomycorrhizaMVAMNAIDRHLCSEGAPCNDAIVGEIHAGLLHVVARDGSQPRSDGRTLLLPPWLTAAIASGPPAFVNRMVRRWISRQAFGTEHFSPPAE
Ga0310892_1133135023300031858SoilMVTMNAIDRHLSSEGAPGNDPIVGKIPGGLLHVVARDGSQPGSDGRTLLLPPRLIAAMAFGPPVFVNRMVRRWISRQAFGTERFSSAAE
Ga0307406_1059446323300031901RhizosphereMVTMNAIDRHLSSEAAPGNDTIVDEIPGGLLHAVARDGSQPGPGGRTLQSPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSPAE
Ga0307407_1159759223300031903RhizosphereMVTMNAIDRHLPSEAAPGNHIIVGENLGGLLHAAAHDGWQPGPGGRTLLSPPWLTAAMASGPPASVNRMVRRR
Ga0307412_1077209723300031911RhizosphereMVTMNAIDRHLSSEAATGNDIIVDKISGGLLHAVARDGSQPGPGGRTLQSPPWLTAAMASGPPAFVNRMVRRWISRQAFGTERFSSPAE
Ga0307416_10216660923300032002RhizosphereMVTMNAIDRHLSSEGAPCNDTIVGEIPGGLLHAVARDGSQPGSDGRTVLLPPWLTAAMASDPPACVNRMVRRWISRQAFGAERFSSPVE
Ga0307414_1019485033300032004RhizosphereMVTMNAIDRHLPSEAAPGNHIIVGENLGGLLHAAAHDGWQPGPGGRTLLSPPWLTAAMASGPPASVNRMVRRRISRQAFGTERFSSPAE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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