NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069878

Metagenome / Metatranscriptome Family F069878

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069878
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 42 residues
Representative Sequence MADSGLPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGF
Number of Associated Samples 107
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 44.74 %
% of genes near scaffold ends (potentially truncated) 91.87 %
% of genes from short scaffolds (< 2000 bps) 83.74 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (77.236 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(28.455 % of family members)
Environment Ontology (ENVO) Unclassified
(52.033 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.098 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.47%    β-sheet: 0.00%    Coil/Unstructured: 73.53%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF00464SHMT 43.90
PF13620CarboxypepD_reg 5.69
PF06468Spond_N 4.88
PF07087DUF1353 4.07
PF00160Pro_isomerase 3.25
PF02502LacAB_rpiB 2.44
PF09844DUF2071 2.44
PF027373HCDH_N 1.63
PF12833HTH_18 1.63
PF04993TfoX_N 0.81
PF01523PmbA_TldD 0.81
PF02276CytoC_RC 0.81
PF04389Peptidase_M28 0.81
PF10503Esterase_PHB 0.81
PF02190LON_substr_bdg 0.81
PF00082Peptidase_S8 0.81
PF07606DUF1569 0.81
PF09865DUF2092 0.81
PF00083Sugar_tr 0.81
PF04402SIMPL 0.81
PF00723Glyco_hydro_15 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG0112Glycine/serine hydroxymethyltransferaseAmino acid transport and metabolism [E] 43.90
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 43.90
COG0652Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin familyPosttranslational modification, protein turnover, chaperones [O] 3.25
COG0698Ribose 5-phosphate isomerase RpiBCarbohydrate transport and metabolism [G] 2.44
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 1.63
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 1.63
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.63
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.63
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 1.63
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 1.63
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 1.63
COG0312Zn-dependent protease PmbA/TldA or its inactivated homologGeneral function prediction only [R] 0.81
COG2859Outer membrane channel-forming protein BP26/OMP28, SIMPL familyCell wall/membrane/envelope biogenesis [M] 0.81
COG2968Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domainFunction unknown [S] 0.81
COG3070Transcriptional regulator of competence genes, TfoX/Sxy familyTranscription [K] 0.81
COG3387Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 familyCarbohydrate transport and metabolism [G] 0.81
COG3471Predicted secreted (periplasmic) proteinFunction unknown [S] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.24 %
UnclassifiedrootN/A22.76 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002561|JGI25384J37096_10009113All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca3740Open in IMG/M
3300002916|JGI25389J43894_1009185Not Available1635Open in IMG/M
3300002917|JGI25616J43925_10101720Not Available1186Open in IMG/M
3300004058|Ga0055498_10147532All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300005167|Ga0066672_10179768Not Available1340Open in IMG/M
3300005171|Ga0066677_10486654All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300005177|Ga0066690_10621298All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300005181|Ga0066678_10945838All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes561Open in IMG/M
3300005186|Ga0066676_10093812All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1807Open in IMG/M
3300005445|Ga0070708_102205228All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005451|Ga0066681_10381461All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300005540|Ga0066697_10090943All Organisms → cellular organisms → Bacteria1771Open in IMG/M
3300005540|Ga0066697_10187946Not Available1227Open in IMG/M
3300005553|Ga0066695_10042247All Organisms → cellular organisms → Bacteria → Proteobacteria2683Open in IMG/M
3300005554|Ga0066661_10000971All Organisms → cellular organisms → Bacteria10946Open in IMG/M
3300005554|Ga0066661_10447368All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300005557|Ga0066704_10546674All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes755Open in IMG/M
3300005569|Ga0066705_10861131All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium539Open in IMG/M
3300005574|Ga0066694_10264545All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300005576|Ga0066708_10140465Not Available1475Open in IMG/M
3300005586|Ga0066691_10221359Not Available1107Open in IMG/M
3300005598|Ga0066706_10305785Not Available1252Open in IMG/M
3300005719|Ga0068861_101839300All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium601Open in IMG/M
3300005883|Ga0075299_1040418All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300006032|Ga0066696_10169582Not Available1374Open in IMG/M
3300006797|Ga0066659_10372080Not Available1115Open in IMG/M
3300006797|Ga0066659_10774459All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300006806|Ga0079220_10673839All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300006845|Ga0075421_101704288All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300006854|Ga0075425_100597751All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1269Open in IMG/M
3300007076|Ga0075435_101335548All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes628Open in IMG/M
3300009012|Ga0066710_100757769All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300009090|Ga0099827_11907391All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium518Open in IMG/M
3300009137|Ga0066709_100627175All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1535Open in IMG/M
3300009137|Ga0066709_103323739All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes585Open in IMG/M
3300010304|Ga0134088_10206732All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300010320|Ga0134109_10455358All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium521Open in IMG/M
3300010329|Ga0134111_10561116All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes507Open in IMG/M
3300010399|Ga0134127_12429825All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300011269|Ga0137392_10880861All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes738Open in IMG/M
3300011270|Ga0137391_10445596Not Available1102Open in IMG/M
3300011271|Ga0137393_11248891All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes630Open in IMG/M
3300011417|Ga0137326_1000339All Organisms → cellular organisms → Bacteria16785Open in IMG/M
3300012200|Ga0137382_10577593All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes802Open in IMG/M
3300012200|Ga0137382_10826497All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes667Open in IMG/M
3300012203|Ga0137399_11379659All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300012203|Ga0137399_11742755All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium511Open in IMG/M
3300012206|Ga0137380_11462898All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes568Open in IMG/M
3300012207|Ga0137381_11263269All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300012208|Ga0137376_10977491All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium725Open in IMG/M
3300012351|Ga0137386_10286867All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1185Open in IMG/M
3300012356|Ga0137371_11231483All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes557Open in IMG/M
3300012359|Ga0137385_10512303All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300012363|Ga0137390_10491241All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1202Open in IMG/M
3300012396|Ga0134057_1277740All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300012582|Ga0137358_11063271All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300012683|Ga0137398_10584474All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes772Open in IMG/M
3300012917|Ga0137395_10823812All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → unclassified Pelomonas → Pelomonas sp. Root1444672Open in IMG/M
3300012918|Ga0137396_10139998All Organisms → cellular organisms → Bacteria1756Open in IMG/M
3300012918|Ga0137396_10432637All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes976Open in IMG/M
3300012918|Ga0137396_10605146All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium811Open in IMG/M
3300012927|Ga0137416_10702896Not Available888Open in IMG/M
3300014154|Ga0134075_10066468All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1502Open in IMG/M
3300014154|Ga0134075_10199413Not Available861Open in IMG/M
3300014882|Ga0180069_1150429All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes567Open in IMG/M
3300015357|Ga0134072_10081674Not Available961Open in IMG/M
3300017656|Ga0134112_10163558All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes860Open in IMG/M
3300017656|Ga0134112_10273410All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes674Open in IMG/M
3300017657|Ga0134074_1021911All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2111Open in IMG/M
3300017659|Ga0134083_10151576All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300017961|Ga0187778_10729470All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300018084|Ga0184629_10113823Not Available1339Open in IMG/M
3300018431|Ga0066655_10070183All Organisms → cellular organisms → Bacteria1875Open in IMG/M
3300018431|Ga0066655_10214995Not Available1200Open in IMG/M
3300018431|Ga0066655_10661869All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes706Open in IMG/M
3300018433|Ga0066667_10154260All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca1625Open in IMG/M
3300018468|Ga0066662_11147487All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300018482|Ga0066669_10319970All Organisms → cellular organisms → Bacteria → Proteobacteria1271Open in IMG/M
3300020003|Ga0193739_1101480All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium725Open in IMG/M
3300022195|Ga0222625_1223535All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300025905|Ga0207685_10637486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae575Open in IMG/M
3300026301|Ga0209238_1157979All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300026307|Ga0209469_1031327All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1785Open in IMG/M
3300026308|Ga0209265_1084149Not Available895Open in IMG/M
3300026313|Ga0209761_1156359All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300026316|Ga0209155_1160328All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300026327|Ga0209266_1176524All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300026342|Ga0209057_1208215All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium555Open in IMG/M
3300026524|Ga0209690_1034211All Organisms → cellular organisms → Bacteria2408Open in IMG/M
3300026528|Ga0209378_1004852All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis8853Open in IMG/M
3300026529|Ga0209806_1178692All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300026536|Ga0209058_1073825All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1818Open in IMG/M
3300026540|Ga0209376_1350750All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300026542|Ga0209805_1452130All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium501Open in IMG/M
3300026547|Ga0209156_10216860Not Available906Open in IMG/M
3300026548|Ga0209161_10387415All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300026548|Ga0209161_10486678All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300027643|Ga0209076_1146425All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300027846|Ga0209180_10064495All Organisms → cellular organisms → Bacteria2043Open in IMG/M
3300027862|Ga0209701_10032100All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes3407Open in IMG/M
3300027961|Ga0209853_1139449All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium594Open in IMG/M
(restricted) 3300028043|Ga0233417_10623505All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300028536|Ga0137415_10004157All Organisms → cellular organisms → Bacteria14341Open in IMG/M
3300028536|Ga0137415_10183710All Organisms → cellular organisms → Bacteria1915Open in IMG/M
3300031576|Ga0247727_10012823All Organisms → cellular organisms → Bacteria14285Open in IMG/M
3300031576|Ga0247727_10480519All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes972Open in IMG/M
3300031965|Ga0326597_11891345All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300032180|Ga0307471_101112379Not Available956Open in IMG/M
3300032770|Ga0335085_11324768All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300032805|Ga0335078_10389129Not Available1835Open in IMG/M
3300033433|Ga0326726_12202735All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaU1.Bin208536Open in IMG/M
3300033814|Ga0364930_0216340All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium651Open in IMG/M
3300034114|Ga0364938_104059All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300034164|Ga0364940_0242583All Organisms → cellular organisms → Bacteria531Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil28.46%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil12.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil11.38%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.44%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.44%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.63%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.63%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm1.63%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.81%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.81%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.81%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.81%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005883Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011417Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014882Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10DEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031576Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033814Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17EnvironmentalOpen in IMG/M
3300034114Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17EnvironmentalOpen in IMG/M
3300034164Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25384J37096_1000911353300002561Grasslands SoilMRDSGASSGRPGRGSGSFTVHPAEELEVYFNEVAHGRPVG
JGI25389J43894_100918533300002916Grasslands SoilVAERPSRGSGSFTVHIADELEVYFNEVAHGRPVGFVASSKWKPPT
JGI25616J43925_1010172013300002917Grasslands SoilMSDSSSSSGTRSSRGSGGFTVHLADELEVYFSEVKDGRPVGFVASPKWRP
Ga0055498_1014753213300004058Natural And Restored WetlandsMADSGSSGPRRPPRSSGPFTAHSADELEVYFNEASLGRPVGFV
Ga0066672_1017976813300005167SoilVAERPSRGSGSFTVHIADELEVYFNEVAHGRPVGFVASSKWK
Ga0066677_1048665423300005171SoilVAESGQGSSGRSSRASGGFTVHLAEELEVYFNEVAHGRPVGFVSSSKW
Ga0066683_1039433933300005172SoilMADSGSSSTGPGGSGGPNRPSRGSGSFTVHLADELDVYFNEVAHGRPV
Ga0066690_1062129813300005177SoilMPDSSGSSGRPSRGSGSFTVHPAEELEVYFNEVAHGRPVGFVASSKWKPP
Ga0066678_1094583823300005181SoilMPDIGSSAGGNRPSRGSGSFTVHLADELEVYFNEVAHGRPVGFV
Ga0066676_1009381213300005186SoilMGDSGLPPPSSPPNRPSRGSGSLTVHLADELDVYFNEVAHG
Ga0070708_10220522823300005445Corn, Switchgrass And Miscanthus RhizosphereMTDSGSFGGGPNRPSRGSGGFTVHLADELDVYFNEVAHGRPVG
Ga0066681_1038146113300005451SoilMAETGSGGSGFSGRPSRGSGSFTVHLADELEVYFNEVAHGRP
Ga0066697_1009094333300005540SoilMPDSGASSGRPGRGSGSFTVHPAEELEVYFNEVAHGRP
Ga0066697_1018794623300005540SoilMPDSSGSSSRPSRGSGSFTVHPAEELEVYFNEVAHGRPVGFVVSS
Ga0066695_1004224713300005553SoilMADSGSSSTGPGGSGGPNRPSRGSGSCTVHLADELDVYFNEVA
Ga0066661_1000097113300005554SoilMPDSGASSGRPGRGSGSFTVHPAEELEVYFNEVAHGRPVGF
Ga0066661_1044736813300005554SoilVAERPSRGSGSFTVHLADELEVYFNEVAHGRPVGFVASS
Ga0066704_1054667423300005557SoilMADSGSFSGGPGRPSRGSGSLTVHAADELEVYFNEVAHGRPV
Ga0066705_1086113123300005569SoilMRDSGASSGRPSRGSGSFTVHPAEELEVYFNEVAHGRPVGFVASS
Ga0066705_1098341623300005569SoilMADSAGAGSGPGGRPSRGSGSFTVHLAEELEVYFNEVAHGRPVGFVASP
Ga0066694_1026454513300005574SoilMPDSSGSSGRPSRGSGSLTVHPAEELEVYFNEVAHGR
Ga0066708_1014046523300005576SoilMADTGGSSGRPSRGSGSLTVHPAEELEVYFNEVAHGRPVGFVAS
Ga0066691_1022135913300005586SoilMADSGGSSRRPSRGSGSFTVHPAEALEGYFNEVAHGRPV
Ga0066706_1030578523300005598SoilMADSAGAGSGPGGRPSRGSGSFTVHLAEELEVYFNEVAHGR
Ga0068861_10183930023300005719Switchgrass RhizosphereMADSGHPNRPSRGSGSLTVHLADELDVYFNEVAHG
Ga0075299_104041823300005883Rice Paddy SoilMADSGSHRSSRGSGAYLVHMADELEVYFNEVAHGRPVGF
Ga0066696_1016958223300006032SoilVAESGQGSSGRSSRASGGFTVHLAEELEVYFNEVAHGRP
Ga0066652_10026634943300006046SoilMADSGSSSTGPGGSGGPNRPSRGSGSFTVHLADELDVYFNEVAHG
Ga0066659_1037208023300006797SoilMADSAGAGSGPGGRPSRGSGSFTVHLAEELEVYFNEVAHG
Ga0066659_1077445913300006797SoilMPDSSGSSGRPSRGSGSFTVHPAEELEVYFNEVAHGRPVGFVASSKWKP
Ga0079220_1067383933300006806Agricultural SoilMADGSHRSSKGSGAFPVHQADELEVYFNEVAHGRPVGFVGSPKWKP
Ga0075421_10170428813300006845Populus RhizosphereMADSGSFGSGPNRPSRGSGAFTVHLADELDVYFNEVAHGRPVGFVASPKWKPR
Ga0075425_10059775113300006854Populus RhizosphereMADSGSFGSGPNRPSRGSGGFTVHLADELDVYFNE
Ga0075435_10133554813300007076Populus RhizosphereMADSGSFGSGPNRPSRGSGGFTVHLADELDVYFNEVAHGRPV
Ga0066710_10075776933300009012Grasslands SoilMSDASSTGGNRPSRGSGSFTVHLADELEVYFNEVAHGRPVGFVASPKW
Ga0099827_1190739113300009090Vadose Zone SoilMRDSGASSGRPGRGSGSFTVHPAEELEVYFNEVAHGRPVGFV
Ga0066709_10062717513300009137Grasslands SoilMADSGLPNRPSLGSGSLTVHLADELDVYFNGVAHGRPGGVVASP
Ga0066709_10332373913300009137Grasslands SoilMGDSGLPPPSSPPNRPSRGSGSLTVHLADELDVYFNEVAH
Ga0134088_1020673213300010304Grasslands SoilVAESGQGSSGRSSRASGSFTVHLAEELEVYFNEVAH
Ga0134109_1045535823300010320Grasslands SoilMADSDLPPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGFVASPKWKP
Ga0134084_1030836123300010322Grasslands SoilMAETGSGGSGFSGRPSRGSGSFTVHLADELEVYFNEVAHGRPVGFVASSKW
Ga0134064_1018465313300010325Grasslands SoilMADDSLFGSSGGGESPPPGRPSRGSGSLTVHLADELDVYFNEV
Ga0134111_1056111613300010329Grasslands SoilMGDSGLPPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGF
Ga0134127_1242982523300010399Terrestrial SoilMADSGSFGSGPNRPSRGSGAFTVHLADELDVYFNEVAHGRP
Ga0137392_1088086113300011269Vadose Zone SoilMADSGFSPPPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGFVASPKW
Ga0137391_1044559613300011270Vadose Zone SoilMPDSGGSSGRSSRGSGSFTVHPAEELEVYFNEVAHGRPVGF
Ga0137393_1124889123300011271Vadose Zone SoilMADSGSPNRPSRGSGALTVHLADELDVYFNEVAHGRPVGFVASPKW
Ga0137326_100033913300011417SoilMADSGQSNRPPRGSGSLTVHLADELDVYFNEVAHGRPVGFVASPKWK
Ga0137382_1057759323300012200Vadose Zone SoilMSDMTSSGGNRPSRGSGSLTVHLADELEVYFNEVAHGRPVGFVASPKWK
Ga0137382_1082649713300012200Vadose Zone SoilMVDSSWFGSSGTPPGRPGRGSGSLTVHLADELDVYFNE
Ga0137399_1137965923300012203Vadose Zone SoilMPDSGASSGRPGRGSGSFTVHPAEELEVYFNEVAHGRPVGFVASS
Ga0137399_1174275513300012203Vadose Zone SoilMAESGLPNRPSRGSGSLTVHLADELDVYFNEVAHGR
Ga0137380_1146289813300012206Vadose Zone SoilMADSGLPPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGFVASPKW
Ga0137381_1126326913300012207Vadose Zone SoilVAESGQGSSGRSSRASGGFTVHLAEELEVYFNEVAHGRPVGFV
Ga0137376_1097749113300012208Vadose Zone SoilMADSGFTPPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGFVA
Ga0137386_1028686713300012351Vadose Zone SoilMADSGSFGSGPNRPSRGSGGFTVHLADELDVYFNEVAH
Ga0137371_1123148323300012356Vadose Zone SoilMSDMTSSGGNRPSRGSGSLTVHPADELEVYFNEVA
Ga0137385_1051230323300012359Vadose Zone SoilMVERGGGSSSRPSRGSGSFTVHPPEELEVYFNEVAHGRPVGFVA
Ga0137390_1049124113300012363Vadose Zone SoilMADSGSPNRPSRGSGALTVHLADELDVYFNEVAHGRPVGFVASPKWKP
Ga0134057_127774023300012396Grasslands SoilMAETGSGGSGFSGRPSRGSGSFTVHLADELEVYFNEV
Ga0137358_1106327113300012582Vadose Zone SoilMPDSGASSGRPGRGSGSFTVHPAEELEVYFNEVAHG
Ga0137398_1058447423300012683Vadose Zone SoilMADSGLPNRPSRGSGSLTVHLADELDVYFNEVAHGR
Ga0137395_1082381223300012917Vadose Zone SoilMSDSSSSSGARSSRGSGGFTVHLADELEVYFSEVKDGRPVGFVA
Ga0137396_1013999843300012918Vadose Zone SoilMADSGSFGSGPNRPSRGSGGFTVHLADELDVYFNEVAHGRPVGFVASPEW*
Ga0137396_1043263713300012918Vadose Zone SoilMADSGSPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGFVASPKWKP
Ga0137396_1060514613300012918Vadose Zone SoilMADSGLPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGF
Ga0137416_1070289613300012927Vadose Zone SoilMPDSGASSGRPGRGSGSFTVHPAEELEVYFNEVAHGRPVGFVA
Ga0134075_1006646813300014154Grasslands SoilMGDSGLPPSPPPNRPSRGSGSLTVHLADELDVYFNEV
Ga0134075_1019941313300014154Grasslands SoilMPDSGGSSGRSSRGSGSFTVHPAEELEVYFNEVAHG
Ga0180069_115042913300014882SoilMADSGSFGSGPNRPSRGSGGFTVHLADELDVYFNEVAHGRPVGFVASPK
Ga0134072_1008167413300015357Grasslands SoilMAETGSGGSGFSGRPSRGSGSFTVHLADELEVYFNEVAH
Ga0134085_1023179423300015359Grasslands SoilMADSGSSSTGPGGSGGPNRPSRGSGSFTVHLADELDVYFNEVAHGRPVGFVASPKWKPR
Ga0134112_1016355813300017656Grasslands SoilMSDASSTGGNRPSRGSGSFTVHLADELEVYFNEVAH
Ga0134112_1027341033300017656Grasslands SoilMGDSGLPPSPPPNRPSRGSGSLTVHLADELDVYFN
Ga0134074_102191143300017657Grasslands SoilMGDSGLPPPSSPPNRPSRGSGSLTVHLADELDVYF
Ga0134083_1015157613300017659Grasslands SoilMSETGGGFSGRPRGSGPFTVHPADELEVYFNEVAHG
Ga0187778_1072947013300017961Tropical PeatlandGRPPRGSGGFTVYLADELEVYFNEVAHGRPVGFVASTK
Ga0184629_1011382313300018084Groundwater SedimentMADSGSHRSSRSGAYTVHLADELEVYFNEVAHGRPVGFVASPKW
Ga0066655_1007018313300018431Grasslands SoilMADSSGSSSRPSRGSGSFTVHPAEELEVYFNEVAHGRPVGFV
Ga0066655_1021499523300018431Grasslands SoilMPDSSGSSGRPSRGSGSFTVHPAEELEVYFNEVAHGRPVGFVASS
Ga0066655_1066186913300018431Grasslands SoilMADSGLPPPASPPNRPSRGSGSLTVHLADELDVYFNE
Ga0066667_1015426033300018433Grasslands SoilMADTGGSSGRPSRGSGSLTVHPAEELEVYFNEVAHGRPVGFVASAKWKPPT
Ga0066662_1114748713300018468Grasslands SoilVAERPSRGSGSFTVHLADELEVYFNEVAHGRPVGF
Ga0066669_1031997033300018482Grasslands SoilMAEPSSPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGFVA
Ga0193739_110148013300020003SoilMAPGGSDFSSGPSRPPRGSGPFTTHVADELEVYFNEVAGRPV
Ga0210382_1020399123300021080Groundwater SedimentMPDSGSFSTGPGGGAGGPNRPSRGSGAFTVHLADELDVYFNEVAHGRPV
Ga0222625_122353533300022195Groundwater SedimentMTDSGSFGSGPNRPSRGSGGFTVHLADELDVYFNEVAHGRPVGFVAS
Ga0207685_1063748623300025905Corn, Switchgrass And Miscanthus RhizosphereMGDSGFSPPPNRPSRGSGSLTVHLADELDVYFNEVAHG
Ga0209235_127319223300026296Grasslands SoilMTDSSAGSGGGSSGRPSRGSGSFTVHLAEELEVYFNEVAHGRPVGFVASAK
Ga0209238_115797913300026301Grasslands SoilMPDSSGSSGRPSRGSGSLTVHPAEELEVYFNEVAHGRPVGFVAS
Ga0209469_103132713300026307SoilMADSDLPPNRPSRGSGSLTVHLADELDVYFNEVAHGRP
Ga0209265_108414913300026308SoilVAERPSRGSGSFTVHIADELEVYFNEVAHGRPVGFVASS
Ga0209761_115635913300026313Grasslands SoilMSDTGFTGGGNRPSRGSGSFTVHLADELEVYFNEVAH
Ga0209155_116032823300026316SoilMPESGGSSGRPSRGSGSLTVHPAEELEVYFNEVAHGRPVGFVASAK
Ga0209266_117652423300026327SoilMAESGQGSSGRASRASGGFTVHLAEELEVYFNEVAHGRPVGFAA
Ga0209057_120821523300026342SoilMPDSGASSGRPGRGSGSFTVHPAEELEVYFNEVAHGRPVGFVASSKWK
Ga0209690_103421113300026524SoilMADSGGSSRRPSRGSGSFTVHPAEELEVYFNEVAHGRPVGFVASSKWKPP
Ga0209378_100485293300026528SoilVAESGQGSSGRSSRASGGFTVHLAEELEVYFNEVAH
Ga0209806_117869223300026529SoilVAERPSRGSGSFTVHLADELEVYFNEVAHGRPVGFVASSKW
Ga0209058_107382513300026536SoilMADSGLPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGFVASPKWK
Ga0209376_135075013300026540SoilMADTGGSSGRPSRGSGSLTVHPAEELEVYFNEVAHGRPVGFVASAKW
Ga0209805_145213023300026542SoilMADSGSPNRPSRGSGSLTVHLADELDVYFNEVAHGR
Ga0209156_1021686013300026547SoilVADRPSSGSGSFTVHLADELEVYFNEVAHGRPVGFVASSKWKP
Ga0209161_1038741513300026548SoilMPDSGASSGRPGRGSGSFTVHPAEELEVYFNEVAHGRPVGFVASSKWKP
Ga0209161_1048667813300026548SoilMADSAGAGSGPGGRPSRGSGSFTVHLAEELEVYFNEVAHGRPVGFG
Ga0209076_114642523300027643Vadose Zone SoilMPDSGGSSGRSSRGSGSFTVHPAEELEVYFNEVAHGRPVGFVASSKWK
Ga0209180_1006449513300027846Vadose Zone SoilMPDSGGSSGRSSRGSGSFTVHPAEELEVYFNEVAHGRPV
Ga0209701_1003210053300027862Vadose Zone SoilMPDSGASSGRPGRGSGSFTVHPAEELEVYFNEVAHGR
Ga0209283_1030369323300027875Vadose Zone SoilMADSAGAGSGPGGRPSRGSGSFTVHLAEELEVYFNEVAHGRPVGFVASPKWK
Ga0209853_113944923300027961Groundwater SandMADSGSSNRPSRGSSSLTVHLADELDVYFNEVAHGRPVGFV
(restricted) Ga0233417_1062350513300028043SedimentMADSGSSGPRRPPRSSGPFTAHSADELEVYFNEASAGRPVGFVQSAKW
Ga0137415_1000415713300028536Vadose Zone SoilMADSGQPNRPSRGSGSLTVHLADELDVYFNEVAHG
Ga0137415_1018371013300028536Vadose Zone SoilMADSGLPNRPSRGSGSLTVHLADELDVYFNEVAHG
Ga0247727_10012823213300031576BiofilmMADTGSSRRASSGAFFLGSADELEVYFNEVAHGRPVGFV
Ga0247727_1048051923300031576BiofilmMFSPMADTGSSRRPSGGAFFLGSADELEVYFNEVAHGRPVGFVASNKWR
Ga0326597_1189134523300031965SoilMADTGSFGGPNRPSRGSGAFTVHLADELDVYFNEVAHGRPV
Ga0307471_10111237913300032180Hardwood Forest SoilMADSDFSPPPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGFVASPKWK
Ga0335085_1132476823300032770SoilMADSGSHRARGSGAYIMHMADELEVYFNEVGPGRPVGFVASPKWKP
Ga0335078_1038912913300032805SoilMADTGSSGRPPHGPGILAVHAADELEVYFNEMARGRPIG
Ga0326726_1220273513300033433Peat SoilMADSGSHRPPRGSGASTVHLADELEVYFNEVAHGRPVGFV
Ga0364930_0216340_1_1293300033814SedimentMADSGLPNRPSRGSGSLTVHLADELDVYFNEVAHGRPVGFASP
Ga0364938_104059_437_5503300034114SedimentMADSGSFGSGPNRPSRGSGGFTVHLADELDVYFNEVGH
Ga0364940_0242583_411_5303300034164SedimentMADSGSFGSGPNRPSRGSGGFTVHLADELDVYFNEVGHGR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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