Metagenome Family F069974

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069974
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	47 residues
Representative Sequence	GVYYVGLDMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Number of Associated Samples	106
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.65 %
% of genes near scaffold ends (potentially truncated)	83.74 %
% of genes from short scaffolds (< 2000 bps)	86.99 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.358 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.382 % of family members)
Environment Ontology (ENVO)	Unclassified (24.390 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.528 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.16% β-sheet: 23.68% Coil/Unstructured: 63.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01068	DNA_ligase_A_M	4.88
PF01118	Semialdhyde_dh	3.25
PF00486	Trans_reg_C	2.44
PF03625	DUF302	1.63
PF07509	DUF1523	1.63
PF02774	Semialdhyde_dhC	1.63
PF00933	Glyco_hydro_3	0.81
PF00582	Usp	0.81
PF01063	Aminotran_4	0.81
PF07508	Recombinase	0.81
PF01391	Collagen	0.81
PF14518	Haem_oxygenas_2	0.81
PF09278	MerR-DNA-bind	0.81
PF00403	HMA	0.81
PF02798	GST_N	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	4.88
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	4.88
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	1.63
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.63
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	1.63
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	1.63
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.81
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.81
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.81
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.81
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.36 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.36 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.36 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.54 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	69.92 %
Unclassified	root	N/A	27.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	63.41 %
Unclassified	root	N/A	27.64 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	37.40 %
Unclassified	root	N/A	27.64 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	17.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.44 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.81 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	37.40 %
Unclassified	root	N/A	27.64 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	15.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.81 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	37.40 %
Unclassified	root	N/A	27.64 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	15.45 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_10516239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	713	Open in IMG/M
3300001904\|JGI24736J21556_1032181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	810	Open in IMG/M
3300001915\|JGI24741J21665_1059750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	562	Open in IMG/M
3300001977\|JGI24746J21847_1009567	Not Available	1445	Open in IMG/M
3300002070\|JGI24750J21931_1024020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	867	Open in IMG/M
3300004114\|Ga0062593_102106117	Not Available	629	Open in IMG/M
3300004633\|Ga0066395_10277411	Not Available	908	Open in IMG/M
3300005332\|Ga0066388_105657595	Not Available	632	Open in IMG/M
3300005434\|Ga0070709_10182804	Not Available	1473	Open in IMG/M
3300005435\|Ga0070714_100013537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6538	Open in IMG/M
3300005435\|Ga0070714_100077713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2883	Open in IMG/M
3300005436\|Ga0070713_100060943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3155	Open in IMG/M
3300005437\|Ga0070710_10025909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3109	Open in IMG/M
3300005444\|Ga0070694_100030573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3524	Open in IMG/M
3300005457\|Ga0070662_100761673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	821	Open in IMG/M
3300005468\|Ga0070707_100983578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	809	Open in IMG/M
3300005764\|Ga0066903_101428967	Not Available	1301	Open in IMG/M
3300005764\|Ga0066903_102317193	All Organisms → cellular organisms → Bacteria → Proteobacteria	1037	Open in IMG/M
3300005764\|Ga0066903_104006759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	790	Open in IMG/M
3300005764\|Ga0066903_104934610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	708	Open in IMG/M
3300005841\|Ga0068863_100299864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1559	Open in IMG/M
3300006057\|Ga0075026_100792972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	574	Open in IMG/M
3300006755\|Ga0079222_10546334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	865	Open in IMG/M
3300006844\|Ga0075428_101347935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	749	Open in IMG/M
3300006845\|Ga0075421_100156761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2843	Open in IMG/M
3300006845\|Ga0075421_101284074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	811	Open in IMG/M
3300006847\|Ga0075431_100413562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1348	Open in IMG/M
3300006854\|Ga0075425_101157327	Not Available	880	Open in IMG/M
3300006854\|Ga0075425_101799165	Not Available	688	Open in IMG/M
3300006854\|Ga0075425_101944166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	658	Open in IMG/M
3300006880\|Ga0075429_101075821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	703	Open in IMG/M
3300006881\|Ga0068865_101317108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	643	Open in IMG/M
3300006914\|Ga0075436_101361529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	537	Open in IMG/M
3300007076\|Ga0075435_101542760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	583	Open in IMG/M
3300009092\|Ga0105250_10020625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2663	Open in IMG/M
3300009147\|Ga0114129_10187253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2812	Open in IMG/M
3300009156\|Ga0111538_13911021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	515	Open in IMG/M
3300009545\|Ga0105237_10187180	Not Available	2070	Open in IMG/M
3300009839\|Ga0116223_10296227	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300010047\|Ga0126382_10827837	Not Available	792	Open in IMG/M
3300010371\|Ga0134125_10866149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	993	Open in IMG/M
3300010398\|Ga0126383_10049820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3480	Open in IMG/M
3300010403\|Ga0134123_11119072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	812	Open in IMG/M
3300010868\|Ga0124844_1039249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1587	Open in IMG/M
3300010868\|Ga0124844_1267747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	592	Open in IMG/M
3300012019\|Ga0120139_1002452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5040	Open in IMG/M
3300012351\|Ga0137386_11195737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	532	Open in IMG/M
3300012897\|Ga0157285_10007360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2065	Open in IMG/M
3300012898\|Ga0157293_10205401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	596	Open in IMG/M
3300012899\|Ga0157299_10025949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1154	Open in IMG/M
3300012899\|Ga0157299_10093704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	764	Open in IMG/M
3300012909\|Ga0157290_10204358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	673	Open in IMG/M
3300012910\|Ga0157308_10158895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	728	Open in IMG/M
3300012911\|Ga0157301_10333979	Not Available	565	Open in IMG/M
3300012911\|Ga0157301_10425335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	521	Open in IMG/M
3300012955\|Ga0164298_10427837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	864	Open in IMG/M
3300012958\|Ga0164299_10265536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1034	Open in IMG/M
3300012960\|Ga0164301_11311730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	587	Open in IMG/M
3300013766\|Ga0120181_1021722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1627	Open in IMG/M
3300013770\|Ga0120123_1024960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1220	Open in IMG/M
3300014052\|Ga0120109_1044891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	997	Open in IMG/M
3300014052\|Ga0120109_1125146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	599	Open in IMG/M
3300014056\|Ga0120125_1040706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1009	Open in IMG/M
3300014326\|Ga0157380_13007767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	537	Open in IMG/M
3300015371\|Ga0132258_13930104	Not Available	1010	Open in IMG/M
3300015372\|Ga0132256_100162547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2252	Open in IMG/M
3300016294\|Ga0182041_10954335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	773	Open in IMG/M
3300016294\|Ga0182041_11682650	Not Available	587	Open in IMG/M
3300016319\|Ga0182033_12222912	Not Available	500	Open in IMG/M
3300016341\|Ga0182035_11500806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	607	Open in IMG/M
3300016422\|Ga0182039_10916760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300016445\|Ga0182038_10671129	Not Available	900	Open in IMG/M
3300016445\|Ga0182038_11631925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	580	Open in IMG/M
3300017823\|Ga0187818_10410690	Not Available	602	Open in IMG/M
3300017928\|Ga0187806_1254338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	609	Open in IMG/M
3300017937\|Ga0187809_10023784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1954	Open in IMG/M
3300017943\|Ga0187819_10554720	Not Available	653	Open in IMG/M
3300017955\|Ga0187817_10266683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1091	Open in IMG/M
3300018001\|Ga0187815_10308396	Not Available	671	Open in IMG/M
3300019356\|Ga0173481_10229570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	823	Open in IMG/M
3300021560\|Ga0126371_12002206	Not Available	697	Open in IMG/M
3300021560\|Ga0126371_13499048	Not Available	530	Open in IMG/M
3300023064\|Ga0247801_1013057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1056	Open in IMG/M
3300023066\|Ga0247793_1035296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	766	Open in IMG/M
3300023261\|Ga0247796_1016919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1101	Open in IMG/M
3300025893\|Ga0207682_10367954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	678	Open in IMG/M
3300025898\|Ga0207692_10265350	Not Available	1034	Open in IMG/M
3300025916\|Ga0207663_11540570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	535	Open in IMG/M
3300025926\|Ga0207659_10574970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	959	Open in IMG/M
3300025936\|Ga0207670_10667645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	858	Open in IMG/M
3300025940\|Ga0207691_10012760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8042	Open in IMG/M
3300025940\|Ga0207691_10451319	Not Available	1094	Open in IMG/M
3300025941\|Ga0207711_10306965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1464	Open in IMG/M
3300025960\|Ga0207651_10238862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1479	Open in IMG/M
3300025986\|Ga0207658_10234939	Not Available	1549	Open in IMG/M
3300026041\|Ga0207639_10366032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1291	Open in IMG/M
3300026088\|Ga0207641_12607012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	503	Open in IMG/M
3300027462\|Ga0210000_1041040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	734	Open in IMG/M
3300027765\|Ga0209073_10192234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	772	Open in IMG/M
3300027787\|Ga0209074_10294155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	647	Open in IMG/M
3300027874\|Ga0209465_10316847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	781	Open in IMG/M
3300027909\|Ga0209382_10672103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1118	Open in IMG/M
3300031545\|Ga0318541_10837216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	513	Open in IMG/M
3300031573\|Ga0310915_10800906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	663	Open in IMG/M
3300031716\|Ga0310813_11018881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	756	Open in IMG/M
3300031763\|Ga0318537_10197953	Not Available	748	Open in IMG/M
3300031771\|Ga0318546_10986730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	593	Open in IMG/M
3300031879\|Ga0306919_11100821	Not Available	606	Open in IMG/M
3300031910\|Ga0306923_10532894	Not Available	1325	Open in IMG/M
3300031940\|Ga0310901_10387498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	606	Open in IMG/M
3300031941\|Ga0310912_10777533	Not Available	740	Open in IMG/M
3300031942\|Ga0310916_11065336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	673	Open in IMG/M
3300031947\|Ga0310909_11117619	Not Available	640	Open in IMG/M
3300031954\|Ga0306926_10747801	Not Available	1182	Open in IMG/M
3300032001\|Ga0306922_12114764	Not Available	545	Open in IMG/M
3300032013\|Ga0310906_10986692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	605	Open in IMG/M
3300032059\|Ga0318533_11106533	Not Available	580	Open in IMG/M
3300032075\|Ga0310890_10138245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1593	Open in IMG/M
3300032122\|Ga0310895_10118234	Not Available	1105	Open in IMG/M
3300032261\|Ga0306920_101579232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	934	Open in IMG/M
3300032892\|Ga0335081_11120074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	905	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.54%
Host-Associated	Host-Associated	28.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.85%
Plants	Host-Associated → Plants	28.46%
Aquatic	Environmental → Aquatic	5.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.13%
Freshwater	Environmental → Aquatic → Freshwater	4.88%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.59%
Loam	Environmental → Terrestrial → Soil → Loam	15.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2	Host-Associated	Open in IMG/M
3300001915	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7	Host-Associated	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_105162392	3300000890	Soil	TPALALTSGVYYVGLDMTTHTCSVVTHMTHGMKMMGKYKSKEAAEKAMAGMKKCHA*
JGI24736J21556_10321812	3300001904	Corn Rhizosphere	VHYVGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
JGI24741J21665_10597502	3300001915	Corn Rhizosphere	LALTSGVXYVGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
JGI24746J21847_10095673	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	CSVVTHMTHGMKMMGKYKSKEAAEKAMAGMKKCHA*
JGI24750J21931_10240202	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	SGVHYVGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0062593_1021061171	3300004114	Soil	LTEGPYFVGLNTTTHTCSVVTKMEAGMKMMGKYKTKAAAEKAMAGMAECKA*
Ga0066395_102774111	3300004633	Tropical Forest Soil	ESGVYYVGLDKTTHTCSVVTSLAPGMKMMGKFKSQAAAEKAMHGMKSCKA*
Ga0066388_1056575951	3300005332	Tropical Forest Soil	WALEEGMYFVGLDTTTHTCSVMTEMKAGMKMMGKYKSKDEAEKAMASMAECKG*
Ga0070709_101828041	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LALTSGVYYVGLDMTTHTCSVVTHMTHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0070714_1000135371	3300005435	Agricultural Soil	TPALALTSGVYYVGLDMTTHTCSVVTHLTHGMEMMGKYKSKEAAEKAMAGMKKCHA*
Ga0070714_1000777134	3300005435	Agricultural Soil	LALTSGVYYVGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAVAGMKKCHA*
Ga0070713_1000609435	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LALTSGVHYVGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0070710_100259093	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LALTSGVYYVGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0070694_1000305735	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LALTSGVYYVGLDVTTHTCSVVTKMSHGMKMMEKYKSKEAAEKAMAGMKKCHA*
Ga0070662_1007616731	3300005457	Corn Rhizosphere	SGVYYVGLDMTTHTCSVVTKMAPGMKMMGKYKSQKAAEKAMAGMKKCHA*
Ga0070707_1009835781	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YYVGLDMTTHTCSVVTKMAPGMKMMGKYKSQKAAEKAMAGMKKCHA*
Ga0066903_1014289672	3300005764	Tropical Forest Soil	HTCSVVTKMEAGMKMMGKYKTKAAAEKAMHGMAECKA*
Ga0066903_1023171933	3300005764	Tropical Forest Soil	PYFVGLNTTTHTCSVVRHMSAGMKMMGKFKTRAAAEKAMAGMKECKG*
Ga0066903_1040067592	3300005764	Tropical Forest Soil	ALTAGTYFVGLDSTTHTCSVMTEMKAGMKMMGKYDSKEAAEQAMATMKECKGG*
Ga0066903_1049346101	3300005764	Tropical Forest Soil	GVYYVGLDTTTHTCSVMTEMKAGMKMMGKYKSKEEAEKAMASMKECKA*
Ga0068863_1002998645	3300005841	Switchgrass Rhizosphere	TPALALTSGVYYVGLDMTTHTCSVVTKMAPGMKMMGKYKSQKAAEKAMAGMKKCHA*
Ga0075026_1007929721	3300006057	Watersheds	AGPYFVGLDTATKKCSVVTSLPAGMKMMGKYKTKARAEKAMAAMKACKG*
Ga0079222_105463343	3300006755	Agricultural Soil	TPALALTSGVYYVGLDMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0075428_1013479352	3300006844	Populus Rhizosphere	GVYYVGLDMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0075421_1001567611	3300006845	Populus Rhizosphere	TTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0075421_1012840742	3300006845	Populus Rhizosphere	YVGLDMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0075431_1004135621	3300006847	Populus Rhizosphere	LDMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0075425_1011573272	3300006854	Populus Rhizosphere	FALTEGPYFVGLNTTTHTCSVVTKMEAGMKMMGKYKTKAAAEKAMAGMACRM*
Ga0075425_1017991651	3300006854	Populus Rhizosphere	CSVVTKMSPGMKRMGKFKSKEAAEKAMAGMKKCHA*
Ga0075425_1019441661	3300006854	Populus Rhizosphere	PALALTSGVYYVGLDMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0075429_1010758211	3300006880	Populus Rhizosphere	ALALTSGVYYVGLDMTTHTCSVVTHLTHGMEMMGKYKSKEAAEKAMAGMKKCHA*
Ga0068865_1013171081	3300006881	Miscanthus Rhizosphere	HTCSVVTKMAPGMKMMGKYKSQKAAEKAMAGMKKCHA*
Ga0075436_1013615291	3300006914	Populus Rhizosphere	HTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0075435_1015427601	3300007076	Populus Rhizosphere	PALALTSGVYYVGLDMTTHTCSVVTKMAPGMKMMGKYKSQKAAEKAMAGMKKCHA*
Ga0105250_100206255	3300009092	Switchgrass Rhizosphere	TTHTCSVVTHLTHGMEMMGKYKSKEAAEKAMAGMKKCHA*
Ga0114129_101872531	3300009147	Populus Rhizosphere	CSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0111538_139110211	3300009156	Populus Rhizosphere	SGVYYVGLDMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0105237_101871804	3300009545	Corn Rhizosphere	TCSVVTKMAPGMKMMGKYKSQKAAEKAMAGMKKCHA*
Ga0116223_102962272	3300009839	Peatlands Soil	GLDTATHTCSVVTSMSPGMKRMGKYKTQAAAEKAMHGMKKCQG*
Ga0126382_108278371	3300010047	Tropical Forest Soil	EGPYFVGLNTTTHTCSVVTKMEAGMKMMGKYKTKAAAEKAMAGMAECKA*
Ga0134125_108661492	3300010371	Terrestrial Soil	MTTHTCSVVTKMAPGMKMMGKYKSQKAAEKAMAGMKKCHA*
Ga0126383_100498204	3300010398	Tropical Forest Soil	VGLDTTTHTCSVMTEMKAGMKMMGKYKSKEEAEKAMASMAECKG*
Ga0134123_111190721	3300010403	Terrestrial Soil	YVGLDMTTHTCSVVTKLAPGMKMMGKYKSQKAAEKAMAGMKKCHA*
Ga0124844_10392491	3300010868	Tropical Forest Soil	MYFVGLDTTTHTCSVMTEMKAGMKMMGKYKSKEEAEKAMASMAECKG*
Ga0124844_12677472	3300010868	Tropical Forest Soil	YFVGLDTTTHTCSVMTEMKAGMKMMGKYKSKEEAEKAMASMAECKG*
Ga0120139_10024521	3300012019	Permafrost	TYYVGLDPTTHTCSVVTKMTTGMKMMGKYKSKEAAETAMAGMKKCHA*
Ga0137386_111957372	3300012351	Vadose Zone Soil	DTTTHTCSVVTKMTTGMKKMGKYKSKEAAETAMAGMKKCHA*
Ga0157285_100073603	3300012897	Soil	LALTSGVYYVGLDVTTHTCSVVTKMSHGIKMMGKYKFKEAAEKAMAGMKKCHA*
Ga0157293_102054011	3300012898	Soil	LALTTGTYYVGLDTSSHTCSVVTKMAPGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0157299_100259492	3300012899	Soil	TCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0157299_100937041	3300012899	Soil	DMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0157290_102043581	3300012909	Soil	LALTSGVYYVGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMNGMKKCHA*
Ga0157308_101588952	3300012910	Soil	LALTSGVYYVGLDMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0157301_103339792	3300012911	Soil	ALTSGVYYVGLDMTTHTSSVVTEMKPGMKMMGKYKSQKAAEKAMAGMKKCHA*
Ga0157301_104253351	3300012911	Soil	TAGTYYVGLDMTTHTCSVVTHMAHGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0164298_104278371	3300012955	Soil	MTTHTCSVVTHLTHGMEMMGKYKSKEAAEKAMAGMKKCHA*
Ga0164299_102655361	3300012958	Soil	LTVGTYYVGLDTSSHTCSVVTKMTPGMKMMGKYKSKEAAEKAMAGMKKCHA*
Ga0164301_113117302	3300012960	Soil	LDVTTHTCSVVTKMSHGMKMRGKYKSKEAAEKAMAGMKKCHAYTFRVYEFS*
Ga0120181_10217221	3300013766	Permafrost	GTYYVGLDNTTHTCSVVTKMTTGMKMMGKYKSKEAAETAMAGMKKCHA*
Ga0120123_10249604	3300013770	Permafrost	GTYYVGLDTTTHTCSVVTTMTTGMKMMGKYKSKEAAEKAMAGMKKCKA*
Ga0120109_10448911	3300014052	Permafrost	GTYYVGLDTTTHTCSVVTTMTTGMKMMGKYKSKEAAKKAMAGMKKCKA*
Ga0120109_11251461	3300014052	Permafrost	TGTYYVGLDTTTHTCSVVTKMTTGMKMMGKYKSKEAADTAMASMKKCHA*
Ga0120125_10407064	3300014056	Permafrost	TGTYYVGLDTTTHTCSVVTTMTTGMKMMGKYKSKEAAEKAMAGMKKCKA*
Ga0157380_130077671	3300014326	Switchgrass Rhizosphere	VGLDMTTHTCSVVTKMGPGMKMMGKYKSQKAAEKAMAGMKKCHA*
Ga0132258_139301043	3300015371	Arabidopsis Rhizosphere	SQGVGGEWYVGLDTATNKCSVVSSMPSGMKMMGKYKSKEEAETAMHGMKECKV*
Ga0132256_1001625474	3300015372	Arabidopsis Rhizosphere	GLDMTTHTCSVVTKMSHGMKMMGKYKSREAAEKAMAGMKKCHA*
Ga0182041_109543352	3300016294	Soil	PYFVGLNTTTHTCSVVTKMESGMKMMGKYKTHSAAERAMARMKECKG
Ga0182041_116826501	3300016294	Soil	ALVSGPYFVGLNTTTHTCSVVTKMEPGMKMMGTYKSHSAAERAMARMKECKG
Ga0182033_122229122	3300016319	Soil	SGVYYVGLDKTTHTCSVVTSLAPGMKMMGKFKSQAAAEKAMHGMKACKA
Ga0182035_115008061	3300016341	Soil	HTCSVVTKMEPGMKMMGKYKSQAAAEKAMARMKECKG
Ga0182039_109167601	3300016422	Soil	LTSGTYYVGLDTTTHKCSVVTEMKSGMKIMGKYDSKEAAEKAMSSMKECKA
Ga0182038_106711291	3300016445	Soil	ALVSGPYVVGLNTTTHTCSVVTKMEPGMKMMGKYKSHSAAERAMARMKECKG
Ga0182038_116319251	3300016445	Soil	MPGAGPYFVGLDTATHKCSVVTSMTAGMKMMGKYSSKARAERAMHRMKECKG
Ga0187818_104106901	3300017823	Freshwater Sediment	TCSVVTKMTAGMKMMGKYKSKEAAEKAMAGMKECKGG
Ga0187806_12543381	3300017928	Freshwater Sediment	ALALTAGKYYVGLDTTTHTCSVVTHMSAGMKMMGRYRSKAAAEKAMAGMKECQG
Ga0187809_100237845	3300017937	Freshwater Sediment	GEYYVGLDTATHTCSVVTKMTAGMKMMGKYKSKEAAEKAMASMKECKA
Ga0187819_105547202	3300017943	Freshwater Sediment	GAYYVGFDTATKKCSVVNKMAAGMKMMGKYKTQEAAEKAMAGMKECKA
Ga0187817_102666833	3300017955	Freshwater Sediment	ALALTSSRYYVGLDTTTHTCSVVTHMSAGMKMMGRYHSKAAAEKAMAGMKECKG
Ga0187815_103083961	3300018001	Freshwater Sediment	YYVGFDTATKKCSVVNKMAAGMKMMGKYKTREAAEKAMAGMKECKA
Ga0173481_102295702	3300019356	Soil	TTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0126371_120022062	3300021560	Tropical Forest Soil	CSVMTEMKAGMKMMGKYKSKEEAEKAMASMKECKA
Ga0126371_134990482	3300021560	Tropical Forest Soil	GPYFVGLNTTTHTCSVVRHMSAGMKMMGTFKTRAAAEKAMAGMKECKG
Ga0247801_10130571	3300023064	Soil	ATPALALTSGVYYVGLDMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0247793_10352962	3300023066	Soil	YVGLDMTTHTCSVVTEMKPGMKMMGKYKSQKAAEKAMAGMKKCHA
Ga0247796_10169191	3300023261	Soil	YYVGLDMTTHTCSVVTEMKPGMKMMGKYKSQKAAEKAMAGMKKCHA
Ga0207682_103679542	3300025893	Miscanthus Rhizosphere	LALTSGVYYVGLDMTTHTCSVVTHLTHGMEMMGKYKSKEAAEKAMAGMKKCHA
Ga0207692_102653501	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTTHTCSVVTHLTHGMEMMGKYKSKEAAEKAMAGMKKCHA
Ga0207663_115405702	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTTHTCSVVTKMAPGMKMMGKYKSQKAAEKAMAGMKKCHA
Ga0207659_105749701	3300025926	Miscanthus Rhizosphere	TPAFALTAGTYYVGLDMTTHRCSVVTHMAHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0207670_106676451	3300025936	Switchgrass Rhizosphere	SIMWGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0207691_1001276017	3300025940	Miscanthus Rhizosphere	YVGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0207691_104513191	3300025940	Miscanthus Rhizosphere	TCSVVTHLTHGMEMMGKYKSKEAAEKAMAGMKKCHA
Ga0207711_103069651	3300025941	Switchgrass Rhizosphere	LDMTTHTCAVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0207651_102388621	3300025960	Switchgrass Rhizosphere	VHYVGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0207658_102349396	3300025986	Switchgrass Rhizosphere	LALTSGVYYVGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKFHA
Ga0207639_103660323	3300026041	Corn Rhizosphere	CGLDVTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0207641_126070121	3300026088	Switchgrass Rhizosphere	TPALALTSGVYYVGLDMTTHTCSVVTKMAPGMKMMGKYKSQKAAEKAMAGMKKCHA
Ga0210000_10410402	3300027462	Arabidopsis Thaliana Rhizosphere	GLDTSSHTCSVVTKMAPGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0209073_101922341	3300027765	Agricultural Soil	SGVYYVGLDMTTHTCSVVTHLTHGMEMMGKYKSKEAAEKAMAGMKKCHA
Ga0209074_102941552	3300027787	Agricultural Soil	DMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0209465_103168471	3300027874	Tropical Forest Soil	LALTSGTYYVGLDTTTHKCSVVTEMKAGMKMMGKYDSKEAAEKAMSSMKECKA
Ga0209382_106721032	3300027909	Populus Rhizosphere	GLDMTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0318541_108372161	3300031545	Soil	LALTSGTYYVGLDTTTHKCSLVTEMKSGMKMMGKYDSKEAAEKAMSIMKECKA
Ga0310915_108009061	3300031573	Soil	EAEQYYVGLDTTTHTCSVVTKMTPGMKMMGKYKSKEAAEKAMAGMKECKG
Ga0310813_110188811	3300031716	Soil	VGLDMTTHTCSVVTHMTHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0318537_101979531	3300031763	Soil	FVGLNTTTHTCSVVTKMEAGMKMMGKYKTKAAAEKAMAGMAECKA
Ga0318546_109867301	3300031771	Soil	TTTHTCSVVTKMTPGMKMMGKYKSKEAAEKAMAGMKECKG
Ga0306919_101747301	3300031879	Soil	EQIPSSYKMDTTTHTCSVMTEMKAGMKMMGKYKSKEEAEKAMAGMKECKVLT
Ga0306919_111008211	3300031879	Soil	VGLDTTTHTCSVMTEMKAGMKMMGKYKSQEEAEKAMAGMKECHA
Ga0306923_105328943	3300031910	Soil	VYYVGLDKTTHSCSVVTSLAPGMKMMGKFKSQAAAEKAMHGMKACKA
Ga0306923_111958302	3300031910	Soil	MDTTTHTCSVMTEMKAGMKMMGKYKSKEEAEKAMAGMKECKV
Ga0310901_103874981	3300031940	Soil	MTTHTCSVVTKMSHGMKMMGKYKSKEAAEKAMAGMKKCHA
Ga0310912_107775331	3300031941	Soil	LNTTTHTCSVVTKMEAGMKMMGKYKTKAAAEKAMAGMAECKA
Ga0310916_110653362	3300031942	Soil	AMPGAAPYFVGLDPTTHKCSVVTSMAPGMKNMGKFRTQARAERAMARMKKCKG
Ga0310909_111176191	3300031947	Soil	YVGLDMTTHTCSVKTEMKSGMKNMGKFNSKEAAEKAMAGMKECKA
Ga0306926_107478011	3300031954	Soil	MDTTTHTCSVMTEMKAGMKMMGKYKSKEEAEKAMAGMKECKVLT
Ga0306922_121147642	3300032001	Soil	ALVAGPYFVGLNTTTHTCSVVTKMEAGMKMMGKYKTKAAAEKAMAGMKECKG
Ga0310906_109866921	3300032013	Soil	SSHTCSVVTKMAPGMKMMGKYKSKEAAEKAMAGMQKCHA
Ga0318533_111065332	3300032059	Soil	VTPALALVAGPYFVGLNTTTHTCSVVTKMEAGMKMMGKYKTKAAAEKAMAGMKECKG
Ga0310890_101382454	3300032075	Soil	YYVGLDMTTHTCSVVTKMAPGMKMMGKYKSQKAAEKAMAGMKKCHA
Ga0310895_101182342	3300032122	Soil	VGLDTATNKCSVVSSMPSGMKMMGKYKSKEEAETAMHGMKEC
Ga0306920_1015792323	3300032261	Soil	YALESGVYYVGLDTTTHTCSVMTEMKAGMKMMGKYKSKEEAEKAMAGMKECKV
Ga0335081_111200741	3300032892	Soil	ALEASEYYVGLDTTTHTCSVVTKMTAGMKMMGKYKSKEAAEKAMAGMKECKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069974

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences