Metagenome Family F070089

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070089
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	65 residues
Representative Sequence	MKVGDLVKFESALNDDMDHHSVEHGLVVQLSKTGHDTTSAQVLFNDGELWWVDSGRLEVVSEGG
Number of Associated Samples	73
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.54 %
% of genes near scaffold ends (potentially truncated)	22.76 %
% of genes from short scaffolds (< 2000 bps)	70.73 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.724 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (53.658 % of family members)
Environment Ontology (ENVO)	Unclassified (82.927 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.683 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.26% β-sheet: 38.04% Coil/Unstructured: 58.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00462	Glutaredoxin	4.88
PF07728	AAA_5	1.63
PF03796	DnaB_C	0.81
PF04545	Sigma70_r4	0.81
PF13365	Trypsin_2	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.81
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.93 %
Unclassified	root	N/A	17.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.72 %
Viruses	superkingdom	All Organisms → Viruses	25.20 %
Unclassified	root	N/A	17.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.39 %
Unclassified	root	N/A	17.07 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.81 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.39 %
Unclassified	root	N/A	17.07 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	14.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.76 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.81 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.39 %
Unclassified	root	N/A	17.07 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	11.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.32 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3.25 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.81 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.39 %
Unclassified	root	N/A	17.07 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	11.38 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	3.25 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.25 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2.44 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.81 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.39 %
Unclassified	root	N/A	17.07 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	11.38 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.25 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.25 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2.44 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.81 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.39 %
Unclassified	root	N/A	17.07 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	11.38 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	3.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.25 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	2.44 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.81 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.39 %
Unclassified	root	N/A	17.07 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	11.38 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.25 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2.44 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.81 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.39 %
Unclassified	root	N/A	17.07 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	11.38 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.25 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2.44 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10006250	Not Available	8292	Open in IMG/M
3300002231\|KVRMV2_101261559	All Organisms → Viruses → Predicted Viral	1323	Open in IMG/M
3300002514\|JGI25133J35611_10012727	All Organisms → cellular organisms → Bacteria	3588	Open in IMG/M
3300002514\|JGI25133J35611_10016256	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	3065	Open in IMG/M
3300002514\|JGI25133J35611_10153481	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300002514\|JGI25133J35611_10208365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	509	Open in IMG/M
3300002760\|JGI25136J39404_1047131	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	798	Open in IMG/M
3300006565\|Ga0100228_1055849	All Organisms → Viruses → Predicted Viral	1593	Open in IMG/M
3300006565\|Ga0100228_1259771	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006735\|Ga0098038_1034387	All Organisms → Viruses → Predicted Viral	1881	Open in IMG/M
3300006735\|Ga0098038_1075765	All Organisms → Viruses → Predicted Viral	1184	Open in IMG/M
3300006735\|Ga0098038_1090000	All Organisms → Viruses → Predicted Viral	1067	Open in IMG/M
3300006735\|Ga0098038_1173017	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300006735\|Ga0098038_1216497	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300006751\|Ga0098040_1001754	All Organisms → cellular organisms → Bacteria	9157	Open in IMG/M
3300006751\|Ga0098040_1026667	All Organisms → Viruses → Predicted Viral	1860	Open in IMG/M
3300006751\|Ga0098040_1072716	All Organisms → Viruses → Predicted Viral	1051	Open in IMG/M
3300006751\|Ga0098040_1129404	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300006752\|Ga0098048_1091876	Not Available	922	Open in IMG/M
3300006752\|Ga0098048_1127352	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300006754\|Ga0098044_1285380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	634	Open in IMG/M
3300006789\|Ga0098054_1122229	Not Available	968	Open in IMG/M
3300006793\|Ga0098055_1379099	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300006793\|Ga0098055_1405171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	505	Open in IMG/M
3300006921\|Ga0098060_1000828	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	13172	Open in IMG/M
3300006928\|Ga0098041_1098842	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	943	Open in IMG/M
3300006929\|Ga0098036_1199386	Not Available	608	Open in IMG/M
3300007510\|Ga0105013_1020229	All Organisms → cellular organisms → Bacteria	8723	Open in IMG/M
3300007511\|Ga0105000_1036735	Not Available	5021	Open in IMG/M
3300007963\|Ga0110931_1093949	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	905	Open in IMG/M
3300009058\|Ga0102854_1228873	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300009071\|Ga0115566_10010700	Not Available	6974	Open in IMG/M
3300009071\|Ga0115566_10670086	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300009128\|Ga0118727_1181063	All Organisms → Viruses → Predicted Viral	1432	Open in IMG/M
3300009433\|Ga0115545_1000594	Not Available	19546	Open in IMG/M
3300009435\|Ga0115546_1004895	Not Available	6983	Open in IMG/M
3300009435\|Ga0115546_1171008	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300009593\|Ga0115011_10165766	All Organisms → Viruses → Predicted Viral	1612	Open in IMG/M
3300009593\|Ga0115011_10930976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	730	Open in IMG/M
3300009593\|Ga0115011_11407297	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009593\|Ga0115011_12194025	Not Available	509	Open in IMG/M
3300009790\|Ga0115012_10026109	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	3737	Open in IMG/M
3300009790\|Ga0115012_10069701	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2399	Open in IMG/M
3300009790\|Ga0115012_10100017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2027	Open in IMG/M
3300010148\|Ga0098043_1030826	All Organisms → Viruses → Predicted Viral	1688	Open in IMG/M
3300010148\|Ga0098043_1169394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	613	Open in IMG/M
3300010148\|Ga0098043_1217805	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300010150\|Ga0098056_1162192	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300010150\|Ga0098056_1162936	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300010153\|Ga0098059_1197138	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300011253\|Ga0151671_1085062	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300012950\|Ga0163108_10697079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	656	Open in IMG/M
3300012952\|Ga0163180_10603201	Not Available	836	Open in IMG/M
3300012953\|Ga0163179_10512947	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300012953\|Ga0163179_10578449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	939	Open in IMG/M
3300012953\|Ga0163179_11544129	Not Available	599	Open in IMG/M
3300017697\|Ga0180120_10375214	Not Available	560	Open in IMG/M
3300017705\|Ga0181372_1006929	All Organisms → Viruses → Predicted Viral	2130	Open in IMG/M
3300017706\|Ga0181377_1016189	All Organisms → Viruses → Predicted Viral	1688	Open in IMG/M
3300017708\|Ga0181369_1124238	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300017713\|Ga0181391_1081652	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300017731\|Ga0181416_1152410	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300017738\|Ga0181428_1045077	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300017748\|Ga0181393_1070111	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300017759\|Ga0181414_1083873	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	842	Open in IMG/M
3300017770\|Ga0187217_1171640	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300017773\|Ga0181386_1198449	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300017775\|Ga0181432_1048017	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300020165\|Ga0206125_10000057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	142028	Open in IMG/M
3300020165\|Ga0206125_10004704	All Organisms → cellular organisms → Bacteria	11908	Open in IMG/M
3300020165\|Ga0206125_10008421	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	7802	Open in IMG/M
3300020165\|Ga0206125_10050655	All Organisms → Viruses → Predicted Viral	2019	Open in IMG/M
3300020175\|Ga0206124_10042527	Not Available	2041	Open in IMG/M
3300020182\|Ga0206129_10160738	All Organisms → Viruses → Predicted Viral	1048	Open in IMG/M
3300020182\|Ga0206129_10247902	Not Available	750	Open in IMG/M
3300020403\|Ga0211532_10167817	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300020419\|Ga0211512_10097437	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1378	Open in IMG/M
3300020428\|Ga0211521_10026939	All Organisms → Viruses → Predicted Viral	3200	Open in IMG/M
3300020428\|Ga0211521_10116502	All Organisms → Viruses → Predicted Viral	1275	Open in IMG/M
3300020428\|Ga0211521_10217863	Not Available	867	Open in IMG/M
3300020438\|Ga0211576_10036037	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M
3300020438\|Ga0211576_10041722	All Organisms → Viruses → Predicted Viral	2661	Open in IMG/M
3300020470\|Ga0211543_10003078	All Organisms → cellular organisms → Bacteria	10719	Open in IMG/M
3300020472\|Ga0211579_10000626	Not Available	28359	Open in IMG/M
3300020472\|Ga0211579_10652041	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300025084\|Ga0208298_1005132	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	3733	Open in IMG/M
3300025096\|Ga0208011_1023716	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1555	Open in IMG/M
3300025096\|Ga0208011_1026569	All Organisms → Viruses → Predicted Viral	1445	Open in IMG/M
3300025099\|Ga0208669_1005186	All Organisms → Viruses → Predicted Viral	4033	Open in IMG/M
3300025099\|Ga0208669_1011688	Not Available	2426	Open in IMG/M
3300025102\|Ga0208666_1024021	All Organisms → Viruses → Predicted Viral	1902	Open in IMG/M
3300025102\|Ga0208666_1086576	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300025118\|Ga0208790_1046240	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1382	Open in IMG/M
3300025128\|Ga0208919_1024452	All Organisms → Viruses → Predicted Viral	2234	Open in IMG/M
3300025128\|Ga0208919_1024469	All Organisms → Viruses → Predicted Viral	2233	Open in IMG/M
3300025128\|Ga0208919_1120963	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300025128\|Ga0208919_1176588	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300025131\|Ga0209128_1028890	All Organisms → cellular organisms → Bacteria → Proteobacteria	2282	Open in IMG/M
3300025131\|Ga0209128_1064455	All Organisms → Viruses → Predicted Viral	1281	Open in IMG/M
3300025131\|Ga0209128_1194364	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300025132\|Ga0209232_1001198	All Organisms → cellular organisms → Bacteria	14339	Open in IMG/M
3300025132\|Ga0209232_1005446	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	5642	Open in IMG/M
3300025141\|Ga0209756_1018444	All Organisms → Viruses → Predicted Viral	4139	Open in IMG/M
3300025141\|Ga0209756_1023276	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	3514	Open in IMG/M
3300025141\|Ga0209756_1130404	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300025141\|Ga0209756_1267097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	619	Open in IMG/M
3300025168\|Ga0209337_1058324	All Organisms → Viruses → Predicted Viral	1962	Open in IMG/M
3300025168\|Ga0209337_1088142	All Organisms → Viruses → Predicted Viral	1482	Open in IMG/M
3300025508\|Ga0208148_1071114	Not Available	806	Open in IMG/M
3300025816\|Ga0209193_1002369	Not Available	8836	Open in IMG/M
3300025873\|Ga0209757_10052656	All Organisms → Viruses → Predicted Viral	1197	Open in IMG/M
3300027906\|Ga0209404_10170797	All Organisms → Viruses → Predicted Viral	1333	Open in IMG/M
3300027906\|Ga0209404_10542168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300028022\|Ga0256382_1120138	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300028022\|Ga0256382_1160544	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300031766\|Ga0315322_10201709	All Organisms → Viruses → Predicted Viral	1395	Open in IMG/M
3300031766\|Ga0315322_10471399	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	826	Open in IMG/M
3300031774\|Ga0315331_10139205	All Organisms → Viruses → Predicted Viral	1808	Open in IMG/M
3300031774\|Ga0315331_10586593	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300031775\|Ga0315326_10423084	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300032011\|Ga0315316_11445415	Not Available	543	Open in IMG/M
3300032032\|Ga0315327_10931133	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300032073\|Ga0315315_10165241	Not Available	2066	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	59.35%
Pelagic	Environmental → Aquatic → Marine → Pelagic	12.20%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.13%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.32%
Strait	Environmental → Aquatic → Marine → Strait	6.50%
Coastal	Environmental → Aquatic → Marine → Coastal	4.88%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.81%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	56.91%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	12.20%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.13%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.50%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.50%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.88%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.44%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.81%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.81%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.81%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	53.66%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.13%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	7.32%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	6.50%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.50%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	4.88%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.25%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.25%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.63%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.81%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.81%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.81%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.81%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.81%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007510	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300007511	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009128	Combined Assembly of Gp0137084, Gp0137083	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300011253	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeate	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025508	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300031766	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_1000625025	3300000101	Marine	VKVGDLVKYESALNDSMDHYTVEHGLVIQISKTGHDTISAQVLFNGGETWWVDSGRLEIVSEAG*
KVRMV2_1012615595	3300002231	Marine Sediment	MKVGDLVKLESALNDDMDHHSVEHGLVVQLSKTGHDTTSAQVLFNDGELWWVDSGRLEVVSEGG*
JGI25133J35611_1001272713	3300002514	Marine	VVLFFKKWVKMKVGDLVKFDNRMDMLETNPRIEHGLVVQISKTGHDTISAQVLFKDGDTWWVDSGRLEVVSESG*
JGI25133J35611_100162563	3300002514	Marine	VRVGDLVKFESEIADDMDRYSSDHGVVVQLSKTGHDTVSAQVLFSDGQLWWVGSQRLVVISEGG*
JGI25133J35611_101534812	3300002514	Marine	VKVGDLVKFESELADDMDRYSVDHGLVIQLSKTGHDTISVQVLFGDGESWWVDSGRLVVVSEAGR*
JGI25133J35611_102083651	3300002514	Marine	MKVGDLVKFDSDLENDVFETNPRIEHGLVVQISKTGHNTISAQVLFKDGELWWVDSGRLEIINESR*
JGI25136J39404_10471313	3300002760	Marine	MRLLFVTRSQMKVGDLVKFESVMRDDMDRYTAEHGLVVKMSKTGHETESAQVLFNDGETGWIDTQRLVVVSESR*
Ga0100228_10558497	3300006565	Marine	VKVGDLVKYESAMNDSMDRYTVEYGLVMQISKTGHDTIAAQVLFGDTGKPCWIDSGK
Ga0100228_12597712	3300006565	Marine	VKVGDLVKFESVLNDSMDRYSAEYGLVMQLSKTGHDTISVQVLFGDGEPWWVDSGKLVVISERG*
Ga0098038_10343872	3300006735	Marine	MKVGDLVKFENALARDVFETDPSREHGLVVQISKTGHDTVSAQVIFNDGELWWVDSGRLEVISEGR*
Ga0098038_10757654	3300006735	Marine	MKVGDLVKYESVLNDSMDRYTVEYGLVVQLSKTGHDTLSVQVLFGDTGKPCWLDSGKLVVVSEAG*
Ga0098038_10900005	3300006735	Marine	MKVGDLVKFESMVEKEVFETDPSRNHGLVVQISKTGHDTISAQVLFNDGELWWVDSGRLEVTSEAG*
Ga0098038_11730173	3300006735	Marine	VKVGDLVKFDSSLERDVFETSPCIEHGLVVQISKTGHDTTSAQVMFIDGELWWVDSEKLEVVSEGR*
Ga0098038_12164973	3300006735	Marine	MRVGDLVKFESVLNDSMDHHTVEHGLVMQLSKTGHNTLSAQVLFNDGETWWVDSGRLEVVSESR*
Ga0098040_100175424	3300006751	Marine	MKVGDLVKFESALERDVFETDPRIEHGLVVQISKTGHDTTSAQVMFNDGSLWWVDSGRLEVISEGR*
Ga0098040_10266673	3300006751	Marine	MKVGDLVKFESALNDDMDRDTVEHGLVVQISKTGHDTISAQILFNDGELWWVDSGRLAVVSEAG*
Ga0098040_10727165	3300006751	Marine	MKVGDLVKFESQLSDDELGDSGRTEHGLVVQISKTGHDTTSAQVLFNDGETWWVDSGRLEIINGSR*
Ga0098040_11294042	3300006751	Marine	VKVGDLVKFESALNDDMDRYTADHGIVIQISKTGHDTTSAHVLFGDGEPWWVDSSRLVVISEGR*
Ga0098048_10918764	3300006752	Marine	MKVGDLVKFDNALARDVFETDPSREHGLVVQISKTGHDTVSAQVIFNDGELWWVDSGRLEVISEGR*
Ga0098048_11273521	3300006752	Marine	MNVGDLVRFESALNDDMDRYTVEHGLVVQISKTGHDTISAQILFNDGELWWVDSGRLAV
Ga0098044_12853802	3300006754	Marine	MKVGDLVKLESEMFDDMDRQTVHYGLIVQLSKTGHDTTSAQVLFNDGEPWWVDSSRLTVLSES
Ga0098054_11222294	3300006789	Marine	MKVGDLVKFDNRMDMLETNPRIEHGLVVQISKTGHDTISAQVLFKDGETWWVDSGRLEVVSESG*
Ga0098055_13790992	3300006793	Marine	VKVGDLVRFESALNDDMDRYTVEHGLVVQISKTGHDTISAQILFNDGELWWVDSGRLAVVSEAG*
Ga0098055_14051712	3300006793	Marine	MKMGDLVKFESVLERDVFETDPSRNHGLVVQISKTGHDTISAQVLFNDGELWWVDSGRLEIVNESR*
Ga0098060_100082827	3300006921	Marine	VKVGDLVKLESALNDSMDHYSVEHGLVVQISKTGHDTLSAQVLFNDGETWWVDSGRLEVLSEGR*
Ga0098041_10988421	3300006928	Marine	GDLVKFESVLNDSMDRHTVEHGLVVQLSKTGHDTLSAQVLFNDGETWWVDSGRLEVVSESR*
Ga0098036_11993862	3300006929	Marine	MKVGDLVKFESVLEKEVFETDPSRNHGLVVQISKTGHDTTSAQVLFNDGETWWVDSGRLKVISENR*
Ga0105013_102022917	3300007510	Marine	VKAGDLVKFDSDLEFDVFEANPRTEHGLVIQISKTGHDTVSAQVLFNDGETWWVDSGRLEVVSESR*
Ga0105000_10367359	3300007511	Marine	VGFDGMKVGDLVRFISVLEKEVFETDPPRNYGLVVQLSKTGHNTKSAQVMFNDGETWWVDSGRLEVVSESR*
Ga0110931_10939493	3300007963	Marine	MKVGDLVKCESVLEKEVFETDPYRHHGLVVQISKTGHDTTSAQVLFNDGETWWVDSGRLEIVSGRKKD*
Ga0102854_12288732	3300009058	Estuarine	MKVGDLVRFESALNDSMDHYTVEHGLVTQISKTGHDTISAQVLFNDGETWWIDSGKLEVISEAG*
Ga0115566_100107006	3300009071	Pelagic Marine	MVRVQCSFLDDFAVKVGDLVKFESVLNDSMDHHTVEHGLVIQLSKTGHDTLSAQVLFNDGETWWVDSGRLEVVSESR*
Ga0115566_106700861	3300009071	Pelagic Marine	MKVGDLVKFESALNDSMDHYSVEHGLVVQISKTGHDTLSAQVLFNDGETWWVDSGRLEVVSGTGQ*
Ga0118727_11810634	3300009128	Marine	MKVGDLVKFESALNDDMDRYTADHGIVIQISKTGHDTTSAQVLFGDGEPWWVDSSRLMVISEAGR*
Ga0115545_100059435	3300009433	Pelagic Marine	MFESALNDSMDHYTVEHGLVVQISKTGHDTISAQVLFNDGETWWVDSGRLEIVSESR*
Ga0115546_100489524	3300009435	Pelagic Marine	VKVGDLVMFESALNDSMDHYTVEHGLVVQISKTGHDTISAQVLFNDGETWWVDSGRLEIVSESR*
Ga0115546_11710083	3300009435	Pelagic Marine	MKVGDLVKFESALNDSMDHYSVEHGLVVQISKTGHDTLSAQVFFNDGETWWVDSGRLEVV
Ga0115011_101657663	3300009593	Marine	MKVGDLVKFESQLADDMDRYSVEHGLVMQLSKTGHDTMSVQVLFGDGEPWWVDSGRLVVVSEAG*
Ga0115011_109309763	3300009593	Marine	MKVGDLVKFESVLEKEVSETDPSRNHGLVVQISKTGHDTISAQVLFNDGELWWVDSGRLEVTSEGR*
Ga0115011_114072973	3300009593	Marine	MKVGDLVKFESVLEKEVFETDPSRNHGLVVQISKTGHDTTSAQILFNDGETWW
Ga0115011_121940252	3300009593	Marine	VGDLVKLEREMVDDMDRHSVEHGLVVQISKTGHDTISAQVLFNDGEVWWVDSGRLGVVS
Ga0115012_100261095	3300009790	Marine	MKVGDLVKFESVLNDSMDHHTVEHGLVIQLSKTGHDTLSAQVLFNDGETWWVDSGRLEVVSESR*
Ga0115012_1006970110	3300009790	Marine	MKVGDLVKYESVLNDSMDRYTVEYGLVMQLSKTGHDTLSVQVFFGDTARPCWVDSGKLVVVSEAG*
Ga0115012_101000177	3300009790	Marine	VRVGDLVKYESALNDSMDHYTVEYGLVIKMSKTGHDTTSAQVLFKNEDPCWMDTRRLVVVSESR*
Ga0098043_10308263	3300010148	Marine	MKVGDLVKYESVLNDSMDHYTVEHGLVIQISKTGHDTTSAQVLFNDGETWWVDSGRLEIISENR*
Ga0098043_11693943	3300010148	Marine	VGDLVKFESVLNDSMDRHTVEHGLVVQLSKTGHDTLSIQVLFNNGETWWVDSGRLEVVSESR*
Ga0098043_12178053	3300010148	Marine	LVKYESVLNDSMDRYTVEYGLVVQLSKTGHDTLSVQVLFGDTGKPCWLDSGKLVVVSEAG
Ga0098056_11621923	3300010150	Marine	VKVGDLVRFESALNDDMDRYTVEHGLVVQISKTGYDTTSAQILFNDGELWWVDSGRLEI
Ga0098056_11629362	3300010150	Marine	MKVGDLVKFDNRMDMLETNPRIEHGLVVQISKTGHDTISAQVLFKDGDTWWVDSGRLEVVSESG*
Ga0098059_11971383	3300010153	Marine	MKVGDLVKFDNRMDMLETNPRIEHGLVVQISKTGHDTISAQVLFKDGDTWWVDSGRLEVESESG*
Ga0151671_10850623	3300011253	Marine	MKVGDLVKFESAFNDSMDHYTVEHGLVVQISKTGHDTVSAQVLFNDGEAWWVDSGKLEVVSEAGR*
Ga0163108_106970793	3300012950	Seawater	MKVGDLVKFESALERDVFETDPRIEHGLVVQISKTGHDTTSAQVLFIDGETWWVDSGRLEVISVAG*
Ga0163180_106032011	3300012952	Seawater	VKFDNNMENLVFETEPHIEHGLVVQLSRTGHDTISVQVMFGDGELWWVDSGKLEVISESR
Ga0163179_105129472	3300012953	Seawater	MKVGDLVKFESVLNDSMDHHTVEHGLVMQLSKTGHDTLSAQVLFNDGDTWWVDSGRLEVISESR*
Ga0163179_105784494	3300012953	Seawater	DLVKFDTTMERDVFETDPRINHGLVVQISKTGHTTTSAQVKFFDGELWWVDSERLEVVSEGR*
Ga0163179_115441292	3300012953	Seawater	MKVGDLVKYDSDLESDVFETDPNIEHGLVVQISKTGHDTTSAQVLFNDGETWWVDSGRLEVISEGR*
Ga0180120_103752142	3300017697	Freshwater To Marine Saline Gradient	MKVGELVKFESALERDVFEADPRREHGLVVQISKTGHDTTSAQVIFNDGELWWVDSGKLEVISESR
Ga0181372_10069296	3300017705	Marine	VKAGDLVKFDSDLESDVFEANPRTEHGLVIQISKTGHDTVSAQVLFNDGETWWVDSGRLEVVSESR
Ga0181377_10161897	3300017706	Marine	VKVGDLVKFESVLNDSMDRYTVEHGLVIQLSKTGHDTLSIQVLFNNGETWWVDSGRLEVVSESR
Ga0181369_11242381	3300017708	Marine	VKVGDLVKFESVLNDSMDHHTVEHGLVIQLSKTGHDTLSIQVLFNNGETWWVDSGRLEVVSESR
Ga0181391_10816523	3300017713	Seawater	VKVGDLVKYESALNDSMDHYTVEHGLVIQISKTGHDTISAQVLFNDGETWWVDSGRLEIVNEAGR
Ga0181416_11524103	3300017731	Seawater	MKVGDLVKFENALVRDVFETDPSREHGLVVQISKTGHDTVSARVLFNDGETWWVDSGRLEVVSEAG
Ga0181428_10450775	3300017738	Seawater	VKVGDLVKFESVLNDSMDHYTVEHGLVIQLSKTGHDTLSAQVLFNDGETWWVDSGRL
Ga0181393_10701111	3300017748	Seawater	CESRLCLYILVRIQCLILGDTTMKVGDLVKFESAFNDSMDRYSVEHGLVVQISKTGHDTLSAQVLFNGGETWWVDSGRLEIVNEAGR
Ga0181414_10838733	3300017759	Seawater	DFHLCFLVRVQCSFLDDIAVKVGDLVKFESVLNDSMDYHTVEHGLVIQLSKTGHDTLSAQVLFNDGETWWVDSGRLEVVSESR
Ga0187217_11716404	3300017770	Seawater	KYESALNDSMDHYTVEHGLVIQISKTGHDTISAQVLFNGGETWWVDSGRLEVVSGTGQ
Ga0181386_11984491	3300017773	Seawater	MDHYTVEHGLVIQISKTGHDTISAQVLFNGGETWWVDSGRLEIVNEAGR
Ga0181432_10480175	3300017775	Seawater	MKVGDLVKFESVMRDDMDRYTAEHGLVVKMSKTGHDTESAQVLFNDGETGWIDTQRLVVVSESR
Ga0206125_10000057149	3300020165	Seawater	MKVGDLVRFESALNDSMDHYTVEHGLVTQISKTGHDTISAQVLFNDGETWWVDSGRLEVISEAG
Ga0206125_1000470423	3300020165	Seawater	MVRVQCSFLDDFAVKVGDLVKFESVLNDSMDHHTVEHGLVIQLSKTGHDTLSAQVLFNDGETWWVDSGRLEVVSESR
Ga0206125_1000842115	3300020165	Seawater	MKVGDLVKFESALERDVFEADPRREHGLVVQISKTGHDTTSAQVIFNDGELWWVDSGKLEVISESR
Ga0206125_100506559	3300020165	Seawater	MKVGDLVKFESALERDVFETDPRREHGLVVQISKTGHDTVSAQVLFNDGETWWVDSGKLEVVSEAG
Ga0206124_100425274	3300020175	Seawater	MKVGDLVKFESALERDVFEGDPRREHGLVVQISKTGHDTTSAQVIFNDGELWWVDSGKLEVISESR
Ga0206129_101607384	3300020182	Seawater	SFLDDFAVKVGDLVKFESVLNDSMDHHTVEHGLVIQLSKTGHDTLSAQVLFNDGETWWVDSGRLEVVSESR
Ga0206129_102479021	3300020182	Seawater	YFLDDTAMKVGDLVKFESALERDVFEADPRREHGLVVQISKTGHDTTSAQVIFNDGELWWVDSGKLEVISESR
Ga0211532_101678174	3300020403	Marine	VKVGDLVKYESVLNDSMDRHTVEYGLVIQISKTGHDTLSAQVLFNDTGKPCWIDSQKLVVVSEAG
Ga0211512_100974373	3300020419	Marine	MKVGDLVKFESVLNDSMDHHTVEHGLVMQLSKTGHDTLSAQVLFNDGDTWWVDSGRLEVISESR
Ga0211521_100269395	3300020428	Marine	MFEGDSLDTSEYGLVLQISKTGHDTISAQVLFNDGDTWWIDSEKLEVASEGYKA
Ga0211521_101165023	3300020428	Marine	MKIGDLVKYESVLNDSMDRYTVEYGLVMQLSKTGHDTLSVQVLFGDTGRPCWVDSGKLVVISEVG
Ga0211521_102178631	3300020428	Marine	VKVGDLVKYESALNDSMDHYTVEHGLVIQISKTGHDTISAQVLFNGGETWWVDSGRLEI
Ga0211576_100360374	3300020438	Marine	VKVGDLVKFESVLNDSMDHYTVEHGLVIQLSKTGHDTLSAQVLFNDGETWWVDSGRLEVISESR
Ga0211576_100417227	3300020438	Marine	MKVGDLVKFNGDLELDVFEANPRIEHGLVIQISRTGYSSTSAQILFKDGQTWWVDSERLEVISEAGR
Ga0211543_1000307822	3300020470	Marine	VKVGDLVKWESELVDDMDRQAVEYGLIIQLSKTGHNTTSAQVLFNDGEPWWVDTSRLVVINESG
Ga0211579_1000062644	3300020472	Marine	MKIGDLVKFESELVDDMDHHSAQYGLVMQLSKTGHDTTSVQVLFTDGDPWWVDSSRLVVVNESGR
Ga0211579_106520413	3300020472	Marine	VKVGDLVKFESVLNDSMDRYSTEYGLVMQLSKTGHDTISAQVWFGDTQKQCWLDSSSLVVVSEAGK
Ga0208298_100513212	3300025084	Marine	MKVGDLVKFDNALARDVFETDPSREHGLVVQISKTGHDTVSAQVIFNDGELWWVDSGRLEVISEGR
Ga0208011_10237164	3300025096	Marine	MKVGDLVKFESALERDVFETDPRIEHGLVVQISKTGHDTTSAQVMFNDGSLWWVDSGRLEVISEGR
Ga0208011_10265695	3300025096	Marine	MKVGDLVKFESALNDDMDRDTVEHGLVVQISKTGHDTISAQILFNDGELWWVDSGRLAVVSEAG
Ga0208669_100518615	3300025099	Marine	VKVGDLVKLESALNDSMDHYSVEHGLVVQISKTGHDTLSAQVLFNDGETWWVDSGRLEVLSEGR
Ga0208669_101168810	3300025099	Marine	MKVGDLVKFENALARDVFETDPSREHGLVVQISKTGHDTVSAQVIFNDGELWWVDSGRLEVISEGR
Ga0208666_10240218	3300025102	Marine	MRVGDLVKFENALARDVFETDPSREHGLVVQISKTGHDTVSAQVIFNDGELWWVDSGRLEVISEGR
Ga0208666_10865762	3300025102	Marine	MKVGDLVKYESVLNDSMDRYTVEYGLVVQLSKTGHDTLSVQVLFGDTGKPCWLDSGKLVVVSEAG
Ga0208790_10462402	3300025118	Marine	MKVGDLVKLESEMFDDMDRQTVHYGLIVQLSKTGHDTTSAQVLFNDGEPWWVDS
Ga0208919_10244521	3300025128	Marine	CKIQLLFVTRSQMKVGDLVKFDSDLENDVFETNPRIEHGLVVQISKTGHDTLSAQVLFKDGELWWVDSGRLEVISETGRFG
Ga0208919_10244696	3300025128	Marine	VKVGDLVRFESALNDDMDRYTVEHGLVVQISKTGHDTISAQILFNDGELWWVDSGRLAVVSEAG
Ga0208919_11209632	3300025128	Marine	MQNTRLDRASMKVGDLVKYESVLNDSMDHYTVEHGLVIQISKTGHDTTSAQVLFNDGETWWVDSGRLEIISENR
Ga0208919_11765882	3300025128	Marine	MKVGDLVKFESVLEKEVFETDPSRNHGLVVQISKTGHDTTSAQVLFNDGETWWVDSGRLKVISENR
Ga0209128_102889010	3300025131	Marine	VVLFFKKWVKMKVGDLVKFDNRMDMLETNPRIEHGLVVQISKTGHDTISAQVLFKDGDTWWVDSGRLEVVSESG
Ga0209128_10644553	3300025131	Marine	MKVGDLVKFESALNDDMDRYTVEHGLVVQISKTGHDTISAQILFNDGELWWVDSGRLAVVSEAG
Ga0209128_11943643	3300025131	Marine	VRVGDLVKFESEISDDMDRYSSDHGVVVQLSKTGHDTVSAQVLFSDGQLWWVGSQ
Ga0209232_100119823	3300025132	Marine	MKVGDLVKFESMVEKEVFETDPSRNHGLVVQISKTGHDTISAQVLFNDGELWWVDSGRLEVTSEAG
Ga0209232_100544617	3300025132	Marine	VKVGDLVKFESVLNDSMDYHTVEHGLVIQLSKTGHDTLSAQVLFNDGETWWVDSGRLEVVSESR
Ga0209756_101844417	3300025141	Marine	VKVGDLVKFESELADDMDRYSVDHGLVIQLSKTGHDTISVQVLFGDGESWWVDSGRLVVVSEAGR
Ga0209756_10232766	3300025141	Marine	VRVGDLVKFESEIADDMDRYSSDHGVVVQLSKTGHDTVSAQVLFSDGQLWWVGSQRLVVISEGG
Ga0209756_11304043	3300025141	Marine	VKVGDLVKFDSELEHDVFETNPRIEHGLVVQVSKTGHDTISAQVLFNDGETWWVDSGRLEVVSEGR
Ga0209756_12670971	3300025141	Marine	PMKVGDLVKFDSDLENDVFETNPRIEHGLVVQISKTGHNTISAQVLFKDGELWWVDSGRLEIINESR
Ga0209337_10583248	3300025168	Marine	VKVGDLVKYESALNDSMDHYTVEHGLVIQISKTGHDTISAQVLFNGGETWWVDSGRLEIVNEAGR
Ga0209337_10881423	3300025168	Marine	MKVGDLVRFESALNDSMDHYTVEHGLVTQISKTGHDTISAQVLFNDGETWWIDSGKLEVISEAG
Ga0208148_10711141	3300025508	Aqueous	VKVGDLVKYESALNDSMDHYTVEHGLVIQISKTGHDTISAQVLFNGGETWWVDSGRLEIVSEAG
Ga0209193_10023695	3300025816	Pelagic Marine	VKVGDLVMFESALNDSMDHYTVEHGLVVQISKTGHDTISAQVLFNDGETWWVDSGRLEIVSESR
Ga0209757_100526564	3300025873	Marine	MRLLFVTRSQMKVGDLVKFESVMRDDMDRYTAEHGLVVKMSKTGHETESAQVLFNDGETGWIDTQRLVVVSESR
Ga0209404_101707973	3300027906	Marine	MKVGDLVKFESQLADDMDRYSVEHGLVMQLSKTGHDTMSVQVLFGDGEPWWVDSGRLVVVSEAG
Ga0209404_105421682	3300027906	Marine	MKVGDLVKFESVLEKEVSETDPSRNHGLVVQISKTGHDTISAQVLFNDGELWWVDSGRLEVTSEGR
Ga0256382_11201381	3300028022	Seawater	MKVGDLVKFESALNDDMDHHSVEHGLVVQLSKTGHDTTSAQVLFNDGELWWVDSGRLEVVSEGG
Ga0256382_11605443	3300028022	Seawater	MKAGDLVKFESALNDSMDRYTVEHGLVVQISKTGHDTISAQVLFNDGELWWVDSGKLEVVSEAG
Ga0315322_102017092	3300031766	Seawater	MKVGDLVKFESAFNDSMDRYSVEHGLVVQISKTGHDTLSAQVLFNDGETWWVDSGRLEVVSGTGQ
Ga0315322_104713991	3300031766	Seawater	VKVGDLVKLESALNDSMDHYTVEHGLIVQLSKTGHDTLSAQVLFNDGETWWVDSERLEIVSESRR
Ga0315331_101392058	3300031774	Seawater	MMKVGDLVKFESDLVDDMDRHSADYGLVLQVSKTGHDTVSAQVLFGDGEPWWVDSGRLVVVSAAG
Ga0315331_105865934	3300031774	Seawater	VKVGDLVKFESELADDMDRYSVDHGLVIQLSKTGHDTMSVQVLFGDGEPWWVDSGRLVVVSEAGR
Ga0315326_104230845	3300031775	Seawater	KFESELADDMDRYSVDHGLVIQLSKTGHDTMSVQVLFGDGEPWWVDSGRLVVVSEAGR
Ga0315316_114454153	3300032011	Seawater	KVGDLVKFESALERDVFETDPRREHGLVVQISKTGHDTVSAQVIFNDGELWWVDSGRLEVISEGR
Ga0315327_109311331	3300032032	Seawater	VKVGDLVKLESALNDSMDHYTVEHGLIVQLSKTGHDTLSAQVLFNDGETWWVDSERLEIV
Ga0315315_101652415	3300032073	Seawater	MKVGDLVKFENALVRDVFETDPSREHGLVVQISKTGHDTISAQVIFNDGELWWVDSGRLEVISEGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070089

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences