NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F070170

Metagenome Family F070170

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070170
Family Type Metagenome
Number of Sequences 123
Average Sequence Length 50 residues
Representative Sequence MGNRDVFDGDASVFAEVPKMVPSECSSEVGDNAVRETESMDDIFEEL
Number of Associated Samples 60
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 7.37 %
% of genes near scaffold ends (potentially truncated) 56.91 %
% of genes from short scaffolds (< 2000 bps) 77.24 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction Yes
3D model pTM-score0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Eukaryota (52.033 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(94.309 % of family members)
Environment Ontology (ENVO) Unclassified
(94.309 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(94.309 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.03 %
UnclassifiedrootN/A47.97 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006358|Ga0068871_101992421All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta553Open in IMG/M
3300011119|Ga0105246_11424851All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta647Open in IMG/M
3300013297|Ga0157378_11677922All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta682Open in IMG/M
3300013297|Ga0157378_13240084All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta506Open in IMG/M
3300015274|Ga0182188_1052070All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta528Open in IMG/M
3300015274|Ga0182188_1057883All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta513Open in IMG/M
3300015275|Ga0182172_1036372Not Available625Open in IMG/M
3300015275|Ga0182172_1071819All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta513Open in IMG/M
3300015276|Ga0182170_1041492Not Available604Open in IMG/M
3300015277|Ga0182128_1022265Not Available720Open in IMG/M
3300015277|Ga0182128_1043006Not Available601Open in IMG/M
3300015277|Ga0182128_1070005Not Available522Open in IMG/M
3300015282|Ga0182124_1019607All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta751Open in IMG/M
3300015283|Ga0182156_1087614Not Available502Open in IMG/M
3300015286|Ga0182176_1079000All Organisms → cellular organisms → Eukaryota516Open in IMG/M
3300015288|Ga0182173_1058434All Organisms → cellular organisms → Eukaryota565Open in IMG/M
3300015289|Ga0182138_1027817All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta703Open in IMG/M
3300015296|Ga0182157_1019569All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae816Open in IMG/M
3300015298|Ga0182106_1036031Not Available688Open in IMG/M
3300015299|Ga0182107_1023382All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta782Open in IMG/M
3300015300|Ga0182108_1105543Not Available504Open in IMG/M
3300015303|Ga0182123_1042318Not Available643Open in IMG/M
3300015303|Ga0182123_1051027Not Available610Open in IMG/M
3300015304|Ga0182112_1074850Not Available560Open in IMG/M
3300015307|Ga0182144_1072574All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta570Open in IMG/M
3300015308|Ga0182142_1046345All Organisms → cellular organisms → Eukaryota663Open in IMG/M
3300015308|Ga0182142_1096546All Organisms → cellular organisms → Eukaryota532Open in IMG/M
3300015321|Ga0182127_1024176All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta827Open in IMG/M
3300015321|Ga0182127_1056250Not Available646Open in IMG/M
3300015321|Ga0182127_1075613Not Available591Open in IMG/M
3300015322|Ga0182110_1031623Not Available763Open in IMG/M
3300015322|Ga0182110_1078094Not Available583Open in IMG/M
3300015322|Ga0182110_1110729All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta522Open in IMG/M
3300015322|Ga0182110_1118719All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta510Open in IMG/M
3300015323|Ga0182129_1108991Not Available512Open in IMG/M
3300015341|Ga0182187_1148877Not Available561Open in IMG/M
3300015342|Ga0182109_1165114All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae565Open in IMG/M
3300015343|Ga0182155_1206791All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum519Open in IMG/M
3300015344|Ga0182189_1104997Not Available673Open in IMG/M
3300015344|Ga0182189_1107905All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae667Open in IMG/M
3300015345|Ga0182111_1200476All Organisms → cellular organisms → Eukaryota544Open in IMG/M
3300015346|Ga0182139_1201299Not Available543Open in IMG/M
3300015347|Ga0182177_1220031All Organisms → cellular organisms → Eukaryota527Open in IMG/M
3300015351|Ga0182161_1251561Not Available515Open in IMG/M
3300015355|Ga0182159_1205950All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta635Open in IMG/M
3300015361|Ga0182145_1148689Not Available550Open in IMG/M
3300017404|Ga0182203_1120621All Organisms → cellular organisms → Eukaryota557Open in IMG/M
3300017407|Ga0182220_1085882All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta538Open in IMG/M
3300017410|Ga0182207_1114680Not Available583Open in IMG/M
3300017411|Ga0182208_1034519All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta752Open in IMG/M
3300017411|Ga0182208_1041463All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta713Open in IMG/M
3300017411|Ga0182208_1062784All Organisms → cellular organisms → Eukaryota631Open in IMG/M
3300017411|Ga0182208_1080363All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta585Open in IMG/M
3300017413|Ga0182222_1011128All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta901Open in IMG/M
3300017413|Ga0182222_1036483All Organisms → cellular organisms → Eukaryota667Open in IMG/M
3300017413|Ga0182222_1041896Not Available644Open in IMG/M
3300017413|Ga0182222_1098205All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta515Open in IMG/M
3300017415|Ga0182202_1030035Not Available811Open in IMG/M
3300017417|Ga0182230_1089423Not Available562Open in IMG/M
3300017420|Ga0182228_1088938All Organisms → cellular organisms → Eukaryota576Open in IMG/M
3300017424|Ga0182219_1054625All Organisms → cellular organisms → Eukaryota674Open in IMG/M
3300017424|Ga0182219_1114679All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta536Open in IMG/M
3300017424|Ga0182219_1124364All Organisms → cellular organisms → Eukaryota522Open in IMG/M
3300017424|Ga0182219_1140582All Organisms → cellular organisms → Eukaryota502Open in IMG/M
3300017425|Ga0182224_1130404All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta544Open in IMG/M
3300017427|Ga0182190_1045699All Organisms → cellular organisms → Eukaryota776Open in IMG/M
3300017427|Ga0182190_1052965All Organisms → cellular organisms → Eukaryota740Open in IMG/M
3300017427|Ga0182190_1089541All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta621Open in IMG/M
3300017427|Ga0182190_1115281All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta569Open in IMG/M
3300017427|Ga0182190_1143113All Organisms → cellular organisms → Eukaryota528Open in IMG/M
3300017427|Ga0182190_1147835All Organisms → cellular organisms → Eukaryota522Open in IMG/M
3300017430|Ga0182192_1115566Not Available580Open in IMG/M
3300017430|Ga0182192_1137885All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta545Open in IMG/M
3300017433|Ga0182206_1125760All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta543Open in IMG/M
3300017433|Ga0182206_1128488All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta539Open in IMG/M
3300017438|Ga0182191_1010729All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta1242Open in IMG/M
3300017438|Ga0182191_1070089Not Available693Open in IMG/M
3300017438|Ga0182191_1128840All Organisms → cellular organisms → Eukaryota567Open in IMG/M
3300017442|Ga0182221_1037092All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta801Open in IMG/M
3300017442|Ga0182221_1048747All Organisms → cellular organisms → Eukaryota739Open in IMG/M
3300017442|Ga0182221_1054543Not Available715Open in IMG/M
3300017443|Ga0182193_1114669All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta607Open in IMG/M
3300017680|Ga0182233_1080496All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum591Open in IMG/M
3300017683|Ga0182218_1071358All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta638Open in IMG/M
3300017683|Ga0182218_1120283Not Available543Open in IMG/M
3300017684|Ga0182225_1104270Not Available557Open in IMG/M
3300017684|Ga0182225_1138337All Organisms → cellular organisms → Eukaryota509Open in IMG/M
3300017685|Ga0182227_1095020All Organisms → cellular organisms → Eukaryota575Open in IMG/M
3300017686|Ga0182205_1058542Not Available719Open in IMG/M
3300017686|Ga0182205_1087089All Organisms → cellular organisms → Eukaryota632Open in IMG/M
3300017686|Ga0182205_1113827All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta578Open in IMG/M
3300017686|Ga0182205_1138005All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae541Open in IMG/M
3300017686|Ga0182205_1172267All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta501Open in IMG/M
3300017689|Ga0182231_1083015All Organisms → cellular organisms → Eukaryota612Open in IMG/M
3300025927|Ga0207687_11809945All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta523Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere94.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.63%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015269Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015274Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015275Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015276Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015277Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015282Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015283Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015286Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015288Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015289Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015292Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015296Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015298Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015299Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015300Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015303Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015304Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015307Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015308Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015321Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015322Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015323Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015342Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015343Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015344Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015351Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017404Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017407Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017415Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017417Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017420Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017424Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017427Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017430Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017433Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017436Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017442Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017443Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017680Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017683Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017684Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017685Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017686Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017689Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068871_10199242123300006358Miscanthus RhizosphereMSNGDVFDGDAMVFAEVPKVMASKCSSEVGDDAVRETKSVDDVFEELDCFLCSSRDERFILD
Ga0105246_1142485113300011119Miscanthus RhizosphereMGNGDVFDRDASVFVEIPKMMTSECGFEVGDSAVRETESVDDIFEELDCFLCS
Ga0157374_1182777613300013296Miscanthus RhizosphereMGNRDVFDRDASVFAEVPKMMTSECSSEVSDNAIRETESVD
Ga0157374_1249893523300013296Miscanthus RhizosphereMGNRDVFDGDASIFAEVPKMMACEYSSKVGDNAVQETESV
Ga0157378_1167792213300013297Miscanthus RhizosphereMSNGDVFDGDGTVFAEVPKVMASKCSFEVGDDAVRETKSVDDIFEELDCF
Ga0157378_1324008413300013297Miscanthus RhizosphereMGNRDVFDRDASVFADIPKMMTSEYSSEIGDNAIRETESMNDIYEE
Ga0182113_106144113300015269Miscanthus PhyllosphereMGNRDVFNGDASVFAEVPKMVTGECSSEVGDNAVRETKS
Ga0182188_105207013300015274Miscanthus PhyllosphereMGNGDIFDGDASIFVEVPKVMASKRSFEVGDDAVWETESVDDIFEELDCFLCSSRDEW
Ga0182188_105788313300015274Miscanthus PhyllosphereMGNRNIFDGDASFFAEVPKMVTSECSFEVSDNAVRETESMDDIFKELD
Ga0182172_103637213300015275Miscanthus PhyllosphereMGNRDVFDGDASVFVEVPKMVTHECSSEVDDNAIWETESMDDIFEE
Ga0182172_105808313300015275Miscanthus PhyllosphereMGNRDVFDGDASVFVEVSKMMTGECSSEVGDNTVRETESVDGIFE*
Ga0182172_107181913300015275Miscanthus PhyllosphereMSFDLAVGSRMGNGDVFDRDAPVFTEVPKVMASKRSSKVGDDTVQETESVENIFEELNCSLCGSRDKR
Ga0182170_104149223300015276Miscanthus PhyllosphereMGNGDIFDEDASVFIEVLKMMTSECGSEVGDNAVWETESMDDIFEELDCFLCSG*
Ga0182170_105194513300015276Miscanthus PhyllosphereMGNRDVFDGDASVFAEVPKMVASECSSEVGDNAVRETKSVDDIF
Ga0182128_102226513300015277Miscanthus PhyllosphereMGNRDVFDRDASVFTENPKMVASECSSEVGDNAIWETESMDDIFEELD
Ga0182128_104300623300015277Miscanthus PhyllosphereMGNGDVLDGDASVFVEVPKVMASKCSSEVGDDAVWETESVDDVFEKLYRLLCSSRNEWFILNPLG*
Ga0182128_104839423300015277Miscanthus PhyllosphereMSNGDVFDGDAMIFVEVPKVMTSKYSSEVDDDAVWVTESVD
Ga0182128_107000523300015277Miscanthus PhyllosphereMGNGDIFDGDATVFAEVPEVMASKCSFEVGDDAVRETKSMDDVLEELDCFIYSS*
Ga0182124_101960723300015282Miscanthus PhyllosphereMSNKDVFDGDAMVFAEVPKVMASKCSAEVGDDAVRETESMDDVFEELGCFLCSSRDERFILNP
Ga0182124_104511623300015282Miscanthus PhyllosphereMGNGDVFDGDASVFAEVLNMMTSKCSSKVSDDAVR
Ga0182156_108761413300015283Miscanthus PhyllosphereVFDGDATVFAEVPKVMASKCSSEVGDDAVRETESVYDIFKELDCFSLQ*
Ga0182176_107900013300015286Miscanthus PhyllosphereSRMGNGDIFDGDASVFVEVPKMMASKHSSEVGDNAVRETESIDDIFKELDCLL*
Ga0182173_105843413300015288Miscanthus PhyllosphereMGKRDVFDGDALVFIEVPKMVASECSSKVGDNAVWETESVGDIFEKLNCLLCSGRNKRLL
Ga0182173_106641623300015288Miscanthus PhyllosphereMGNRDVFDRGASVFIEVPKMVTSECSSEVGDNAVRETKSMDD
Ga0182138_102781713300015289Miscanthus PhyllosphereMGNGDIFDRDAMVFTEVPEVMASKCSSEVGDDAVRETKSVDDIFEELDCFLCSSQDERFILDLF*
Ga0182141_105457413300015292Miscanthus PhyllosphereMGNRDVFDGDASVFAKVPKMVASECSPEVGDNAVLETKS
Ga0182157_101956923300015296Miscanthus PhyllosphereMGNGDVFDGDASIFAEVLKMMASKCSSEVGDNAIWETESVDIFEELDCLLSSS*
Ga0182106_103603113300015298Miscanthus PhyllosphereMGNRHVFDGDASVFIEVPKMVTSECSSEVGDNAVRETKSMDDIFKELDCL
Ga0182107_102338213300015299Miscanthus PhyllosphereMGNGDVIDGDTTVFAEIPKVMASECSSEVDDDAVWETKSVDDIFKELDCFLYSS*
Ga0182108_110554313300015300Miscanthus PhyllosphereGSRMGNRDIFHGDTPVFIEVPKVMASKCSSEVGDDAVRETESMDDVFEELDLFLCSS*
Ga0182123_104231823300015303Miscanthus PhyllosphereMGNRDIFDGDASVFAEVPKMMTSECSSEVSDNVVWETESMDDTFEELDCLLCSG
Ga0182123_105102723300015303Miscanthus PhyllosphereMGNEDVFDGDASVFVEVPKMVTSEISSEVSDNVVRKTKS
Ga0182123_109219513300015303Miscanthus PhyllosphereMGNRDVFDRDASIFVEVPKIMTSECSFEVGDNAVRETESV
Ga0182112_107485013300015304Miscanthus PhyllosphereDLAIVSRMGNRDVFDGDALVFAEVPKMMTSECSSEVSDNAIRETEFVDDNFKELDCLLGSG*
Ga0182144_107257433300015307Miscanthus PhyllosphereMGNRDVFDGDASVFVEVPKMVTSECSSEVSDNAVRETESMDDIFKEL
Ga0182142_104634523300015308Miscanthus PhyllosphereMGNRDVFDGDASVFTEFPKMMTSKCSSEVGDNAIREIESMDDIFEELDCLLCSG*
Ga0182142_109654623300015308Miscanthus PhyllosphereMGNRDVFDGDASVFAEVPKLMTSKCSSEIGDNAVQETESVDDIFE*
Ga0182127_102417613300015321Miscanthus PhyllosphereMGNGDIFDGDGMVFAEVLEVMASKCSFEVGDDAVWETKSVDDIFEELDCFLYSS*
Ga0182127_105625013300015321Miscanthus PhyllosphereMSNRDVFDEDASIFVEVPKMVTSECSSKVGDNAVRETVSMDDIFEGLD
Ga0182127_107561313300015321Miscanthus PhyllosphereMGNGDVFDGDASVFVEVPKMMTSECSFEVGDNAVRDTESVDDIFEELECLF
Ga0182110_103162313300015322Miscanthus PhyllosphereMSNGDVFDGDATVFAEVPKVMASKCSFVVGDDAVRETKSMDDVFEELDCFLCSSRDERFI
Ga0182110_107809413300015322Miscanthus PhyllosphereMGNRDIFDRDASVFVEVPKMMTSECSSEVGDNVVRETESMDDIFEELDCLLCSS*
Ga0182110_111072923300015322Miscanthus PhyllosphereMSNRDVFDGDASVFVEVPKMMTNECSSEVGDNAIRETKSMDNIFEELDCLLSSSQNKRF
Ga0182110_111871923300015322Miscanthus PhyllosphereMGNGEIFDGDASVFAEVLEMMASKCSSKVGDNAVWETESVYDIFEELDCFLCSG*
Ga0182129_107518813300015323Miscanthus PhyllosphereMDNGDVFDGDASVFIEVPKMMTSECSSEVGDNAVLETKSV
Ga0182129_110899113300015323Miscanthus PhyllosphereMVKREVFDGDASVFTEVPKMVTNEYSFEVGDNAVRETKSMDDIFEELDCLLCSG*
Ga0182187_114887713300015341Miscanthus PhyllosphereMGNGDIFDGDATVFTEVLEVMDSKCTFEVGDDAVQETKSVDNIFE*
Ga0182109_116511423300015342Miscanthus PhyllosphereMGNGDVFDGDASVFVEVPKMMTSKCISEVGDNAVWETESVDDIFE*
Ga0182155_118484013300015343Miscanthus PhyllosphereMGNRDVFARDASVFIEVPKMMTSECSSEVGDNVVR
Ga0182155_120679113300015343Miscanthus PhyllosphereMGNRDVFDGDASVFAEVPKMVTSECSSEVSDNAVRETDSVDDIFKELVCLLSSS*
Ga0182189_110499713300015344Miscanthus PhyllosphereMGNRDIFDGDATVFVEVPKMVTSEYSSKVGDNAIRETESMDDIFEELDCL
Ga0182189_110790513300015344Miscanthus PhyllosphereMGNGDVFNRDAPVFVEVPKVMASKRSFEVGDDAVREAESVYDIFKELDC
Ga0182189_120687723300015344Miscanthus PhyllosphereMGNRDVFDGDASVFTEAPKMVTSECSSEVGDNAIR
Ga0182111_107262823300015345Miscanthus PhyllosphereMSNGDIFDRDVTIFAEVPEVMASKCSSEVGDDAVRETES
Ga0182111_120047623300015345Miscanthus PhyllosphereGSRMGNRDVFDRDALVFVEVSKMMTSKCSFEVGDNAIWETKSMDDIFE*
Ga0182139_120129913300015346Miscanthus PhyllosphereMDNRDVFDRDASVFVEVPKIVTSERSFEVGDNAVRETKSMDDIFEELDC
Ga0182177_122003123300015347Miscanthus PhyllosphereMGNRDVFDGDASVFIEVPKMMTSECSSEVYDNAVRETKSMDDIF*
Ga0182161_108678613300015351Miscanthus PhyllosphereMGNRDVFDRDASIFVEVPKMVPSECSSEVGDNAVWETKSM
Ga0182161_125156133300015351Miscanthus PhyllosphereMSNGDIFDGDATVFAEVPKVMASKCSFEVGDDAIRETESMDDVFEELDCFLCSS*
Ga0182159_120595013300015355Miscanthus PhyllosphereMGNRDIFDGDASVFVEVPKMMASKCSSEFGDNAVRETKSMDDIFKELDCFLCSG
Ga0182145_108350323300015361Miscanthus PhyllosphereMGNGDIFDGDASIFTEVPKMMTSECGSEIGDNAVQETEYVDDI
Ga0182145_113650323300015361Miscanthus PhyllosphereMGNREVFDRDASIFAEGPKMVTSECSFEVGDNAIRETESMDDIFEEL
Ga0182145_114868923300015361Miscanthus PhyllosphereEDIFDRDASVFVEVSKMMTSKCSSEVSDNAVQETESVDDIFEELDCLFCNS*
Ga0182203_112062113300017404Miscanthus PhyllosphereMGNRDVFDGDAWVFVEVPKMVTSECSSEVGDNAIRETESMDDIFEE
Ga0182220_108588223300017407Miscanthus PhyllosphereMGNGDVFEGDALVFAEVPKMMTSECSSEIGDNAVWETESMDDIFEELDCFLCSS
Ga0182207_111468013300017410Miscanthus PhyllosphereVFDGDASVFAELPKMMTSKCSSKVGDNVVRETESMDDIFEELDCLLCSS
Ga0182208_103451923300017411Miscanthus PhyllosphereMGNRDVFDEDASVFTEVPKMMTSECSFEVGDNAVRETESMDDIFEEL
Ga0182208_104146323300017411Miscanthus PhyllosphereMGNRDVFDGDASVLAEVPKVMASKRSAKVRDNAVRETESVDDIFEELDCFLCSSR
Ga0182208_106278413300017411Miscanthus PhyllosphereMGNGDVFDEDASVFVEVPKMMTSECGSEVGDNAVRETESVDDILKEPDCFLCSSRDKRFVLDPL
Ga0182208_108036313300017411Miscanthus PhyllosphereMSNGDVFDGDAMVFAEVPKVMASKCSSEVSDDVVRETKSVDDIFEELD
Ga0182222_101112813300017413Miscanthus PhyllosphereMGNEDVFDEDTTVFAEIPKVMASECSSEVGDNAIRETESMDDIFEELDYLL
Ga0182222_103648323300017413Miscanthus PhyllosphereMGNGDIFEGDATVFAEVLEVMASKCSSKVGDDAVWEIKSMDDVFEELDYLLCSG
Ga0182222_104189623300017413Miscanthus PhyllosphereMGNRDVFDGDASVFVEVPKMMASKYSSKVGDNAIQETESVNDIFKELD
Ga0182222_109820523300017413Miscanthus PhyllosphereMGNGDVFDGDASVFAEVSKMVPSECSSEVGDNAIRETESMDDIF
Ga0182202_103003523300017415Miscanthus PhyllosphereMDNRDVIDGDASVFAEVLKMVTSECSSEVSDNAVRETESMDDIFEELACLLCSR
Ga0182202_112204023300017415Miscanthus PhyllosphereMGNRDVFDGDASVFIEVPKMMTSESSSKVGDNAVRKTESVDNIFKEL
Ga0182230_108942323300017417Miscanthus PhyllosphereMGNRDVFDEDASVFVEVPKMVTSECSSEVGDNAVRETESMDDIFKELDCLLYSG
Ga0182228_108893813300017420Miscanthus PhyllosphereMGNGDILDGDATVFVEVPKVMASKCSSEVDDDAVRETESVDDVLEELDCFLCSS
Ga0182228_111036513300017420Miscanthus PhyllosphereMSKGHVFDGDAMVFVEVPKVMVSKCSSKVGDDAVRETE
Ga0182219_105462523300017424Miscanthus PhyllosphereMGNGDVLHGDASVFVEVLKVMANKRSSKVGDDAVWETESVDDVFEELDCFLCSSR
Ga0182219_111467923300017424Miscanthus PhyllosphereMGNRDVFDRDASVFVEVPKMVTSECSFKVGDNAVRETESMDDIFEELDCLLCSSGN
Ga0182219_112436413300017424Miscanthus PhyllosphereMGNGDVFDGDATVFTEVPEVMASKCSSKVGDDAVWETESMDDVFEELDCFLCS
Ga0182219_114058223300017424Miscanthus PhyllosphereMVNRDVLEGDASVFVEVPKVMASKRSSKVGDDVVRETESVDDIFEELDYFLCSS
Ga0182224_103605113300017425Miscanthus PhyllosphereMGNRDVFDEDASVFAEVPKIMASECSSEVGDNAIRETESMDDI
Ga0182224_111789513300017425Miscanthus PhyllosphereASVFIEVPKMMTSECSFEVSDNAVQETKSVDDIFKELDCLLSSS
Ga0182224_113040423300017425Miscanthus PhyllosphereMETFNGDASVFTEVLKMMTSECSSEVGDNAVWETESVDDIFKELD
Ga0182190_104569923300017427Miscanthus PhyllosphereMGNEDVFDGDASVFADVSKMMTSKCSSEVSDNVVRETKSMDDVFEELDRFLCSG
Ga0182190_105296523300017427Miscanthus PhyllosphereMGNGDIIDRDTMVFIEIPKVMASECSSEVGDDAVRETKSMDDVFEELDCFLCSSGDERFILNP
Ga0182190_108954123300017427Miscanthus PhyllosphereMGNRDVFDGDASVFIEVPKMVTSECGSEVSDNVVRDTESMDDIFEEFDCLLCS
Ga0182190_111528123300017427Miscanthus PhyllosphereMGNRDVFDGDASVFTEVQKMMASECSFDVGDNAIRETESVDDIFEEL
Ga0182190_114311313300017427Miscanthus PhyllosphereMGNRDVFDRDASVFVEVPKMVTSECSSEVGDNAIRATESMDDIFEELDCLLCSSQNKRLV
Ga0182190_114783523300017427Miscanthus PhyllosphereMGNEDVFDGDASVFAEIPKMMTSECSSEVSDNAVRETESVDDIFEELD
Ga0182192_111556623300017430Miscanthus PhyllosphereMSNGNVFDEDATVFAEVPKVMASKCSFEVSDDAVQETESMYDVFEELDC
Ga0182192_113788513300017430Miscanthus PhyllosphereMGNRDIFNGDASVFVEVRKMMTSEYGFEVSDNAVQETESVDDIFEE
Ga0182206_112576013300017433Miscanthus PhyllosphereMSNGDVFDRDATVFTEVPEVMASKCSSEVGDDAIRETKSVDDIFEELDYFL
Ga0182206_112848823300017433Miscanthus PhyllosphereMGNGDIFDEDATIFAEVPKVMASERSSEVGDDVVRETESVDDIFEELDCFLWVAE
Ga0182209_112392113300017436Miscanthus PhyllosphereMGNKDVFDGDASVFTQVPKMMTSECSFEVGDNAIRETESMNDI
Ga0182191_101072913300017438Miscanthus PhyllosphereMGNRDVFDGDASVFIEVPKVMTSKCSSEVGDDAVRETESMNDVFEELDCFLCSSRD
Ga0182191_106934423300017438Miscanthus PhyllosphereMGNRDVFDGDASVFAEVPKMVPSECSSEVGDNAVRETESMDDIFEEL
Ga0182191_107008923300017438Miscanthus PhyllosphereMGNRDAFDEDASIFVEVPKMVTSECSSEVGDNAVRETESMDYIFEELNCLLCSSQNQR
Ga0182191_112884023300017438Miscanthus PhyllosphereMSNGDVFDGDAPVFVEVPKVRASKRSSEVGDNAVRETEYEDDIFEELDCFLCSSRDERF
Ga0182221_103709213300017442Miscanthus PhyllosphereMGNRDVFDGNASVFAEVLEMMPSECSSEVGDNAIWETESMDNIFE
Ga0182221_104874713300017442Miscanthus PhyllosphereMGNGDIFDRDAMVFAEVPEVMASKCSSEVGDDAVRETESVDDIFEELDCFLCSR
Ga0182221_105454313300017442Miscanthus PhyllosphereMGNGDALDGDASVFAEVPKVMASKCSFEVGDDAVRETESVDDVFEELD
Ga0182193_108108513300017443Miscanthus PhyllosphereMGNRDVFDGDASIFIEVPKMVTSECSSKVGDNAVRETESVEHI
Ga0182193_111466923300017443Miscanthus PhyllosphereMGNGDVFDGDTTVFAEIPKVMESECSSEVGDDAVRETKSMDDVFEELDCFLCSSGDERFI
Ga0182233_108049613300017680Miscanthus PhyllosphereMSNGDIFDGDATVFAEVPEVMASKCSSEVGDDAVWETKSVDDIFEELDCFL
Ga0182218_107135813300017683Miscanthus PhyllosphereMGNRDVFDGDASVFADVPKMVTSECSSEVGDDAVWETESMDDIFEELDCFLCSGLNK
Ga0182218_111433413300017683Miscanthus PhyllosphereMGNGDVFDGDASVFIEVPKIMTSECSSEVGDNVVWETEY
Ga0182218_112028323300017683Miscanthus PhyllosphereMGNRDIFNEDALAFVEVLEMMTSECGSEVGDDVVREIESVDDIFEELDYFLCSG
Ga0182225_108855013300017684Miscanthus PhyllosphereMGNRDVFDGDASIFIEVPKIMTSKCSSKVGDNAVRENEFV
Ga0182225_110427013300017684Miscanthus PhyllosphereMGNRDVFDRDASVFVEAPKMMTSECSSEIGDNAVWETESMDDIFEELDCLLCSG
Ga0182225_113833723300017684Miscanthus PhyllosphereMSNGDIFDGDATVFAEVPKLMASKCSSEVSDDAIWETKSMDDVFEELDCFLCNS
Ga0182227_109502013300017685Miscanthus PhyllosphereMGNLDIFDRDAPVFAEVPKMMAGKRSSKVGDDAVRETESVNGIFEELDCFLCSSRDERFILDPL
Ga0182205_105854223300017686Miscanthus PhyllosphereDASVFVEISKMVTSECSSQVGDNAVRETESMDDVFEELDCLLCSS
Ga0182205_108708923300017686Miscanthus PhyllosphereMGNRDVFDGDAWVFVEVPKMVPSECSSEVGDNAIRETESMDDIFEELDCLLCSS
Ga0182205_111382713300017686Miscanthus PhyllosphereMGNGDIFDGDATVFAEVLEVMASKCSSEVGDDAVWETKSVDDIFEELDCF
Ga0182205_113009323300017686Miscanthus PhyllosphereMGNRDVFDGDASVFIEVPKIMTSACGSEVGDNAVRETEYVDDIFKELDCLLYSS
Ga0182205_113800513300017686Miscanthus PhyllosphereMLFDLPIGSRMSNKDVFDGDAMVFAEVPKVMASKCSSKVGDDAVWETESVDDIFEEL
Ga0182205_117226723300017686Miscanthus PhyllosphereVGNGDVFDRDAPIFTEITKVMASKHSSEVGDDAVRETESVDDIFEELDCF
Ga0182231_105714223300017689Miscanthus PhyllosphereMGNRDVFDGDASVFAEVLEMMASKCSSKVGDNAVWETESVYD
Ga0182231_108301523300017689Miscanthus PhyllosphereMGNGDVFDRDASVFTEVPKMVTSECSSEVGDNAVRETKSMDDIFEELDYLLCSG
Ga0207687_1180994513300025927Miscanthus RhizosphereMGNGDVFDGDASVFVEVPKMMASKCSSEVGDNAVREAESVDDIFEEL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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