NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070176

Metagenome / Metatranscriptome Family F070176

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070176
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 45 residues
Representative Sequence TFALIARVESNAWVAAAFGIIPLCVGLGFFLDSALIRRDLHA
Number of Associated Samples 115
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.44 %
% of genes near scaffold ends (potentially truncated) 95.93 %
% of genes from short scaffolds (< 2000 bps) 89.43 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (82.927 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(11.382 % of family members)
Environment Ontology (ENVO) Unclassified
(24.390 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.341 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 52.86%    β-sheet: 0.00%    Coil/Unstructured: 47.14%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF01878EVE 15.45
PF00753Lactamase_B 7.32
PF13155Toprim_2 1.63
PF08275Toprim_N 1.63
PF01850PIN 1.63
PF00144Beta-lactamase 1.63
PF01202SKI 1.63
PF10543ORF6N 0.81
PF13091PLDc_2 0.81
PF14690zf-ISL3 0.81
PF13561adh_short_C2 0.81
PF13349DUF4097 0.81
PF00440TetR_N 0.81
PF02922CBM_48 0.81
PF07681DoxX 0.81
PF07321YscO 0.81
PF10647Gmad1 0.81
PF13490zf-HC2 0.81
PF07715Plug 0.81
PF13360PQQ_2 0.81
PF02091tRNA-synt_2e 0.81
PF01431Peptidase_M13 0.81
PF01361Tautomerase 0.81
PF11453DUF2950 0.81
PF01807zf-CHC2 0.81
PF00166Cpn10 0.81
PF00905Transpeptidase 0.81
PF09594GT87 0.81
PF04116FA_hydroxylase 0.81
PF07690MFS_1 0.81
PF02719Polysacc_synt_2 0.81
PF13442Cytochrome_CBB3 0.81
PF02894GFO_IDH_MocA_C 0.81
PF01797Y1_Tnp 0.81
PF14224DUF4331 0.81
PF07366SnoaL 0.81
PF06155GBBH-like_N 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1673Predicted RNA-binding protein, contains PUA-like EVE domainGeneral function prediction only [R] 15.45
COG2947Predicted RNA-binding protein, contains EVE domainGeneral function prediction only [R] 15.45
COG0358DNA primase (bacterial type)Replication, recombination and repair [L] 2.44
COG0451Nucleoside-diphosphate-sugar epimeraseCell wall/membrane/envelope biogenesis [M] 1.63
COG0702Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domainsGeneral function prediction only [R] 1.63
COG1086NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsCCell wall/membrane/envelope biogenesis [M] 1.63
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 1.63
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 1.63
COG2367Beta-lactamase class ADefense mechanisms [V] 1.63
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.81
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 0.81
COG0752Glycyl-tRNA synthetase, alpha subunitTranslation, ribosomal structure and biogenesis [J] 0.81
COG1087UDP-glucose 4-epimeraseCell wall/membrane/envelope biogenesis [M] 0.81
COG1088dTDP-D-glucose 4,6-dehydrataseCell wall/membrane/envelope biogenesis [M] 0.81
COG1089GDP-D-mannose dehydrataseCell wall/membrane/envelope biogenesis [M] 0.81
COG1091dTDP-4-dehydrorhamnose reductaseCell wall/membrane/envelope biogenesis [M] 0.81
COG1942Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase familySecondary metabolites biosynthesis, transport and catabolism [Q] 0.81
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.81
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 0.81
COG3000Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilyLipid transport and metabolism [I] 0.81
COG3536Uncharacterized conserved protein, DUF971 familyFunction unknown [S] 0.81
COG3590Predicted metalloendopeptidasePosttranslational modification, protein turnover, chaperones [O] 0.81
COG4270Uncharacterized membrane proteinFunction unknown [S] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms82.93 %
UnclassifiedrootN/A17.07 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_105175755All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium968Open in IMG/M
3300001593|JGI12635J15846_10343111All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae918Open in IMG/M
3300005177|Ga0066690_10677748All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae685Open in IMG/M
3300005180|Ga0066685_10989036All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300005184|Ga0066671_10243081All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1105Open in IMG/M
3300005335|Ga0070666_10083043All Organisms → cellular organisms → Bacteria2191Open in IMG/M
3300005336|Ga0070680_100932508All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae749Open in IMG/M
3300005338|Ga0068868_102004052All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae549Open in IMG/M
3300005338|Ga0068868_102034827All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae545Open in IMG/M
3300005454|Ga0066687_10445640All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae757Open in IMG/M
3300005459|Ga0068867_100267983All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1395Open in IMG/M
3300005533|Ga0070734_10168309All Organisms → cellular organisms → Bacteria1268Open in IMG/M
3300005534|Ga0070735_10915626All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005541|Ga0070733_10491502All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300005548|Ga0070665_101911140All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300005554|Ga0066661_10943234All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola505Open in IMG/M
3300005564|Ga0070664_102168466All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300005591|Ga0070761_10769504All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae605Open in IMG/M
3300005617|Ga0068859_103024662All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae513Open in IMG/M
3300005764|Ga0066903_105676138Not Available656Open in IMG/M
3300005841|Ga0068863_102351833All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae542Open in IMG/M
3300005993|Ga0080027_10287365All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae653Open in IMG/M
3300005994|Ga0066789_10334654All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300006059|Ga0075017_101467596All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae537Open in IMG/M
3300006358|Ga0068871_101228217All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300006358|Ga0068871_102251215All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae519Open in IMG/M
3300006358|Ga0068871_102348449All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae508Open in IMG/M
3300006903|Ga0075426_10005851All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui8760Open in IMG/M
3300009148|Ga0105243_11540487Not Available690Open in IMG/M
3300009177|Ga0105248_12773457Not Available559Open in IMG/M
3300009519|Ga0116108_1149916All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300009545|Ga0105237_10034908All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5090Open in IMG/M
3300009623|Ga0116133_1020004All Organisms → cellular organisms → Bacteria1657Open in IMG/M
3300009636|Ga0116112_1076159All Organisms → cellular organisms → Bacteria → Acidobacteria959Open in IMG/M
3300009665|Ga0116135_1327108All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300009700|Ga0116217_10529346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium739Open in IMG/M
3300009759|Ga0116101_1170322All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300009824|Ga0116219_10036029All Organisms → cellular organisms → Bacteria → Acidobacteria2967Open in IMG/M
3300009839|Ga0116223_10894514All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300010373|Ga0134128_10940612All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300010376|Ga0126381_103551707Not Available612Open in IMG/M
3300010379|Ga0136449_102232795Not Available797Open in IMG/M
3300010401|Ga0134121_10228866All Organisms → cellular organisms → Bacteria1618Open in IMG/M
3300011120|Ga0150983_13020001All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300011271|Ga0137393_11406502All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300012189|Ga0137388_10502371All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300012202|Ga0137363_11074098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium684Open in IMG/M
3300012202|Ga0137363_11516909All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300012349|Ga0137387_10433233Not Available954Open in IMG/M
3300012582|Ga0137358_10146525All Organisms → cellular organisms → Bacteria1607Open in IMG/M
3300012683|Ga0137398_11178657All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300012927|Ga0137416_10721531All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300012971|Ga0126369_12436099Not Available609Open in IMG/M
3300013102|Ga0157371_11062035All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300014162|Ga0181538_10603197All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300014169|Ga0181531_10297197Not Available988Open in IMG/M
3300014657|Ga0181522_10031250All Organisms → cellular organisms → Bacteria2941Open in IMG/M
3300014969|Ga0157376_11371154Not Available738Open in IMG/M
3300015371|Ga0132258_10953036All Organisms → cellular organisms → Bacteria2168Open in IMG/M
3300015372|Ga0132256_100329161All Organisms → cellular organisms → Bacteria → Acidobacteria1618Open in IMG/M
3300015373|Ga0132257_103248770All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300015374|Ga0132255_102797100All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300016270|Ga0182036_10033890All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 833071Open in IMG/M
3300016319|Ga0182033_12144086All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300016387|Ga0182040_11225907All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300016702|Ga0181511_1024142All Organisms → cellular organisms → Bacteria4945Open in IMG/M
3300017928|Ga0187806_1376416All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300017933|Ga0187801_10223584All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300017934|Ga0187803_10136395All Organisms → cellular organisms → Bacteria → Acidobacteria964Open in IMG/M
3300017946|Ga0187879_10163349All Organisms → cellular organisms → Bacteria1256Open in IMG/M
3300017955|Ga0187817_10267325All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300017961|Ga0187778_10625304Not Available723Open in IMG/M
3300018018|Ga0187886_1190791All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300018024|Ga0187881_10134356All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300018035|Ga0187875_10664160All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300018042|Ga0187871_10861065All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300018043|Ga0187887_10116876All Organisms → cellular organisms → Bacteria1602Open in IMG/M
3300018086|Ga0187769_10061301All Organisms → cellular organisms → Bacteria2635Open in IMG/M
3300018089|Ga0187774_10315135All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300020580|Ga0210403_10086469All Organisms → cellular organisms → Bacteria2532Open in IMG/M
3300020580|Ga0210403_11355531Not Available541Open in IMG/M
3300021170|Ga0210400_10726383Not Available816Open in IMG/M
3300021170|Ga0210400_11020195Not Available672Open in IMG/M
3300021181|Ga0210388_10971436Not Available729Open in IMG/M
3300021405|Ga0210387_10747669Not Available865Open in IMG/M
3300021433|Ga0210391_10365457Not Available1132Open in IMG/M
3300021433|Ga0210391_11257142All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300021475|Ga0210392_11436799All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300021479|Ga0210410_10959687Not Available743Open in IMG/M
3300022717|Ga0242661_1121479All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae564Open in IMG/M
3300024271|Ga0224564_1107267All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300025917|Ga0207660_11281207Not Available595Open in IMG/M
3300025938|Ga0207704_10031795All Organisms → cellular organisms → Bacteria2978Open in IMG/M
3300026142|Ga0207698_10424016All Organisms → cellular organisms → Bacteria1277Open in IMG/M
3300026294|Ga0209839_10281960All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300026328|Ga0209802_1084942All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300026329|Ga0209375_1277008All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300026343|Ga0209159_1111455All Organisms → cellular organisms → Bacteria → Acidobacteria1172Open in IMG/M
3300026538|Ga0209056_10411033All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300026999|Ga0207949_1010228All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium848Open in IMG/M
3300027521|Ga0209524_1031519Not Available1109Open in IMG/M
3300027826|Ga0209060_10372792All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300027846|Ga0209180_10590588All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300027853|Ga0209274_10103413All Organisms → cellular organisms → Bacteria1407Open in IMG/M
3300027879|Ga0209169_10129101All Organisms → cellular organisms → Bacteria1313Open in IMG/M
3300027905|Ga0209415_10302691All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1377Open in IMG/M
3300028037|Ga0265349_1029970All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300028800|Ga0265338_10420896All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300029951|Ga0311371_12498170All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300029990|Ga0311336_10546510All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300030007|Ga0311338_12053163All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300030878|Ga0265770_1081502All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae633Open in IMG/M
3300031231|Ga0170824_118792201All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300031708|Ga0310686_112231966All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1845Open in IMG/M
3300031821|Ga0318567_10354184All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300031821|Ga0318567_10774105All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300031938|Ga0308175_103084011All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300031954|Ga0306926_10027914All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6586Open in IMG/M
3300032066|Ga0318514_10801525All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300032074|Ga0308173_10532745All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300032160|Ga0311301_11149647Not Available1002Open in IMG/M
3300032205|Ga0307472_101108792Not Available749Open in IMG/M
3300032892|Ga0335081_10040693All Organisms → cellular organisms → Bacteria → Acidobacteria7383Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.13%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.32%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland5.69%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.88%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland4.06%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.25%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.25%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.25%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.44%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.44%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.44%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.44%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere2.44%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.63%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.63%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.63%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.81%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.81%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009636Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016702Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300018018Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026999Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)EnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028037Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030878Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10517575523300000955SoilYMVTFSLISRIESDAWIATAFGIIPFALGAGFLLDSYLIRRDAHGS*
JGI12635J15846_1034311133300001593Forest SoilMITFALIGRVESDAWVAAAFGIIPLSVGLGFFVDYALIRRDLHA*
Ga0066690_1067774823300005177SoilYISTFALIARVEHEAWMAAAFGIIPLAVGIGFFLDSALIRRDLRAS*
Ga0066685_1098903613300005180SoilTAGAIGYMATFALIARVEPDAWMAAAFGIIPLALGLGFFVDSALIRKDLHA*
Ga0066671_1024308123300005184SoilYMATFALIARVEPDAWMAAAFGIIPLALGLGFFVDSALIRKDLHA*
Ga0070666_1008304313300005335Switchgrass RhizosphereTFSMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS*
Ga0070680_10093250823300005336Corn RhizosphereLLVTGALGYIATFSMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAT*
Ga0068868_10200405223300005338Miscanthus RhizosphereFSMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS*
Ga0068868_10203482723300005338Miscanthus RhizosphereMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS*
Ga0066687_1044564013300005454SoilTFGLIARVESDAWVAAAFGIIPLAVGLGFFLDWALIRRDSRA*
Ga0068867_10026798333300005459Miscanthus RhizosphereIARVESDAWTAAAFGIIPLAVGLGFFVDAYLIRRDLRAS*
Ga0070734_1016830913300005533Surface SoilFALIARVEPDAWIAGAFGIIPLSVGVGFFLDSAMVRRDVKSS*
Ga0070735_1091562623300005534Surface SoilIARAESDAWIAAAFGIIPLSVGIGFFVDSMLIRRDLHA*
Ga0070733_1049150223300005541Surface SoilTFALIARTDSDAWVAAAFGIIPLCVGVGFFVDATLVRRDARA*
Ga0070665_10191114013300005548Switchgrass RhizosphereYMATFGLIARVESDAWTAAAFGIIPLAVGLGFFVDAYLIRRDLRAS*
Ga0066661_1094323413300005554SoilFALIARVEPDAWMAAAFGIIPLALGLGFFVDSALIRKDLHA*
Ga0070664_10216846623300005564Corn RhizosphereFGLIARVESDAWTAAAFGIIPLAVGLGFFVDAYLIRRDLRAS*
Ga0070761_1076950423300005591SoilLGYMLTFALIARADSDAWLAAAFGIIPLSVGLGFFVDAALIRRDQHA*
Ga0068859_10302466213300005617Switchgrass RhizosphereRVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS*
Ga0066903_10567613813300005764Tropical Forest SoilTFALIARVEPDAWVAASLGAIPFTLGLGFFLDSILVRRDLRTS*
Ga0068863_10235183323300005841Switchgrass RhizosphereVTGALGYIATFSMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAT*
Ga0080027_1028736523300005993Prmafrost SoilAVGYIVAFGLVARFTEPEAWTAAAFGVIPLAVGMGFLLDWTLIRRDLRVSS*
Ga0066789_1033465423300005994SoilGILLVTGAIGYIGAFGLVARLTEPEAWTAAAFGVIPLAVGMGFLLDWTLIRRDLRTSS*
Ga0075017_10146759623300006059WatershedsIGCCALIGRVEPDAWTAAAFGVIPLAVGLGFFVDFALIRRDVRAS*
Ga0068871_10122821733300006358Miscanthus RhizosphereALIARVESDAWTAAAFGIIPLAVGLGFFVDAYLIRRDLRAS*
Ga0068871_10225121523300006358Miscanthus RhizosphereIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS*
Ga0068871_10234844923300006358Miscanthus RhizosphereVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS*
Ga0075426_1000585113300006903Populus RhizosphereALGYIGTFTLIARVEQDAWMAAAFGIIPLAIGVGFFVDSALIRRDLHAS*
Ga0105243_1154048713300009148Miscanthus RhizosphereTFGLIARVESDAWTAAAFGIIPLAGGLGFVVDAYLIRRDLRAS*
Ga0105248_1277345713300009177Switchgrass RhizosphereATFSMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS*
Ga0116108_114991623300009519PeatlandIGYMIAFALIARAEPDAWTAAAFGVIPLAVGIGFFLDSTLIRRDARA*
Ga0105237_1003490813300009545Corn RhizosphereGLIARVESDAWTAAAFGIIPLAVGLGFFVDAYLIRRDLRAS*
Ga0116133_102000423300009623PeatlandGILLTSVAVGYIIAFALIARSEPDAWMASAFGVIPLAVGVGFFLDSTLIRRDARA*
Ga0116112_107615923300009636PeatlandGYMLTFGLIARVEPDAWVATSFRAIPLAVGVGYFIDALLIRRDLRASS*
Ga0116135_132710823300009665PeatlandMITFALIARVESDAWTAAAFGIIPLSIGIGFFVDSALIRRDLHA*
Ga0116217_1052934623300009700Peatlands SoilLVTGALGYMLTFALIARVESDAWIAAAFGIIPLSVGLGFFVDSALIRHDLHA*
Ga0116101_117032223300009759PeatlandGYMITFALIGRVESDAWTAAAFGIIPLSIGIGFFVDWALIRRDLHA*
Ga0116219_1003602943300009824Peatlands SoilRVESDAWMAAAFGIIPLSVGIGFFVDSALIRRDLHA*
Ga0116223_1089451423300009839Peatlands SoilGYMLTFALIARVESDAWIAAAFGIIPLSVGLGFFVDSALIRHDLHA*
Ga0134128_1094061223300010373Terrestrial SoilYIATFGLIARVESDAWTAAAFGIIPLAVGLGFFVDAYLIRRDLRAS*
Ga0126381_10355170713300010376Tropical Forest SoilLGYTIAFGLIGRVEHDAWVAAALGLIPFAIGLGCFLDSALVRRDLRAS*
Ga0136449_10223279523300010379Peatlands SoilMLTFALIARVESDAWMAAAFGIIPLSVGIGFFVDSALIRRDLHA*
Ga0134121_1022886633300010401Terrestrial SoilLGYIATFSMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS*
Ga0150983_1302000123300011120Forest SoilGFVTTFALIARVEPDAWVAASFGAIPFTLGLGFFLDSTLVRRDMHAS*
Ga0137393_1140650223300011271Vadose Zone SoilFALIGRVEPDAFTAAAFGIIPTAIGFGYFLDSAMVRRDLHASN*
Ga0137388_1050237113300012189Vadose Zone SoilYMIAFALIARVESNAWVAAAFGVIPLTIGLGFFLDSALIRRDLRAS*
Ga0137363_1107409823300012202Vadose Zone SoilVEPDAWIAASFGAIPLTVGLGFFLDSALIRRDLRAS*
Ga0137363_1151690923300012202Vadose Zone SoilIGFVTTFALIARVEPDAWVAASFGAIPFTLGLGFFLDSTLVRRDMHPS*
Ga0137387_1043323343300012349Vadose Zone SoilITFALIARVEPDAWVAASFGAIPFTVGLGFFLDSSLVRRDLRASA*
Ga0137358_1014652533300012582Vadose Zone SoilLVAGALGYMITFALIARTEPDAWTAVAFGAIPLALGLGFFLDATLVRRDLHV*
Ga0137398_1117865723300012683Vadose Zone SoilLGYMITFALIARTEPDAWTAAAFGAIPLALGLGFFVDSALVRRDLHA*
Ga0137416_1072153113300012927Vadose Zone SoilITFSLIARDNPDAWNAVAFGAIPLALGLGFFLDSALVRRDLHA*
Ga0126369_1243609923300012971Tropical Forest SoilATFALIARLEPEAWNAMAFGAIPLALGLGFFVDAFLVNRDLHA*
Ga0157371_1106203513300013102Corn RhizosphereSDAWTAAAFGIIPLAVGLGFFVDAYLIRRDLRAS*
Ga0181538_1060319723300014162BogLVTPSRSHFIARAEPDASVAAAFGVISLPVGIGFFLDSTLIRRDAKA*
Ga0181531_1029719733300014169BogIVCCALLGREDVDIWRAAAFGVLPLSVGLGFFVDFALIRRDAKQIG*
Ga0181522_1003125043300014657BogGYMATFALIARVQPDMWVAASFGIIPLALGAGFFVDSALVRKDLHG*
Ga0157376_1137115423300014969Miscanthus RhizosphereALGYIATFSMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKA*
Ga0132258_1095303613300015371Arabidopsis RhizosphereHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS*
Ga0132256_10032916123300015372Arabidopsis RhizosphereIGYVATFAMIARVEPDAFIAASFGAIPFMLGLGFFLDSTLVRRDMQHAA*
Ga0132257_10324877023300015373Arabidopsis RhizosphereSRIESDAWIATAFGIIPFAIGAGFLLDSYLIRRDAHGS*
Ga0132255_10279710023300015374Arabidopsis RhizosphereVEPDAWLAAAFGIIPLALGLGCFLDSALIRRDLRAS*
Ga0182036_1003389013300016270SoilTAAAIGYMITFALIARVEPDAWVAASFGIIPLAVGVGFFLDAALVRRDVRTS
Ga0182033_1214408623300016319SoilALIARVESDAWIAASFGLIPLAIGLGFFLDAALVRRDLRAS
Ga0182040_1122590713300016387SoilAAIGYMITFALIARVEPDAWVAASFGIIPLAVGVGFFLDAALVRRDVRTS
Ga0181511_102414213300016702PeatlandLVTPSRSHFIARAEPDASVAAAFGVISLPVGIGFFLDSTLIRRDAKA
Ga0187806_137641623300017928Freshwater SedimentLGYMITFALISRYESDAWVAGAFGIIQLTVGLGFFLDSALIRRDLHS
Ga0187801_1022358433300017933Freshwater SedimentALIARVESDAWIAAAFGIIPLSVGLGFFLDSALIRRDLHG
Ga0187803_1013639513300017934Freshwater SedimentSASIGYTVAFALIARAEPDAWVAAAFGVIPFAVGLGFFLDSTLVRRDLRAS
Ga0187879_1016334913300017946PeatlandIAFALIARSEPDAWMASAFGVIPLAVGVGFFLDSTLIRRDARA
Ga0187817_1026732523300017955Freshwater SedimentMITFALISRYEHDAWVAGAFGIIPLTVGLGFFLDSALIRRDLHS
Ga0187778_1062530423300017961Tropical PeatlandVAGAIGYMLTFGLIGRIESDAWIAAAFGILPLAVGLGFFLDSALIRRDLRAS
Ga0187886_119079113300018018PeatlandTSVAVGYIIAFALIARSEPDAWMASAFGVIPLAVGVGFFLDSTLIRRDARA
Ga0187881_1013435613300018024PeatlandVAVGYIIAFALIARSEPDAWMASAFGVIPLAVGVGFFLDSTLIRRDARA
Ga0187875_1066416013300018035PeatlandAGILLTSVAVGYIIAFALIARSEPDAWMASAFGVIPLAVGVGFFLDSTLIRRDARA
Ga0187871_1086106523300018042PeatlandALIARTDSDAWVAAAFGIIPLCVGVGFFVDSTLVRRDARV
Ga0187887_1011687613300018043PeatlandFALIARSEPDAWMASAFGVIPLAVGVGFFLDSTLIRRDARA
Ga0187769_1006130143300018086Tropical PeatlandALGYMITFALIARVEQDAWIAGAFGVIPLTLGLGFFLDAALVRRDARHS
Ga0187774_1031513543300018089Tropical PeatlandALISRVEPDAWIAGAFGIIPFTVGLGFFLDSFLVRRDLKSS
Ga0210403_1008646913300020580SoilMLTFALIGRMEPDAWVAGTFGVIPFTIGLGFFLDSALVRRDARHS
Ga0210403_1135553113300020580SoilMITFALIARMESDAWFAAAFGIIPLSVGLGFFVDSALIRRDVHA
Ga0210400_1072638313300021170SoilVESEAWVAAAFGIIPLSIGIGFFVDSALIRRDQHA
Ga0210400_1102019513300021170SoilIARAESDAWIAATFGIIPLSVGLGFFVDSMLIRRDLHA
Ga0210388_1097143623300021181SoilALIARVESDAWTAAAFGIIPLSIGIGFFVDSALIRRDLHA
Ga0210387_1074766913300021405SoilALIARIESDAWVAAAFGIIPLSIGLGFFVDSALIRRDLRA
Ga0210391_1036545713300021433SoilYMLTFALIARTESDAWIAAAFGIIPLSVGLGFFVDSALIRRDLHA
Ga0210391_1125714223300021433SoilLIARVESDAWLAAAFGAIPFTLGLGFFLDSALIRRDAHPS
Ga0210392_1143679913300021475SoilTFALIARVESNAWVAAAFGIIPLCVGLGFFLDSALIRRDLHA
Ga0210410_1095968723300021479SoilTFALIARVESDAWMAAAFGIIPLSVGIGFFVDSALIRRDQHA
Ga0242661_112147913300022717SoilLTFALIARVESEAWIAAAFGIIPLSVGLGFFLDSALIRRDLHA
Ga0224564_110726723300024271SoilRVESDAWIAAAFGIIPLSVGFGFFLDSALIRRDLHA
Ga0207660_1128120723300025917Corn RhizosphereLVTGALGYIATFSMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAT
Ga0207704_1003179543300025938Miscanthus RhizosphereIATFSMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS
Ga0207698_1042401613300026142Corn RhizosphereGALGYIATFSMIARVEHDAWVAASFGIIPLAVGLGYFLDSALIRRDVKAS
Ga0209839_1028196023300026294SoilGAIGYIAAFGLVARLTEPEAWTAAAFGVIPLAVGMGFLLDWTLIRRDLRVSS
Ga0209802_108494223300026328SoilFVTTFALIARVEPDAWVAASFGAIPFTLGLGFFLDSTLVRRDMHPS
Ga0209375_127700813300026329SoilTAGAIGYMATFALIARVEPDAWMAAAFGIIPLALGLGFFVDSALIRKDLHA
Ga0209159_111145513300026343SoilMATFALIARVEPDAWMAAAFGIIPLALGLGFFVDSALIRKDLHA
Ga0209056_1041103313300026538SoilISTFALIARVEHEAWMAAAFGIIPLAVGIGFFLDSALIRRDLGAS
Ga0207949_101022833300026999Forest SoilTFALIARVEPDAWVAAPFGAIPFTLGLGFFLDSTLVRRDMHAS
Ga0209524_103151923300027521Forest SoilAGAIGYMITFTLIARVERDAWIAASFGAIPLTVGLGFFLDSALIRRDLRAS
Ga0209060_1037279213300027826Surface SoilFALIARVEPDAWIAGAFGIIPLSVGVGFFLDSAMVRRDVKSS
Ga0209180_1059058813300027846Vadose Zone SoilLVIGALGYMLTFALIARIESEPDVWTAAAFGVIPLAVGIGYFLDATLIRRDLRASS
Ga0209274_1010341333300027853SoilVITFALIARVEPDAWTAAAFGIIPLSIGIGFFVDSALIRRDLHA
Ga0209169_1012910113300027879SoilTFALIARADSDAWLAAAFGIIPLSVGLGFFVDAALIRRDQHA
Ga0209415_1030269123300027905Peatlands SoilLVTGALGYMLTFALIARVESDAWIAAAFGIIPLSVGLGFFVDSALIRHDLHA
Ga0265349_102997013300028037SoilLGYMLTFALIARVESQAWIAAAFGIIPLSVGLGFFVDYALIRRDQHA
Ga0265338_1042089623300028800RhizosphereYMIAFALVARTEPDAWVAAAFGVIPLAIGIGFFLDSTLIRRDAQS
Ga0311371_1249817013300029951PalsaLGYSIAFSLIGHVDADAHIAAAFGIIPFAVGLGFFLDSVLIKRDLKA
Ga0311336_1054651013300029990FenALGYMATFGMIARVESDAWIAAAFGIIPLAIGLGFFVDSALIHRDARAS
Ga0311338_1205316313300030007PalsaFILIARIEPDAWVAAAFGAIPLALGIGFFVDSALIHRDARAS
Ga0265770_108150223300030878SoilFALIARVESNAWIAAAFGIIPLSVGLGFFLDSALIRRDLHA
Ga0170824_11879220123300031231Forest SoilTFALIARVEHDAWIAASFGIIPLAVGLGFFLDSTLVRRDLRAL
Ga0310686_11223196613300031708SoilIGRVESDAWVAAAFGIIPLSVGLGFFVDSALIRRDLHA
Ga0318567_1035418413300031821SoilSRLEPDALIAAAFGIIPLCVGIGYFVDFALLRRDQIA
Ga0318567_1077410513300031821SoilLTAAAIGYMITFALIARVEPDAWVAASFGIIPLAVGVGFFLDAALVRRDVRTS
Ga0308175_10308401113300031938SoilATFALIGRVEQDAWTAAAFGIIPLAIGLGFFVDWALIRRDARA
Ga0306926_1002791413300031954SoilRLEPDALIAAAFGIIPLCVGIGYFVDFALLRRDQIA
Ga0318514_1080152513300032066SoilLGYIATFALISRLEPDALIAAAFGIIPLCVGIGYFVDFALLRRDQIA
Ga0308173_1053274513300032074SoilLGYMATFALIGRVEQDAWTAAAFGIIPLAIGLGFFVDWALIRRDARA
Ga0311301_1114964733300032160Peatlands SoilYMLTFALIARVESDAWMAAAFGIIPLSVGIGFFVDSALIRRDLHA
Ga0307472_10110879213300032205Hardwood Forest SoilVITFALIAKVEPDAWVAASFGAIPFTVGLGFFLDSTLVRRDLKASA
Ga0335081_1004069313300032892SoilGYIATFALLARVEHEAWMAAAFGVIPLALGVGFFLDSALIRRDLRA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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