Metagenome / Metatranscriptome Family F070243

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070243
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	85 residues
Representative Sequence	MKTCSLSEAKSSLGRLADDALQGHPTVISRSGKLLILRAYEPSDPDEFDALIDEGIKSEHFPLTDSVWEGIRQRGKKLAQKLRKR
Number of Associated Samples	103
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.33 %
% of genes near scaffold ends (potentially truncated)	28.46 %
% of genes from short scaffolds (< 2000 bps)	79.67 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.618 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (14.634 % of family members)
Environment Ontology (ENVO)	Unclassified (38.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (29.268 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.36% β-sheet: 8.85% Coil/Unstructured: 47.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF05016	ParE_toxin	32.52
PF02604	PhdYeFM_antitox	17.07
PF12910	PHD_like	4.07
PF02547	Queuosine_synth	4.07
PF09719	C_GCAxxG_C_C	1.63
PF01326	PPDK_N	1.63
PF11013	DUF2851	1.63
PF00294	PfkB	0.81
PF13561	adh_short_C2	0.81
PF03551	PadR	0.81
PF00953	Glycos_transf_4	0.81
PF04055	Radical_SAM	0.81
PF02424	ApbE	0.81
PF00507	Oxidored_q4	0.81
PF01189	Methyltr_RsmB-F	0.81
PF16277	DUF4926	0.81
PF13247	Fer4_11	0.81
PF13307	Helicase_C_2	0.81
PF14559	TPR_19	0.81
PF10672	Methyltrans_SAM	0.81
PF02780	Transketolase_C	0.81
PF01850	PIN	0.81
PF02405	MlaE	0.81
PF07589	PEP-CTERM	0.81
PF13229	Beta_helix	0.81
PF07676	PD40	0.81
PF01053	Cys_Met_Meta_PP	0.81
PF12762	DDE_Tnp_IS1595	0.81
PF02357	NusG	0.81
PF12904	Collagen_bind_2	0.81
PF00932	LTD	0.81
PF10397	ADSL_C	0.81
PF00116	COX2	0.81
PF05860	TPS	0.81
PF00483	NTP_transferase	0.81
PF13442	Cytochrome_CBB3	0.81
PF13231	PMT_2	0.81
PF07963	N_methyl	0.81
PF01370	Epimerase	0.81
PF13173	AAA_14	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	17.07
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	17.07
COG0809	S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)	Translation, ribosomal structure and biogenesis [J]	4.07
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	1.63
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.81
COG0144	16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family	Translation, ribosomal structure and biogenesis [J]	0.81
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.81
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.81
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.81
COG0472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.81
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.81
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.81
COG0838	NADH:ubiquinone oxidoreductase subunit 3 (chain A)	Energy production and conversion [C]	0.81
COG1477	FAD:protein FMN transferase ApbE	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.81
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.81
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.81
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.81
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.81
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.81
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.81
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.81
COG3210	Large exoprotein involved in heme utilization or adhesion	Intracellular trafficking, secretion, and vesicular transport [U]	0.81
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.81
COG4263	Nitrous oxide reductase	Inorganic ion transport and metabolism [P]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.62 %
Unclassified	root	N/A	11.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.62 %
Unclassified	root	N/A	11.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.62 %
Unclassified	root	N/A	11.38 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	67.48 %
Unclassified	root	N/A	11.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.44 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	67.48 %
Unclassified	root	N/A	11.38 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	60.16 %
Unclassified	root	N/A	11.38 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3.25 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.16 %
Unclassified	root	N/A	11.38 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3.25 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.16 %
Unclassified	root	N/A	11.38 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.63 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.16 %
Unclassified	root	N/A	11.38 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	1.63 %
Desulfatitalea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.16 %
Unclassified	root	N/A	11.38 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.63 %
Desulfatitalea tepidiphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea → Desulfatitalea tepidiphila	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0987066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5318	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101260589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300000789\|JGI1027J11758_12751105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	669	Open in IMG/M
3300001213\|JGIcombinedJ13530_103864939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300001213\|JGIcombinedJ13530_105027856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300004091\|Ga0062387_100572916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300004479\|Ga0062595_100013531	Not Available	2803	Open in IMG/M
3300005178\|Ga0066688_10935146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300006237\|Ga0097621_100345826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1321	Open in IMG/M
3300006796\|Ga0066665_11492385	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300006954\|Ga0079219_10989952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	695	Open in IMG/M
3300009167\|Ga0113563_12247961	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300009168\|Ga0105104_10188916	Not Available	1118	Open in IMG/M
3300009176\|Ga0105242_10318694	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1425	Open in IMG/M
3300009177\|Ga0105248_12460569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300009547\|Ga0116136_1025341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1876	Open in IMG/M
3300009630\|Ga0116114_1085303	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300009839\|Ga0116223_10053150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2638	Open in IMG/M
3300010375\|Ga0105239_11515151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	775	Open in IMG/M
3300010379\|Ga0136449_101008438	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300010397\|Ga0134124_11413457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	722	Open in IMG/M
3300011270\|Ga0137391_11070623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300011271\|Ga0137393_10868581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	770	Open in IMG/M
3300012204\|Ga0137374_11115513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300012357\|Ga0137384_10530184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	965	Open in IMG/M
3300012361\|Ga0137360_10526633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1008	Open in IMG/M
3300012411\|Ga0153880_1337062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300012683\|Ga0137398_10985751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300012923\|Ga0137359_10132037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2221	Open in IMG/M
3300012924\|Ga0137413_11697400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300013296\|Ga0157374_10501967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1218	Open in IMG/M
3300014158\|Ga0181521_10110939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1657	Open in IMG/M
3300014161\|Ga0181529_10192075	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatitalea → Desulfatitalea tepidiphila	1205	Open in IMG/M
3300014162\|Ga0181538_10178326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1204	Open in IMG/M
3300014164\|Ga0181532_10606442	Not Available	594	Open in IMG/M
3300014325\|Ga0163163_10045373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4313	Open in IMG/M
3300014491\|Ga0182014_10456717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300014501\|Ga0182024_11417625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	798	Open in IMG/M
3300014839\|Ga0182027_10199454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2322	Open in IMG/M
3300014839\|Ga0182027_10264776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1960	Open in IMG/M
3300014839\|Ga0182027_10899679	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300016750\|Ga0181505_10308799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300016750\|Ga0181505_10775158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300017925\|Ga0187856_1008727	All Organisms → cellular organisms → Bacteria	6050	Open in IMG/M
3300017929\|Ga0187849_1001977	All Organisms → cellular organisms → Bacteria	20587	Open in IMG/M
3300017988\|Ga0181520_10385056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1021	Open in IMG/M
3300017988\|Ga0181520_10935553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300018005\|Ga0187878_1130761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	991	Open in IMG/M
3300018009\|Ga0187884_10189902	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300018014\|Ga0187860_1165321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	935	Open in IMG/M
3300018018\|Ga0187886_1091009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1290	Open in IMG/M
3300018033\|Ga0187867_10104666	Not Available	1647	Open in IMG/M
3300018033\|Ga0187867_10127378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1472	Open in IMG/M
3300018033\|Ga0187867_10344575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	830	Open in IMG/M
3300018034\|Ga0187863_10445655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	723	Open in IMG/M
3300018035\|Ga0187875_10120223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1483	Open in IMG/M
3300018035\|Ga0187875_10713378	Not Available	527	Open in IMG/M
3300018037\|Ga0187883_10413258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300018046\|Ga0187851_10119050	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300018046\|Ga0187851_10199996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1187	Open in IMG/M
3300018083\|Ga0184628_10486164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300018433\|Ga0066667_10680517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	862	Open in IMG/M
3300018468\|Ga0066662_11593801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	681	Open in IMG/M
3300019082\|Ga0187852_1242318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300019786\|Ga0182025_1075994	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300020158\|Ga0194038_1034937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1603	Open in IMG/M
3300020581\|Ga0210399_10569608	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300021180\|Ga0210396_11188337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	639	Open in IMG/M
3300021181\|Ga0210388_10199377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1751	Open in IMG/M
3300021354\|Ga0194047_10262484	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300021602\|Ga0194060_10177710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1110	Open in IMG/M
3300022524\|Ga0224534_1016122	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2109	Open in IMG/M
3300022557\|Ga0212123_10048128	All Organisms → cellular organisms → Bacteria	3956	Open in IMG/M
3300022557\|Ga0212123_10147365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1822	Open in IMG/M
3300023088\|Ga0224555_1001508	All Organisms → cellular organisms → Bacteria	31763	Open in IMG/M
3300025716\|Ga0209746_1021763	Not Available	2439	Open in IMG/M
3300025862\|Ga0209483_1147209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	982	Open in IMG/M
3300025865\|Ga0209226_10084753	Not Available	1446	Open in IMG/M
3300026551\|Ga0209648_10438988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	821	Open in IMG/M
3300027652\|Ga0209007_1097996	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300027819\|Ga0209514_10034200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3955	Open in IMG/M
3300027896\|Ga0209777_10045414	All Organisms → cellular organisms → Bacteria	4017	Open in IMG/M
3300027899\|Ga0209668_10768488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300027899\|Ga0209668_11186097	Not Available	513	Open in IMG/M
3300027905\|Ga0209415_10075069	All Organisms → cellular organisms → Bacteria	3964	Open in IMG/M
3300028573\|Ga0265334_10161316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	788	Open in IMG/M
3300028800\|Ga0265338_10566276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	794	Open in IMG/M
3300029957\|Ga0265324_10153112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	783	Open in IMG/M
3300031231\|Ga0170824_104546723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300031234\|Ga0302325_10582254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1656	Open in IMG/M
3300031234\|Ga0302325_13027408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300031247\|Ga0265340_10115919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1235	Open in IMG/M
3300031524\|Ga0302320_10458040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1570	Open in IMG/M
3300031524\|Ga0302320_10882319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	972	Open in IMG/M
3300031524\|Ga0302320_11073135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	843	Open in IMG/M
3300031525\|Ga0302326_10843562	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300031708\|Ga0310686_102968163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300031708\|Ga0310686_106748014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300031718\|Ga0307474_11630786	Not Available	506	Open in IMG/M
3300031834\|Ga0315290_10207494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1704	Open in IMG/M
3300031910\|Ga0306923_10063060	All Organisms → cellular organisms → Bacteria	4119	Open in IMG/M
3300032076\|Ga0306924_11745915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300032160\|Ga0311301_10000479	All Organisms → cellular organisms → Bacteria	149488	Open in IMG/M
3300032160\|Ga0311301_10031985	All Organisms → cellular organisms → Bacteria	13493	Open in IMG/M
3300032516\|Ga0315273_11643134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	782	Open in IMG/M
3300032770\|Ga0335085_12028545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300032782\|Ga0335082_10452724	Not Available	1147	Open in IMG/M
3300032893\|Ga0335069_11944135	Not Available	621	Open in IMG/M
3300032893\|Ga0335069_12074991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300032897\|Ga0335071_12066903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300033402\|Ga0326728_10001892	All Organisms → cellular organisms → Bacteria	71673	Open in IMG/M
3300033402\|Ga0326728_10028058	All Organisms → cellular organisms → Bacteria	9793	Open in IMG/M
3300033402\|Ga0326728_10086766	All Organisms → cellular organisms → Bacteria	3936	Open in IMG/M
3300033402\|Ga0326728_10374653	Not Available	1235	Open in IMG/M
3300033405\|Ga0326727_10289069	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300033412\|Ga0310810_10057894	All Organisms → cellular organisms → Bacteria	4705	Open in IMG/M
3300033521\|Ga0316616_103805688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300033557\|Ga0316617_101952286	Not Available	602	Open in IMG/M
3300033755\|Ga0371489_0022944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4942	Open in IMG/M
3300033823\|Ga0334837_007640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5298	Open in IMG/M
3300033982\|Ga0371487_0382675	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300034282\|Ga0370492_0440633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.87%
Host-Associated	Host-Associated	8.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.10%
Aquatic	Environmental → Aquatic	35.77%
Plants	Host-Associated → Plants	8.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.28%
Freshwater	Environmental → Aquatic → Freshwater	31.71%
Peat	Environmental → Terrestrial → Peat	13.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.50%
Marine	Environmental → Aquatic → Marine	1.63%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.63%
Roots	Host-Associated → Plants → Roots	1.63%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.38%
Lake	Environmental → Aquatic → Freshwater → Lake	4.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.25%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.44%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.63%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.63%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Loam	Environmental → Terrestrial → Soil → Loam	0.81%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.25%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.44%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.44%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.63%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.63%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	14.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.50%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	6.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.25%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.44%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.44%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.44%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.44%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.44%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.63%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.81%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012411	Freshwater microbial communities from Lake Alinen Mustaj?rvi, Finland - AM7a metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020158	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-6m	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025716	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09870661	2228664022	Soil	MKTCSLSEAKGSLGRLADDALDGRPTVIVRGGKLLILQAYEPPDPEAFDVLIDEGIASQHFELSDRFWQDVRRRGRKFARKRSA
INPhiseqgaiiFebDRAFT_1012605891	3300000364	Soil	MKTCSLSEAKGSLGRLADDALDGRPTVIVRGGKLLILQAYEPPDPEAFDVLIDEGIASQHFELSDRFWQDVRR
JGI1027J11758_127511051	3300000789	Soil	MKTCSLSEAKGSLGRLADDALDGRPTVIVRGGKLLILQAYEPPDPEAFDVLIDEGIASQHFELSDRFWQDVRRRGRKFARKRSAK*
JGIcombinedJ13530_1038649392	3300001213	Wetland	MKTCSLSEAKGSLGRLADNALRGRPTVIVRGGRLLILQAYDPPNPDEFDALIDEGIASEHVPLTEAFWEGVRSRGRKLAGKLAGR*
JGIcombinedJ13530_1050278562	3300001213	Wetland	KSSLGRLADEALKGRPTVIARGGKLLILKAYDPPNPDEFDALIDEGIASEHFPATEAFWKGVRVRGGRLASKTGSR*
Ga0062387_1005729162	3300004091	Bog Forest Soil	MKTCSLSEAKSSLGRLADAALLGHPTVISRGGKLLILRAYEPPDPDEFDALIDDGMRSEHVPLTGSVWEGVRQRGRRLARQLRAKRK*
Ga0062595_1000135311	3300004479	Soil	MKTCSLSEAKSSLGRLADDALNGRPTVIVRGGKLLILQAYEPPDPEAFDALIDEGITSQHVELSGRFWQ
Ga0066688_109351462	3300005178	Soil	MKTCSLSEAKTSLGRLADEALSGRPTVIVRGGRLLILQAYDPPNPNDFDALIDAGIRSEHFSATEAFLQGVRKRGRKLARRMARR*
Ga0097621_1003458262	3300006237	Miscanthus Rhizosphere	MNTCSLSEAKSSLGKLADAALQGRPTVISRGGKLLILKAYDPPDPDEFDALIDEGLNGVHVPVTDSTWDGIRQRGRKLARTLNKRK*
Ga0066665_114923852	3300006796	Soil	MNTCSISRAKSSLGKLADQALRGRPTVIPRGGKLVILQAYEPPDLNDFDDLIREGIESEHFPLTENVWAGIRRRGRKLGNQLKK*
Ga0079219_109899521	3300006954	Agricultural Soil	MKTCSLSEAKSSLGRLADDALNGRPTVIVRGGKLLILQAYEPPDPEAFDALIDEGISSPHVELSARFWHDVRAQGRKLARKLSAK*
Ga0113563_122479611	3300009167	Freshwater Wetlands	MNSCSLSEAKSSLGRLADEALKGRPTVIARGGKLLILQAYDPPAPGAFDALIDEGIASEHLQLTDAFWEGVRVRGRKLARKAVVK*
Ga0105104_101889161	3300009168	Freshwater Sediment	MKTFSLSEAKSSLGRLADAALEGNPTVIVRSGKLLILKAYEPPDPGAFDTLIDEGIKSPHAPLAQDVWEGIRQRGAKLARKFKK*
Ga0105242_103186942	3300009176	Miscanthus Rhizosphere	MKTCSLSEAKSSLGRLADEALEGRPAVIVRGGKLLILQAYNPPSPDAFDALIDEGIASEHFQLTDSFWEGVRVRGRKLARKLAAK*
Ga0105248_124605691	3300009177	Switchgrass Rhizosphere	MKTCSLSEAKSSLGRLADEALEGRPAVIVRGGKLLILQAYNPPSPDAFDALIDEGIASEHFQLTDSFWEGVRVRG
Ga0116136_10253413	3300009547	Peatland	MNTCSLSEAKRSLGRLADAALQGHPTVISRSGKLLILRAYEPPDPGEFDALIDEGIRSEHSPLADSVWEGIRRRGRKLAQRPRRE*
Ga0116114_10853033	3300009630	Peatland	APSPGGRPNQNGPEMSALSEAKSSEGRLAGAALQGHPTVLLRSGKLLIGRASKLSDPDKFDTLIDEGIQSEHFPLTDLVWEGIRQRGRELARKLG*
Ga0116223_100531502	3300009839	Peatlands Soil	MKTCSLSEAKSALGRLADAALEGHPTVISRGGKSLILRAYEPPDADEFDALIDEGIKSKHFPLANPVWEGIRRRGRKLARQSKRQ*
Ga0105239_115151512	3300010375	Corn Rhizosphere	MKTCSLSEAKSSLGRLADDALNGRPTVIVRGGRLLILQAYEPPDPEAFDALIDEGITSQHVELSGRFWQDVRTRGRKLARKLSSK*
Ga0136449_1010084382	3300010379	Peatlands Soil	MNTCSLSEAKSSLGRLADAALEGYPTVISRAGKLLILKAYGPPDPDAFDTLIDEGITSEHSPLNDSVWAGVRRRGRKLAQELKKRE*
Ga0134124_114134572	3300010397	Terrestrial Soil	MKTCSLSEAKGSLGKLADAALAGRPTVIVRGGKLVILRAYEPPDTDEFDALIDEGIKDEHVPLTDQVWEGIRRRGTQLAHKQKGK*
Ga0137391_110706231	3300011270	Vadose Zone Soil	MNTCSISQAKGTLGKLADQALKGQPTVIPRGGKLVILQAYDPPNPNEFDDLIREGIESQHFPLNDGAWAGIRRRGRKLARSHNG*
Ga0137393_108685812	3300011271	Vadose Zone Soil	MNTCSLSEAKTSLGRLADAALQGNPTVISRGGRLLILRAYEPPDLDQFDALIDEGIGSDHVALNEGLWAGVRRRGRKLGRKLTQ*
Ga0137374_111155132	3300012204	Vadose Zone Soil	MKTCSLSEAKSMLGKLADEALAGKPTVISRGGKLLILKTYEPPDPDEFDTVIDQGIRSEHVPLTDEVWEGIRRRGAQKAEEMRARRK*
Ga0137384_105301843	3300012357	Vadose Zone Soil	SPDLDCMHTCSLSEAKSSLGRLADEALNGRPTVIARGGKLLILRAYHPPTPDEFDALIDEGIASDHFPLTAAFWEGVRVRGRKLARKLAVK*
Ga0137360_105266333	3300012361	Vadose Zone Soil	MNTCSISQAKGTLGKLADQALKGQPTVIPRGGKLVILQAYDPPNPNEFDDLIREGVESQHFPLTDGAWAGIRRRGRKLARSHNG*
Ga0153880_13370623	3300012411	Freshwater Sediment	CSLSEAKSSLGRLADEALKGRPTVITRGGKLLILQAYDPPAPDAFDALIDEGIASEHLPLTDAFWEGVRVRGRRLARKAVVK*
Ga0137398_109857511	3300012683	Vadose Zone Soil	QSKFSPDLDCMHTCSLSEAKSSLGRLADEALNGRPTVIARGGKLLILRAYDPPTPDEFDALIDEGIASDHFPLTAAFWEGVRVRGRKLARKLAVK*
Ga0137359_101320372	3300012923	Vadose Zone Soil	MNTCSLSEAKRSLGRLADAALQGNPTVISRGGRLLILRAYDPPDIAEFDALIDEGIDSDHVALKDAIWAGVRRRGRKLARKLMK*
Ga0137413_116974002	3300012924	Vadose Zone Soil	MKTCSLSEAKSSLGRLADDALKGRPTVIVRGGKLLILQAYDPPDPEMFDALIDEGIASEHIRLTDTFWEEVRSREGKLARK
Ga0157374_105019672	3300013296	Miscanthus Rhizosphere	MKTCSLSEAKSSLGRLADDALNGRPTVIVRGGKLLILQAYEPPDPEAFDALIDEGITSQHVELSGRFWQDVRTRGRKLARKLSSK*
Ga0181521_101109391	3300014158	Bog	MSALSEAKSSVGRLAGAALQGHPTVLLRSGKLLIGRASKLSDPDKFDTLIDEGIQSEHFPLTDLVWEGIRQRGRELARKLG*
Ga0181529_101920752	3300014161	Bog	MKTCSLSEAKSSLGWLADAALQGHPTVISRGGKLLVLRAYEPSDPDEFEVLIDEGIQSEHFPPTDSVWKGIRQRGRKLARKAGKG*
Ga0181538_101783261	3300014162	Bog	MNTCSLSEAKSSLGRLADEALKGRPTVIARGGKLLILRAYDPPAPDAFDALIDEGIASEHLPLTDAFWEGVRVRGRKLARKAVVK*
Ga0181532_106064421	3300014164	Bog	TRPCFKHSWQISLILGNSPNAVYFCIKMRTCSISEAKSSLGRLADAAVQGHPTVISHGVKLLILRAYEPSDSGGFDALVDEGIKSDHVSLTDSVWAGIGQRGRKLAQMRRKE*
Ga0163163_100453732	3300014325	Switchgrass Rhizosphere	MKTCSLSEAKSSLGRLADEALEGRPAVIIRGGKLLILQAYNPPSPDAFDALIDEGIASEHFELSDSFWEGVRVRGRKLARKSTAK*
Ga0182014_104567171	3300014491	Bog	MKTCSLSEAKVSLGRLADAALRGHPTVISRGGKLLILRAYEPPDPDEFDALIEEGIGSEHFPLADSVWKGIRQRGTRLAQQLKKGE*
Ga0182024_114176252	3300014501	Permafrost	MKTCSLSEVKSSRGKLADEALQGHPTVISREGKLLILRAYEPSDPGELDSLLDEGKKSEHFPLNGSVWAGIRQRGRALAQK*
Ga0182027_101994543	3300014839	Fen	PCEEKSAVGRIADSALQGHPKVMARGGKVLIWSASELSDPDKFDALIDEGIQSEHFPLTDLVWEGVRQRGRKLVGKLG*
Ga0182027_102647762	3300014839	Fen	MKTCSLSQAKNSLGQLADEALQGRPTVISRGGKLLILRAYEPPDPGEFDALIDEGIKSEHFPLTDSVWEGIRQRGTKLAPKLSCGRIWQNHLGQNHAEFL*
Ga0182027_108996792	3300014839	Fen	MKTCSLSEAKSSLGRLADAALRGHPTVISRSGKLLILRAYEPPDPDEFDGLIDEGIKSEHFPLTDSVWEGIRQRGRHLAQQLKKGK*
Ga0181505_103087991	3300016750	Peatland	IIQVDDSPNAVYFWIKMKTCSLSEAKSSLGRLADAALQGHPTVISRSGKLLILRAFEPSDPDEFDALIDEGIKSEHFSLTDSVWEGIRQRGKKLARKLRKR
Ga0181505_107751581	3300016750	Peatland	LSEAKSSLGRLADEALKGRPTVIARGGKLLILRAYDPPAPDAFDALIDEGIASEHLPLTDAFWEGVRVRGRKLARKAVVK
Ga0187856_10087275	3300017925	Peatland	MNTCSLSEAKRSLGRLADAALQGHPTVISRSGKLLILRAYEPPDPGEFDALIDEGIRSEHSPLADSVWEGIRRRGRKLAQRPRRE
Ga0187849_100197710	3300017929	Peatland	MKTCSLSEAKSSLGRLADAALQGHPTVISRSGKLLILRAYEPPDPGEFDALIDEGIKSEHVPLADSVWEGIRKRGRKLARRLREE
Ga0181520_103850561	3300017988	Bog	KSSLGKLADAALHGHPTVISHGGKLLILRAYEPVDPGEFDALIDEGIKSEHVPLADSVWEGIRQRGRKLAQERSKS
Ga0181520_109355532	3300017988	Bog	MQSIFGPEMKTCSLSEAKSSLGKLADDALGGHPTVICRGGKLLILRAYEPSDSNEFDALIDEGIKSEHFPLADTVWEGIRQ
Ga0187878_11307613	3300018005	Peatland	MNTCSLSEAKSSLGRLADAALQGHPTVISRSGKLLILQAYEPPDPDEFDALIDEGLRSEHVLLTDSVWEGIRRRGRRLARQVKKGK
Ga0187884_101899022	3300018009	Peatland	MSALSEAKSSVGRLAGAALQGHPTVLLRSGKLLIGRASKLSDPDKFDTLIDEGIQSEHFPLTDLVWEGIRQRGRELARKLG
Ga0187860_11653213	3300018014	Peatland	MKTCSLSEAKSSLGKLADAALQGHPTVISRGGKLLILRAYVPPDPGEFDALIDEGIKSEHFPLTDSVWEGIRQRGGKLARAMRKG
Ga0187886_10910094	3300018018	Peatland	MKTCSLSKAKSALGRLADEALKGRPTVIVRGGKLLILQAYDTPDPDAFDRLIDEGIASEHSQLDDPFWEGVRTRGR
Ga0187867_101046661	3300018033	Peatland	MKTCSLSEAKRSLGRLADDALQGHPTVISRSGKLLILRAFEPSDPDEFDALIDEGINSEHFPLTDSVWDGIRQRGKKLAQKLRKG
Ga0187867_101273783	3300018033	Peatland	MNTCSLSEAKSSLGRLADEALKGRPTVIARGGKLLILRAYDPPAPDAFDALIDEGIASEHLPLTDAFWEGVRVRGRKLARKAVVK
Ga0187867_103445751	3300018033	Peatland	MKTCSLSEAKSSLGKLADDALQGHPTVIPRGGKLVILRAYEPTDPGEFDTLIDEGIKSEHFPLADSLWKGIRQRGQRGRQLARKLR
Ga0187863_104456551	3300018034	Peatland	ARNKARILQFRLSKVHAQSIFGSKMKTCSLSEAKSSLGWLADAALQGHPTVISRGGKLLVLRAYEPSDPDEFEVLIDEGIQSEHFPPTDSVWKGIRQRGRKLARKAGKG
Ga0187875_101202233	3300018035	Peatland	MKTCSLSEAKSSLGRLADAALQGHPTVISRSGKLLILRAFEPSDPDEFDALIDEGIKSEHFSLTDSVWEGIRQRGKKLARKLRKR
Ga0187875_107133781	3300018035	Peatland	VRIQFIFGSKMKARSLSEAKSSLGRLADAAVQDHPTVISRGGKLPVLRACEPTDPDEFGVLIDEGIQSEHFPLTEAVWVGIRQRGRKFARKARKR
Ga0187883_104132581	3300018037	Peatland	MKTCSLSEAKSSLGRLADDALLGHPTVIVRGGKLLILRAYEPSDPDEFDALIDEGIQSEHILLTDSVWEGVRQRGRKLARKIG
Ga0187851_101190501	3300018046	Peatland	TCSLSEAKSSLGWLADAALQGHPTVISRGGKLLVLRAYEPSDPDEFEVLIDEGIQSEHFPPTDSVWKGIRQRGRKLARKAGKG
Ga0187851_101999961	3300018046	Peatland	SLSEAKNSLGRLADAALQGHPTVISRGGKLVVLRAYEPTAAGEFDALIDDGIKSEHFPLTDSVWEGIRQRGTKLASKLKRV
Ga0184628_104861642	3300018083	Groundwater Sediment	MKTCSLSEAKNSLGRLADEALNGRPTVIARGGKLLILQAYDPPNPGEFDALIDEGIASEHFPLTDAFWEGVRVRGRKLRRKLFVK
Ga0066667_106805171	3300018433	Grasslands Soil	LNTCSLSRAKSSLGKLADQALRGRPTVIPRGGKLVILQAYEPPDLNDFDDLIREGIESEHFPLTENVWAGIRRRGRKLGNQLKK
Ga0066662_115938011	3300018468	Grasslands Soil	SMHADGLTLYHMSSFLDEMNSCTLSKAKSSLGKLADQALRGHPTVIPRGGKLVILQAYDPPDVNEFDDLIRQGIQSEHFALSDAVWTGIQRRGRKLAKSLRK
Ga0187852_12423182	3300019082	Peatland	MKTRSLSEAKSSLGRLADDALQGHPTVISRGGKLLVLRAYEPSDPDEFDALINEGINGEHYPLTDSVWEGIRQRGRKLARKLRKG
Ga0182025_10759942	3300019786	Permafrost	MKTCNLSEAKGSLGKLADDALRGQPTIISRKGRLVILRAYEPLDPEEFDGLIDEGIKGEHVLLTDSIWKGIRQRGSKLARKMRKG
Ga0194038_10349372	3300020158	Anoxic Zone Freshwater	MNTCSLSEAKSSLGRLADEALKGRPTVIARGGKLLILQAYDPPAPDAFDALIDEGIASEHLLLTDAFWDGVRVRGRELARKAVVK
Ga0210399_105696083	3300020581	Soil	MKTCSLSEAKSSLGRLADAALQGHPTVISRGGKLLILRAYEPPDPGEFDALIDEGIRSEHVPLTDSVWEGVRQRGRKLARRSGAKGK
Ga0210396_111883372	3300021180	Soil	NPGVDTVQIQPILGLHMKTCSLSEAKSSLGRLADAALQGHPTVISRGGKLLILRAYEPPDPDEFDALIGEGIRRKHVPLTDSVWEGVRQRGRKLVRQLRAKVK
Ga0210388_101993771	3300021181	Soil	MKTCSLSEAKSSLGRLADAALQGHPTVISRGGKLLILRAYEPPDPEEFDALIDDGIQGEHVPLTDSVWEGVRQRGRKLARRSGAKGK
Ga0194047_102624842	3300021354	Anoxic Zone Freshwater	FSPISDSMNTCSLSEAKSSLGRLADEALKGRPTVIARGGKLLILQAYDPPAPDAFDALIDEGIASEHLLLTDAFWDGVRVRGRELARKAVVK
Ga0194060_101777101	3300021602	Anoxic Zone Freshwater	MNSCSLSEAKSSLGRLADEALKGRPTVITRGGKLLILQAYDPPAPDAFDALIDEGIASEHLPLTDAFWEGVRVRGRRLARKAVVK
Ga0224534_10161223	3300022524	Soil	MNTCSLSEAKSSLGRLADAALQGHPTVISRSGKLLILRAYEPPDPDEFDALIEEGLRSEHVLLTDSVWEGIRRRGRRLARQVKKGK
Ga0212123_100481285	3300022557	Iron-Sulfur Acid Spring	MKTCSLSEAKSSLGRLADEALQGHPTVISRGGRLLILRAYEPPDEFDALIDEGIESEHEPLSESVWKGIRQRGTKHARKIRKG
Ga0212123_101473652	3300022557	Iron-Sulfur Acid Spring	MKTCSLSEAKSSLGRLADAALRGHPTVISRSGKLLILRAYEPPDLREFDALIDEGVASEHLPLSDSVWKGIRQRGRKLAQRLKKGK
Ga0224555_10015089	3300023088	Soil	MKTCSLSEAKSSLGKLADDALQGHPTVISRGGKLLILRAYEPPDPDEFDGLIDEGIKSEHFPLADSVWEGIRQRGTELAQNKMKGG
Ga0209746_10217632	3300025716	Arctic Peat Soil	MKTCSLSEAKSSLGRLADAALRGHPTVISRSGKLLILRAYEPPDPDEFDGLIDEGINSEHFPLTYSVWEWIRQSGRHLAQQLKKGK
Ga0209483_11472093	3300025862	Arctic Peat Soil	MKTCSLSEAKSSLGRLADDALRGQPTVISRGGKLLVLRAYDPPDDFDALIDEGIKSEHVPLTDSVWDGIRHRGKKLTRKLSKK
Ga0209226_100847532	3300025865	Arctic Peat Soil	MKTCSLSEAKSSLGRLADAALRGHPTVISRSGKLLILRAYEPPDPDEFDGLIDEGIKSEHFPLTDSVWEGIRQRGRHLAQQLKKGK
Ga0209648_104389882	3300026551	Grasslands Soil	MNTCSISQAKGTLGKLADQALKGQPTVIPRGGKLVILQAYDPPNPNEFDDLIREGVESQHFPLTDAGWAGIRRRGRKLARSHNG
Ga0209007_10979961	3300027652	Forest Soil	MNIRRLSEAKRSLGRLADDAVQGNQTLISRAGKLLILKAYDPADPDKFDALIDEGIKSEHFPVTDSVWQGIRKRGRKLARKVEKA
Ga0209514_100342004	3300027819	Groundwater	MKTCSLSEAKTSLGRLADEALRGHPTVIARGGKLLILQAYEPPNPEIFDAFIDEGIASEHFELTDAFWEGVRVRGRKLAREMVAK
Ga0209777_100454147	3300027896	Freshwater Lake Sediment	MNSCSLSEAKSSLGRLADEALKGRPTVIARGGKLLILQAYDPPAPDAFDALIEEGIASEHLQLTDAFWEGVRVRGRKLARKAVVK
Ga0209668_107684881	3300027899	Freshwater Lake Sediment	QPSKFSLNLDCMNSCSLSEAKSSLGRLADEALKGRPTVIARGGKLLILQAYDPPAPDAFDALIDEGMASEHFPLTDAFWEGVRVRGRKLTRKAVVR
Ga0209668_111860971	3300027899	Freshwater Lake Sediment	MNTCSLSEAKSSLGRLADAALQGHPTVISRSGKLLILQAYEPPDPVEFDTLIDEGLRSEHVLLTDSVWEGIRRRGRRLARQVKKGK
Ga0209415_100750692	3300027905	Peatlands Soil	MKTCSISEAKSSLGRLADAALQGYPTVMARGGKLLILRAYEPSDLDEFDALIDEGIRSDHFPLTDSIWKGIRQRGRKFAQKLEKA
Ga0265334_101613162	3300028573	Rhizosphere	ILDPMKTCSMSEAKGTLGRLADEALKGRPTVIVRGGRLVILQAYDPPNPDEFDALIDEGIASEHVPLTEAFWDGVRTRGRELARKLAAK
Ga0265338_105662761	3300028800	Rhizosphere	MKTCSLSEAKSSLGRLADDALQGHPTVISRGGKLLILKAYDPPDPDEFDALIATGINSEHFPLTKSVWAGIRLRGKKLAGQLRKNR
Ga0265324_101531122	3300029957	Rhizosphere	MKTCSVSEAKGSLGRLADEALKGRPSVIVRGGKLLILQAYDPPNPDEFDALIDEGIASEHVPLTDSFWDGVRARGRKQARKLAAK
Ga0170824_1045467232	3300031231	Forest Soil	GRLADEALEGRPTVIVRGGKLLILQAYNPPSQDAFDALIDEGIASEHFQLSDSFWEGVRVRGRKLARKLTTK
Ga0302325_105822543	3300031234	Palsa	MKTCSLSEAKSSLGRLADDALQGHPTVISRAGKLLILKAYEPIDPDEFDALIDEGIKSEHFPLTDSVWEGIRQRGQKLARKLKKVG
Ga0302325_130274081	3300031234	Palsa	NFGPQMKTCSLSEAKSSLGRLADNALQGHPTVISRGGKLLILKAYDPPDPDAFDALIDEGIRSEHFPLTDSVWAGIRQRGQKLARKVKSGG
Ga0265340_101159192	3300031247	Rhizosphere	MKTCSMSEAKGTLGRLADEALKGRPTVIVRGGRLVILQAYDPPNPDEFDALIDEGIASEHVPLTEAFWDGVRTRGRELARKLAAK
Ga0302320_104580402	3300031524	Bog	MKTCSLSEAKSSLGKLADAALQGHPTVISRGGKLLILKAYEPPDPDEFDALIDEGIKSEHFPLSNSVWEGIRQRGKKQAQQMRKE
Ga0302320_108823191	3300031524	Bog	MKTCSLSEAKSSLGKLADAALQGRPTVISRGGKLLILRAYEPPDPDEFDSLIDEGVNSEHFPLTDSVWEGIRQRGEKLARKLKKT
Ga0302320_110731352	3300031524	Bog	MKRCSLSEAKSSLGRLADDALQGHPTVISRGGKLLILRAYDPPDLEEFDNLIDEGINSELFPLSEALWEGIRQRGKKLARELKTRK
Ga0302326_108435622	3300031525	Palsa	MKTCSLSEAMSSLGRLADEALQGHPTVISRSGKLLILRAYEPSDPNEFDALIDEGIKSEHFPLTDSVWKGIRQRGRKLAQKQ
Ga0310686_1029681631	3300031708	Soil	MKTCSLSEAKSSLGRLADDALQGHTTVISRGGKLLILRAYDPPDPDEFDDLIDEGIKSEHVALTDSVWDGIRQRGRKLAQKLKKGR
Ga0310686_1067480141	3300031708	Soil	MKTCSLSEAKSSLGRLADDALQGHPTVISRGGKLLILRAYEPPDPDEFGRLIDEGINSEHAPLTESVWKGIRQRGKKL
Ga0307474_116307862	3300031718	Hardwood Forest Soil	MKTCNLSEAKGSLGKLADDALRGQPTIISRKGKLVILRAYEPFDSKEFDGLIDEGIRSDHVLLTDSIWKGIRQRGNKLARKMRKG
Ga0315290_102074942	3300031834	Sediment	MNTCSLSEAKGSLSRLADAALQGHPTVISRGGKLLILRAYEPSDPEEFDTLIDEGLHSEHFPLTDSVWEGIRRRGRRLARQVKKGK
Ga0306923_100630603	3300031910	Soil	MKTCSLSEAKTSLGRLADEALKGRPTVIARGGKLLILKAYEPPDPDAFDSLIDEGLASEHFEVSDEFWRGVRARGLKIARKLKAR
Ga0306924_117459151	3300032076	Soil	MKTCSLSEAKTSLGRLADEALKGRPTVIARGGKLLILKAYEPPDPDAFDSLIDEGLASEHFEVSDEFWRGV
Ga0311301_1000047915	3300032160	Peatlands Soil	MKTCSLSEAKSALGRLADAALEGHPTVISRGGKSLILRAYEPPDADEFDALIDEGIKSKHFPLANPVWEGIRRRGRKLARQSKRQ
Ga0311301_1003198515	3300032160	Peatlands Soil	MKTCSLSEAKSSLGRLADDALKGHPTVIARGGKLLILRAYEPSDPGEFDALIDEGIESEHFPLADSVWEGIRRRGTKLARKLGKG
Ga0315273_116431343	3300032516	Sediment	MNSCSLSEAKSSLGRLADEALKGRPTVIARGGKLLILQAYDPPAPDAFDAFIDEGIASEHLPLTDAFWEGVRLRGRKLARKAVVR
Ga0335085_120285451	3300032770	Soil	MKTCSLSEAKSALGRLADAALQGQPTVISRGGKLVILQAYEPPDPGAFDALIDEGLQSGHVPVNAALWTGVRRRGAKLAGRCRKP
Ga0335082_104527241	3300032782	Soil	MKTCSLSEAKSSLGRLADAALQGHPTVISRDGKLLILRAYEPPDPDEFDNLIDAGIRSEHFPLTDSVWDGIRKRGRVLAKQLKKGK
Ga0335069_119441351	3300032893	Soil	NMKTCSLSEAKSSLGRLADAALQGHPTVISRDGKLLILRAYEPPDPDEFDNLIDAGIRSEHFPLTDSVWDGIRKRGRVLAKQLKKGK
Ga0335069_120749912	3300032893	Soil	MPELDMKTCSLSEAKSCLGRLADAALQGHPTVIARGGKLVILQAYEPPDPADFDALIDEGIRGDHFPLTDSVWQGIRRRGRRLARR
Ga0335071_120669031	3300032897	Soil	MKTCSLSEAKSSLGRLADDALEGHPTVIARGGKLLILQAYEPPDPGAFDALIDEGIAARHEPVGEALWKGVRARGRKLARRLLEK
Ga0326728_1000189246	3300033402	Peat Soil	MKTCNLSEAKSSLGRLADDALQGRPTVISRGGKLLILRAYEPPDPGEFDALIDEGIKSEHFPLTNWVWEGIRQRGRKLGN
Ga0326728_100280588	3300033402	Peat Soil	MNTCSLSEAKRSLGRLADAALRGHPTVISRGGKLLILRAYEPPDPEEFDGLIDEGIGSEHVPLADSVWEGIRQRGRKLAQQLKKGK
Ga0326728_100867664	3300033402	Peat Soil	MKTCSLSEAKSSLGRLADDALQGHPTVISRSGKLLILRAYEPSDPDEFDALIDEGIKSEHFPLTDSVWEGIRQRGKKLAQKLRKR
Ga0326728_103746532	3300033402	Peat Soil	MKTCSFSEAKSSPGRLADAALQGHPTVFSRRGKLLILRAYEPSDPGEFDALIAEGINSEHFPLTDSVWEGIRQRGRKLAPKLI
Ga0326727_102890692	3300033405	Peat Soil	MKTCSLSEAKSSLGRLADAALQGHPTVISRSGKLLILRAYEPPDPDEFDDLTDEGIKSKHFPLADSVWEGVRQRGRKLARRSRKD
Ga0310810_100578943	3300033412	Soil	MKTCSLSEAKSSLGRLADDALNGRPTVIVRGGKLLILQAYEPPDPEAFDALIDEGISSPHVELSARFWQDVRAQGRKLARKLSAK
Ga0316616_1038056882	3300033521	Soil	KSSLGQLADAALQGRPTVISRGGKLVILKAYDPPDPDEFDALIDDGIGSEHTPLTPSVWEGIRRGGKRLAQQVKSRK
Ga0316617_1019522861	3300033557	Soil	MNSCSLSEAKSSLGRLADEALKGRPTVIARSGKLLILQAYDPPAPDAFDALIDEGIASEHLQLTDAFWEGVRIRGRKLARTSVVK
Ga0371489_0022944_4096_4356	3300033755	Peat Soil	MKTCSLSEAKVSLGRLADDALRGHPTVISRGGKLLILRAYEPPDPDEFDALIEEGIGSEHFPLGDSVWKGIRQRGTKLAQQLKKGE
Ga0334837_007640_2443_2700	3300033823	Soil	MNSCSLSEAKSSLGRLADEALKGRPTVIARGGKLLILQAYDPPAPDAFDALIDEGIASEHLQLTDAFWEGVRVRGRKLAGKAVGK
Ga0371487_0382675_389_613	3300033982	Peat Soil	MKTCSLSEAKVSLGRLADDALRGHPTVISRGGKLLILRAYEPPDPDEFDALIEEGIGSEHFPLGDSVWKGIRQRG
Ga0326724_0392739_521_736	3300034091	Peat Soil	RLADAALQGHPTVISRGGKLVVLRAYEPLDPGELDALIDEGINSQHFPLTDSVWEGIRKRGSKLARKLRRA
Ga0370492_0440633_301_528	3300034282	Untreated Peat Soil	KSSLGRLADDALAGHPTVIARGGKLLILQAYEPPDPDEFDALIDEGIAAGHVPLTDAVWQGIRRRGRKLAQKIGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070243

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences