NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070319

Metagenome / Metatranscriptome Family F070319

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070319
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 90 residues
Representative Sequence MPIRQYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDPSPLPP
Number of Associated Samples 73
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 23.97 %
% of genes near scaffold ends (potentially truncated) 59.35 %
% of genes from short scaffolds (< 2000 bps) 93.50 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (56.098 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere
(16.260 % of family members)
Environment Ontology (ENVO) Unclassified
(36.585 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(73.984 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.85%    β-sheet: 0.00%    Coil/Unstructured: 53.15%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF13545HTH_Crp_2 4.07
PF00239Resolvase 2.44
PF01068DNA_ligase_A_M 2.44
PF00027cNMP_binding 0.81
PF16694Cytochrome_P460 0.81
PF02735Ku 0.81
PF03466LysR_substrate 0.81
PF06689zf-C4_ClpX 0.81
PF13628DUF4142 0.81
PF10066DUF2304 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 2.44
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 2.44
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 2.44
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 2.44
COG1273Non-homologous end joining protein Ku, dsDNA break repairReplication, recombination and repair [L] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A56.10 %
All OrganismsrootAll Organisms43.90 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_117244731Not Available841Open in IMG/M
3300001686|C688J18823_10577657Not Available718Open in IMG/M
3300001991|JGI24743J22301_10161695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium506Open in IMG/M
3300002568|C688J35102_118532942Not Available569Open in IMG/M
3300002568|C688J35102_118709131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum588Open in IMG/M
3300002568|C688J35102_118727184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2590Open in IMG/M
3300002568|C688J35102_120971699All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae3809Open in IMG/M
3300003571|Ga0007419J51692_1085247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum508Open in IMG/M
3300003579|Ga0007429J51699_1121723Not Available500Open in IMG/M
3300004081|Ga0063454_101438509All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum586Open in IMG/M
3300004114|Ga0062593_102139654Not Available625Open in IMG/M
3300004153|Ga0063455_100313478Not Available869Open in IMG/M
3300004153|Ga0063455_101162348Not Available576Open in IMG/M
3300004157|Ga0062590_102239543Not Available573Open in IMG/M
3300005330|Ga0070690_101326386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium577Open in IMG/M
3300005334|Ga0068869_101953692All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales526Open in IMG/M
3300005335|Ga0070666_10704401All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales741Open in IMG/M
3300005340|Ga0070689_100153563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1858Open in IMG/M
3300005356|Ga0070674_101605086All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium587Open in IMG/M
3300005455|Ga0070663_101425619Not Available614Open in IMG/M
3300005459|Ga0068867_100291892All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1341Open in IMG/M
3300005539|Ga0068853_100350317All Organisms → cellular organisms → Bacteria → Proteobacteria1373Open in IMG/M
3300005548|Ga0070665_102647436All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2502Open in IMG/M
3300005618|Ga0068864_102177537Not Available561Open in IMG/M
3300005844|Ga0068862_100328124All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1414Open in IMG/M
3300006028|Ga0070717_11205741Not Available689Open in IMG/M
3300006038|Ga0075365_10039012All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3090Open in IMG/M
3300006038|Ga0075365_10369625All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1011Open in IMG/M
3300006178|Ga0075367_10295660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1019Open in IMG/M
3300006178|Ga0075367_10579654Not Available713Open in IMG/M
3300006178|Ga0075367_10611034All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria693Open in IMG/M
3300009098|Ga0105245_11956927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales639Open in IMG/M
3300009101|Ga0105247_10010711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5536Open in IMG/M
3300009101|Ga0105247_10898357All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7684Open in IMG/M
3300009143|Ga0099792_10932419Not Available576Open in IMG/M
3300009156|Ga0111538_12826347Not Available608Open in IMG/M
3300009553|Ga0105249_11243829Not Available816Open in IMG/M
3300010375|Ga0105239_12987311Not Available551Open in IMG/M
3300010397|Ga0134124_12324684Not Available577Open in IMG/M
3300010999|Ga0138505_100007355Not Available1198Open in IMG/M
3300011119|Ga0105246_10255023Not Available1394Open in IMG/M
3300011119|Ga0105246_10788864All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7842Open in IMG/M
3300011119|Ga0105246_10932859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7781Open in IMG/M
3300012212|Ga0150985_102330355All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae936Open in IMG/M
3300012212|Ga0150985_103614194Not Available2502Open in IMG/M
3300012212|Ga0150985_104000342Not Available1656Open in IMG/M
3300012212|Ga0150985_104939894Not Available1034Open in IMG/M
3300012212|Ga0150985_104989087Not Available692Open in IMG/M
3300012212|Ga0150985_105428598Not Available810Open in IMG/M
3300012212|Ga0150985_105461144All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium697Open in IMG/M
3300012212|Ga0150985_108029123Not Available849Open in IMG/M
3300012212|Ga0150985_110135485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales524Open in IMG/M
3300012212|Ga0150985_111285739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2938Open in IMG/M
3300012212|Ga0150985_114531247Not Available665Open in IMG/M
3300012212|Ga0150985_116095820Not Available537Open in IMG/M
3300012212|Ga0150985_116182770Not Available563Open in IMG/M
3300012212|Ga0150985_117846391Not Available864Open in IMG/M
3300012212|Ga0150985_119609824All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae590Open in IMG/M
3300012212|Ga0150985_122954151All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales696Open in IMG/M
3300012212|Ga0150985_123025416All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales510Open in IMG/M
3300012469|Ga0150984_101784544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71824Open in IMG/M
3300012469|Ga0150984_102267479Not Available794Open in IMG/M
3300012469|Ga0150984_102307432All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales640Open in IMG/M
3300012469|Ga0150984_103260233Not Available665Open in IMG/M
3300012469|Ga0150984_104320361Not Available1263Open in IMG/M
3300012469|Ga0150984_105167442Not Available1269Open in IMG/M
3300012469|Ga0150984_105989082Not Available511Open in IMG/M
3300012469|Ga0150984_106881571All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B025661030Open in IMG/M
3300012469|Ga0150984_108726306Not Available608Open in IMG/M
3300012469|Ga0150984_109533712Not Available776Open in IMG/M
3300012469|Ga0150984_110118778All Organisms → cellular organisms → Bacteria → Proteobacteria1047Open in IMG/M
3300012469|Ga0150984_110920733Not Available910Open in IMG/M
3300012469|Ga0150984_113980567Not Available653Open in IMG/M
3300012469|Ga0150984_117086578Not Available536Open in IMG/M
3300012469|Ga0150984_117102076Not Available1960Open in IMG/M
3300012469|Ga0150984_122183014Not Available1268Open in IMG/M
3300012469|Ga0150984_123629131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales774Open in IMG/M
3300012939|Ga0162650_100091556Not Available532Open in IMG/M
3300012957|Ga0164303_11028552All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales589Open in IMG/M
3300012987|Ga0164307_10149643All Organisms → cellular organisms → Bacteria → Proteobacteria1535Open in IMG/M
3300012987|Ga0164307_11697123Not Available535Open in IMG/M
3300013296|Ga0157374_10175921All Organisms → cellular organisms → Bacteria → Proteobacteria2089Open in IMG/M
3300013296|Ga0157374_11808676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium636Open in IMG/M
3300013297|Ga0157378_10555394All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71154Open in IMG/M
3300013306|Ga0163162_10254803All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1887Open in IMG/M
3300014325|Ga0163163_10612860All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-131152Open in IMG/M
3300014326|Ga0157380_10392357All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1314Open in IMG/M
3300014969|Ga0157376_10476624All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1222Open in IMG/M
3300015373|Ga0132257_103937637Not Available540Open in IMG/M
3300017792|Ga0163161_11760033Not Available550Open in IMG/M
3300018073|Ga0184624_10058097Not Available1584Open in IMG/M
3300018074|Ga0184640_10036154Not Available1987Open in IMG/M
3300018082|Ga0184639_10512567Not Available603Open in IMG/M
3300018469|Ga0190270_10355543All Organisms → cellular organisms → Bacteria → Proteobacteria1334Open in IMG/M
3300018469|Ga0190270_10722108Not Available992Open in IMG/M
3300018469|Ga0190270_10774225All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium963Open in IMG/M
3300018469|Ga0190270_11300931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales770Open in IMG/M
3300018476|Ga0190274_11336509Not Available804Open in IMG/M
3300021082|Ga0210380_10516217Not Available548Open in IMG/M
3300025903|Ga0207680_10570588Not Available808Open in IMG/M
3300025937|Ga0207669_10961748All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462716Open in IMG/M
3300025961|Ga0207712_10643752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales921Open in IMG/M
3300025972|Ga0207668_10856597All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales807Open in IMG/M
3300026041|Ga0207639_11268427All Organisms → cellular organisms → Bacteria → Proteobacteria691Open in IMG/M
3300026067|Ga0207678_11353810Not Available629Open in IMG/M
3300026075|Ga0207708_10695785Not Available868Open in IMG/M
3300026089|Ga0207648_10181804All Organisms → cellular organisms → Bacteria → Proteobacteria1861Open in IMG/M
3300026095|Ga0207676_12604212Not Available502Open in IMG/M
3300027903|Ga0209488_10944944Not Available601Open in IMG/M
3300028381|Ga0268264_11661839All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7649Open in IMG/M
3300028710|Ga0307322_10192649Not Available554Open in IMG/M
3300028720|Ga0307317_10045461Not Available1399Open in IMG/M
3300028721|Ga0307315_10233163Not Available575Open in IMG/M
3300028755|Ga0307316_10104176Not Available992Open in IMG/M
3300028787|Ga0307323_10165836Not Available798Open in IMG/M
3300028807|Ga0307305_10437344Not Available589Open in IMG/M
3300028810|Ga0307294_10343503Not Available550Open in IMG/M
3300028814|Ga0307302_10631707Not Available532Open in IMG/M
3300028876|Ga0307286_10136774Not Available873Open in IMG/M
3300028885|Ga0307304_10065253Not Available1384Open in IMG/M
3300028885|Ga0307304_10536433Not Available538Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere16.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.45%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere14.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil6.50%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere4.06%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.25%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.44%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.63%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.63%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.63%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.63%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.81%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001991Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2Host-AssociatedOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003571Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_35 (Metagenome Metatranscriptome, Counting Only)Host-AssociatedOpen in IMG/M
3300003579Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)Host-AssociatedOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012939Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_11724473123300000956SoilFISGHAFDFDKMPIRQYLDGERFDPETIRLLGVAFEFAIQALHNWGVDNPPRAAIARAIIGFAKAGERDPERLCDLALERSVKPTIPDANPLPTGGPQ*
C688J18823_1057765723300001686SoilGKMPIRQYLDGESFDPETTRFLGIAFEFAIQALHNWGEDDPPREAIARAIIGYAKAGERDPERLCDLAVEAYSKLIITVSNPLRPPASPQARRGS*
JGI24743J22301_1016169513300001991Corn, Switchgrass And Miscanthus RhizosphereRNYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
C688J35102_11853294213300002568SoilETTRLLGIAFETAIQALHNWGVLDPPREAIARAIIGFAKAGERDPERLCDLALEACSKPIISDPSPLPPHASPQAQPDS*
C688J35102_11870913113300002568SoilMPLRQYLNGERFDPETTRLMGVAFETALQALHYLEVIDPPREAIARAIIGFAKAGEGDPERLCDLALEACAKPIISDSIPFPLHASPPAQPDS*
C688J35102_11872718413300002568SoilMPIRLYLDGERFDSETTRLLGIAFETAIQALHNWGVDDPPRDAIARVIIGFAKAGERDPERLCDLALEACAKPIISDPTPLPPHAAPPAQPDS*
C688J35102_12097169953300002568SoilMPIRQYRDGERFDPETTRLLGIAFEFAIQALHNWGVLDPRREAIAGAIIGFARAGERDPERLCDLALEACSKPIISDPNPLPPYASPPVLPDS*
Ga0007419J51692_108524713300003571Avena Fatua RhizosphereRMCRVALSPVGSDRACYREDGRMPIRQYLDGERFDPETTRLLGVAFEFAIQALHNWGVDDPPREAIARAIIGSAKAGERDPERLCDLAVEAFSKLLLTDPSPLPLHASPPVASGFLNFNQSGERPDR*
Ga0007429J51699_112172313300003579Avena Fatua RhizosphereGKMPIRQYLDGEKFDPETTRLLGLAFEFTIQALHNWGVDDPPREAIARAIISYAKAGERDPERLCDLAVEACSKPIITDPKPLPHHAAQPDS*
Ga0063454_10143850913300004081SoilMPIRQYLDGERFDPETTRFLGIAFEFAIQALHNWGEDDPPREAIARAIIGYAKAGERDPERLCDLAVEAYSKLIITVPNPLRPRASPQARRGSST*
Ga0062593_10213965423300004114SoilMPIRPYLDGERFDVETTRLMGIAFETAIQALRNWGVLDPPREEIARAIIALAKGGERDADRLCDAALKACQPAIVSDPNPLPPLA*
Ga0063455_10031347823300004153SoilMPIRQYLEGERFDPETTRLLGIAFETAIQALHNSGVDDPPREAIARAIIGFAKAGEGDPERLCDLALEACSNLINSDPSPLPPHASPPAQPGS*
Ga0063455_10116234823300004153SoilMPIRQYLDGERFDPETTRFLGIAFEFAIQALHNWGEDDPPREAIARAIIGYAKAGERDPERLCDLAVEAYSKLIITV
Ga0062590_10223954323300004157SoilMPIRNYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKI
Ga0070690_10132638623300005330Switchgrass RhizosphereLDGERFDPETTRLLGIAFEFAIQALHSWGVDDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
Ga0068869_10195369213300005334Miscanthus RhizosphereYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPRDTIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
Ga0070666_1070440123300005335Switchgrass RhizosphereMPIRNYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
Ga0070689_10015356313300005340Switchgrass RhizosphereFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
Ga0070674_10160508613300005356Miscanthus RhizosphereDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
Ga0070663_10142561923300005455Corn RhizosphereMAIRPYLEGQRFDAETTRRMGLAFETAIQARRNWGELDPPREAIAKAIIDLAKGGERDPERLCDGALKACPAVIVSDPSPPPPLV
Ga0068867_10029189233300005459Miscanthus RhizosphereRFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
Ga0068853_10035031743300005539Corn RhizosphereGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
Ga0070665_10264743613300005548Switchgrass RhizosphereMPIRPYLEGQRFDAETTRLMGLAFETAIQARRNWGELDPPREAIAKAIIDLAKGGERDPERLCDGALKACPAVIVSDPSPPPPLVS*
Ga0068864_10217753713300005618Switchgrass RhizosphereLDGHRFPPETIRLMGIAFEMAIQALHNRDVVDPPREAIARTILGFAKAGDPERLCDLALEACAKPIISDPSPLPPHASPPAQPDS*
Ga0068862_10032812413300005844Switchgrass RhizosphereYLDGERFDPETTRLLGIAFEFAIQALHNWGVYDPPRETIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
Ga0070717_1120574113300006028Corn, Switchgrass And Miscanthus RhizosphereMPIRQYLHGERFDPETTRLLGIAFEFAIQALHNWGVDDAPGEAIARAIISFAKAGERDPERLCDVAVEAYSKLTAPNPPLPRAAQPAPPGS*
Ga0075365_1003901263300006038Populus EndosphereEGQRFDAETTRRMGLAFETAIQARRNWGELDPPREAIAKAIIDLAKGGERDPERLCDGALKACPAVIVSDPSPPPPLVS*
Ga0075365_1036962523300006038Populus EndosphereMPIRQFLDGERFDPETTRLLGIAFETAIQALRSWGVDHPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISGPSPLPPHASPPAQPDS*
Ga0075367_1029566043300006178Populus EndosphereMRPYLEGQRFDAETTRLLGLAFETAIQALHTWGDLDPPREAIAKAIIELAKGGERDPERLCDGALKACQGAIVSDPSPPPPLVSRQE
Ga0075367_1057965413300006178Populus EndosphereMAIRPYLEGQRFDAETTRRMGLAFETAIQARRNWGELDPPREAIAKAIIDLAKGGERDPERLCDGALKACPAVIVSDPSPPPP
Ga0075367_1061103423300006178Populus EndosphereMPIRQFLDGERFDPETTRLLGIAFETAIQALRSWGVEHPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISGPSPLPPHASPPAQPDS*
Ga0105245_1195692713300009098Miscanthus RhizosphereKRQTVMPLRQYLDGHKFDFETTRLMGIAFETAIQALHNWGVLDPPREAIARAIIGFAKAGERDPERLCDLALETCSRPIVSDPNPLPSHASPPVLPDF*
Ga0105247_10010711113300009101Switchgrass RhizosphereMPIRNYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSR
Ga0105247_1089835713300009101Switchgrass RhizosphereMPIRQYLDGERFDPETTRLLGIAFETAIQALHWAVDDPPREAIAGAIIGFAKAGERDPERLCDLALATCSKPIISDPSP
Ga0099792_1093241913300009143Vadose Zone SoilMPIRQYLDGERFDPETTRLLGIAFETAIQSLHNWGVLDPPREAIARAIIGFAKAGEREPERLCDLALEACSKPII
Ga0111538_1282634713300009156Populus RhizosphereEPILGPVRAAVFDMPIRQYLDGERFDPETTRLLGIAFETAIQALHNWGVDDPPREAIARAIIDFAKAGERDPERLCDLALEACSKPIISDPSPRSPRASPPAQPDS*
Ga0105249_1124382913300009553Switchgrass RhizosphereMPIRNYLDGERFDPETTRLLGLAFETAIQALHNWGVDHPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIITDPNPFSHHAVQPDS*
Ga0105239_1298731123300010375Corn RhizosphereWLAAVFDHMPIRQYLDGERFDPETTRLLGIAFETAIQALHHWGVVDPSREAIARAIIGFAKAGERDPERLCDLALEACSKPIISDPSPLPPQASPPAQLDS*
Ga0134124_1232468413300010397Terrestrial SoilKMSIRQYLDGETLDRETTRGLAFEFTVQALHNWGVDDPPREAIARAIIGHAKAGERDPERLCDLALEACSKPIISDPSPLPPQASPPAQLDS*
Ga0138505_10000735513300010999SoilMPIRQYLDGERFDPETTRLLGIVFETAIQALRNRGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDPSPLPPQTSRPDS*
Ga0105246_1025502323300011119Miscanthus RhizosphereMAIRPYLEGQRFDAETTRRMGLAFETAIQARRNWGELDPPREAIAKAIIDLAKGGERDPERLCDGALKACPAVIVSDPSPPPPLVS*
Ga0105246_1078886423300011119Miscanthus RhizosphereMPIRQYLDGERFDPETTRLLGIAFETAVQALHHWGVVDAPREAIARAIIGFAKAGERDPERLCDLALEACSKPIISDPSPLPPQGSP
Ga0105246_1093285913300011119Miscanthus RhizosphereMPIREYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKPIISDPNPPPPLVSRREPLDF*
Ga0150985_10233035513300012212Avena Fatua RhizosphereDLVFGWRRPEPATGKDGKMPIRQYLNGERFDPETTRLLGVAFEFTVQALHNWGVDDPPREAIARAIIGDAKAGERDPERLCDLAVEACFKPIITGPRPLPPHDSPLAPPDS*
Ga0150985_10361419443300012212Avena Fatua RhizosphereMPDAFLSGCVEPEPASGKDGKMPIRQYLDGERFDPETTRLLGLAFEFTIQALHNWGVDDPPREAIARAIISYAKAGERDPERLCDLAVEACSKPIITDPKPLPHHAAQPDS*
Ga0150985_10400034213300012212Avena Fatua RhizosphereEKFDPETTRHLGLAFEFTIQALHNWGVDDPPREAIARAIISYAKAGERDPERLCDLAVEACSKPIITDRKPLPHHAAQPDS*
Ga0150985_10493989413300012212Avena Fatua RhizosphereAVFDMPIRHYLDGERFVPETTRLLGIAFEYAIQALHNCGVTDPPREAIARAIIGFARAGERDPERLCDFAVEACAVIGDPSPLPPHAAPPAQPDS*
Ga0150985_10498908713300012212Avena Fatua RhizosphereLDGERVDPETTRLMGIAFETAIQALRNWEVLDPPREAIARAIIGFAKAGERDPERLCDLALEAWSKPIVSDPNPLPPHASPPVLPDS*
Ga0150985_10542859823300012212Avena Fatua RhizosphereMPLRQFLDGYKFDFETTRLMGIAFETAIQALHNWGVLDPPREAIARAIIGFAKAGERDPEHLCDLALEACSKPIVSDPNPLPPHSSPPVLPDS*
Ga0150985_10546114413300012212Avena Fatua RhizosphereMPIRQYLHGERFDPETTRLLGIAFEFAIQALHNWGVDDAPREAIARAIISFAKAGERDPERLCDVAVEAYSKLTAPNPPLPRAAQPAPPGS*
Ga0150985_10802912323300012212Avena Fatua RhizosphereETTRLLGIAFETAIQALHNWGVDDPPREAIARAIVGFGKAGERDPERLCDLALEACSKPIITDPSPLPPHALPRAPPGS*
Ga0150985_11013548513300012212Avena Fatua RhizosphereISTMPIRQYLDGERFDPETTRLLGLAFEFTVQALHNWGIDDPPREAIARAIIGHAKAGERDPERLCDLAVEACSKPIITDPHPLSHHAAQPDS*
Ga0150985_11128573943300012212Avena Fatua RhizosphereMPIRQYLDGEERFDPETTRLLGIALEFAIQALHNWGVVEPPREAIARAIIGFARAGEGDPERLCDLAVEACSKLINTNPSPLPPPRCTPAAAGFLNFSQSGE*
Ga0150985_11347629313300012212Avena Fatua RhizosphereMPIRQYLNGERFDPETTRLLGLAFETAIQALHNGGVDDPPREGIARTIIGFAKGGTRDPERLCELALEVAPNR*
Ga0150985_11453124713300012212Avena Fatua RhizosphereMPIRQYLDGERFDPETTRLLGIAFEFTIQALHNWGIDDPPREAIARAIISYAKAGERDPERLCDLAVEACSKPIITDPNPLPHHAAQPDS*
Ga0150985_11609582023300012212Avena Fatua RhizosphereGRKMPIRQYLDGERFDPETTRLLGIAFEFTVQALHNWGAGDPPREAIAAAIIGHAKAGERDPERLCDLAVEACSKLLITTPNPPRPQVTLEAYQSS*
Ga0150985_11618277013300012212Avena Fatua RhizosphereMPIRQYLDGERFDPETTRLLGVAFEFAIQALHNWGVDDPPREAIARAIIGSAKAGERDPERLCDLAVEAFSKLLLTDPSPLPLHASPPVASGFLNFNQSGERPDR*
Ga0150985_11784639113300012212Avena Fatua RhizosphereMPIRNYLDGERERFDPETTRLLGIAFETAIQALHNWGVDDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDPSPLPPQTSPPVS*
Ga0150985_11960982413300012212Avena Fatua RhizosphereRFEPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACSKPIVSDPNILPPHASPPVLPDT*
Ga0150985_12295415113300012212Avena Fatua RhizosphereRRARTATGKDGKMPIRQYLNGERFDPETTRLLGLAFEFTVQALHNWGVDDPPREAIARAIISDAKAGERDPERLCDLAVKACFKPIITDPNPLSHHAAQPDS*
Ga0150985_12302541623300012212Avena Fatua RhizospherePIRQYLDGERFDPETTRLLGLAFEFTVQALHNWGIDEPPREAIVRAIIGHAKAGERDPERLCDLAVEACSKPIITDANPLSHHAAQPDSSSHCN*
Ga0150984_10178454423300012469Avena Fatua RhizosphereMPIRHYLDGERFDPETTRLLGIAFETAIQALHNWGVDDPPREAIARAIIGFAKAGERDPERLCDLALEAFSKPIISDPSPLPPHASPPAQPDS*
Ga0150984_10226747913300012469Avena Fatua RhizosphereMPIRQYLDGERFDPETTRLLGIALEFAIQALHNWGVVEPPREAIARAIIGFARAGEGDPERLCDLAVEACSKLINTNPSPLPPPPRCTPGAAGFLNFSQSGE*
Ga0150984_10230743213300012469Avena Fatua RhizosphereSFDPETTRLLGIAFETGVKALHTSGVLDPPREAIARVIIGFAKGGERDSERLCDLALETCSNLIISDPSPLPPHASPPVLPDS*
Ga0150984_10326023313300012469Avena Fatua RhizosphereMPLRQYLDGERFDPETTRLLGIAFETAIQALHNGGVDDPPREAIAKAVIGFAKSGERDPERLCDLALEACSKPIISDPSPLPPHASPPAQ
Ga0150984_10432036133300012469Avena Fatua RhizosphereVFDMPIRQYLDGERFDPETTRLLGIAFEFAIQALHNWGVTDPPREAIARAIIGFARAGERDPERLCDFAVEACAVIGDPSPLPPHAAPPAQPDS*
Ga0150984_10516744213300012469Avena Fatua RhizosphereVEGALQFDTMPIRQYLAGERFDPETTRLLGIAFEFTTQALHNWGVYDPPRETIARAIIGFARAGERDPERLCDLAVEACSKVIITDRTPLPPHATQPDS*
Ga0150984_10598908213300012469Avena Fatua RhizosphereMPIRNYLDGERFDPETTRLLGIVFETAIQALHNRGVADPPREAIARAIIGFAKAGERDPERLCDLALEACSKPIISDPSPLPPHASP
Ga0150984_10688157123300012469Avena Fatua RhizosphereMAIRLYLDGERFDPETTRLLGLVFETAIQATHNWDVADSPREAIARALIGFAKAGERDPDRLCDLALAACSNP*
Ga0150984_10872630613300012469Avena Fatua RhizosphereRPYLDGQRFDAETTRLMGLAFETAIQARRNWGELEPPREAIAKAIIDLAKGGERDPERLCDAALKACQAAIVSDPSSPLPLVSRQEPLDL*
Ga0150984_10953371223300012469Avena Fatua RhizosphereMPIRQYLDGERFDPETTRLLGIAFEFAIQALHNWGVLDPPREAIAEAIIGFARAGERDPERLCDLALEAWSKPIVRDPQSSRFNASSKSGEFS*
Ga0150984_11011877823300012469Avena Fatua RhizosphereMPIRQYLNGERFDPETTRLLGVAFEFTVQALHNWGVDDPPREAIARAIIGDAKAGERDPERLCDLAVEACFKPIITGPRPLPPHDSPLAPPDS*
Ga0150984_11055230933300012469Avena Fatua RhizosphereDPETTRLLGLAFETAIQALHNWGVVNPAREAIAKAIIGLAKAGERDPERLCDLALEASFAPIISDPNPLPPERCTAGASGFLNFSQSGERPDR*
Ga0150984_11092073323300012469Avena Fatua RhizosphereMPIRQYLDGERFDPETTRLLGIAFEFAIQALHNWGVIDPPREAIARAIIGFARAGERDPERLCDFAVEACSKSIVGDPGPLPPHAAAPVLPD*
Ga0150984_11398056713300012469Avena Fatua RhizosphereMPIRQYLDGEKFDPETTRLLGIAFETAIQALHNWGVVDPPREAIARAIIGFAKSGERDPDRICDHALEACSKPIISDPTPLPPHASPPVLPDG*
Ga0150984_11708657813300012469Avena Fatua RhizospherePARYEFDMPIRQYLDGERFDPETTRLLGIAFETAIQALHSWGVDDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPTISDPSALPPYTSPLAQPDS*
Ga0150984_11710207623300012469Avena Fatua RhizosphereMPIRQYLDGERFDPETTRLLGLAFEFTIQALHNWGVDDPPREAIARAIISYAKAGERDPERLCDLAVEACSKPIITDPKPLPHHAAQPDS*
Ga0150984_12218301413300012469Avena Fatua RhizosphereAFLSGCVEFEPATVKDGKMPIRQYLDGEKFDPETTRHLGLAFEFTIQALHNWGVDDPPREAIARAIISYAKAGERDPERLCDLAVEACSKPIITDRKPLPHHAAQPDS*
Ga0150984_12362913123300012469Avena Fatua RhizosphereDGERFDPETTRLLGLAFEFTVQALHNWGIDEPPREAIVRAIIGHAKAGERDPERLCDLAVEACSKPIITDANPLSHHAAQPDSSSHCN*
Ga0162650_10009155623300012939SoilMPIRQYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDPSPLPP
Ga0164303_1102855213300012957SoilMPIRQYLDGERFDPETTRLLGIAFEFAIQALHNWGGGDPPREAIAKAIIGYAKAGERDPERLCDLAVEACSNLIITDPSALPSHAAPPVLPD*
Ga0164307_1014964323300012987SoilMPIRNYLDGERFDPETTRLLGIAFEFAIQALHNRGVVDPPRDAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
Ga0164307_1169712313300012987SoilMPIRQYLDGERFDPETMRLLGIAFEFAIQALHNWGGGDPPREAIAKAIIGYAKAGERDPERLCDLAVEACSNLIITDPSALPS
Ga0157374_1017592113300013296Miscanthus RhizosphereMPIRNYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRRAPLDF*
Ga0157374_1180867623300013296Miscanthus RhizosphereMPIRQYLHGERFDPETTRLLGIAFEFAIQALHNWGVDDPPREAIARAIIGFAKGGERDPERLCDLALEACSKPLVTDPSPLPLALHCRGSRIIELEPV*
Ga0157378_1055539423300013297Miscanthus RhizosphereMPIRQYLDGERFDPETTRLLGVAFEFAIQALHNWGVDDPPREAIARAIIGYAKAGERDPELLCDLAVEECSKLTITDPRPLPPHAAQPD*
Ga0163162_1025480353300013306Switchgrass RhizosphereMPIRPYLEGQSFDAETTRLMGIAFETAIEALRNRGVRDPPREEIARAIIDLAKGGERDADRLCDGALKACQPAIISDP
Ga0163163_1061286013300014325Switchgrass RhizosphereRFDPETTRFLGIAFEFAIQALHNWGEDDPPREAIARAIIGYAKAGERDPERLCDLAVEAYSKLIITVPNPLRPPASPQARRGS*
Ga0157380_1039235733300014326Switchgrass RhizosphereMPIRQYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRRE
Ga0157376_1047662433300014969Miscanthus RhizosphereMPIRNYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAFIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF*
Ga0132257_10393763713300015373Arabidopsis RhizosphereMPIRNYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLV
Ga0163161_1176003313300017792Switchgrass RhizosphereMPIRQYLDGERFDPETTRLLGVAFEFVIQALHNWGVDDPPREAIARAIIGYAKAGERDPELLCDLAVEECSKLTITDPRPLPPHAAPPV
Ga0184624_1005809733300018073Groundwater SedimentMPIRQYLDGERFDPETTRLLGIVFETAIQALRNRGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDRSPLPPQTSPPDS
Ga0184640_1003615423300018074Groundwater SedimentMPIRQYLDGERLDPETTRLLGIVFETAIQALRNRGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDRSPLPPQTSPPDS
Ga0184639_1051256723300018082Groundwater SedimentMPIRQYLDGERLDPETTRLLGIVFETAIQALRNRGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISD
Ga0190270_1035554333300018469SoilMPIRPYLDGQRFDAETTRLMGLAFETAIQALRNRGVLDPPREAIAKAVIDHAKGGERDPERLCDAALEACQAAIVSDPSSH
Ga0190270_1072210823300018469SoilMPIRVYLDGHRFPPETIRLMGIAFEMAIQALHNRDVVDPPREAIARAIIDFAKAGERDPERLCDLALESCAKSIISDPSPLPPHASPPAQPDS
Ga0190270_1077422513300018469SoilPSEPYCGHGPAAVFDMPIRHYLDGERFDPETTRLLGIAFETAIQALHNWGADDPPREAIARAIIGFAKAGERDLERLCDLALEACSKPIISDPSPLPPHASPPAQPDS
Ga0190270_1130093113300018469SoilPSEPYCGHGPAAVFDMPIRHYLDGERFDPETTRLLGIAFETAIQALHNWGVDDPPREAIARAIIGFAKAGERDPERLCDLALEACSKPIISDPSPLPPHASPPVLPDS
Ga0190274_1133650913300018476SoilMPIRQYLDGERFDPETIRLLGVAFEFAIQALHNWGVDNPPRAAIARAIIGFAKAGERDPERLCDLALERSVKPTIPDANPLPTGGPQ
Ga0210380_1051621723300021082Groundwater SedimentFDPETTRLLGIVFETAIQALRNRGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDPSPLPPQTSRPDS
Ga0207680_1057058823300025903Switchgrass RhizosphereMPIRNYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF
Ga0207669_1096174813300025937Miscanthus RhizosphereMPIRPYLDGQRFDAETTRLMGIAFETAIEALRNRGVRDPPREEIARAIIDLAKGGERDADRLCDGALKACQPAIVSDPNPLPPLA
Ga0207712_1064375213300025961Switchgrass RhizosphereMPIRNYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPRDTIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF
Ga0207668_1085659723300025972Switchgrass RhizosphereMPIRPYLEGQSFDAETTRLMGIAFETAIEALRNRGVRDPPREEIARAIIDLAKGGERDADRLCDGALKACQPAIISDPSLPPPPDSP
Ga0207639_1126842713300026041Corn RhizosphereNYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF
Ga0207678_1135381023300026067Corn RhizosphereMAIRPYLEGQRFDAETTRRMGLAFETAIQARRNWGELDPPREAIAKAIIDLAKGGERDPERLCDGALKACPAVIVSDPS
Ga0207708_1069578513300026075Corn, Switchgrass And Miscanthus RhizosphereMPIRQYRDGERFDPETTRLLGIAFETAIQALHHWGVVDPPREAIARAIIDFAKAGERDPERLCDLAVEACSKPIISDPNPPPPLVSRRE
Ga0207648_1018180443300026089Miscanthus RhizosphereRFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKVKITDPSPPPPLVSRREPLDF
Ga0207676_1260421223300026095Switchgrass RhizosphereMPIRAYLDGHRFPPETIRLMGIAFEMAIQALHNRDVVDPPREAIARTILGFAKAGDPERLCDLALEACAKPIISD
Ga0209488_1094494423300027903Vadose Zone SoilMPIRQYLDGERFDPETTRLLGIAFETAIQSLHNWRVLDPPREAIARAIIGFAKAGEREPERLCDLALEACSKPII
Ga0268264_1166183913300028381Switchgrass RhizosphereMPIREYLDGERFDPETTRLLGIAFEFAIQALHNWGVVDPPREAIARAIIGFARAGERDPERLCDLAVEACSKPIISDPNPPPPLVSRRE
Ga0307322_1019264913300028710SoilDSETVRLLGIAFEMALQALRSWGVFDPPREAIAKALIDLAKGGERDPERLCHGALKACQRAIISDSNSLPPFTSPPVLPDS
Ga0307317_1004546113300028720SoilMPIGQYLDGEQFDPETARLLGIAFEFAIQALHNWGVVDPPRDAIARAIIGFARAGERDPERLCDLAVEACAKPVISNPSPLPPDAAPPAHADS
Ga0307315_1023316313300028721SoilETTCLLGIVFETAIQALRNRGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDPSPLPPQTSRPDS
Ga0307316_1010417633300028755SoilMPIRPYLDSHRLDPETVRLLGIAFETALQALRSWGVFDPPREAVAKALIDLAKGGERDPERLCDEALKACQGAI
Ga0307323_1016583613300028787SoilMPIGQYLDGEQFDPETARLLGIAFEFAIQALHNWGVVDPPRDAIARAIIGFARAGERDPERLCDLAVEACAKPVISNPSPLPP
Ga0307305_1043734413300028807SoilMPIRPYLDGQRFDAETTRLMGIAFETAIQPLHNRGVIDPPREAIARAIIGSAKAGERDPERLCDLALEACAKPIITDPSPLPPHASPPAQPDS
Ga0307294_1034350313300028810SoilSLQKPYCGLGRAAVFDMPIRQYLDGERLDPETTCLLGIVFETAIQALRNRGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDPSPLPPQTSRPDS
Ga0307302_1063170713300028814SoilRLDPETTRLLGIVFETAIQALRNRGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDPSPLPPQTSRPDS
Ga0307286_1013677413300028876SoilTPIMPIRPYLDSHRLDPETVRLLGIAFETALQALRSWGVFDPPREAVAKALIDLAKGGERDPERLCDEALKACQGAIISVPTPLPSPDAPPRTPDSSS
Ga0307304_1006525323300028885SoilMPIRQYLDGERLDPETTRLLGIVFETAIQALRNRGVVDPPREAIARAIIGFAKAGERDPERLCDLALEACAKPIISDPSPLPPQTSRPDS
Ga0307304_1053643313300028885SoilMPIGQYLDGEQFDPETARLLGIAFEFAIQALHNWGVVDPPRDAIARAIIGFARAGERDPERLCDLAVEACAKPVISNPSPLPPDAAP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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