NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F070351

Metagenome / Metatranscriptome Family F070351

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070351
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 96 residues
Representative Sequence VQIALKPASKALGLHGVFKRGKARKYLIADSAFKRLQVDAPGWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLEQA
Number of Associated Samples 108
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 63.64 %
% of genes near scaffold ends (potentially truncated) 71.54 %
% of genes from short scaffolds (< 2000 bps) 91.87 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.374 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(21.138 % of family members)
Environment Ontology (ENVO) Unclassified
(28.455 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.593 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.18%    β-sheet: 0.00%    Coil/Unstructured: 84.82%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.17
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF00313CSD 4.88
PF00118Cpn60_TCP1 0.81
PF13460NAD_binding_10 0.81
PF04392ABC_sub_bind 0.81
PF03795YCII 0.81
PF13472Lipase_GDSL_2 0.81
PF00589Phage_integrase 0.81
PF00903Glyoxalase 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.81
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.81
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.81

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.37 %
UnclassifiedrootN/A1.63 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000443|F12B_11142021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium543Open in IMG/M
3300001661|JGI12053J15887_10018982All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3836Open in IMG/M
3300001661|JGI12053J15887_10098532All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1586Open in IMG/M
3300002245|JGIcombinedJ26739_101793160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium514Open in IMG/M
3300004463|Ga0063356_106236554All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium511Open in IMG/M
3300004631|Ga0058899_11883830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium531Open in IMG/M
3300005176|Ga0066679_10211672All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1239Open in IMG/M
3300005177|Ga0066690_10891939All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium569Open in IMG/M
3300005181|Ga0066678_10741575All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum653Open in IMG/M
3300005337|Ga0070682_100953190All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium709Open in IMG/M
3300005437|Ga0070710_11200364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium561Open in IMG/M
3300005437|Ga0070710_11480421All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium510Open in IMG/M
3300005545|Ga0070695_101845194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium508Open in IMG/M
3300005556|Ga0066707_10184252All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1340Open in IMG/M
3300005557|Ga0066704_10257237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1185Open in IMG/M
3300005563|Ga0068855_101876415All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum607Open in IMG/M
3300005568|Ga0066703_10324872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium928Open in IMG/M
3300005576|Ga0066708_10712277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium635Open in IMG/M
3300005602|Ga0070762_10618587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium720Open in IMG/M
3300005614|Ga0068856_100769686All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium982Open in IMG/M
3300005718|Ga0068866_10756438All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium672Open in IMG/M
3300005921|Ga0070766_10789195All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium647Open in IMG/M
3300006042|Ga0075368_10459580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium565Open in IMG/M
3300006176|Ga0070765_100386634All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1304Open in IMG/M
3300006177|Ga0075362_10076955All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1532Open in IMG/M
3300006796|Ga0066665_10416685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1109Open in IMG/M
3300006796|Ga0066665_10696110All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium805Open in IMG/M
3300006893|Ga0073928_10230106All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1431Open in IMG/M
3300010326|Ga0134065_10142646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium830Open in IMG/M
3300010864|Ga0126357_1275265All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium524Open in IMG/M
3300011120|Ga0150983_10445614All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium573Open in IMG/M
3300011120|Ga0150983_15708599All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium629Open in IMG/M
3300011270|Ga0137391_10966555All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium694Open in IMG/M
3300012198|Ga0137364_10179590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1543Open in IMG/M
3300012200|Ga0137382_10347211All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1040Open in IMG/M
3300012201|Ga0137365_10967634All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 182619Open in IMG/M
3300012206|Ga0137380_10168615All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1994Open in IMG/M
3300012208|Ga0137376_10455871All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1110Open in IMG/M
3300012210|Ga0137378_11074726All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium719Open in IMG/M
3300012212|Ga0150985_121551074All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium834Open in IMG/M
3300012349|Ga0137387_10276734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1212Open in IMG/M
3300012532|Ga0137373_10538449All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium887Open in IMG/M
3300012683|Ga0137398_10956135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium595Open in IMG/M
3300012685|Ga0137397_10264036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1283Open in IMG/M
3300012904|Ga0157282_10074060All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium895Open in IMG/M
3300012917|Ga0137395_10968404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium611Open in IMG/M
3300012923|Ga0137359_11600199All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium539Open in IMG/M
3300012924|Ga0137413_10874562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium696Open in IMG/M
3300012925|Ga0137419_10114705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1890Open in IMG/M
3300012925|Ga0137419_10836481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium755Open in IMG/M
3300012939|Ga0162650_100073635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium584Open in IMG/M
3300014154|Ga0134075_10140260All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1031Open in IMG/M
3300014165|Ga0181523_10698489All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium554Open in IMG/M
3300014166|Ga0134079_10436556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium617Open in IMG/M
3300014326|Ga0157380_11174299All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium810Open in IMG/M
3300015373|Ga0132257_100887112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1117Open in IMG/M
3300016445|Ga0182038_11755878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium559Open in IMG/M
3300018067|Ga0184611_1301035All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium557Open in IMG/M
3300018076|Ga0184609_10431399All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium608Open in IMG/M
3300018078|Ga0184612_10015238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei3924Open in IMG/M
3300018429|Ga0190272_11957237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium619Open in IMG/M
3300018431|Ga0066655_11105976All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium555Open in IMG/M
3300018469|Ga0190270_12860212All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium545Open in IMG/M
3300019885|Ga0193747_1028293All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1388Open in IMG/M
3300020062|Ga0193724_1042261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium968Open in IMG/M
3300020199|Ga0179592_10016914All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3208Open in IMG/M
3300020199|Ga0179592_10423532All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium578Open in IMG/M
3300020580|Ga0210403_10437789All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1066Open in IMG/M
3300020583|Ga0210401_11347163All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium571Open in IMG/M
3300021404|Ga0210389_11140390All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium601Open in IMG/M
3300021406|Ga0210386_11646003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium531Open in IMG/M
3300021407|Ga0210383_10654589All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium904Open in IMG/M
3300021407|Ga0210383_10995991All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium711Open in IMG/M
3300021433|Ga0210391_10766950All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium755Open in IMG/M
3300021433|Ga0210391_10955685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium668Open in IMG/M
3300021477|Ga0210398_10614171All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium883Open in IMG/M
3300021479|Ga0210410_10682866All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium908Open in IMG/M
3300021479|Ga0210410_11469979All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium574Open in IMG/M
3300022557|Ga0212123_10257241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1249Open in IMG/M
3300022557|Ga0212123_10951904All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium501Open in IMG/M
3300022713|Ga0242677_1048527All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium617Open in IMG/M
3300022726|Ga0242654_10086465All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium961Open in IMG/M
3300023046|Ga0233356_1039319All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium582Open in IMG/M
3300025901|Ga0207688_10223327All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1135Open in IMG/M
3300025915|Ga0207693_10696466All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium787Open in IMG/M
3300025927|Ga0207687_11563558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium566Open in IMG/M
3300026041|Ga0207639_11796894All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium574Open in IMG/M
3300026089|Ga0207648_11089120All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium749Open in IMG/M
3300026304|Ga0209240_1182683All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium635Open in IMG/M
3300026315|Ga0209686_1071488All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1235Open in IMG/M
3300026318|Ga0209471_1112330All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1167Open in IMG/M
3300026320|Ga0209131_1364695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium538Open in IMG/M
3300026330|Ga0209473_1027751All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2587Open in IMG/M
3300026374|Ga0257146_1054530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium647Open in IMG/M
3300026482|Ga0257172_1100343All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium532Open in IMG/M
3300026515|Ga0257158_1083075All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium621Open in IMG/M
3300026551|Ga0209648_10377141All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium953Open in IMG/M
3300026552|Ga0209577_10708345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 182569Open in IMG/M
3300026557|Ga0179587_10021411All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3488Open in IMG/M
3300026557|Ga0179587_10319753All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1003Open in IMG/M
3300026557|Ga0179587_10444824All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium847Open in IMG/M
3300026920|Ga0208575_1000983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3382Open in IMG/M
3300027512|Ga0209179_1046328All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium925Open in IMG/M
3300027616|Ga0209106_1087463All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium699Open in IMG/M
3300027633|Ga0208988_1067308All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium904Open in IMG/M
3300027663|Ga0208990_1087491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium879Open in IMG/M
3300027667|Ga0209009_1190386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium519Open in IMG/M
3300027678|Ga0209011_1023188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2004Open in IMG/M
3300027727|Ga0209328_10172400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium656Open in IMG/M
3300027738|Ga0208989_10178948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium707Open in IMG/M
3300027862|Ga0209701_10055350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2535Open in IMG/M
3300027895|Ga0209624_10933128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium565Open in IMG/M
3300027903|Ga0209488_10136148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1853Open in IMG/M
3300027903|Ga0209488_10631061All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium774Open in IMG/M
3300027903|Ga0209488_10753081All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium694Open in IMG/M
3300031231|Ga0170824_115987448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium829Open in IMG/M
3300031421|Ga0308194_10177091All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium676Open in IMG/M
3300031421|Ga0308194_10387382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium507Open in IMG/M
3300031740|Ga0307468_100277390All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1200Open in IMG/M
3300032075|Ga0310890_10832234All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium733Open in IMG/M
3300032180|Ga0307471_103666679All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium543Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil21.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.63%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil12.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.25%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.25%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.44%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.44%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.44%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.44%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.63%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.63%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000443Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemlyEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006177Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010864Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012939Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015EnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022713Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023046Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MSEnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026920Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)EnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027512Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F12B_1114202113300000443SoilAGRFLLRWVQIALKPASKGLGLHGVFIRGKGXKYLIADSAFKHMQVDAPGACWLDANEHHSGLALRTSGALNCNEWNDGRQALRLGHDASLE*
JGI12053J15887_1001898223300001661Forest SoilMQTALKPASKTLGLHGVSIRGKGLKWAMADSTFKRVQIDARAFQPDTDEHHRGLALRARGATNCSEWNVGREGLRLGHDASLDIGGSTTLSVTGSA*
JGI12053J15887_1009853223300001661Forest SoilMALKPASKAPGIHGVFIRGKSLKFVIADSAFKHMQVEARACWLDAGEHHRGLALRTSGALNCNEWDDGRQALRLGHDASLA*
JGIcombinedJ26739_10179316013300002245Forest SoilMPAGFLLRWVQLALKPASKALGPHGVFIRGKGLECLIADSAFKRKQVDAPGACRLDAEEHHLGLALRTGGAPNCSEWNDGWQMLSLGHDASLE*
Ga0063356_10623655413300004463Arabidopsis Thaliana RhizosphereGPLLRRVQIALKPASKGLGLQGVFIGGNGRMCVVADSAFKRLQVDAPGAYWLDANEHHLGLALRTGGALNCSEWNDGRQALRLGHDASLEWRERNTLCHR*
Ga0058899_1188383023300004631Forest SoilMQITLKPAPKSPGLHRVFIRGEDLKFAVADSAFERMQVDARLCWLDTDKHHRGLALRTGGAANCSEWNDGGQVLRLGHDASLEIGGSATLSVTGNA
Ga0066679_1021167233300005176SoilMQIALKPASKTFGLHWVVIRSKGLKYAIADSAFKRMQVHARTCRLDTDEHHRGLALRTGGPANCSEWKDGRQALRLR
Ga0066690_1089193923300005177SoilGQVLLRWVQIALEPASKAPGLHGVFIRDKGLKFVIADSAFKRMQVDARVCWHNTGEPHPGLALRTSGALNCNEWNGGRKALRLGHDASLE*
Ga0066678_1074157513300005181SoilGGAGVYQCGPVVNITQLAGNSTARLNSSTAKTAGSRRRALLRRVQIALKPASKSLGLHRVFIRGKGRMCVVADSAFKGMQVDARACQLDTDEHHRGLALRTSGALNCNEWNDGRQALRPGHDASLE*
Ga0070682_10095319013300005337Corn RhizosphereVQIALKPASKTLGLHGVFKRGKARKYLIADSAFKRLQVDAPGAYWLDANEHHLGLALRTGGALNCSEWNDGRQALRLGHDASLEWRERNTLCHR*
Ga0070710_1120036413300005437Corn, Switchgrass And Miscanthus RhizosphereEFTKSAGSRRRALLWRVQLALKPASKVLGLHGVFMRGKGFKYLIADSAFERMQVDAPGAHWLDADEHHRSLAPRTGGAPDCSEWNAGRLALRLGHDASLE*
Ga0070710_1148042113300005437Corn, Switchgrass And Miscanthus RhizosphereLKPAPKALGLRGVFKRGKGRKDLIADSAFKRLQVDAPGACWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVMPR
Ga0070695_10184519413300005545Corn, Switchgrass And Miscanthus RhizosphereLKPAPKALGLRGVFKRGKGRKDLIADSAFKRLQVDAPGACWLDANEHHLGLALRTGGAPNCSEWNDGREAWRLGHDASLEQAGAQHSLSPVMPRRRSGDC
Ga0066707_1018425233300005556SoilMAKLRLLAGESETNRAASLLRWMQIALKPASKTLGLHGVFIRGEGFKCVIADSAFKRMQVDARACWLDTSEHHRGPALRAGGALICNEWSAGRRGLRLGHDASLE*
Ga0066704_1025723743300005557SoilMAKLRLLAGESETNRAASLLRWMQIALKPASKTLGLHGVFIRGEGFKCVIADSAFKRMQVDARACWLDTSEHHRGPALRAGGALICNEWSAGR
Ga0068855_10187641513300005563Corn RhizosphereLKPASKALGLHGVFKRGKARKYLIADSAFKRLQVDAPGACWLDANEHHVGLAVRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVMPRRRSGD
Ga0066703_1032487233300005568SoilMAKLRLLAGESETNRAASLLRWMQIALKPASKTLGLHGVFIRGEGFKCVIADSAFKRMQVDARACWLDTSEHHRGPALRAGGALICNEWSAGRRGLRLGHDAS
Ga0066708_1071227723300005576SoilLEPASKAPGLHGVFIRDKGLKFVIADSAFKRMQVDAPGACWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVMPGRRSGDC
Ga0070762_1061858713300005602SoilMPPAHSRRALLRRVQTALKPAAKTIGLHRIFMRGMGLKQAIAHGASKRMQVVARACQLDTDEHHRGLAHRTGGAAANWSEWKDGRQALRLGHDAS
Ga0068856_10076968613300005614Corn RhizosphereLKPASKALGLHGVFKRGKARKYLIADSAFKRLQVDAPGACWLDANEHHVGLAVRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPV
Ga0068866_1075643813300005718Miscanthus RhizosphereVQIALKPASKALGLHGVFKRGKVCKYLIADSAFKRLQIDVPGACWLGANEHHLGLALRTGRALNCSEWNSGREALRLGHDASLEQAGAQHSLSPVMP
Ga0070766_1078919513300005921SoilLKPAPKSPGLHRVFIRGEDLKFAVADSAFERMQVDARLCWLDTDKHHRGLALRTGGAANCSEWNDG
Ga0075368_1045958013300006042Populus EndosphereVQITLKPASKALGLHGVFKRGKSRKYLIADSAFKRLQVDAPGVCWLDANEHHLGLALRTGGPLNCSKWNDGREALRLGHDASLEQAGAQHSLSPV
Ga0070765_10038663413300006176SoilGNSAALLNSSITQSAGSRRRALLWWVQIALKPASKTLGLHGVFIRDKGLKYVSADSAFKRMQVDAPGACWLDADEHHLGLALRTGGALNCNEWNDGRQALRLGHDASLE*
Ga0075362_1007695543300006177Populus EndosphereLKPASKGLGLDRVFIRGKGRMYVVADSAFKGMQVDTRACQLDADEHHRGPALRTSGALNCSEWNDGRQALRLGHGAFPRIGGSATLSVTGNAWEAER*
Ga0066665_1041668523300006796SoilLKPASKTFGLHWVVIRSKGLKYAIADSAFKRMQVHARTCRLDTDEHHRGLALRTGGPANCSEWKDGRQA
Ga0066665_1069611033300006796SoilMAKLRLLAGESETNRAASLLRWMQIALKPASKTLGLHGVFIRGEGFKCVIADSAFKRMQVDARACWLDTSEHHRGPALRAGGALICNEWSA
Ga0073928_1023010613300006893Iron-Sulfur Acid SpringGAGVYQCGPVVNITQLGGNSAALLNSSITKSAGSRRRALLWWVQIALKPASKILGLHGVFIRGKGLKYVIADSAFKRTQVDAPGACWLDADEHHLRLALRTGGALNCNEWNDGRQALRLGHDASLE*
Ga0134065_1014264623300010326Grasslands SoilVQIALKPASKALGLHGVFKRGRARKYLIADSAFKRLQVDASGACWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVMPRRRSGDCLSMRLQGSQ
Ga0126357_127526513300010864Boreal Forest SoilVQIALKPASKALGLHGVFKRGKGRKYLMADSAFKRMQVDAPGACWLDANEHHLGLALRTGGALNCSEWNDGRQALRLGHDASLEQAGAQHSLSPA
Ga0150983_1044561413300011120Forest SoilLKPASKTLGPHGVLIRGKGLKYLIADSAFKRMQVDTSGACWLDADEHHLGLALRTGGAFNCSEWNDGRQALRLGHNASLPQIGGSATLSVTGNALG
Ga0150983_1570859923300011120Forest SoilVQIALKPASKTLGLHGVFVCGKGLKYVIADGAFKPMKVDARAGWLDADKHHRRLAVRTSGALKCNEWNGGRQVLRLGHDASLE*
Ga0137391_1096655523300011270Vadose Zone SoilAGVYQCGPVVNITQLAGNSTALLNSSITKSAGSRRRALLPWVQIALKPASKTLGLHRVFIRGQGLMYAIADSAFKRMQVDARACQLDTDEHHRGLALRTSAALNCNEWNDGRPALRLGHDASLE*
Ga0137364_1017959013300012198Vadose Zone SoilMAKLRLLAGESETNRALSLLRWMQIALKPASKTLGLQGVFIRGEGFKCVIADSAFKRMQVDARACWLDTSEHHRGPALRAGGALICNEWSAGRRGLRLGHDASLE*
Ga0137382_1034721113300012200Vadose Zone SoilLEPASKAPGLHGVFIRDKGLKFVIADSAFKRMQVDARVCWHNTGEPHPGLALRTSGALNCNEWNGGRKALRLGHDASLE*
Ga0137365_1096763423300012201Vadose Zone SoilMAKLRLLAGESETNRAASLLRWMQIALKPASKTLGLHGIFIRGEGFKCVIADSAFKRVQVDPRACWLDTGEHHRDPALRAGGALNCNEWSAGRRGLRLGH
Ga0137380_1016861513300012206Vadose Zone SoilTQLAGNSTALLNSNITKSAGSCRRALPGWVQIALKPASKGLGLHRVFIRGKGRMYVVADGAFKRMQVQARACWLDAGEHHRGLALRTSGALKCNEWNDGRQAFRLGHDASLE*
Ga0137376_1045587113300012208Vadose Zone SoilLKPASKFLGLHRVFIRGKGLKDVFADSAFKRVQVDARANWRDTGEPHRGLALRTGGTLNCSEWNDGRQALRLGHGASLDIGGSNNTLCHR*
Ga0137378_1107472613300012210Vadose Zone SoilAFSWQLLGLLPPYLITAQIALKPTSKTLGLPSVLIRGKGLKYLIADSAFIRMQVDAPGACWLDADEHHRGLALRTGGAPNCNEWNDGRQALGLGHDASLE*
Ga0150985_12155107433300012212Avena Fatua RhizosphereVQIALKPASLALGLHGVFKRGKARKYLIADSAFKRLQVDVPDACWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLETGGSATLSVTGNAYEAER*
Ga0137387_1027673423300012349Vadose Zone SoilLKPASKAPGLHGVFIRDKGLKFVIADSAFERMQVEARACWHDTGEHHRGLALRTSGALNCNEWDDGRQALRLGHDASPSK*
Ga0137373_1053844913300012532Vadose Zone SoilAGVYQCGPVVNITQLAGNSTARLNSSTAKTAGSRRRALLRRVQIALKPASKSLGLHRVFIRGKGRMCVVADSAFKGMQVDARACQLDTDEHHRGLALRTSGALNCNEWNDGRQVLRLGHDASLE*
Ga0137398_1095613513300012683Vadose Zone SoilVQIALKPTSKVLGLHGVFKRGKVRKYLIADSAFKRLQVDAPGACWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDA
Ga0137397_1026403623300012685Vadose Zone SoilLEPASKAPGLHGVFIRDKGLKFVIADSAFKRMQVDTRVCWHDTGEPHPGLALRASGALNCSEWNGGRQAFRLGHDAFPLEIGGSATLSVTGNA*
Ga0157282_1007406023300012904SoilLKPASKGLGLHRVFIRGKGRMYVVADSAFKSMQVDTRACQLDTDEHHRGLALRTSGALKCNEWNDGR
Ga0137395_1096840413300012917Vadose Zone SoilMRDEPAGSRRRVLLWWVQFALKPATKTLGPHGVFICRKGLKYLIADSAFKRMQVDAHGACRLGGDEHHLGLALRTGGAPNCSDWNDGRQDLRLGHDDASLEQAGAQHSLSPVHAGIGR*
Ga0137359_1160019913300012923Vadose Zone SoilLKPASKAPGLHGVFIRDKGLKFVIADSALKRMQVDARVCWHNTGEPHPGLALRTSGALNC
Ga0137413_1087456223300012924Vadose Zone SoilVRSVRRRGFYSPPVHAGGFLLRWVQLALKPAPKALGPHGVFIRRKGRKYLIADSAFKRMQVDAHGACRLDDDEHHLGLALRTDRAAPNCSEWNDRRQVLRLGHDASLEQAGAQHSLSPIHAGIGR*
Ga0137419_1011470523300012925Vadose Zone SoilLKPAPKALGPHGVFIRRKGRKYLIADSAFKRMQVDAHGACRLDDDEHHLGLALRTDRAAPNCSEWNDRRQVLRLGHDASLE*
Ga0137419_1083648113300012925Vadose Zone SoilLKPTPKTLGLHRVFIRGKDLKWAMADSAFKRVQVDARADRRDTGEPHRGLAPRAGGTLNCSEWNGGREGMRLGHDASLDIGGSTTLSVTGNA*
Ga0162650_10007363513300012939SoilRLNSGTTNSAGSRRRALLRRVQIALKPASKALGRHGVFKRGKGRKYLIADSAYKRMQVDAPGVCWLDASEHHLGLALRTGGALNCSEWNDGREALRLGHDASLE*
Ga0134075_1014026013300014154Grasslands SoilVQIALKPASKALGLHGVFKRGKVRKYLIADSAFKRLQVDTPGACWLDANEHHLGLALRARGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVM
Ga0181523_1069848913300014165BogVQIALKPASKIPGLHGVSIRGKRLKYVIADSAFKRIQIDARVCRLDAGEHHRGLAPRTSWALYCNEWNDGRRALRLGHDASLE*
Ga0134079_1043655613300014166Grasslands SoilVQIALKPASKALGLHGVFKRGKARKYLIADSAFKRLQVDAPGWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLEQA
Ga0157380_1117429923300014326Switchgrass RhizosphereLKPASKALGLHGVFKRGKARKYLIADSAFKRLQVDAPGACWLDANEHHVGLAVRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVMP
Ga0132257_10088711213300015373Arabidopsis RhizosphereVQIALKPAPKAFGLRGAFKRGKGRKYLIADSAFKRLQVDAPGACWLDANEHHLGLALRTGGAPNCSEWNDGRETLRLGHDASLEQAGAQHSL
Ga0182038_1175587813300016445SoilLKPASKRLGLCGIFIRSKGLKDLIADSAFKRMQVDVQGACRLDADEHHLGLAPWTGRAPNCSERNDGRQGLRLGHDASLDIGGSTTLSVTGNA
Ga0184611_130103513300018067Groundwater SedimentVQIALKPASKALGLHGVFKRGKARKYLIADSAFKRLQGDAPGACWLDADEHHLGLALRTGGALNCSEWNHGREALRLGHDASLEQAGAQHSLSPVMP
Ga0184609_1043139923300018076Groundwater SedimentVQIALKPASKALGLRGVFKRGKGRKYLIADSAFKRLQVDAPGACWLDANEHHLGLAPRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVMPR
Ga0184612_1001523813300018078Groundwater SedimentMQIALKPASKALGLRGVFKRGKGRKYLIADSAFKRLQVDAPGACWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVMPWEAER
Ga0190272_1195723713300018429SoilVQIALKPASKALGLHGVFKRGKARKYLIADSAFKRLQVDAPGACWLNANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVMPRRRSG
Ga0066655_1110597613300018431Grasslands SoilTQLAGNSTARLNSSTAKTAGSRRRALLRRVQIALKPASKSLGLHRVFIRGKGRMCVVADSAFKGMQVDARACQLDTDEHHRGLALRTSGALNCNEWNDGRQALRPGHDASLE
Ga0190270_1286021213300018469SoilQGQGNQLSSNVGGQPQHRRALLRWVQFALKPAPKALGLRGVFKRGKGRKYLIADSAFKRLQVDAPGACWLNTNEHHRGLALRTSGALNCSEWNDGRQALRLGHDASLK
Ga0193747_102829313300019885SoilRCGVAARPVSSEAFSWQLLGLLPPYLITAQIALKPTSKTLGLLGSSYAARVYLIADSAFIRMQVDAPDACWLDADEHDRGLALRTGGAPNCNEWNDGRQALRLGHDASLE
Ga0193724_104226113300020062SoilVQIALKPTSKALGLHGVFKRGKVRKYLIADSAFKRLQVDAPGACWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVL
Ga0179592_1001691443300020199Vadose Zone SoilMQTALKPASKTLGLHGVSIRGKGLKWAMADSTFKRAQIDARAFQLDIDEHHRGLALRARGATNCSEWNVGREGLRLGHDASLDIGGSTTLSVTGSA
Ga0179592_1042353213300020199Vadose Zone SoilMQTALKPASKTLGLHGVSIRGKGLKWAMADSTFKRVQIDARAFQPDTDEHHRGLALRARGATNCSEWNVGREGLRLGHDASLDIGGSKT
Ga0210403_1043778933300020580SoilLKPAPKTLGFHGIYIGGMGLKYVIADSAFKRIQVDARARELDADKHHRGLALRTGGTPNGGERKDGRQTLRLGHDASLEVGGSATLSVTGNA
Ga0210401_1134716323300020583SoilLLNSSITKSAGSRWRALLWWVQIALKPASKTLGLHGVFIRGKGLKYVIADSAFKRMQVDARARWLDTGEHHRGLAHRTSGALNCNEWNDGRQVLRLGHDASLE
Ga0210388_1131685713300021181SoilVQIALKPASKALGPHRVFKRGKALKGLIADSASKAMQVDVLGACWFDADEHHRSFAPRTSGAPNCCERNDGRDELRLGHEGRPPLNWRERNT
Ga0210389_1114039013300021404SoilTKSAGSRRRALLWWVQIALKPASKTLGLHGVFIRGKGLKYVIADSAFKRMQVDAPGACWLDANEHHLGLALRTGGALNCNEWNDGRQALRLGHDASLE
Ga0210386_1164600313300021406SoilVVNIIGLAGNSAALLNSSITSSITKSAGSRRRALLWWVQIALKPASKTLGLHGVFIRGKGLKYVIAHSAFKRMQVDARACWLDADEHHLGLALRTGGALNCNEWNDGRQALRLGHDASLE
Ga0210383_1065458923300021407SoilLKPAPKSPGLHRVFIRGEDLKFAVADSAFERMQVDARLCWLDTDKHHRGLALRTGGAANCSEWNDGGQVLRLGHDASLEIGGSATLSVTGNAQKAER
Ga0210383_1099599123300021407SoilMQVRVLLYAGSRPRALLRWVQFALKPATKTLGLHGVIIRGKGRKYVMADSAFKRMQIDACACWLDTGKHHRGVALRTSRALNCHEWNDGRQGLRLGHH
Ga0210391_1076695023300021433SoilLKPAPKSPGLHGVFIRGEDLKFAVADSAFERMQVDARLCWLDTDKHHRGLALRTGGAANCSEWNDGGQVLRLGHDASLEI
Ga0210391_1095568513300021433SoilMQVRVLLYAGSRPRALPRWVQIALKPATKTLGLQGGIIRGKGRKYVMADSAFKRMQVDACACWLDTGKHHRGVALRTSRALNCHEWNDGRQGLRLGHDASL
Ga0210398_1061417133300021477SoilLKPAPKSPGLHGVFIRGEDLKFAVADSAFERMQVDARLCWLDTDKHHRGLALRTGGAANCSEWNDGGQVFRLG
Ga0210410_1068286613300021479SoilMQITLKPAPKSPGLHGVFIRGEDLKFAVADSAFERMQVDARLCWLDTDKHHRGLALRTGGAANCSEWNDGGQVLRLGHDASLEIGGSATLSVTGNAQKAER
Ga0210410_1146997923300021479SoilMQVRVPLYAGSRPRALLRRVQFALKPATKTLGLHGVIIRGKSRKYVMADSAFKRMQVDACACWLDTGKHHRGVALRTSRAINCHEWNDGRQGLRLGHDASLKQAGAQHSLS
Ga0212123_1025724113300022557Iron-Sulfur Acid SpringITQLGGNSAALLNSSITKSAGSRRRALLWWVQIALKPASKILGLHGVFIRGKGLKYVIADSAFKRTQVDAPGACWLDADEHHLRLALRTGGALNCNEWNDGRQALRLGHDASLE
Ga0212123_1095190413300022557Iron-Sulfur Acid SpringLKPAPKIPGLHGVGIRGKGLKYVIADSALKRMQIDARVCRLDAGEHHRGLALRTSRALNCNEWNDGRRALRLGHDASLE
Ga0242677_104852713300022713SoilLKPAPKSPGLHGVFIRGEDLKFAVADSAFERMQVDARLCWLDTDKHHRGLALRTGGAANCSEWNDGGQVLRLGHDASLEIGGSATLSVTGNAQK
Ga0242654_1008646513300022726SoilVVNITQLAGNSAALLNSSITKSAGSRQRALLRWVQIALKPASKTLGLHRVFIRGKGLKYVIADSAFKRMQIDARVCRLDACEHHRGLALRTSWALNCNEWNDGRRALRLGHD
Ga0233356_103931913300023046SoilVQIALKPASKGLGLHGVFKRCKGRKYLIADSAFKRMQVDAPGACWLDADEHHMGLALRTGGALNCSEWNDGRQALRLGHDASLEQAGAQHSLSPVMPRRRSGDCLIMRRQGSQTRVN
Ga0207688_1022332733300025901Corn, Switchgrass And Miscanthus RhizosphereRAVRSAGFTPAAPLLRRVQIALKPAPKGLGLQGVFIGGKGRMCVVADSAFKRLQVDAPGAYWLDANEHHLGLALRTGGALNCSEWNDGRQALRLGHDASLEWRERNTLCHR
Ga0207693_1069646613300025915Corn, Switchgrass And Miscanthus RhizosphereSPFEEFTKSAGSRRRALLRWVQIALKPASKTLGLHVVFIRGKGLKYVIADSAFKRMQVDARACWLDTGEHHRGLALRTSGALNCDEWNDGRQALRPGHDASLE
Ga0207687_1156355813300025927Miscanthus RhizosphereLKPASKGLGLDRVFIRGKGRMYVVADSAFKGMQVDTRACQLDADEHHRGPALRTSGALNCSEWNDGRQALRLGHGAFPRIGGSATLSVTGNAWEAER
Ga0207639_1179689423300026041Corn RhizosphereLKPASKALGLHGVFKRGKARKYLIADSAFKRLQVDAPGACWLDANEHHVGLAVRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVMPSRR
Ga0207648_1108912013300026089Miscanthus RhizosphereVQIALKPASKALGLHGVFKRGKARKYLIADSAFKRLQVDAPGACWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPGVPRRR
Ga0209240_118268313300026304Grasslands SoilMRDEPAGSRRRVLLWWVQFALKPATKTLGPHGVFICRKGLKYLIADSAFKRMQVDAHGACRLGGDEHHLGLALRTGGAPNCSDWNDGRQDLRLGHDDAS
Ga0209686_107148813300026315SoilLKPASKTFGLHWVVIRSKGLKDAIADSAFKRMQVHARTCRLDADEHHRGLALRTGGPANCSEWKDGRQAL
Ga0209471_111233013300026318SoilLKPASKTFGLHWVVIRSKGLKYAIADSAFKRMQVHARTCRLDTDEHHRGLALRTGGPANCSEWKDGRQALRLRHDASLEI
Ga0209131_136469513300026320Grasslands SoilVHAGRVLLRWVQIALEPASKAPGLHGVFIRDKGLKFMIADSALKRMQVDARACWLDTGEHHPGLALRTSGALNCNEWNGGRKALRLGHDASLE
Ga0209473_102775133300026330SoilLKPASKTFGLHWVVIRSKGLKYAIADSAFKRMQVHARTCRLDTDEHHRGLALRTGGPANCSEWKDGRQALRLRHDASLEIGGSATLSVTGICPEGDRR
Ga0257146_105453023300026374SoilADAAGSRRRVFLLWRVQIALKPASKAPGLHGVFMRDKGLKFVIADSAFKRKQVDARACWLDTGEHHPGLAFRTSGARNCSEWNGGRKALRLGHDASLDRRERNTLSEVV
Ga0257172_110034313300026482SoilGLLPPYLITAQIALKPTSKTFGLPSVFIRGKGLKYLIADSAFIRMQVDAPGACWLDADEHHRGLALRTGGAPNCNEWNDGRQALRLGHDASLE
Ga0257158_108307523300026515SoilVQIALKPTSKALGLHRVFKRGKVRKYLIADSAFKRLQVDAPGACWLDANEHHLGLALWTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLSPVMPR
Ga0209648_1037714113300026551Grasslands SoilMRDEPAGSRRRVLLWWVQFALKPATKTLGPHGVFICRKGLKYLIADSAFKRMQVDAHGACRLGGDEHHLGLALRTGGAPNCSDWNDGRQDLRLGHDDASLEQAGAQHSLSPVH
Ga0209577_1070834523300026552SoilMAKLRLLAGESETNRAASLLRWMQIALKPASKTLGLHGVFIRGEGFKCVIADSAFKRMQVDARACWLDTSEHHRGPALRAGGALICNEWSAGRRGLRLG
Ga0179587_1002141123300026557Vadose Zone SoilMQTALKPASKTLGLHGVSIRGKGLKWAMADSTFKRVQIDARAFQPDTDEHHRGLALRARGATNCSEWNVGREGLRLGHDASLDIGGSTTLSVTGSA
Ga0179587_1031975313300026557Vadose Zone SoilMKTAKSAGWRRWILPRRMQIALKPASKTSGLHGVFIRGKGLQDVIADSTSKRMQVDAPAGGLDADEHHPGLALRTSGPLNCNEWNDGRQALRLGHDASPRI
Ga0179587_1044482413300026557Vadose Zone SoilLKPASKAPGLHGVFIRDKGLKFVIADSAFKRMQVDTRVCWHDTGEPHPGLALRASGALNCSEWNGGRQAFRLGHDAFPLEIGGSATLSVTGNA
Ga0208575_100098343300026920SoilMSPSVHARRVLLWWVQFALKPATKALGPHGVFIRRKRLKYLIADSAFKRMQVDAHGACRLDGHEHHLGLALRTGGAPNCSEWNDGRQDLRLGHDDASLEQAGAQHSLSPVHAGIGR
Ga0209213_104983333300027383Forest SoilLLTNSKPAGSRPARALLRWVQLALKPASKALGLHGIFIRGKGLKYVIADIAFKRMQVDARARWLDTGEHHLGLALRTGGALKCNRWN
Ga0209179_104632823300027512Vadose Zone SoilSVRRRGFYSPPVHAGGFLLRWVQLALKPAPKALGPHGVFIRRKGRKYLIADSAFKRMQVDAHGACRLDDDEHHLGLALRTDRAAPNCSEWNDRRQVLRLGHDASLE
Ga0209106_108746313300027616Forest SoilLLTNSKPAGSRPARALLRWVQLALKPVSKALGLHGIFIRGKGLKYVIADIAFKRMQVDARARWLDTGEHHLGLALRTGGALKCNRRNGGRQALGLGHDASPRIGG
Ga0208988_106730813300027633Forest SoilVQIALKPTSKVFGLHGVFKRGKVRKYLIADSAFKRLQVDAPGACWLDANEHHLGLALRTGGALNCSEWNDGRQALRLGHDASLEQAGAQHSLSPVMPRRRNGDYLG
Ga0208990_108749123300027663Forest SoilMALKPASKAPGLHGVFIRGKSLKFVIADSAFKHMQVEARACWLDAGEHHRGLALRTSGAFNCNEWDDGRQAL
Ga0209009_119038613300027667Forest SoilYQCGPVVNITQLVGNSTAHLVSREFTKSAGSRRRALPRWVQIALKPASKTLGLHRVFIRGQGLMHAIADSTFKRMQVDARACQLDTDEHHRGLAPRTSGALNCNEWNDGRQALRLGHDASLE
Ga0209011_102318813300027678Forest SoilMRGCLLFMPIKPAGSRRRVLLRWVQFALKPATKTLGPHGVFIRRKGLKYLIADSAFKRMQVDAPGECRLDGDEHHLGLALRTGGAPNCSEWNDGRQAL
Ga0209328_1017240013300027727Forest SoilMPAGFLLRWVQLALKPASKALGPHGVFIRGKGLECLIADSAFKRKQVDAPGACRLDAEEHHLGLALRTGGAPNCSEWNDGWQMLSLGHDASLE
Ga0208989_1017894813300027738Forest SoilMRDEPAGSRRRVLLWWVQFALKPATKTLGPHGVFICRKGLKYLIADRAFKRMQVDAHGACRLGGDEHHLGLALRTGGAPNCSDWNDGRQDLRLGHDDASLEQAGAQHSLSPVHAGIGR
Ga0209701_1005535043300027862Vadose Zone SoilMPIKPAGSRRRVLLRWVQFALKPATKTLGPHGVFIRRKGLKYLIADSAFKRMQVDGPGACRLDADEHHLGLALRTGEAPNCGEWNDGRQGLRLGHDASLEQAGAQHSLSPVHAGIGR
Ga0209624_1093312813300027895Forest SoilLKPASKTFGLHGVCIGSQGLKYVIADSAFKRMQIDARVCRLDAGEHHRGLAPRTSWALNCNEWSDGRRALRLGH
Ga0209488_1013614833300027903Vadose Zone SoilLKPASKAPGLHRVFIRDKGLKFVIADSAFKRMQVDARVYWLDTGEHHRGLALRTSGALNCNEWNDGR
Ga0209488_1063106113300027903Vadose Zone SoilMRDEPAGSRRRVLLWWVQFALKPATKTLGPHGVFICRKGLKYLIADSAFKRMQVDAHGACRLGGDEHHLGLALRTGGAPNCSDWNDGRQDLRWGHDD
Ga0209488_1075308113300027903Vadose Zone SoilVQLALKPATKTFGPHGVFIRRKSLKYLIADSAFKRMQVDGPGACRLDGDEHHLGLALRTGGTPNCSEWNDGRQVLRLGHDASLEQAGAQHSLSPVHAGIGR
Ga0170824_11598744813300031231Forest SoilMASQIPTQQGLFSESWRCRALLRRVQTALKPAAKTLGLHRIFMRGMGLKQAIAHGASKRMQVVARACQLDTDEHHRGLAHRTGGAAANWSEWKDGRQALRLGHDASLE
Ga0308194_1017709123300031421SoilLKPASKALGLHGVFKRGKARKYLIADSAFKRLQVDAPGACWLDANEHHLGLALRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLS
Ga0308194_1038738213300031421SoilVQIALKPTSKVFGLHGVFKRGKVRKYLIADSAFKRLQVDAPGACWLDANEHHRGLALRTGGALNCSEWNDGREALRLGHDASLEQAGAQHSLS
Ga0307468_10027739013300031740Hardwood Forest SoilLKPTSKTFGLHGIFVSGKGLKDMIAYSAFKRVQVDTRVYRRDAGEPHRGPALRTGGALNCSEWNDGREGFGLGHDASLTIGGSTTL
Ga0310890_1083223413300032075SoilLKPASKGLGLHRVFIRGKGRIYVVADSAFKGMQVDTRACQLDTDEHHRGLALRTSRALKCNEWNDGRQALRLGHDAS
Ga0307471_10366667913300032180Hardwood Forest SoilLKPASKAPGLHRVFIRDKRLKFVTADSAFKRMQIDARACWLDTGEHHRGPALRTSGALNCNEWNDGR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.