Metagenome Family F070364

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F070364
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	80 residues
Representative Sequence	LANDYRLTTNDRKGYNSGVNAPTPPKPAADNKHQHHHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR
Number of Associated Samples	108
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.05 %
% of genes near scaffold ends (potentially truncated)	21.95 %
% of genes from short scaffolds (< 2000 bps)	66.67 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.748 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.634 % of family members)
Environment Ontology (ENVO)	Unclassified (25.203 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.911 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.35% β-sheet: 0.00% Coil/Unstructured: 64.65%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01715	IPPT	43.90
PF00486	Trans_reg_C	23.58
PF01745	IPT	8.13
PF00933	Glyco_hydro_3	4.07
PF12770	CHAT	2.44
PF01915	Glyco_hydro_3_C	2.44
PF13414	TPR_11	0.81
PF00490	ALAD	0.81
PF01402	RHH_1	0.81
PF00202	Aminotran_3	0.81
PF03796	DnaB_C	0.81
PF13302	Acetyltransf_3	0.81
PF00158	Sigma54_activat	0.81
PF01979	Amidohydro_1	0.81
PF12836	HHH_3	0.81
PF04542	Sigma70_r2	0.81
PF02518	HATPase_c	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	43.90
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	6.50
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	0.81
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.81
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.81
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.81
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.81
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.81
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.75 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.75 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.75 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.55 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	30.89 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.82 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	30.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.82 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.82 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	17.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.82 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11.38 %
Unclassified	root	N/A	3.25 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig252140	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300000567\|JGI12270J11330_10001540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	17082	Open in IMG/M
3300000567\|JGI12270J11330_10079969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1552	Open in IMG/M
3300001356\|JGI12269J14319_10005144	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11682	Open in IMG/M
3300001593\|JGI12635J15846_10176733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1436	Open in IMG/M
3300004091\|Ga0062387_100003723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4709	Open in IMG/M
3300004091\|Ga0062387_100019250	All Organisms → cellular organisms → Bacteria → Acidobacteria	2780	Open in IMG/M
3300004091\|Ga0062387_100166180	All Organisms → cellular organisms → Bacteria → Acidobacteria	1291	Open in IMG/M
3300004152\|Ga0062386_100106286	All Organisms → cellular organisms → Bacteria → Acidobacteria	2161	Open in IMG/M
3300004152\|Ga0062386_100681406	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	843	Open in IMG/M
3300004152\|Ga0062386_100797402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300005176\|Ga0066679_10084854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1899	Open in IMG/M
3300005178\|Ga0066688_10513295	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300005467\|Ga0070706_100042347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4206	Open in IMG/M
3300005518\|Ga0070699_100405550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1233	Open in IMG/M
3300005554\|Ga0066661_10246917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300005610\|Ga0070763_10126585	All Organisms → cellular organisms → Bacteria → Acidobacteria	1314	Open in IMG/M
3300006041\|Ga0075023_100526732	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300006052\|Ga0075029_100041900	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300006055\|Ga0097691_1032574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2029	Open in IMG/M
3300006176\|Ga0070765_100079423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2778	Open in IMG/M
3300006797\|Ga0066659_11520945	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300006893\|Ga0073928_10014817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8565	Open in IMG/M
3300007255\|Ga0099791_10630208	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300007258\|Ga0099793_10485303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300009029\|Ga0066793_10359702	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300009521\|Ga0116222_1472472	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300009523\|Ga0116221_1494285	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300009624\|Ga0116105_1054761	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300009700\|Ga0116217_10003588	All Organisms → cellular organisms → Bacteria → Acidobacteria	14019	Open in IMG/M
3300009764\|Ga0116134_1138304	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300009824\|Ga0116219_10103335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1662	Open in IMG/M
3300010339\|Ga0074046_10000559	All Organisms → cellular organisms → Bacteria → Acidobacteria	34141	Open in IMG/M
3300010341\|Ga0074045_10007775	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9116	Open in IMG/M
3300010343\|Ga0074044_10979228	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300011120\|Ga0150983_14863766	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300011269\|Ga0137392_10176555	All Organisms → cellular organisms → Bacteria → Acidobacteria	1738	Open in IMG/M
3300011269\|Ga0137392_11444895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300012096\|Ga0137389_10003097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10245	Open in IMG/M
3300012096\|Ga0137389_10561409	All Organisms → cellular organisms → Bacteria → Acidobacteria	980	Open in IMG/M
3300012189\|Ga0137388_11826389	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300012202\|Ga0137363_10515262	Not Available	1005	Open in IMG/M
3300012202\|Ga0137363_11646107	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300012203\|Ga0137399_10611050	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300012363\|Ga0137390_10661188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300012582\|Ga0137358_10092507	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2044	Open in IMG/M
3300012582\|Ga0137358_10290638	All Organisms → cellular organisms → Bacteria → Acidobacteria	1110	Open in IMG/M
3300012685\|Ga0137397_11348495	Not Available	504	Open in IMG/M
3300012918\|Ga0137396_10389161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1033	Open in IMG/M
3300012918\|Ga0137396_10797591	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300012927\|Ga0137416_10155787	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1793	Open in IMG/M
3300014489\|Ga0182018_10004309	All Organisms → cellular organisms → Bacteria → Acidobacteria	12066	Open in IMG/M
3300014490\|Ga0182010_10025587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2712	Open in IMG/M
3300014490\|Ga0182010_10223234	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300014491\|Ga0182014_10000922	All Organisms → cellular organisms → Bacteria	40087	Open in IMG/M
3300014496\|Ga0182011_10254810	All Organisms → cellular organisms → Bacteria → Acidobacteria	1177	Open in IMG/M
3300014498\|Ga0182019_10480375	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300014502\|Ga0182021_10897289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300014638\|Ga0181536_10521966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300014838\|Ga0182030_10148226	All Organisms → cellular organisms → Bacteria → Acidobacteria	2992	Open in IMG/M
3300015241\|Ga0137418_10323337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1282	Open in IMG/M
3300017823\|Ga0187818_10043781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1922	Open in IMG/M
3300017934\|Ga0187803_10218568	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300017955\|Ga0187817_10607160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300017955\|Ga0187817_11100124	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300018057\|Ga0187858_10721634	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300018088\|Ga0187771_10246970	All Organisms → cellular organisms → Bacteria → Acidobacteria	1488	Open in IMG/M
3300018090\|Ga0187770_10469313	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300018468\|Ga0066662_10131787	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300019888\|Ga0193751_1020868	All Organisms → cellular organisms → Bacteria → Acidobacteria	3228	Open in IMG/M
3300020579\|Ga0210407_10011715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6522	Open in IMG/M
3300020580\|Ga0210403_10015510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6116	Open in IMG/M
3300020581\|Ga0210399_10395070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1153	Open in IMG/M
3300021171\|Ga0210405_10132132	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300021478\|Ga0210402_11232669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300021479\|Ga0210410_11195792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300023090\|Ga0224558_1006301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8334	Open in IMG/M
3300023090\|Ga0224558_1042886	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300025527\|Ga0208714_1008122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2783	Open in IMG/M
3300025581\|Ga0208355_1125163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300025604\|Ga0207930_1117950	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300025619\|Ga0207926_1021947	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2000	Open in IMG/M
3300025910\|Ga0207684_10463906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1087	Open in IMG/M
3300026318\|Ga0209471_1276899	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300026331\|Ga0209267_1189094	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300026542\|Ga0209805_1219462	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300026551\|Ga0209648_10000766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	25115	Open in IMG/M
3300027381\|Ga0208983_1098548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300027570\|Ga0208043_1134186	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300027591\|Ga0209733_1007867	All Organisms → cellular organisms → Bacteria	2771	Open in IMG/M
3300027604\|Ga0208324_1009220	All Organisms → cellular organisms → Bacteria → Acidobacteria	3257	Open in IMG/M
3300027616\|Ga0209106_1101412	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300027633\|Ga0208988_1107434	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300027645\|Ga0209117_1003547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5442	Open in IMG/M
3300027663\|Ga0208990_1016550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2436	Open in IMG/M
3300027674\|Ga0209118_1044459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1327	Open in IMG/M
3300027783\|Ga0209448_10000018	All Organisms → cellular organisms → Bacteria → Acidobacteria	62985	Open in IMG/M
3300027812\|Ga0209656_10133750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1262	Open in IMG/M
3300027854\|Ga0209517_10010598	All Organisms → cellular organisms → Bacteria → Acidobacteria	10218	Open in IMG/M
3300027855\|Ga0209693_10162842	All Organisms → cellular organisms → Bacteria → Acidobacteria	1101	Open in IMG/M
3300027896\|Ga0209777_10224339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1494	Open in IMG/M
3300027902\|Ga0209048_10651296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300027905\|Ga0209415_10581806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300027910\|Ga0209583_10593789	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300027911\|Ga0209698_10000443	All Organisms → cellular organisms → Bacteria → Acidobacteria	47700	Open in IMG/M
3300028558\|Ga0265326_10017476	All Organisms → cellular organisms → Bacteria → Acidobacteria	2068	Open in IMG/M
3300028800\|Ga0265338_10216453	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300028906\|Ga0308309_10038013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3373	Open in IMG/M
3300031128\|Ga0170823_12407968	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300031234\|Ga0302325_10219716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3230	Open in IMG/M
3300031249\|Ga0265339_10388262	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300031718\|Ga0307474_10092728	All Organisms → cellular organisms → Bacteria → Acidobacteria	2255	Open in IMG/M
3300031754\|Ga0307475_10571289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300031754\|Ga0307475_11127871	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031820\|Ga0307473_10652120	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300032160\|Ga0311301_11907008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300032180\|Ga0307471_100224747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1905	Open in IMG/M
3300032205\|Ga0307472_101746440	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300033402\|Ga0326728_10004738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	39659	Open in IMG/M
3300033402\|Ga0326728_10032593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8659	Open in IMG/M
3300034125\|Ga0370484_0044807	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.56%
Host-Associated	Host-Associated	2.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.05%
Aquatic	Environmental → Aquatic	19.51%
Plants	Host-Associated → Plants	2.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.17%
Freshwater	Environmental → Aquatic → Freshwater	14.63%
Peat	Environmental → Terrestrial → Peat	4.88%
Sediment	Environmental → Aquatic → Sediment	4.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.44%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.01%
Loam	Environmental → Terrestrial → Soil → Loam	13.01%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.44%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.63%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.32%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.32%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.06%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.44%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.06%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.06%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.25%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.25%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.44%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.63%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.63%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.81%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_00315180	2140918008	Soil	VVGRQSFAMHVCKRLTTNDQRLTTEKGYNSRVNAPVPPKPAADNKHQHHHAIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR
JGI12270J11330_100015408	3300000567	Peatlands Soil	MNRLLTTDDRRPTTEKGYNSRVNAPIPPKPVADNKHQHHHAIYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR*
JGI12270J11330_100799692	3300000567	Peatlands Soil	MLANDQRLTTIDRKGYNSGVNAPTPPKPVADSKHQHHHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR*
JGI12269J14319_100051442	3300001356	Peatlands Soil	LLVDRAVCLLTTFASDCRLTTNDHRLFTDEKTYNSGVNAPVPTKPVADREHQDDKHRHQHRHSIYAAEATGLLFMAVLLLILTIIRYWRYIPWSAR*
JGI12635J15846_101767332	3300001593	Forest Soil	LVVSRWSFAVNVCETRFANDHRPTTIDSRKGYNSRVNSPAPPKPASDNKHQHRHSIYAAEATGLLVIAVVLLVLTIIRYWRYIPWSAR*
Ga0062387_1000037233	3300004091	Bog Forest Soil	MPANDHRLTTHDRRKGYNSGVNAPVSPKPVADREDQDNKYRHQHRHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR*
Ga0062387_1000192503	3300004091	Bog Forest Soil	MVVSGQSLVVGRWSLVVRAEDLRRTFSRDHRITAVIQRKGYNIRVNSPVPPKAADDAKQNDKHQHRHSIYAAEATGLLLMAVLLLVLTVIRYWQYIPWNAR*
Ga0062387_1001661801	3300004091	Bog Forest Soil	MAVSKDSRTFVASDHRLTTNDRKGYNSGVNAPTPPKPVADNKHRHHHSIYAAEASGLLLMAVLLLILTIIRYWRYIPWSAR*
Ga0062386_1001062863	3300004152	Bog Forest Soil	MTNDHRLTTRARKSYNSGVNVPVSSKPTADIQQQDNPHQHRHAIYAAEATGLLVMAVLLLILTIIRYWRYIPWSAR*
Ga0062386_1006814062	3300004152	Bog Forest Soil	MNVCKATNDRRLTTEKGYNSRVNSPVPPKPAAESKHQHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR*
Ga0062386_1007974022	3300004152	Bog Forest Soil	MAVSKDSRTFVASDHRLTTNDRKGYNSGVNAPTPPKPVADSKHQHHHAIYAAEATGLLLMAVLLLILTIIRYWRYIPW
Ga0066679_100848542	3300005176	Soil	LPNEVSQRPSTNDQRLSTTIDARKGYNSAVNSPATPKPASDNKHQHRHSIYAAEACGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0066688_105132952	3300005178	Soil	VCETRFANDHRLSTNDYSATTIGERKGYNSAVNSPATPKPASDNKHQHRHSIYAAEACGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0070706_1000423472	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VVYTAILANDRRLATTFHRRKGYNSRVNAPVPPKPVADNKHQHRHASYAAEATGLLLVAVLLLILTIIRYWRYIPWNAH*
Ga0070699_1004055502	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LRNEVSQRPSTIDYRPTPIDARKGYNSAVSSPASPKPASDNKDQHRHSIYAAEATGLLVIAVLLLVLTIIRYWRYIPWSAR*
Ga0066661_102469171	3300005554	Soil	MNVCETRFANDHRLSTNDYSATTIGERKGYNSAVNSPATPKPASDNKHQHRHSIYAAEACGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0070763_101265851	3300005610	Soil	RPTTNDRKGYNSAVNAPVPSKQPSDDKHQHRHSIYAAEAAGLLLIAVLLLILTIIRYWRNIPWSAR*
Ga0075023_1005267322	3300006041	Watersheds	LPTTIDQRLTTEKGYNSAVNSPVQPQPAARDKQHDKHQHHHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR*
Ga0075029_1000419002	3300006052	Watersheds	LHWRVGTIAGFSWAGRPRHTTENSYNSGVNAPVPPKPAADSTHHHRHATYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR*
Ga0097691_10325742	3300006055	Arctic Peat Soil	MFANDQRPTTIDRRKGYNSAVDAPVPPKPAADNKHQHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWRAR*
Ga0075017_1005156402	3300006059	Watersheds	GGRHRHEGAPVVYTVGYNAFVATPASPKPAADDKHRHRHPIYAAEATGLLLMAVLLLILTIIRYWFYIPWSAR*
Ga0070765_1000794233	3300006176	Soil	MKALAADQRPTTNDRKGYNSAVNAPVPSKQPSDDKHQHRHSIYAAEAAGLLLIAVLLLILTIIRYWRNIPWSAR*
Ga0066659_115209452	3300006797	Soil	MFAKRGLPTTIDYRPTTIGERKGYNSAVNSPATPKPASDNKHQHRHSIYAAEACGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0073928_100148173	3300006893	Iron-Sulfur Acid Spring	LLTTSDRRPATSDAPPKGYNSRVNAPVQPKPKTDNHHQDDKHEHRHPIYAAEATGLLVIAVLLLVLTIIRYWRYIPWSVR*
Ga0099791_106302081	3300007255	Vadose Zone Soil	MFAERGLPTTIDYRPTPIDARKGYNSAVNSPATPKPASDNKHQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0099793_104853032	3300007258	Vadose Zone Soil	MNVCETRFANDHRLSTNDYSATTIGERKGYNSAVNSPATPKPASDNKHQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0066793_103597021	3300009029	Prmafrost Soil	MNRLLTTDAQRPTTEKGYNSRVNAPVPPKPVADNKHQHHHAIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR*
Ga0116222_14724722	3300009521	Peatlands Soil	VDRAVCLLTTFASDCRLTTNDHRLFTDEKTYNSGVNAPVPTKPVADREHQDDKHRHQHRHSIYAAEATGLLFMAVLLLILTIIRYWRYIPWSAR*
Ga0116221_14942852	3300009523	Peatlands Soil	DDRRPTTEKGYNSRVNAPIPPKPVADNKHQHHHAIYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR*
Ga0116105_10547611	3300009624	Peatland	TTNDHRPTTEKSYNSRVNSPVPPKPADDPHPDNKHRHHHATYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR*
Ga0116217_100035885	3300009700	Peatlands Soil	LLVDRAVCLLTTFASDCRLTTNDHRLFTDEKTYNSGVNAPVPTKPVADREHQDDKHRHQHRHSIYAAEATGLLFMAVLLLILTVIRYWRYIPWSAR*
Ga0116134_11383042	3300009764	Peatland	MFCERRWLTTTDHRRTTIDRRTRYNSGVNAPVPPRQAADERADNERQDSKHQHHHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWGAR*
Ga0116219_101033352	3300009824	Peatlands Soil	MNRLLTTNDRRPTTEKGYNSRVNAPIPPKPVADNKHQHHHAIYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR*
Ga0074046_1000055919	3300010339	Bog Forest Soil	LANDYRLTTNDRKGYNSGVNAPTPPKPAADNKHQHHHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR*
Ga0074045_100077756	3300010341	Bog Forest Soil	MVVSKRRSQTFFANDQRLTTNDRKGYNSGVNAPTPPKPAADNKHQHHHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR*
Ga0074044_109792281	3300010343	Bog Forest Soil	GGDARHSTSKVESMRLTINDRKSYNSAVNARVPPKPAADNAHHDEHRRHHAIYAAEATGLLLMAVLLLVLTIIRYWRYIPWGAR*
Ga0150983_148637662	3300011120	Forest Soil	PTTIDQRPTPIDARKGYNGAVNSPAPPKPTSDNKHQHRHSIYAAEATGLLVMAVLLLVLTIVRYWRYIPWSAR*
Ga0137392_101765552	3300011269	Vadose Zone Soil	MNVCETRFAKRPATIDQRPTTVDARKGYNSAVNSPASPKPASDNKHQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0137392_114448951	3300011269	Vadose Zone Soil	VFASGVCHRLSTIDYRPPPINARKGYNSAVNSPAPPKPASDNKHQHRHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWNTH*
Ga0137389_100030971	3300012096	Vadose Zone Soil	MNDCEPRFANDHRPTPIDARKGYNSAVNPPAPPKPASDNKHQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0137389_105614092	3300012096	Vadose Zone Soil	MFANEACQRLSTNDHRPTINARKGYNSRVNSPASPKPASDNKHQHRHSIYAAEATGLLVIAVLLLVLTIVRYWRYIPWSAR*
Ga0137388_118263891	3300012189	Vadose Zone Soil	MNACDTRFAKRPATIDQRPTTVDARKGYNSAVNSPASPKPASDNKHQHRHSIYAAEATGLLVIAVVLLVLTIIRYWRYIPWSAR*
Ga0137363_105152622	3300012202	Vadose Zone Soil	FDERFQTTFAERPTTDDQTTNDYRPTKGYNNRVSPPVPMKPVADSKRQDNRHRHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWRAR*
Ga0137363_116461072	3300012202	Vadose Zone Soil	MFANEACQRLSTIDNRPPPTDARKGYNSAVNSPAPPKPASDNKHQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0137399_106110502	3300012203	Vadose Zone Soil	MFAKRGLPTTIDYRPTPIDARKGYNSAVNSPASPKPASENKHQHRHSIYAAEATGLLVMAVLLLVLTIVRYWRYIPWSAR*
Ga0137390_106611881	3300012363	Vadose Zone Soil	MFANEACQRLSTIDYRPPPTDARKGYNSAVNSPAPPKPASDNKHQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0137358_100925071	3300012582	Vadose Zone Soil	PTTDDQTTNDYRPTKGYNNRVSPPVPMKPVADSKRQDNRHRHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWRAR*
Ga0137358_102906382	3300012582	Vadose Zone Soil	MNVCERCLPTTNDYRPTIDARKGYNSRVNSPASPKPASDNKHQHRHSIYAAEASGLLVIAVLLLVLTIIRYWRYIPWSAR*
Ga0137397_113484952	3300012685	Vadose Zone Soil	MNVCETRFANDHRLSTNHYSATTIGERKGYNSAVNSPATPKPASDNKHQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR*
Ga0137396_103891612	3300012918	Vadose Zone Soil	MFAERGQPTTIDQRLSTTIDARKGYNSAVNSPAPPKPASENKHQHRHSIYAAEATGLLVMAVLLLVLTIVRYWRYIPWSAR*
Ga0137396_107975912	3300012918	Vadose Zone Soil	MFAKRGLPTTNDNRLSTNDYSATTIGERKGYNSAVNSPATPKPASDNKHQHRHSIYAAEATGLLVMAVLLLVLTIIRYWQYIPWSAR*
Ga0137416_101557872	3300012927	Vadose Zone Soil	VFAKRGLPTTIDYRPTPIDARKGYNSAVNSPATPKPASDNKHQHRHSIYAAEATGLLVIAVLLLVLTIIRYWRYIPWSAR*
Ga0182018_100043095	3300014489	Palsa	MFANDHRPTTSDRKGYNSRVNAPVPSKPEAHNEHQDNKNQHHLAIHAAEATGLLLMAVLLLILTLIRYWRDIPWSAR*
Ga0182010_100255873	3300014490	Fen	LANDERRTTIDQRTRYNSRVNAPVPPKPAADGEHPDNKHRHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWGAR*
Ga0182010_102232341	3300014490	Fen	MSCSPTTNDRRLTTINPRKVYNSAVNAPVPSKPAADDKHQHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR*
Ga0182014_1000092232	3300014491	Bog	MNFLRATFANDHRRTTIDRRKGYNSRVNAPVPPKPAADREHPDNKHRHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWGAR*
Ga0182011_102548101	3300014496	Fen	MFAKTDDRRLTTEKGYNSGVNAPAPSKPAADDEHPDEKHADHKHKRHHAIYAAEATGLLLMAILLLILTIIRYWRYIPWSAR*
Ga0182019_104803752	3300014498	Fen	LANDERRTTIDQRTRYNSRVNAPVPPKPAADREHPDNKHRHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWGAR*
Ga0182021_108972892	3300014502	Fen	MNFLRATFANDHRRTTIDRRKDYNSRVNAPVPPKPAADREHPDNKHRHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWGAR*
Ga0181536_105219661	3300014638	Bog	VRTTFAADHRLRTIDQRKGYNSRVNSPVPPKPVADREHQDNQHQDNKHQHRHSIYAAEATGLLLMAVLLLVLTIIR
Ga0182030_101482263	3300014838	Bog	MVVSRSSFVVRDECVRTTFAADHRLTTIDQRKGYNSRVNSPVPPKPAADHEHQDNKHQHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWNAR*
Ga0137418_103233372	3300015241	Vadose Zone Soil	MFAKRGLPTTIDYRPTTIGERKGYNSAVNSPASPKPASENKHQHRHSIYAAEATGLLVMAVLLLVLTIVRYWRYIPWSAR*
Ga0187818_100437812	3300017823	Freshwater Sediment	MVVSKGSPKLIANDQRLTTNDRKGYNNGVDDPTPPKPVADNKHQHHHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR
Ga0187803_102185682	3300017934	Freshwater Sediment	MSSRRTTNARRLTTEKGYNDDVGAPVPSKAAADNKHRHRHPVYAAEATGLLVMAVLLLILIVVRYWSYIHWSAR
Ga0187817_106071602	3300017955	Freshwater Sediment	MNCLLTTDDQRLAPEKSYNIRVNSPVPPKPVAVDQHHDGKHQHRHAIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR
Ga0187817_111001242	3300017955	Freshwater Sediment	GPTTIHKRKDYNNAVNAPVPLKPAAHDAHQDSRHQHRHSIYAAEATGLLFMAVLLLVLTLIRYWRDIPWSAR
Ga0187858_107216342	3300018057	Peatland	LFANDQRPTTDDQRPTTEKSYNIGVNAPIRPKPAADLQHQDSPHHHHQAIYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR
Ga0187771_102469703	3300018088	Tropical Peatland	TTDNQRYTPEKSYNIGVNSPVPPKPVADDQHHDGKHQRRHAIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR
Ga0187770_104693131	3300018090	Tropical Peatland	LLTTNDQRHALTTDNQRYTPEKSYNIGVNSPVPPKPVADDQHHDGKHQRRHAIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR
Ga0066662_101317872	3300018468	Grasslands Soil	MNVCEPRFANDHRLSTNDYSATTIGERKGYNSAVNSPATPKPASDNKHQHHHSIYAAEATGLLVIAVLLLVLTIIRYWRYIPWSAR
Ga0193751_10208685	3300019888	Soil	MIAKRGLPTTIDCRPTTIDARKGYNSRVNSPASPKPASDHKDPHRHSIFAAEATGLLVIAVVLLVLTIIRYWRYIPWSAR
Ga0210407_100117155	3300020579	Soil	VFVSGVCHRLSTIDYRPSPIDARKGYNSAVNSPTPPKPASDNKDQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR
Ga0210403_100155102	3300020580	Soil	VFVSGVCHRLSTIDYRPSPIDARKGYNSAVNSPTTPKPASDNKDQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR
Ga0210399_103950702	3300020581	Soil	VFVSGVCHRLSTIDYRPSPTDARKGYNSAVNSPTTPKPASDNKDQHRHSIYAAEATGLLVIAVLLLVLTIIRYWRYIPWSAR
Ga0210405_101321322	3300021171	Soil	MNVCETRLPTTIDQRPTPIDARKGYNSAVNSPAPPKPTSDNKHQHRHSIYAAEATGLLVMAVLLLVLTIVRYWRYIPWSAR
Ga0210402_112326691	3300021478	Soil	MFANDNRLTTNDHTGYNIGVNAPVQPKPAADDKHHDQHEQHHSVYAAEATGLLLMAVLLLILTIVR
Ga0210410_111957921	3300021479	Soil	VFVSGVCHRLSTIDYRPSPTDARKGYNSAVNSPTTPKPASDNKDQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR
Ga0224558_10063013	3300023090	Soil	MVVSRSSFVVRDECVRTTFAADHRLTTIDQRKGYNIRVNSPVPPKPAADHEHQDNKHQHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWNAR
Ga0224558_10428863	3300023090	Soil	MNFLRATFANDHRRTTIDRRKGYNSRVNAPVPPKPAADREHPDNKHRHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWGAR
Ga0208714_10081223	3300025527	Arctic Peat Soil	MFANDVGQRLTTGKGYNTGVNAPVPSKPVADDEHQHDKHQHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR
Ga0208355_11251632	3300025581	Arctic Peat Soil	MAVSKGPRTFIANAHRLTTTDRKGYNSGVNAPTPPKPVADNKHQHHHSIYAAEASGLLLMAVLLLI
Ga0207930_11179501	3300025604	Arctic Peat Soil	NDVGQRLTTGKGYNTGVNAPVPSKPVADDEHQHDKHQHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR
Ga0207926_10219472	3300025619	Arctic Peat Soil	MFANDQRPTTIDRRKGYNSAVDAPVPPKPAADNKHQHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWRAR
Ga0207684_104639062	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VVYTAILANDRRLATTFHRRKGYNSRVNAPVPPKPVADNKHQHRHASYAAEATGLLLVAVLLLILTIIRYWRYIPWNAH
Ga0209471_12768991	3300026318	Soil	SQRPSTNDQRLSTTIDARKGYNSAVNSPATPKPASDNKHQHRHSIYAAEACGLLVMAVLLLVLTIIRYWRYIPWSAR
Ga0209267_11890942	3300026331	Soil	QRPSTNDQRLSTTIDARKGYNSAVNSPATPKPASDNKHQHRHSIYAAEACGLLVMAVLLLVLTIIRYWRYIPWSAR
Ga0209805_12194622	3300026542	Soil	LPNEVSQRPSTNDQRLSTTIDARKGYNSAVNSPATPKPASDNKHQHRHSIYAAEACGLLVMAVLLLVLTIIRYWRYIPWSAR
Ga0209648_1000076615	3300026551	Grasslands Soil	MFASDHRLTTNGRKGYNGAVNSPVPMKPVADNKRQDNQHRHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYTPWSAR
Ga0208983_10985482	3300027381	Forest Soil	MNVCRTRFANDHRLTTNDYQPTIDARKGYNSAVNSPAPPKPASDNKHQHRHSIYAAEATGLLVIAVLLLVLTIIRYWRYIPWSAR
Ga0208043_11341861	3300027570	Peatlands Soil	MNRLLTTDDRRPTTEKGYNSRVNAPIPPKPVADNKHQHHHAIYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR
Ga0209733_10078673	3300027591	Forest Soil	MNVCETRFANDHRLSTNDQRPTTIDARKGYNSRVNPPVSPKPESDNRHQHRHSIYAAEATGLLVIAVLLLVLTIVRYWRYIPWSAR
Ga0208324_10092204	3300027604	Peatlands Soil	LLVDRAVCLLTTFASDCRLTTNDHRLFTDEKTYNSGVNAPVPTKPVADREHQDDKHRHQHRHSIYAAEATGLLFMAVLLLILTVIRYWRYIPWSAR
Ga0209106_11014122	3300027616	Forest Soil	PTTIDHRLSTDDYSPTTIDARKGYNSAVNSPAPPKPAFDNKHQHRHSIYAAEATGLLVIAVLLLVLTIIRYWRYIPWSAR
Ga0208988_11074341	3300027633	Forest Soil	YSPTTIDARKGYNSAVNSPAPPKPASASKHQHRHSIYAAEATGLLVIAVLLLVLTIIRYWRYIPWSAR
Ga0209117_10035473	3300027645	Forest Soil	MKLHQYQLVNSHKNQGRPRATTLHRRKGYNSRVNAPVPPKPAADNKRQHRHAIYAAEATGLLLVAVLLLILTIIRYWRYIPWNAH
Ga0208990_10165501	3300027663	Forest Soil	FAMNVCRTRFANDHRLTTNDQRLSPTTDARKGYNSAVNPTAPPKPASDNKHQHRHSVYAAEATGLLVIAVLLLVLTIIRYWRYIPWSAR
Ga0209118_10444592	3300027674	Forest Soil	LVVSRWSFAVNVCETRFANDHRPTTIDSRKGYNSRVNSPAPPKPASDNKHQHRHSIYAAEATGLLVIAVVLLVLTIIRYWRYIPWSAR
Ga0209448_1000001848	3300027783	Bog Forest Soil	MPANDHRLTTHDRRKGYNSGVNAPVSPKPVADREDQDNKYRHQHRHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR
Ga0209656_101337502	3300027812	Bog Forest Soil	MTNDHRLTTRARKSYNSGVNVPVSSKPTADIQQQDNPHQHRHAIYAAEATGLLVMAVLLLILTIIRYWRYIPWSAR
Ga0209517_1001059813	3300027854	Peatlands Soil	MLANDQRLTTIDRKGYNSGVNAPTPPKPVADSKHQHHHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR
Ga0209693_101628422	3300027855	Soil	FTMKALAADQRPTTNDRKGYNSAVNAPVPSKQPSDDKHQHRHSIYAAEAAGLLLIAVLLLILTIIRYWRNIPWSAR
Ga0209777_102243392	3300027896	Freshwater Lake Sediment	MFAKTDDRRLTTEKGYNSGVNAPAPSKPAADDEHPDEKHADHKHKRHHAIYAAEATGLLLMAILLLILTIIRYWRYIPWSAR
Ga0209048_106512962	3300027902	Freshwater Lake Sediment	LIANDQRLTTDDRKGYNGGVNAPTPPKPVADDKHQHHHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR
Ga0209415_105818062	3300027905	Peatlands Soil	LLVDRAVCLLTTFASDCRLTTNDHRLFTDEKTYNSGVNAPVPTKPVADREHQDDKHRHQHRHSIYAAEATGLLFMAVLLLILTIIRYWRYIPWSAR
Ga0209583_105937891	3300027910	Watersheds	LPTTIDQRLTTEKGYNSAVNSPVQPQPAARDKQHDKHQHHHSIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR
Ga0209698_100004435	3300027911	Watersheds	VIDDRSRRVFGEVVCQRPSSNDHRLTTNDRKGYNSSVNAPATAKPAAGREHRSEHPSEHPDDKHRHRHSIYAAEATGLLLMAILLLILTLIRYWRDIPWSAR
Ga0265326_100174764	3300028558	Rhizosphere	MTCLPTANDKRLTTSAQKSYNIRVNSPMPSRPATGSNHQHRHSIYSAEATGLLLMAVLLLILTIIRYWRYIPWSAR
Ga0265338_102164531	3300028800	Rhizosphere	LLTTNDQRPPNQKGYNSSVNSSVPSKPVAENEAHDKHQHHHSIYAAEASGLLLMAVLLLILTIIRYWQYIPWSAR
Ga0308309_100380133	3300028906	Soil	MKALAADQRPTTNDRKGYNSAVNAPVPSKQPSGDKHQHRHSIYAAEAAGLLLIAVLLLILTIIRYWRNIPWSAR
Ga0170823_124079682	3300031128	Forest Soil	MFASGVCHRLSTIDYRPPPLDARKGYNSAVNSPATPKPASDNKHQHRHSIYAAEATGLLVMAVLLLVLTIIRYWRYIPWSAR
Ga0302325_102197163	3300031234	Palsa	MFANDHRPTTSDRKGYNSRVNAPVPSKPEAHNEHQDNKNQHHLAIHAAEATGLLLMAVLLLILTLIRYWRDIPWSAR
Ga0265339_103882621	3300031249	Rhizosphere	LLTTNDQRPPTQKGYNSSVNSSVPSKPVAENEAHDKHQHHHSIYAAEASGLLLMAVLLLILTIIRYWQYIPWSAR
Ga0307474_100927283	3300031718	Hardwood Forest Soil	MNHLFSASPTLADDQRPATNDQCCSTKGYNSRVNAPVQPKPKTDNKHEHRHPIYSAEATGLLVIAVLLLVLTIIRYWRYIPWSVR
Ga0307475_105712891	3300031754	Hardwood Forest Soil	MVVSRSRFAVRYECLGAEVCQRLSTFDYRPTPTDARKGYNSRVNSPAPPTPGSDNKHQHRHSIYAAEATGLLVIAVVLLVLTIIRYWRYIPWSAR
Ga0307475_111278711	3300031754	Hardwood Forest Soil	LPTTDGRRPPTSDAPRKASRVNAPVQPKPKTDNQHQDNKHEHRHPIYAAEATGLLVIAVLLLVLTIIRYWRYIPWSVR
Ga0307473_106521201	3300031820	Hardwood Forest Soil	DQRLTTNDRKVYNSAVNSPAPPKPVSDNRHRHRHSIYAAEATGLLLMAVLLLVLTLIRYWRYIPWSAR
Ga0311301_119070082	3300032160	Peatlands Soil	MAVSKVPRTFIANGHRLTIDRKGYNSGVNAPTPPKPVADNKHQHHHSIYAAEASGLLLMAVLLLILTIIRYWRYIPW
Ga0307471_1002247474	3300032180	Hardwood Forest Soil	LPAAFAIDYRPSPADARKGYNSAVNSPATPKPASDNKHQHRHSIYAAEATGLLVIAALLLVLTIIRYWRYIPWSAR
Ga0307472_1017464401	3300032205	Hardwood Forest Soil	VFASGVCHRLSTIDYRPSPADARKGYNSAVNSPATPKPASDNKHQHRHSIYAAEATGLLVIAALLLVLTIIRYWRYIPWSAR
Ga0326728_1000473835	3300033402	Peat Soil	MNCLPTTNDYRPTTEKSYNRRVNAPASPKPAADNEHSDNKHKRHHAIYAAEATGLLLMAVLLLILTILRYWRYIPWSAR
Ga0326728_100325936	3300033402	Peat Soil	MCANDVCCDHRLRTIDQRKGYNSRVNSPVPPKPVADHQHQDNKHQHRHSIYAAEATGLLLMAVLLLVLTIIRYWRYIPWSAR
Ga0326727_108227331	3300033405	Peat Soil	MNCLPTTNDYRPTTEKSYNRRVNAPASPKPAADNEHSDNKHKRHHAIYAAEATGLLLMAVLLLIL
Ga0370484_0044807_6_221	3300034125	Untreated Peat Soil	LQTTTDRRLTTEKGYNSRVNAPVRPKPVADHKHQHHHAIYAAEATGLLLMAVLLLILTIIRYWRYIPWSAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070364

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences