Metagenome / Metatranscriptome Family F070371

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070371
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	74 residues
Representative Sequence	MARTIKVYRIADDGRRLASGAFKAASEQDLQLKWELHLATAAGGLYIATHRGVQLGIGLASDAVRHHGGAHG
Number of Associated Samples	93
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	25.20 %
% of genes from short scaffolds (< 2000 bps)	94.31 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.301 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.821 % of family members)
Environment Ontology (ENVO)	Unclassified (22.764 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.780 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 32.00% Coil/Unstructured: 48.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
d.61.1.1: tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase	d1jh6a_	1jh6	0.77553
d.128.1.5: GatB/GatE catalytic domain-like	d2f2ab2	2f2a	0.64479
f.69.1.1: Perfringolysin N-terminal-like	d3hvna3	3hvn	0.63881
b.3.4.0: automated matches	d4q14a_	4q14	0.63239
b.1.1.1: V set domains (antibody variable domain-like)	d5e56a_	5e56	0.62999

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00239	Resolvase	56.91
PF04392	ABC_sub_bind	2.44
PF00589	Phage_integrase	2.44
PF02899	Phage_int_SAM_1	1.63
PF00656	Peptidase_C14	1.63
PF03401	TctC	0.81
PF00873	ACR_tran	0.81
PF12844	HTH_19	0.81
PF07508	Recombinase	0.81
PF01545	Cation_efflux	0.81
PF03779	SPW	0.81
PF07804	HipA_C	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	57.72
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	56.91
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.44
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	1.63
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	1.63
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	1.63
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.81
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.81
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.81
COG3550	Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin module	Signal transduction mechanisms [T]	0.81
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.30 %
Unclassified	root	N/A	18.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.30 %
Unclassified	root	N/A	18.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.30 %
Unclassified	root	N/A	18.70 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.05 %
Unclassified	root	N/A	18.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	69.92 %
Unclassified	root	N/A	18.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	63.41 %
Unclassified	root	N/A	18.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.57 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.25 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.70 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	3.25 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.70 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	3.25 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_102700907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	500	Open in IMG/M
3300004643\|Ga0062591_101002649	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005331\|Ga0070670_101829110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	559	Open in IMG/M
3300005332\|Ga0066388_100858119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1492	Open in IMG/M
3300005332\|Ga0066388_102398486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	957	Open in IMG/M
3300005332\|Ga0066388_103153530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	842	Open in IMG/M
3300005332\|Ga0066388_103584447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	792	Open in IMG/M
3300005332\|Ga0066388_108425309	Not Available	514	Open in IMG/M
3300005356\|Ga0070674_100910208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	767	Open in IMG/M
3300005365\|Ga0070688_100777158	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005367\|Ga0070667_102283782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300005441\|Ga0070700_101113454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	655	Open in IMG/M
3300005466\|Ga0070685_10825738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	685	Open in IMG/M
3300005549\|Ga0070704_101127489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	713	Open in IMG/M
3300005577\|Ga0068857_102551563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	502	Open in IMG/M
3300005719\|Ga0068861_100395726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1225	Open in IMG/M
3300005764\|Ga0066903_100832323	All Organisms → cellular organisms → Bacteria → Proteobacteria	1657	Open in IMG/M
3300005764\|Ga0066903_101594879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1237	Open in IMG/M
3300005764\|Ga0066903_103218758	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300005764\|Ga0066903_104298040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	762	Open in IMG/M
3300005764\|Ga0066903_105457299	Not Available	671	Open in IMG/M
3300005764\|Ga0066903_106462954	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300005764\|Ga0066903_107355310	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300005843\|Ga0068860_101174006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	788	Open in IMG/M
3300006031\|Ga0066651_10381096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	754	Open in IMG/M
3300006031\|Ga0066651_10736390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	531	Open in IMG/M
3300006046\|Ga0066652_100255380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1537	Open in IMG/M
3300006046\|Ga0066652_101209941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	715	Open in IMG/M
3300006046\|Ga0066652_102074600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300006175\|Ga0070712_101577235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	574	Open in IMG/M
3300006581\|Ga0074048_12258796	Not Available	511	Open in IMG/M
3300006844\|Ga0075428_101062783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	856	Open in IMG/M
3300006845\|Ga0075421_100211077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2397	Open in IMG/M
3300006845\|Ga0075421_102079549	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300006847\|Ga0075431_102246290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	500	Open in IMG/M
3300006854\|Ga0075425_100004302	All Organisms → cellular organisms → Bacteria	14666	Open in IMG/M
3300006854\|Ga0075425_101673676	Not Available	716	Open in IMG/M
3300006880\|Ga0075429_100391524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1217	Open in IMG/M
3300007076\|Ga0075435_100013355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6107	Open in IMG/M
3300009094\|Ga0111539_11490796	Not Available	784	Open in IMG/M
3300009094\|Ga0111539_11566692	Not Available	764	Open in IMG/M
3300009094\|Ga0111539_11682334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	736	Open in IMG/M
3300009100\|Ga0075418_10243172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1916	Open in IMG/M
3300009101\|Ga0105247_11416012	Not Available	563	Open in IMG/M
3300009147\|Ga0114129_11274779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	912	Open in IMG/M
3300009148\|Ga0105243_12486172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	557	Open in IMG/M
3300009156\|Ga0111538_11907393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	747	Open in IMG/M
3300009156\|Ga0111538_12668935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300009177\|Ga0105248_11869765	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300009792\|Ga0126374_10478444	Not Available	892	Open in IMG/M
3300009792\|Ga0126374_10885851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	690	Open in IMG/M
3300009802\|Ga0105073_1023909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	669	Open in IMG/M
3300009803\|Ga0105065_1071908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300009814\|Ga0105082_1064615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	640	Open in IMG/M
3300009837\|Ga0105058_1166713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	540	Open in IMG/M
3300010029\|Ga0105074_1123384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300010037\|Ga0126304_10790810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	643	Open in IMG/M
3300010043\|Ga0126380_10509073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	926	Open in IMG/M
3300010046\|Ga0126384_10834666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	827	Open in IMG/M
3300010166\|Ga0126306_10311649	Not Available	1214	Open in IMG/M
3300010166\|Ga0126306_11040236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	668	Open in IMG/M
3300010358\|Ga0126370_10068580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2335	Open in IMG/M
3300010360\|Ga0126372_10402903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1249	Open in IMG/M
3300010362\|Ga0126377_10414445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1361	Open in IMG/M
3300010366\|Ga0126379_10042400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3676	Open in IMG/M
3300010366\|Ga0126379_11662703	Not Available	743	Open in IMG/M
3300010375\|Ga0105239_11955203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	680	Open in IMG/M
3300010398\|Ga0126383_13088950	Not Available	544	Open in IMG/M
3300010403\|Ga0134123_13196567	Not Available	527	Open in IMG/M
3300011439\|Ga0137432_1311115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	503	Open in IMG/M
3300012901\|Ga0157288_10433327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	501	Open in IMG/M
3300012904\|Ga0157282_10075199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	890	Open in IMG/M
3300012910\|Ga0157308_10306232	Not Available	584	Open in IMG/M
3300012912\|Ga0157306_10429649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	524	Open in IMG/M
3300012913\|Ga0157298_10352979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	542	Open in IMG/M
3300012914\|Ga0157297_10223107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	666	Open in IMG/M
3300012955\|Ga0164298_10134834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1363	Open in IMG/M
3300012955\|Ga0164298_10587335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	762	Open in IMG/M
3300012957\|Ga0164303_11463451	Not Available	514	Open in IMG/M
3300012986\|Ga0164304_11058809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	646	Open in IMG/M
3300013306\|Ga0163162_12720871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	569	Open in IMG/M
3300013308\|Ga0157375_11254369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	870	Open in IMG/M
3300014325\|Ga0163163_11825764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	668	Open in IMG/M
3300014326\|Ga0157380_11643552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	699	Open in IMG/M
3300014326\|Ga0157380_13220774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	521	Open in IMG/M
3300014968\|Ga0157379_10707614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	946	Open in IMG/M
3300014968\|Ga0157379_11682204	Not Available	621	Open in IMG/M
3300015077\|Ga0173483_10059416	All Organisms → cellular organisms → Bacteria → Proteobacteria	1489	Open in IMG/M
3300015200\|Ga0173480_10696213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	636	Open in IMG/M
3300015374\|Ga0132255_103832601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300016341\|Ga0182035_10434009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1110	Open in IMG/M
3300016387\|Ga0182040_10485216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	985	Open in IMG/M
3300016404\|Ga0182037_11129841	Not Available	686	Open in IMG/M
3300019361\|Ga0173482_10246231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	759	Open in IMG/M
3300021082\|Ga0210380_10088509	All Organisms → cellular organisms → Bacteria → Proteobacteria	1362	Open in IMG/M
3300025923\|Ga0207681_10609683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	903	Open in IMG/M
3300025925\|Ga0207650_11599780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	553	Open in IMG/M
3300025931\|Ga0207644_10879692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300025941\|Ga0207711_11217880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	694	Open in IMG/M
3300025941\|Ga0207711_11237172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	688	Open in IMG/M
3300025942\|Ga0207689_11535704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	555	Open in IMG/M
3300025961\|Ga0207712_12146716	Not Available	500	Open in IMG/M
3300026035\|Ga0207703_11683739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	610	Open in IMG/M
3300026075\|Ga0207708_11687434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	556	Open in IMG/M
3300026118\|Ga0207675_102290660	Not Available	554	Open in IMG/M
3300027880\|Ga0209481_10203742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	989	Open in IMG/M
3300027909\|Ga0209382_10637178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1155	Open in IMG/M
3300031573\|Ga0310915_10396418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	980	Open in IMG/M
3300031859\|Ga0318527_10315553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	666	Open in IMG/M
3300031890\|Ga0306925_11242208	Not Available	744	Open in IMG/M
3300031890\|Ga0306925_11689572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	611	Open in IMG/M
3300031897\|Ga0318520_10513152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	741	Open in IMG/M
3300031910\|Ga0306923_12338966	Not Available	532	Open in IMG/M
3300031947\|Ga0310909_10265036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1437	Open in IMG/M
3300031954\|Ga0306926_10859398	Not Available	1089	Open in IMG/M
3300031954\|Ga0306926_11244532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	872	Open in IMG/M
3300032059\|Ga0318533_11390256	Not Available	513	Open in IMG/M
3300032076\|Ga0306924_11420503	Not Available	740	Open in IMG/M
3300032261\|Ga0306920_100114177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4006	Open in IMG/M
3300032261\|Ga0306920_100300276	All Organisms → cellular organisms → Bacteria → Proteobacteria	2392	Open in IMG/M
3300032261\|Ga0306920_100756634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1429	Open in IMG/M
3300032261\|Ga0306920_104178448	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300033289\|Ga0310914_11015274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.23%
Host-Associated	Host-Associated	35.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.60%
Plants	Host-Associated → Plants	35.77%
Aquatic	Environmental → Aquatic	1.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.50%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Sediment	Environmental → Aquatic → Sediment	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.58%
Loam	Environmental → Terrestrial → Soil → Loam	14.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.88%
Sand	Environmental → Terrestrial → Soil → Sand	4.06%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.06%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.06%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.25%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009802	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60	Environmental	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1027009071	3300004479	Soil	HQSGEIMARTIKVYRIATDGRRLASGAFKAASEQDLQLKWELHLATAAGGLYIATHRGLQLGIGLASQAVRHYGGAHG*
Ga0062591_1010026492	3300004643	Soil	MARTVKVFRIADDGRRVASGAFKAASETELQLKWELHLATATSGLYIATHRGVQLGIGLAADGAQRNGGAHG*
Ga0070670_1018291102	3300005331	Switchgrass Rhizosphere	VLLLGQRLAAGAIKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHYGGAHG*
Ga0066388_1008581192	3300005332	Tropical Forest Soil	MARTVKVYRIGDDGRRVAAGAFQVTSESDLQAKWELHLATAAGGLYVATHRGIQLGVGLASDAMRPQGGPYG*
Ga0066388_1023984862	3300005332	Tropical Forest Soil	MARTVKVYRIADDGRRVAAGAFQASSESDLQAKWELHLATAVGGLYVATHRGIQLGVGLASDAMRPQGGPYG*
Ga0066388_1031535302	3300005332	Tropical Forest Soil	MSRTIKLYRVSDDGRRVAAGAFQATSESDLQLKWELHLVTAAQGLYIATHRGVQLGIGIASDTVRHQGGHLG*
Ga0066388_1035844471	3300005332	Tropical Forest Soil	MAKTIKLYRIAEDGRRLASGAFQASSESDLQLKWELHLATAAAGLYIATHRGVQLGVGVASDAVRRHGAGHG*
Ga0066388_1084253091	3300005332	Tropical Forest Soil	MARTIKVYRIADDGRRVAAGAFQASSEGDLQAKWELHLATAASGLYIATHRGIQLGVGLASDTMRPRGGPYG*
Ga0070674_1009102082	3300005356	Miscanthus Rhizosphere	VKRQHQSGEIMARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHYGGAHG*
Ga0070688_1007771582	3300005365	Switchgrass Rhizosphere	MARTVKVFRIADDGRRVASGAFKAASETELQLKWELHLATAASGLYIATHRGVQLGIGLAADRAQRYGGAHG*
Ga0070667_1022837822	3300005367	Switchgrass Rhizosphere	MARTVKVFRIADDGRRVASGAFKAASETELQLKWELHLATATSGLYIATHRGVQLGIGLAADRAQRYGGAHG*
Ga0070700_1011134541	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RRLASGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHYGGAHG*
Ga0070685_108257382	3300005466	Switchgrass Rhizosphere	MARTVKLFRIADDGRRVASGAFKVASETELQLKWELHLATAASGLYIATHRGVQLGIGIAADRAQLYGGAHG*
Ga0070704_1011274892	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MARTVKVFRIADDGRRVASGAFKAASETELQLKWELHLATAASGLYIATHRGVQLGIGIAADRAQLYGGAHG*
Ga0068857_1025515632	3300005577	Corn Rhizosphere	LRAPRFASHYLQQSGETMARTVKVFRIADDGRRVASGAFKAASETELQLKWELHLATAASGLYIATHRGVQLGIGLAADRAQRYGGAHG*
Ga0068861_1003957262	3300005719	Switchgrass Rhizosphere	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHYGGAHG*
Ga0066903_1008323231	3300005764	Tropical Forest Soil	VKVYRIADDGRRVAAGAFQASSESDLQAKWELHLATAVGGLYVATHRGIQLGVGLASDAMRHGGPYG*
Ga0066903_1015948793	3300005764	Tropical Forest Soil	MARTVKVYRIADDGRRVAAGAFQASSESDLQAKWELHLATAAGGLYVATHRGIQLGVGLASDAMRPQGGPYG*
Ga0066903_1032187581	3300005764	Tropical Forest Soil	MARTIKLYRIAEDGRRVASGAFRAASESDLQMKWELHLATATSGLYIATHRGVQLGMGVASDAVRPQGRGHG*
Ga0066903_1042980402	3300005764	Tropical Forest Soil	MSRTIKLYRVSDDGRRVAAGAFQATSESDLQLKWELHLVTAAQGLYIATHRGVQLGIGIASDTVGERHG*
Ga0066903_1054572992	3300005764	Tropical Forest Soil	MARTIKLYRVSEDGRRVAAGAFLASSENDLQLKWELHLATAARGLYIATHRGVQLDIGLESDAVQHEIGRHG*
Ga0066903_1064629541	3300005764	Tropical Forest Soil	MARTVKVYRIAEDGRRVAAGAFRVSSESDLQARWELHLATAAGGLYIATHRGIQLGVGLASDAMRPRSGPYG*
Ga0066903_1073553102	3300005764	Tropical Forest Soil	MARMVKVYRIADDGRRIAAGAFRANSESDLQTKWELHLATAAGGLYIATHRGIQLGIGLASDAMRPRGGPYG*
Ga0068860_1011740062	3300005843	Switchgrass Rhizosphere	MARTIKVYRLADDGRRLAAGAIKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHYGGAHG*
Ga0066651_103810962	3300006031	Soil	MARTIKLYRIADDGRRLASGAFKAASETDLQLKWELHLATAAGGLYIATHRGVQLGIGLASEAVRHYGGIHG*
Ga0066651_107363902	3300006031	Soil	LNIECATSRKQQGKSMARTIKLYRVSEDGRRLAAGAFQAASESDLRVKWELHLATAAGGLYIATHRGVQLGVGLASDAVRHQIGRHG*
Ga0066652_1002553802	3300006046	Soil	MARTIKLYRIADDGRRLASGAFKAASEADLQLKWELHLATAVGGLYIATHRGVQLGIGLASDAVRHHGGAHG*
Ga0066652_1012099411	3300006046	Soil	CATSRKQQGKSMARTIKLYRVSEDGRRLAAGAFQAASESDLRVKWELHLATAVGGLYIATHRGVQLGVGLASDAVRHQIGRHG*
Ga0066652_1020746001	3300006046	Soil	TMARTIKVYRIADDGRRVASGAFKAASESDLQFKWELHLATAVGGLYIATHRGVQLGIGLASEAVRHYGGAHG*
Ga0070712_1015772351	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GETMARTVKLFRIADDGRRVASGAFKAASETELQLKWELHLATATSGLYIATHRGVQLGIGLAADGAQRNGGAHG*
Ga0074048_122587961	3300006581	Soil	MARTIKVYRIADDGRRLASGAFKAASEQDLQLKWELHLATAAGGLYIATHRGVQLGIGLASDAVRHHGGAHG*
Ga0075428_1010627832	3300006844	Populus Rhizosphere	MARTIKLYRVSEDGRRLAAGAFQAASETDQQMKWELHLATAVCGLYIATHRGVQLGVGFASDAVPRQIGRHG*
Ga0075421_1002110773	3300006845	Populus Rhizosphere	MARTIKIYRVSEDGRRVAAGAFQATSEGDLQMKWELHLATAVSGLYVATHRGVQLGVGLTSDAVRHQGRGHG*
Ga0075421_1020795492	3300006845	Populus Rhizosphere	QGISMARTIKLYRVSEDGRRVAAGAFQAASESDLQMKWELHLATAVGGLYIATHRGVQLGVGLASDAVRHQGGRYG*
Ga0075431_1022462901	3300006847	Populus Rhizosphere	ARSRNQQGISMARTIKLYRVSEDGRRVAAGAFQAASESDLQMKWELHLATAVGGLYIATHRGVQLGVGLASDAVRHQGGRYG*
Ga0075425_1000043027	3300006854	Populus Rhizosphere	MARTVKVYRIADDGRRVAAGAFQASTESVLQAKWELHLATAAGGLYLATHRGIQLGVGLASDAMRPQGVPFG*
Ga0075425_1016736762	3300006854	Populus Rhizosphere	MARTIKLYRIADDGRRLASGAFKAASETDLQLKWELHLATAAGGLYIATHRGVQLGIGLASDAARHYGGAHD*
Ga0075429_1003915242	3300006880	Populus Rhizosphere	MARTIKIYRVSEDGRRVAAGAFQATSEGDLQMKWELHLATAVSGLYVATHRGVQLGVGLASDAVRHQGRSHG*
Ga0075435_1000133552	3300007076	Populus Rhizosphere	MARTVKVYRIADDGRRVAAGAFQASTESDLQAKWELHLATAAGGLYLATHRGIQLGVGLASDAMRPQGVPYG*
Ga0111539_114907962	3300009094	Populus Rhizosphere	MARTIKLYRVSEDGRRVAAGAFQATSESDLQVKWELHLATAVSGLYVATHRGVQLGVGLASDAVRHQGRGLG*
Ga0111539_115666922	3300009094	Populus Rhizosphere	MPRTIKVYRIADDGRRVAAGAFQATSEVDLSAKWQLHLATAADGLYVATHRGVQLGMGLASEFARREAMRHA*
Ga0111539_116823342	3300009094	Populus Rhizosphere	MINIKRPATPDQQGKSMARTIKLYRVSEDGRRVAAGAFLAASEFDLQMKWELHLATAVGGLYIATHHGVQLGVGLASDAVRHQIGRRG*
Ga0075418_102431722	3300009100	Populus Rhizosphere	VARTIKLYRVSEDGRRVAAGAFQATSESDLQVKWELHLATAVSGLYVATHRGVQLGVGLASDAVRHQGRGLG*
Ga0105247_114160122	3300009101	Switchgrass Rhizosphere	MARTVKVFRIADDGRRVASGAFKAASETELQLKWELHLATAARGLYIATHRGVQLGIGLAADRAQRYGGTHG*
Ga0114129_112747791	3300009147	Populus Rhizosphere	LRIANIKWAIGPDQQGKSVARTIKLYRVSEDGRRVAAGAFQATSESDLQVKWELHLATAVSGLYVATHRGVQLGVGFASDAVPRQIGRHG*
Ga0105243_124861721	3300009148	Miscanthus Rhizosphere	MGNEYRLKHPHQSGEIMARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHNGGAHG*
Ga0111538_119073932	3300009156	Populus Rhizosphere	MARTIKLYRVSEDGRRLAAGAFQAASETDLQMKWELHLATAVNGLYIATHRGVQLGVGLASDAVRHHGRGHG*
Ga0111538_126689352	3300009156	Populus Rhizosphere	MARTIKLYRVSEDGRRVAAGAFQASSESDLQVKWELHLATAVGGLYVATHRGVQLGVGLVSDAVRHQGRGHG*
Ga0105248_118697651	3300009177	Switchgrass Rhizosphere	MARTVKLFRIADDGRRVPSGAFKAASETELQLKWELHLATAASGLYIATHRGVQLGIGLAADRAQRYGGAHA*
Ga0126374_104784442	3300009792	Tropical Forest Soil	MARTIKLYRIAEDGRRVASGAFRAASESDLQMKWELHLATATSGFYIATHRGVQLGMGVASDAVRPQGRGHG*
Ga0126374_108858511	3300009792	Tropical Forest Soil	MINKKCVTSPKDQGEIMSRTIKLYRVSDDGRRVAAGAFQATSESDLQLKWELHLMTAAQGLYIATHRGVQLGIGIASDTARPQGGSLG*
Ga0105073_10239092	3300009802	Groundwater Sand	MARTIKLYRVSEDGRRVAAGAFQAASQHDLQMKWELHLATAVSGLYIATHRGVQLGIGLASDAVRHQGGGHG*
Ga0105065_10719081	3300009803	Groundwater Sand	MARTIKLYRVSEDGRRVAAGAFQVTSESDLQVKWELHLATAVSGLYVATHRGVQLGVGLASDAVRHQGRGHA*
Ga0105082_10646152	3300009814	Groundwater Sand	IKLYRVSEDGRRVAAGAFHASSESDLQVKWELHLATAVGGLYIATHRGVQLGVGLAFDAVRHQGRSHG*
Ga0105058_11667132	3300009837	Groundwater Sand	MARTIKLYRVSEDGRRIAAGAFQATSEYDLQMKWELHLATAVSGLYIATHRGVQLGIGLASDAVRHQGGGHG*
Ga0105074_11233841	3300010029	Groundwater Sand	MINIERPTSRKQQGKAMARTIKLYRVSEDGRRVPAGAFQAASETDLQMKWELHLATAVSGLYIATHRGVQLGIGLASDAVRHQGGGHG*
Ga0126304_107908101	3300010037	Serpentine Soil	RRQPSSINLTLHQEKSMARTIKLYRVSEDGRRVAAGAFQASSENDLQVKWELHLATAVGGLYIATHRGVQLGVGLASDAVRHQGRGHG*
Ga0126380_105090731	3300010043	Tropical Forest Soil	MARTVKVYRIADDGRRVAAGAFQASSESDLQAKWELHLATAVGGLYVATHRGIQLGVGLASDAMRHGGPYG*
Ga0126384_108346662	3300010046	Tropical Forest Soil	MINIKRVSSPKDQGEIMSRTIKLYRVSDDGRRVAAGAFQATSESDLQLKWELHLATAESGLYIATHRGVQLGMGITGAVARPEGGGHG*
Ga0126306_103116492	3300010166	Serpentine Soil	MARTIRLYRVSEDGRRVAAGAFQAASERDLQMKWELHLATAVGSLYIATHRGVQLGVGLASDKTQAAWASS
Ga0126306_110402362	3300010166	Serpentine Soil	LHFLSLQGKSMARTIKLYRVSEDGRRVAPGAFQATSENDLQVKWELHLATAVGGLYIATLGVGLASDAVRHQGRGHG*
Ga0126370_100685802	3300010358	Tropical Forest Soil	MARTVKVYRIADDGRRVAAGAFQASSESDLQAKWELHLATASGGLYVATHRGIQLGVGLASDAMRPQGGPYG*
Ga0126372_104029033	3300010360	Tropical Forest Soil	MARTVKVYRIAEDGRRVAAGASQVSSESDLQAKWELHLATAAGGLYIATHRGIQLGVGLASDAMRPRSGPYGSTI*
Ga0126377_104144452	3300010362	Tropical Forest Soil	MSRTIKVNRVSDDGRRVAAGAFQATSESDLQLKWELHLVTAAQGLYTHRGVQLGIGIASDTVGERHG*
Ga0126379_100424002	3300010366	Tropical Forest Soil	VKVYRIADDGRRVAAGAFQASSESDLQAKWELHLATAAGGLYVATHRGIQLGVGLASDAMRPQGGPYG*
Ga0126379_116627031	3300010366	Tropical Forest Soil	MRKRTIKLYRVSDDGRRVAAGAFQATSESDLQLKWELHLVTAAQGLYVATHRGVQLGIGIASDTARPQGGSLG*
Ga0105239_119552032	3300010375	Corn Rhizosphere	MARTVKLFRIADDGRRVASGAFKAASETELQLKWELHLATAASGLYIATHRGVQLGIGLAAVRAQRYGGAHG*
Ga0126383_130889501	3300010398	Tropical Forest Soil	MSRTIKLYRVSDDGRRVVADAFQATSESDLQLKWELHLVTAAQGLYIATHRGVQLGIGIASDAVRPQGGRRG*
Ga0134123_131965671	3300010403	Terrestrial Soil	MARTVKLFRIADDGRRVASGAFKAASETEPQLKWELHLATAASGLYIATHRGVQLGIGLAADRTRRYGGAHG*
Ga0137432_13111152	3300011439	Soil	KSMARTIKLYRVSEDGRRVASGAFQATSETDLQMKWELHLATAISGLYIATHRGVQLGVGLASDAVRHQGRGHG*
Ga0157288_104333272	3300012901	Soil	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGFASQAVRHYGGAHG*
Ga0157282_100751992	3300012904	Soil	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGVQLGIGLASQAVRHYGGAHG*
Ga0157308_103062321	3300012910	Soil	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAAGGLYIAMHRGVQLGIGLASQAVRHYGGAHG*
Ga0157306_104296492	3300012912	Soil	CAPQESLQRELRTARIPLARTIKLYRVSEDGRRVAAGAFLAASETDLQKKWELPLATAISGLYIPTHRGVQLGVGLASDAVRHRSGRHG*
Ga0157298_103529792	3300012913	Soil	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGVQLGIGLASDAVRHHGGAHG*
Ga0157297_102231071	3300012914	Soil	MARTIKVYRLADDGRRLASGAFKAASEQDLQLKWELHLATAADDLYIATHRGLQLGIGLASQAVRHYGGAHG*
Ga0164298_101348341	3300012955	Soil	MARTIKVYRLADDGRRLASGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHYGGA
Ga0164298_105873352	3300012955	Soil	MARTIKVYRIAEDGRRVASGAFKATSESDLQFKWELHLATAVGGLYIATHRGVQLGIGLASEAVRHYGGAHG*
Ga0164303_114634511	3300012957	Soil	MARTVKLFRIADDGRRVASGAFEVASETELQVKWELHLATAESGLYIATHRGVQLGIGFAANGAHRYGAAHG*
Ga0164304_110588092	3300012986	Soil	MARTVKLFRIADDGRRVASGAFKAASETELQMKWELHLATAASGLYIATHRGVQLGIGLARDRAQHYGGAHG*
Ga0163162_127208711	3300013306	Switchgrass Rhizosphere	VERENMARTIKVYRIADDGRRLASGAFKAASEQDLQLKWELHLATAAGGIYIATHRGVQLGIGLASDADRHHGGAHG*
Ga0157375_112543692	3300013308	Miscanthus Rhizosphere	MSRTVKLFRIADDGRRVASGAFKAASETELQLKWELHLATAASGLYIATHRGVQLGIGLAADRAQRYGGAHG*
Ga0163163_118257642	3300014325	Switchgrass Rhizosphere	SVDLHHQSGEIMARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLVTAADGLYIATHRGLQLGIGLASQAVRHYGGAHG*
Ga0157380_116435522	3300014326	Switchgrass Rhizosphere	MARTIKFYRIADDGRRLASGAFKAASEQDLQLKWELHLATAAGGLYIATHRGVQLGIGLAADRAQRYGGAHG*
Ga0157380_132207742	3300014326	Switchgrass Rhizosphere	MARTIKLYRIADDGRRLASGAFKAASETDLQLKWELHLATAAGGLYLATHRGVQLGIGLASDAARHYGGAHD*
Ga0157379_107076142	3300014968	Switchgrass Rhizosphere	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLAKAADGLYIATHRGLQLGIGLASQAVRHYGGAHG*
Ga0157379_116822042	3300014968	Switchgrass Rhizosphere	MARTIKLYRIADDGRRLASGAFKAASEQDLQLKWELHLATAAGGLYIATHRGVQLGIGLAADRTRRYGGAHG*
Ga0173483_100594161	3300015077	Soil	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAAGGLYIAMHRGVQLGIGLASQAVRHNGGAHG*
Ga0173480_106962132	3300015200	Soil	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLAKAADGLYIATHRGLQLGIGLASQAVRHSGGAHG*
Ga0132255_1038326011	3300015374	Arabidopsis Rhizosphere	SHYLQQSGETMARTVKVFRIADDGRRVASGAFKAASETELQLKWELHLATATSGLYIATHRGVQLGIGLAADGAQRYGGAHG*
Ga0182035_104340091	3300016341	Soil	MARTVKLYKIEADGRRMAAGGFRVNSESDLQAKWALYLATAASGLYIATHRGIQLGIGLASDAMRPRG
Ga0182040_104852162	3300016387	Soil	MRIKRVTSPKDQGEIMSRTIKLYRVSDDGRRVAAGAFQATSESDLQLKWQLHLVTAAQGLYIATHRGVQLGIGIASDTVGERHG
Ga0182037_111298412	3300016404	Soil	VKVYRIADDGRRIAAGAFRASSESDLQTKWELHLATAASGLYVATHRGIQLGVGIASDAMRPRGGPYG
Ga0173482_102462312	3300019361	Soil	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHNGGAHG
Ga0210380_100885093	3300021082	Groundwater Sediment	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHYGGAHG
Ga0207681_106096832	3300025923	Switchgrass Rhizosphere	DDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHYGRAH
Ga0207650_115997801	3300025925	Switchgrass Rhizosphere	SHYLQQSGETMARTVKVFRIADDGRRVASGAFKAASETELQLKWELHLATATSGLYIATHRGVQLGIGLAADGAQRNGGAHG
Ga0207644_108796922	3300025931	Switchgrass Rhizosphere	MARTINVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAASGLYVATHRGVQLGIGLAADRAQRYGGAHG
Ga0207711_112178802	3300025941	Switchgrass Rhizosphere	DGRRVASGAFKVASETELQLKWELHLATAASGLYIATHRGVQLGIGIAADRAQLYGGAHG
Ga0207711_112371721	3300025941	Switchgrass Rhizosphere	MARTVKLFRIADDGRRVPSGAFKAASETELQLKWELHLATAASGLYIATHRGVQLGIGLAADRAQRYGGAHA
Ga0207689_115357041	3300025942	Miscanthus Rhizosphere	MARTVKVFRIADDGRRVASGAFKAASETELQLKWELHLATATSGLYIATHRGVQLGIGLAADGAQRNGGAHG
Ga0207712_121467161	3300025961	Switchgrass Rhizosphere	MARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHYG
Ga0207703_116837392	3300026035	Switchgrass Rhizosphere	TMARTVKVFRIADDGRRVASGAFKAASETELQLKWELHLATAASGLYIATHRGVQLGIGIAADRAQLYGGAHG
Ga0207708_116874342	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	SGEIMARTIKVYRLADDGRRLAAGAFKAASEQDLQLKWELHLATAADGLYIATHRGLQLGIGLASQAVRHYGRAHG
Ga0207675_1022906601	3300026118	Switchgrass Rhizosphere	VKLFRIADDGRRVASGAFKAASETELQLKWELHLATATSGLYIATHRGVQLGIGLAADRAQRYGGAHG
Ga0209481_102037422	3300027880	Populus Rhizosphere	MARTIKLYRVSEDGRRLAAGAFQAASETDQQMKWELHLATAVCGLYIATHRGVQLGVGFASDAVPRQIGRHG
Ga0209382_106371782	3300027909	Populus Rhizosphere	MARTIKIYRVSEDGRRVAAGAFQATSEGDLQMKWELHLATAVSGLYVATHRGVQLGVGLTSDAVRHQGRGHG
Ga0310915_103964182	3300031573	Soil	MARTVKLYKIEADGRRMAAGAFRVNSESDLQAKWELYLATAASGLYIATHRGIQLGIGLASDAMRPRGGPYG
Ga0318527_103155532	3300031859	Soil	MARTVKLYKIEADGRRMAAGAFRVNSESDLQAKWELYLATAASGLYIATHRGIQLGIGLASDVMRPRGGTYG
Ga0306925_112422082	3300031890	Soil	MARTVKLYKIETDGRRMAACAFRVSSESDLQAKWELYLATAASGLYIATHRGIQLGIGLASDVMRPRGGTYG
Ga0306925_116895722	3300031890	Soil	MARTVKLYKIEADGRRMAAGAFRVNSESDLQAKWELYLATAASGLYIATHRGIQLGIGLASDAMRPRG
Ga0318520_105131522	3300031897	Soil	IMSRTIKLYRVSDDGRRVAAGAFQATSESDLQLKWELHLVTAAQGLYIATHRGVQLGIGIASDTVGERHG
Ga0306923_123389662	3300031910	Soil	MSRTIKLYRVSDDGRRVAAGAFQATSESDLQLKWELHLVTAAQGLYIATHRGVQLGIGIASDTVGERHG
Ga0310909_102650361	3300031947	Soil	RTVKLYKIEADGRRMAAGAFRVNSESDLQAKWELYLATAASGLYIATHRGIQLGIGLASDAMRPRG
Ga0306926_108593981	3300031954	Soil	MARTVKLYKIETDGRRMAAGAFRVNSESDLQAKWELYLATAASGLYIATHRGIQLGIGLASDAMRPRGGPYG
Ga0306926_112445322	3300031954	Soil	MSRTIKLYRVSDDGRRVAAGAFQATSESDLQLKWELHLVTAAQGLYIATHRGVQLGIGVASDTVRHQGGRHG
Ga0318533_113902561	3300032059	Soil	MARTVKVYRISDDGQRVAAGAFRVNSESDLQTKWELHLATAGSGLYIATHRGIQLGVGLAILARRRSSRGM
Ga0306924_114205032	3300032076	Soil	MSRTIKLYRVSDDGRRVAAGAFQATSESDLKLKWQLHLVTAAQGLYIATHRGVQLGIGIASDAVGERHG
Ga0306920_1001141778	3300032261	Soil	MARTVKLYKIETDGRRMAAGAFRVSSESDLQAKWELYLATAASGLYIATHRGIQLGIGLASDVMRPRGGTYG
Ga0306920_1003002764	3300032261	Soil	MARTIKLYRIAEDGRRLASGAFRAVSEADLRVKWELHLATVAAGLYIATHRGVQLGMGVASDAVRQRGGGHG
Ga0306920_1007566343	3300032261	Soil	MRIKRVTSPKDQGEIMSRTIKLYRVSDDGRRVAAGAFQATSESDLQLKWELHLVTAAQGLYIATHRGVQLGIGIASDTVGERHG
Ga0306920_1041784481	3300032261	Soil	MARTVKVYRIAEDGRRVAAGAFRVSSESDLQARWELHLATAAGGLYIATHRGIQLGVGLASDAMRPRSGPYG
Ga0310914_110152742	3300033289	Soil	MARTVKVYRIADDGRRLAAGAFQASSESDLQAKWELHLATAAGGLYVATHRGIQLGVGLASDAMRPQGGPYG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070371

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences