Basic Information | |
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Family ID | F070392 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 123 |
Average Sequence Length | 48 residues |
Representative Sequence | DEDVLKMVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Number of Associated Samples | 107 |
Number of Associated Scaffolds | 123 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.81 % |
% of genes from short scaffolds (< 2000 bps) | 0.81 % |
Associated GOLD sequencing projects | 97 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.18 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (99.187 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.886 % of family members) |
Environment Ontology (ENVO) | Unclassified (25.203 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (57.724 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 9.59% β-sheet: 8.22% Coil/Unstructured: 82.19% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.18 |
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Pfam ID | Name | % Frequency in 123 Family Scaffolds |
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PF01687 | Flavokinase | 43.90 |
PF06574 | FAD_syn | 28.46 |
PF12706 | Lactamase_B_2 | 6.50 |
PF07690 | MFS_1 | 1.63 |
PF14534 | DUF4440 | 1.63 |
PF02738 | MoCoBD_1 | 1.63 |
PF08238 | Sel1 | 0.81 |
PF03544 | TonB_C | 0.81 |
PF08669 | GCV_T_C | 0.81 |
PF12849 | PBP_like_2 | 0.81 |
PF05222 | AlaDh_PNT_N | 0.81 |
PF08899 | DUF1844 | 0.81 |
PF01862 | PvlArgDC | 0.81 |
COG ID | Name | Functional Category | % Frequency in 123 Family Scaffolds |
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COG0196 | FAD synthase | Coenzyme transport and metabolism [H] | 72.36 |
COG0810 | Periplasmic protein TonB, links inner and outer membranes | Cell wall/membrane/envelope biogenesis [M] | 0.81 |
COG1945 | Pyruvoyl-dependent arginine decarboxylase | Amino acid transport and metabolism [E] | 0.81 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 99.19 % |
All Organisms | root | All Organisms | 0.81 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300005541|Ga0070733_10111916 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter | 1750 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 17.89% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 8.94% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 8.13% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 6.50% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 5.69% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 4.88% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 4.06% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 4.06% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 4.06% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.25% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 3.25% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.25% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 3.25% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 2.44% |
Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 2.44% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 1.63% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.63% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.63% |
Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 1.63% |
Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 1.63% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 0.81% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.81% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.81% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.81% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.81% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.81% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.81% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.81% |
Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland | 0.81% |
Bog | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog | 0.81% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.81% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.81% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001356 | Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 | Environmental | Open in IMG/M |
3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300004081 | Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2) | Environmental | Open in IMG/M |
3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
3300004091 | Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004635 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005538 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 | Environmental | Open in IMG/M |
3300005541 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 | Environmental | Open in IMG/M |
3300005569 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 | Environmental | Open in IMG/M |
3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
3300005712 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 | Environmental | Open in IMG/M |
3300006052 | Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013 | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009524 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG | Environmental | Open in IMG/M |
3300009635 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 | Environmental | Open in IMG/M |
3300010337 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
3300012357 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012532 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG | Environmental | Open in IMG/M |
3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300014155 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG | Environmental | Open in IMG/M |
3300014169 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG | Environmental | Open in IMG/M |
3300017924 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5 | Environmental | Open in IMG/M |
3300017932 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4 | Environmental | Open in IMG/M |
3300017933 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1 | Environmental | Open in IMG/M |
3300017942 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3 | Environmental | Open in IMG/M |
3300017943 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4 | Environmental | Open in IMG/M |
3300017947 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG | Environmental | Open in IMG/M |
3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
3300017970 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300017996 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40 | Environmental | Open in IMG/M |
3300017999 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG | Environmental | Open in IMG/M |
3300018034 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10 | Environmental | Open in IMG/M |
3300018037 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10 | Environmental | Open in IMG/M |
3300018038 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10 | Environmental | Open in IMG/M |
3300018042 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10 | Environmental | Open in IMG/M |
3300018047 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10 | Environmental | Open in IMG/M |
3300018062 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300018086 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG | Environmental | Open in IMG/M |
3300019787 | Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction) | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
3300021046 | Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
3300021402 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O | Environmental | Open in IMG/M |
3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300024288 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal | Environmental | Open in IMG/M |
3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027097 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF019 (SPAdes) | Environmental | Open in IMG/M |
3300027783 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes) | Environmental | Open in IMG/M |
3300027824 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes) | Environmental | Open in IMG/M |
3300027854 | Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes) | Environmental | Open in IMG/M |
3300027855 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes) | Environmental | Open in IMG/M |
3300027867 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027869 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
3300028023 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 | Host-Associated | Open in IMG/M |
3300028882 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3 | Environmental | Open in IMG/M |
3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
3300029883 | I_Bog_E2 coassembly | Environmental | Open in IMG/M |
3300029986 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1 | Environmental | Open in IMG/M |
3300030056 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3 | Environmental | Open in IMG/M |
3300030503 | III_Palsa_E3 coassembly | Environmental | Open in IMG/M |
3300030509 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2 | Environmental | Open in IMG/M |
3300030760 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030813 | Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031718 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032829 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3 | Environmental | Open in IMG/M |
3300032897 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5 | Environmental | Open in IMG/M |
3300033004 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4 | Environmental | Open in IMG/M |
3300033808 | Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20 | Environmental | Open in IMG/M |
3300033829 | Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5 | Environmental | Open in IMG/M |
3300033888 | Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1 | Environmental | Open in IMG/M |
3300034163 | Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12269J14319_102324832 | 3300001356 | Peatlands Soil | LKLVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH* |
C688J35102_1185597812 | 3300002568 | Soil | SDEDLLNYVKSAPGAVGLVDVRSVNDHVNIVRVDGKVPMEEGYLPH* |
Ga0062385_108015822 | 3300004080 | Bog Forest Soil | DSEMKAFLVAHKDAVTLADSDADVLRIVETMPGALGLVGVRSINDQVNVLRVGGKLPMEDGYLSH* |
Ga0063454_1010646812 | 3300004081 | Soil | DVLKYVQSAPGAVGLVDVRSLNDHVNIVRVGGKVPMEDGYLPH* |
Ga0062384_1005981942 | 3300004082 | Bog Forest Soil | DADADVLHLVETTPGAIGLVDVRSINDQVNVLKVGGKLPMEEGYLPH* |
Ga0062384_1006553861 | 3300004082 | Bog Forest Soil | FLVAHKDAVTLADSDADVLRIVETMPGALGLVGVRSINDQVNVLRVGGKLPMEDGYLSH* |
Ga0062387_1003015731 | 3300004091 | Bog Forest Soil | DSDADVIKIVQSNPGAIGLVEFRSIDNTINVVRVDGKLPMESGYLPH* |
Ga0062389_1013900542 | 3300004092 | Bog Forest Soil | AHQGSITTVDSDEDVLKVVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH* |
Ga0062388_1005999422 | 3300004635 | Bog Forest Soil | HLTHMSDSEMKAFLVAHKDAVTLADSDADVLRIVETMPGALGLVGVRSINDQVNVLRVGGKLPMEDGYLSH* |
Ga0070714_1024263571 | 3300005435 | Agricultural Soil | EDVLKYVQNAPAAVGLVDVRSVNDHVNIIRVDGKVPMEEGYLPH* |
Ga0070713_1003634673 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | DEDVLKYVENTPGAVGLVDVRSVNDHVTIVRVDGKVPMEEGYLPH* |
Ga0070731_105602961 | 3300005538 | Surface Soil | HVIQTTPGTVGLVEVHSINDQVNVLKVGGKLPMEAGYLPH* |
Ga0070733_101119161 | 3300005541 | Surface Soil | EGAIGLVDVRSINDQVNVVRVDGKLPMEDGYLPH* |
Ga0070733_105599482 | 3300005541 | Surface Soil | MIADSDADVLKIVQSIPGAVGLVDVRSVDNSITVVRVGGKLPMESGYLPH* |
Ga0066705_100250981 | 3300005569 | Soil | SVKLVDSDDEVLTYVASTPGAVGLVDVRSVNDRVTIVRVDGKVPMEDGYLPH* |
Ga0070763_105821552 | 3300005610 | Soil | DADALKIVQSTPGAIGLVDVRSVDNTINVVRVDGKLPMESGYLPH* |
Ga0070764_1000202810 | 3300005712 | Soil | MADSDADVLKIVQTTPGAIGLVDVRSVDNTINVVRVDGKLPMESGYLPH* |
Ga0075029_1010035322 | 3300006052 | Watersheds | SDADVLKAVSSVPGSIGMVDVRSVDGSIKVVRVDNKLPMESGYLPH* |
Ga0070712_1007216131 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | TTPGAVGLVDVRAVNDKVKVLHVDGKLPMEEGYLPH* |
Ga0070765_1001866521 | 3300006176 | Soil | SDADVLRIVETMPGALGLVGVRSINDQVNVLRVGGKLPMEDGYLSH* |
Ga0070765_1015082961 | 3300006176 | Soil | ADSDAEVLKIVQSIPGAIGLVDVRSVDNTINVVRVDGKLPMESGYLPH* |
Ga0070765_1015193771 | 3300006176 | Soil | DSDADVLKIVQSTPGAIGFVDVRSVDNTINVVRVDGKLPMESGYLPH* |
Ga0079221_111053582 | 3300006804 | Agricultural Soil | YVENTPGAIGLVDVRSVTDHVNIVRVDGKVPMEEGYLPH* |
Ga0099828_106277082 | 3300009089 | Vadose Zone Soil | LVDSDQDVLAIVESTPGAVGLVDVRSVTDRVRIVHVDGKLPMEDGYLPH* |
Ga0066709_1025138551 | 3300009137 | Grasslands Soil | IVDSDDEVLTLVESVPGAVGLVDVRSVNGRVTIVRVDGKVPMEDGYLPH* |
Ga0066709_1032078241 | 3300009137 | Grasslands Soil | STPGAVGLVDVRSVNGRVTIVRVDGKVPMEDGYLPH* |
Ga0116225_12806931 | 3300009524 | Peatlands Soil | DLLRFVQETPGAVGLVDVRSINDQVNVLRVGGKLPMEDGYLPH* |
Ga0116117_10573811 | 3300009635 | Peatland | PGAVGLVDVRAVDGTINVVRVDGKLPMESGYLPH* |
Ga0134062_102892572 | 3300010337 | Grasslands Soil | VPGAVGLVDVRSVNGRVTIVRVDGKVPMEDGYLPH* |
Ga0126372_115934542 | 3300010360 | Tropical Forest Soil | ESRPGALGLVDFHAIHDKSVQVLKVDGKLPLDQGYLPH* |
Ga0137383_107909791 | 3300012199 | Vadose Zone Soil | RDSLKLVDSDQDVLAIVESTPGAVGLVDVRSVTDRVKIVHVDGKLPMEDGYLPH* |
Ga0137362_114151402 | 3300012205 | Vadose Zone Soil | VESVPGAVGLVDVRSVNGRVTIVRVDGKVPMEDGYLPH* |
Ga0137378_107681432 | 3300012210 | Vadose Zone Soil | DVLAIVESTPGAVGLVDVRSVTDRVKIVHVDGKLPMEDGYLPH* |
Ga0137378_118430581 | 3300012210 | Vadose Zone Soil | EEVLAFVESTPGAVGLIDVRSVTDRITVVRVDGKVPMEDGYLPH* |
Ga0137384_104443122 | 3300012357 | Vadose Zone Soil | VKLVDSDDEVLTYVQSTPGAVGLVDVRSVTDRVNIIRVDGKVPMEDGYLPH* |
Ga0137384_112863732 | 3300012357 | Vadose Zone Soil | PGAVGLIDVRSVTDRITVVRVDGKVPMEDGYLPH* |
Ga0137390_110008592 | 3300012363 | Vadose Zone Soil | VKILDSDDEVLTYVESTPGAIGLVDVRTVTNRVNIVRVDGKVPMEEGYLPH* |
Ga0137373_103883542 | 3300012532 | Vadose Zone Soil | VDSDDEVLTLVESVPGAVGLVDVRSVNGRVAIVRVDGKVPMEDGYLPH* |
Ga0137416_111036592 | 3300012927 | Vadose Zone Soil | IEHRDSLKLVDSDEDVLSIVESLPGAVGLVEVRSVTDRVKIVHVDGKLPMEDGYLPH* |
Ga0181524_102061862 | 3300014155 | Bog | QGLITTVDSDEDVLRLVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH* |
Ga0181531_105020231 | 3300014169 | Bog | VDSDEDVLKVVETMPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH* |
Ga0187820_11098831 | 3300017924 | Freshwater Sediment | LSCTRIPAAHQASITTVDSDEDVLKLVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0187814_104118402 | 3300017932 | Freshwater Sediment | MVDSDADVLHLVETTPGAVGLVDVRSINDQVNVLKVGGKLPMEDGYLPH |
Ga0187801_102808792 | 3300017933 | Freshwater Sediment | ITTVDSDEDVLKLVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0187808_102355252 | 3300017942 | Freshwater Sediment | VDSDAEVLRLVEATPGAVGLVEVRSIDDQVNVLKVDGKLPMEAGYLPH |
Ga0187819_108502842 | 3300017943 | Freshwater Sediment | TTVDSDEDVLKLVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0187785_100316483 | 3300017947 | Tropical Peatland | TSHQDAFTIVDSDTDVLHAVETTPGAIGLVDVRSINDQVNVLKVGGKLPMEDGYLPH |
Ga0187779_106073122 | 3300017959 | Tropical Peatland | SHQDTFTMVDSDADVLHAVEATPGAIGLVDVRSINDKVNVLKVGGKLPMEDGYLPH |
Ga0187783_103999332 | 3300017970 | Tropical Peatland | AAADSDADVLRLVQSNPGAIGLVELHSVDNSINVVRVDGKLPMESGYLPH |
Ga0187783_107631191 | 3300017970 | Tropical Peatland | DADVLKIVQNTPGAVGLVDVRAVDATINVVRVDGKLPMESGYLPH |
Ga0187891_12504972 | 3300017996 | Peatland | IQMVDSDADVLKIVQSTPGAIGLVDVRSVDNTINVVRVDGKLPMESGYLPH |
Ga0187767_102346981 | 3300017999 | Tropical Peatland | DVLHAVETTPGAIGLVDVRSINDQVNVLKVGGKLPMEDGYLPH |
Ga0187863_104392231 | 3300018034 | Peatland | GSITMVDSDEDVLKVVEPMPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0187883_103015752 | 3300018037 | Peatland | DSDADVLKRVQSTPGAVGVVDVRSVDSTIKVVRVDGKLPMESGYLPH |
Ga0187855_105543491 | 3300018038 | Peatland | IADSDAEVLKIVQTTPGAIGLVEFRSIDNTINVVRVDGKLPEESGYLPH |
Ga0187871_102483431 | 3300018042 | Peatland | DALTLADSDADVLHIVETTPGAVGLVGVRSINDQVNVLRVGGKLPMEDGYLSH |
Ga0187859_102088852 | 3300018047 | Peatland | STPGAIGLVDVRSVDNTINVIRVDGKLPMESGYLPH |
Ga0187784_109632062 | 3300018062 | Tropical Peatland | VLVDSDADVLKLVQSMPGAVGLVELHSVDNSINVVRVDGKLPMESGYLPH |
Ga0187769_114113941 | 3300018086 | Tropical Peatland | IASHKESFMFVDSDADVLRFVETTPGALGLVEVRSIDDQVNVLKVDGKLPMEAGYLPH |
Ga0182031_11188981 | 3300019787 | Bog | SIQLVDSDADVLKIVQSTPGAVGFVDVRSVDNTINVVRVDGKLPMESGYLPH |
Ga0210407_110383632 | 3300020579 | Soil | DSDAEVLKIVQSTPGAIGFVDVRSIDNTINVVRVDGKLPMESGYLPH |
Ga0210403_112461151 | 3300020580 | Soil | TMPGAVGLVDVRSINDQVNVVRVEGKLPMEDGYLPH |
Ga0210399_100908774 | 3300020581 | Soil | DEDVLKMVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0210399_113212132 | 3300020581 | Soil | DSIVMADSDADVLKIVQTTPGAIGLVDVRSVDNTINVVRVDGKLPMESGYLPH |
Ga0210395_111354242 | 3300020582 | Soil | QASITTVDSDEDVLKVVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0210401_111339371 | 3300020583 | Soil | QSTPGAVGFVDVRSVDNTINVVRVDGKLPMESGYLPH |
Ga0215015_107036581 | 3300021046 | Soil | VANTPGAVGLVDVRSVTDRVSIVRVDGKVPMEDGYLPH |
Ga0210404_106935912 | 3300021088 | Soil | SDADVLKIVQTTPGAIGLVDVRSVDNTINVVRVDGKLPMESGYLPH |
Ga0210405_110074062 | 3300021171 | Soil | SITTVDSDEDVLKVVETTPGTVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0210396_114895991 | 3300021180 | Soil | LKSFIAAHQGSITLVDSDEDVLKVVETMPGAVGLVDVRSINDQINVVRVDGKLPMEDGYLPH |
Ga0210385_112062081 | 3300021402 | Soil | VETMPGAVGLVDVRSINDQINVVRVDGKLPMEDGYLPH |
Ga0210386_109788121 | 3300021406 | Soil | TVDSDEDVLKMVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0210394_102028991 | 3300021420 | Soil | HQGSITMVDSDEDVLKVVETMPGAVGLIDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0210394_103103573 | 3300021420 | Soil | ASHQDALTLADSDAEVLRIVETTPGAMGLVDVRSINDQVTVLKVGGKLPMEDGYLSH |
Ga0210394_110543892 | 3300021420 | Soil | VVETMPGAVGLVDVRSINDQINVVRVDGKLPMEDGYLPH |
Ga0210394_114096101 | 3300021420 | Soil | VMADSDADVIKIVQSTPGAIGLVEFRSIDNTINVVRVDGKLPEESGYLPH |
Ga0210394_117865011 | 3300021420 | Soil | AQSELKAFVASHKDVLTLADSDAEVLRIVETTPGAMGLVDVRSINDQVTVLKVGGKLPMEDGYLSH |
Ga0210384_107036852 | 3300021432 | Soil | EDVLKIVETVPGAMGLVDVRSINDQINVVRVDGKLPMEAGYLPH |
Ga0210391_108113592 | 3300021433 | Soil | DEDVLKVVETMPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0210390_108726091 | 3300021474 | Soil | HQGSITLVDSDEEVLKVVETMPGAVGLVDVRSITDQINVVRVDGKLPMEDGYLPH |
Ga0210398_109755061 | 3300021477 | Soil | GSITMVDSDEDVLKVVETMPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0210402_102833883 | 3300021478 | Soil | GSITTVDSDEDVLKVVETMPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0210409_116810952 | 3300021559 | Soil | KVVETMPGAVGLVDVRSINDQINVVRVDGKLPMEDGYLPH |
Ga0179589_105767401 | 3300024288 | Vadose Zone Soil | SDADVLKAGESTSGAIGLVDVRSVDGNIKVVKVGGKLPTEAGYLPH |
Ga0207693_104683112 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | VSSDQEMLTVVETTPGAVGLVDVRAVNDKVKVLHVDGKLPMEEGYLPH |
Ga0207700_106123591 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | TPGAVGLVEVRSVTDRVTVIRVDGKVPMEAGYLPH |
Ga0207664_119569661 | 3300025929 | Agricultural Soil | EDVLKYVQNAPAAVGLVDVRSVNDHVNIIRVDGKVPMEEGYLPH |
Ga0208861_1094942 | 3300027097 | Forest Soil | TPGAVGLVGVRSINDQVNVLRVGGKLPMEDGYLSH |
Ga0209448_102657322 | 3300027783 | Bog Forest Soil | EVLKIVQSIPGAIGLVDVRSVDNTINVVRVDGKLPMESGYLPH |
Ga0209040_100350285 | 3300027824 | Bog Forest Soil | LRIVQSTPGAIGLVDVRSVDNTINVIRVDGKLPMESGYLPH |
Ga0209517_107044242 | 3300027854 | Peatlands Soil | TVDSDEDVLKLVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0209693_103998672 | 3300027855 | Soil | DADALKIVQSTPGAIGLVDVRSVDNTINVVRVDGKLPMESGYLPH |
Ga0209167_106774221 | 3300027867 | Surface Soil | EDVLKMVETTPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0209579_101238591 | 3300027869 | Surface Soil | VLKIVQAVPGAIGFIDVRSIDNSINVVRVDGKLPMESGYLPH |
Ga0209275_101529061 | 3300027884 | Soil | SISLVDSDEDVLKVVETMPGAVGLVDVRSINDQINVVRVDGKLPMEDGYLPH |
Ga0209275_106388661 | 3300027884 | Soil | EDVLKVVETMPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0265357_10372671 | 3300028023 | Rhizosphere | IAVHQGSISLVDSDEDVLKVVETMPGAVGLVDVRSINDQINVIRVDGKLPMEDGYLPH |
Ga0302154_102407071 | 3300028882 | Bog | SIQIADSDADVLKIVQSTPGAIGLVDVRSVDGSINVIRVDGKLPMETGYLPH |
Ga0308309_101501751 | 3300028906 | Soil | SDADVLRIVETMPGALGLVGVRSINDQVNVLRVGGKLPMEDGYLSH |
Ga0308309_109170072 | 3300028906 | Soil | SDADVVKQVESTPGAVGLVEVHSVSGGVNVVRVHGKLPMETGYLPH |
Ga0311327_105876561 | 3300029883 | Bog | VDSDADVLKIVQSTPGAVGFVDVRSVDNTINVVRVDGKLPMESGYLPH |
Ga0302188_101489621 | 3300029986 | Bog | STPGAIGLVDVRSVDGSINVIRVDGKLPMETGYLPH |
Ga0302181_102493271 | 3300030056 | Palsa | TSILLVDADEDVLKAVRSMPGAIGMIEVHAVDNTINVVRVDGKLPMQSGYLPH |
Ga0311370_120301032 | 3300030503 | Palsa | ADEDVLKAVRSMPGAIGMIEVHAVDNTINVVRVDGKLPMQSGYLPH |
Ga0302183_101868301 | 3300030509 | Palsa | MADSDADVLKLVQSTPGAVGLVEIHSIDNTVTVVRVDGKLPMESGYLPH |
Ga0265762_11363742 | 3300030760 | Soil | SSELKSFIAAHQGSITMVDSDEDVLKVVETMPGAVGLVDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0265750_10453402 | 3300030813 | Soil | DVLKIVQSNPGAIGFVDVRSVDNTINVVRVDGKLPMESGYLPH |
Ga0302326_114128081 | 3300031525 | Palsa | VLKIVQSTSGAVGLVDVRSVDNSINVVRVDGKLPMESGYLPH |
Ga0310686_1144216111 | 3300031708 | Soil | FIAAHQGSITLVDSDEDVLKVVETMPGAVGLVDVRSINDQINVVRVDGKLPMEDGYLPH |
Ga0307474_100571895 | 3300031718 | Hardwood Forest Soil | FVESTPGALGLVDVRSINDQVRVLKVDGKLPMEDGYLPH |
Ga0307468_1007348802 | 3300031740 | Hardwood Forest Soil | THMSESEWKAFVSSHKDAVTWVDSDAQVLQIVETVQGAVGFVDVRSINDHVSVLKVGGKLPMEEGYLSH |
Ga0307477_100391186 | 3300031753 | Hardwood Forest Soil | ELKSFIATHQGSITAVDSDDDVLRLVETTPGAVGLIDVRSINDQVNVVRVDGKLPMEDGYLPH |
Ga0306925_110686431 | 3300031890 | Soil | DANVLKIVQTTAGAIGLVDVRAVDGTVNVVRVDGKLPMESGYLPH |
Ga0307471_1008625233 | 3300032180 | Hardwood Forest Soil | EVLKLVQSTPGAVGFVDVRSVDNTINVVRVDGKLPMESGYLPH |
Ga0307472_1014952311 | 3300032205 | Hardwood Forest Soil | IAAHQGSITLVDSDEDVLKVVETMPGAVGLVDVRSINDQVKVVRVDGKLPMEDGYLPH |
Ga0335070_119478531 | 3300032829 | Soil | MSRTQMHAFIASHKDAFVLVDSDSDVLRTVEAIPGALGLVSVSSINDQVRVVKVGGKLPMEEGYLPH |
Ga0335071_103646751 | 3300032897 | Soil | IDSHKDSFVVVDSDSEVLRTVEAIPGAIGLIGVSSINDRVRVVKVGGKLPMEQGYLPH |
Ga0335071_103688751 | 3300032897 | Soil | LRVVESTPGAVGLVDVRSITDQVNVLKVGGKLPMEQGYLPH |
Ga0335084_108157031 | 3300033004 | Soil | SEWRAFVTAHNDAVTWAASDAEVLRIVEKLPGAVGFVDVRSINDHVSILRVGGKLPMEDGYLSH |
Ga0314867_075392_21_170 | 3300033808 | Peatland | MGDSDDDVLKAVENTPGAIGLVDVRSINDQVNVLKVDGKLPHEAGYLPH |
Ga0334854_065358_16_165 | 3300033829 | Soil | MADSDADVLKIVQSTSGAVGLVDVRSVDNSINVVRVDGKLPMESGYLPH |
Ga0334792_059118_974_1126 | 3300033888 | Soil | MLVDTDADVLKIVQSIPGAIGFVDVRSIDSTISVVRVDGKLPMESGYLPH |
Ga0370515_0455818_420_539 | 3300034163 | Untreated Peat Soil | IVQSTPGAIGLVDVRSVDNTINVVRVDGKLPMESGYLPH |
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