Metagenome Family F070500

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070500
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	77 residues
Representative Sequence	MMTLRNMRENGVRSLAVTCGAVWCNHQAVLDVNAFADDVVVPSFGPRMVCTVCGAIGADARPNWNERAPACLFGIHP
Number of Associated Samples	89
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	33.88 %
% of genes near scaffold ends (potentially truncated)	21.95 %
% of genes from short scaffolds (< 2000 bps)	82.93 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.537 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (12.195 % of family members)
Environment Ontology (ENVO)	Unclassified (22.764 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.715 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.24% β-sheet: 19.05% Coil/Unstructured: 65.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
d.171.1.1: Fibrinogen C-terminal domain-like	d1lwuc1	1lwu	0.54049
c.77.1.0: automated matches	d3ty4a_	3ty4	0.53041
c.77.1.0: automated matches	d3flka_	3flk	0.5292
d.89.1.2: Replication initiation protein E1	d1r9wa_	1r9w	0.52583
d.89.1.2: Replication initiation protein E1	d1f08a1	1f08	0.5223

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00072	Response_reg	2.44
PF00589	Phage_integrase	1.63
PF04226	Transgly_assoc	1.63
PF13847	Methyltransf_31	1.63
PF03401	TctC	0.81
PF01575	MaoC_dehydratas	0.81
PF13481	AAA_25	0.81
PF01007	IRK	0.81
PF01381	HTH_3	0.81
PF13520	AA_permease_2	0.81
PF07521	RMMBL	0.81
PF03466	LysR_substrate	0.81
PF10571	UPF0547	0.81
PF13185	GAF_2	0.81
PF00903	Glyoxalase	0.81
PF09361	Phasin_2	0.81
PF01351	RNase_HII	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.63
COG0164	Ribonuclease HII	Replication, recombination and repair [L]	0.81
COG1039	Ribonuclease HIII	Replication, recombination and repair [L]	0.81
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
All Organisms	root	All Organisms	41.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
cellular organisms	root	All Organisms → cellular organisms	41.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.63 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	19.51 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.81 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.81 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.94 %
Falsiroseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas	1.63 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.81 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.63 %
Falsiroseomonas bella	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas bella	1.63 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.81 %
Mesorhizobium helmanticense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium helmanticense	0.81 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.81 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	0.81 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.81 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Falsiroseomonas bella	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas bella	1.63 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.81 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.81 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.81 %
Mesorhizobium helmanticense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium helmanticense	0.81 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.81 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	0.81 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.81 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101999588	Not Available	1180	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1007499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1771	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10015741	Not Available	2077	Open in IMG/M
3300000787\|JGI11643J11755_11497947	Not Available	1026	Open in IMG/M
3300000955\|JGI1027J12803_100340848	Not Available	1560	Open in IMG/M
3300000955\|JGI1027J12803_104581650	Not Available	930	Open in IMG/M
3300002822\|BMAI_1245233	Not Available	1054	Open in IMG/M
3300004156\|Ga0062589_101248608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	714	Open in IMG/M
3300004463\|Ga0063356_100039797	All Organisms → cellular organisms → Bacteria → Proteobacteria	4632	Open in IMG/M
3300004479\|Ga0062595_100348550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1030	Open in IMG/M
3300005093\|Ga0062594_100266493	Not Available	1269	Open in IMG/M
3300005332\|Ga0066388_101196847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1298	Open in IMG/M
3300005332\|Ga0066388_102081157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1020	Open in IMG/M
3300005332\|Ga0066388_102942602	Not Available	870	Open in IMG/M
3300005332\|Ga0066388_107707658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	539	Open in IMG/M
3300005333\|Ga0070677_10349711	Not Available	765	Open in IMG/M
3300005355\|Ga0070671_100448746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1106	Open in IMG/M
3300005434\|Ga0070709_11500729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	547	Open in IMG/M
3300005439\|Ga0070711_100052045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2816	Open in IMG/M
3300005455\|Ga0070663_100348436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1198	Open in IMG/M
3300005466\|Ga0070685_11135773	Not Available	591	Open in IMG/M
3300005466\|Ga0070685_11553512	Not Available	511	Open in IMG/M
3300005535\|Ga0070684_101908013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	561	Open in IMG/M
3300005539\|Ga0068853_100812400	Not Available	896	Open in IMG/M
3300005544\|Ga0070686_101468883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	574	Open in IMG/M
3300005615\|Ga0070702_101732942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	520	Open in IMG/M
3300005713\|Ga0066905_100002737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6704	Open in IMG/M
3300005713\|Ga0066905_100602041	All Organisms → cellular organisms → Bacteria → Proteobacteria	930	Open in IMG/M
3300005764\|Ga0066903_100965559	Not Available	1552	Open in IMG/M
3300005764\|Ga0066903_101485791	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300005764\|Ga0066903_101646927	Not Available	1219	Open in IMG/M
3300005764\|Ga0066903_101896125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1141	Open in IMG/M
3300005764\|Ga0066903_103019849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	911	Open in IMG/M
3300005764\|Ga0066903_103044607	Not Available	908	Open in IMG/M
3300005764\|Ga0066903_107206068	Not Available	575	Open in IMG/M
3300005764\|Ga0066903_107702634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	554	Open in IMG/M
3300005842\|Ga0068858_100641549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1032	Open in IMG/M
3300005983\|Ga0081540_1047735	Not Available	2150	Open in IMG/M
3300006173\|Ga0070716_100171196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1417	Open in IMG/M
3300006854\|Ga0075425_100209979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2238	Open in IMG/M
3300006871\|Ga0075434_102639571	Not Available	502	Open in IMG/M
3300006904\|Ga0075424_100352886	Not Available	1567	Open in IMG/M
3300009101\|Ga0105247_10058475	Not Available	2385	Open in IMG/M
3300009148\|Ga0105243_10577925	Not Available	1078	Open in IMG/M
3300009177\|Ga0105248_10768690	Not Available	1087	Open in IMG/M
3300009506\|Ga0118657_12055435	Not Available	658	Open in IMG/M
3300010046\|Ga0126384_10096752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2167	Open in IMG/M
3300010358\|Ga0126370_10807205	Not Available	837	Open in IMG/M
3300010358\|Ga0126370_11967342	Not Available	570	Open in IMG/M
3300010360\|Ga0126372_11896010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	641	Open in IMG/M
3300010362\|Ga0126377_12520588	Not Available	590	Open in IMG/M
3300010366\|Ga0126379_12670114	Not Available	596	Open in IMG/M
3300010397\|Ga0134124_10266879	Not Available	1581	Open in IMG/M
3300010398\|Ga0126383_10340607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1516	Open in IMG/M
3300010399\|Ga0134127_10773724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	1006	Open in IMG/M
3300011119\|Ga0105246_11099348	Not Available	726	Open in IMG/M
3300012931\|Ga0153915_12353538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	623	Open in IMG/M
3300012948\|Ga0126375_11553845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	568	Open in IMG/M
3300012957\|Ga0164303_11475011	Not Available	512	Open in IMG/M
3300012960\|Ga0164301_10146244	Not Available	1438	Open in IMG/M
3300012961\|Ga0164302_10047911	Not Available	2100	Open in IMG/M
3300012986\|Ga0164304_10894077	Not Available	694	Open in IMG/M
3300012986\|Ga0164304_11786094	Not Available	514	Open in IMG/M
3300012986\|Ga0164304_11888565	Not Available	500	Open in IMG/M
3300012987\|Ga0164307_10070670	Not Available	2084	Open in IMG/M
3300012988\|Ga0164306_10312217	Not Available	1151	Open in IMG/M
3300013308\|Ga0157375_12556844	Not Available	610	Open in IMG/M
3300014969\|Ga0157376_11084617	Not Available	826	Open in IMG/M
3300015371\|Ga0132258_10062922	All Organisms → cellular organisms → Bacteria → Proteobacteria	8564	Open in IMG/M
3300015371\|Ga0132258_10863747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2283	Open in IMG/M
3300015371\|Ga0132258_10887891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2250	Open in IMG/M
3300015371\|Ga0132258_11101713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2007	Open in IMG/M
3300015371\|Ga0132258_11537880	All Organisms → cellular organisms → Bacteria → Proteobacteria	1680	Open in IMG/M
3300015371\|Ga0132258_11680232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	1602	Open in IMG/M
3300015371\|Ga0132258_13402017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas bella	1092	Open in IMG/M
3300015372\|Ga0132256_100155755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium helmanticense	2298	Open in IMG/M
3300015373\|Ga0132257_101042515	Not Available	1030	Open in IMG/M
3300015374\|Ga0132255_100699564	Not Available	1505	Open in IMG/M
3300015374\|Ga0132255_104320605	Not Available	603	Open in IMG/M
3300016270\|Ga0182036_10548085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300016294\|Ga0182041_11772489	Not Available	572	Open in IMG/M
3300016319\|Ga0182033_10178271	Not Available	1670	Open in IMG/M
3300016319\|Ga0182033_10478538	Not Available	1066	Open in IMG/M
3300016319\|Ga0182033_12024320	Not Available	525	Open in IMG/M
3300016319\|Ga0182033_12130883	Not Available	511	Open in IMG/M
3300016341\|Ga0182035_10117296	Not Available	1984	Open in IMG/M
3300016371\|Ga0182034_10379346	Not Available	1155	Open in IMG/M
3300016371\|Ga0182034_10882767	Not Available	768	Open in IMG/M
3300018028\|Ga0184608_10068021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1439	Open in IMG/M
3300018028\|Ga0184608_10109892	Not Available	1159	Open in IMG/M
3300018072\|Ga0184635_10053682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas bella	1558	Open in IMG/M
3300018081\|Ga0184625_10156949	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300021560\|Ga0126371_10099946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2887	Open in IMG/M
3300022694\|Ga0222623_10117495	Not Available	1035	Open in IMG/M
3300022694\|Ga0222623_10193636	Not Available	789	Open in IMG/M
3300025906\|Ga0207699_10383703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	998	Open in IMG/M
3300025911\|Ga0207654_10684672	Not Available	736	Open in IMG/M
3300025927\|Ga0207687_10047645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2972	Open in IMG/M
3300025931\|Ga0207644_10759672	Not Available	810	Open in IMG/M
3300025932\|Ga0207690_11606277	Not Available	543	Open in IMG/M
3300025941\|Ga0207711_11224804	Not Available	692	Open in IMG/M
3300026041\|Ga0207639_10869452	Not Available	842	Open in IMG/M
3300027063\|Ga0207762_1062525	Not Available	539	Open in IMG/M
3300031170\|Ga0307498_10491428	Not Available	500	Open in IMG/M
3300031720\|Ga0307469_10210966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1526	Open in IMG/M
3300031724\|Ga0318500_10735909	Not Available	504	Open in IMG/M
3300031854\|Ga0310904_10362573	Not Available	938	Open in IMG/M
3300031858\|Ga0310892_10372979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	922	Open in IMG/M
3300031890\|Ga0306925_11911236	Not Available	564	Open in IMG/M
3300031890\|Ga0306925_12282688	Not Available	500	Open in IMG/M
3300031894\|Ga0318522_10275624	Not Available	638	Open in IMG/M
3300031941\|Ga0310912_11180670	Not Available	583	Open in IMG/M
3300031945\|Ga0310913_10885665	Not Available	628	Open in IMG/M
3300032003\|Ga0310897_10250594	Not Available	793	Open in IMG/M
3300032075\|Ga0310890_11360302	Not Available	582	Open in IMG/M
3300032076\|Ga0306924_10611544	Not Available	1232	Open in IMG/M
3300032770\|Ga0335085_10000042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	454236	Open in IMG/M
3300032770\|Ga0335085_10004763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22239	Open in IMG/M
3300032770\|Ga0335085_10361726	All Organisms → cellular organisms → Bacteria → Proteobacteria	1697	Open in IMG/M
3300033433\|Ga0326726_10909930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300033486\|Ga0316624_10199254	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.54%
Host-Associated	Host-Associated	28.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.23%
Plants	Host-Associated → Plants	28.46%
Aquatic	Environmental → Aquatic	7.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.20%
Sediment	Environmental → Aquatic → Sediment	4.88%
Marine	Environmental → Aquatic → Marine	1.63%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Peat	Environmental → Terrestrial → Peat	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.65%
Loam	Environmental → Terrestrial → Soil → Loam	19.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.06%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.81%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.25%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.44%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.81%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	8.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.06%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.63%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Mangrove Soil	Environmental → Aquatic → Marine → Oceanic → Sediment → Mangrove Soil	0.81%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002822	Illumina_Fosmid_Bertioga	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1019995882	3300000364	Soil	MMTLGNLRENGVRSLAITCGAIWCHHEAVLDVNAFADDLTVPAFGPRMVCTVCGAIGADARPNWNERAPICLFGSRHNHRRGTQHGP*
AF_2010_repII_A01DRAFT_10074993	3300000580	Forest Soil	MMTLRNMREHGVHSLDIRCGALWCNHEAILDVFTYADDLTVPSFCPRMVCTVCGAIGADARPNWNERAPASLFGPRLSN*
AF_2010_repII_A1DRAFT_100157415	3300000597	Forest Soil	MMTLGNMRECGVRSLAIRCGALWCNHEAVLDASRFADDLTVPSFGPRMVCTICGAIGADARPNWNERAPRCLFGSHS*
JGI11643J11755_114979471	3300000787	Soil	ENGVRSLAITCEALWCRHEAVLDVSTFSDDVTVPSFGPRMVCTVCGAIGADARPYWNERAPVSLFGPRL*
JGI1027J12803_1003408483	3300000955	Soil	MMTLRNMRENGVRSLAITCGAVWCNHQAVLDVNAFADDVTVPSFGPRMVCTVCGAIGADARPNWNERTSITLFGSHLSN*
JGI1027J12803_1045816502	3300000955	Soil	MTLGNLRENGVRSLAITCGAIWCHHEAVLDVNAFADDLTVPAFGPRMVCTVCGAIGADARPNWNERAPICLFGSRHNHRRGT
BMAI_12452332	3300002822	Mangrove Soil	MHDVAHAKRSDAHDLGTMRANGVRTLAVHCGRWWCNHEAILDASGYADDVAVPVFGPRMVCTVCGAIGPDARPNWNE*
Ga0062589_1012486081	3300004156	Soil	ENGVRSLAVRCMRCHHETTLDVDGYADDVVVPSFGPRIVCTACGAIDADARPNWNERAQVCLFGRSSV*
Ga0063356_1000397974	3300004463	Arabidopsis Thaliana Rhizosphere	MRENGVRSLAVTRRALWCHHQAVLDVTTFADDVVVPSFGPRMVCTVGADARPNWNERAPRSLFGPP*
Ga0062595_1003485501	3300004479	Soil	GARGAETGVAVSALSETMTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0062594_1002664932	3300005093	Soil	MMTLANMRENGVRSLAVRCMRCHHETTLDVDGYADDVVVPSFGSRIVCTACGAIDADARPNWNERAQVCLFGRSSV*
Ga0066388_1011968473	3300005332	Tropical Forest Soil	MTLGNMRANGGALWCHHQAVLDVSAYAEDVTVPSFGPRMVCTVSGAIGADARPNWNEHAPPSLFGRNS*
Ga0066388_1020811571	3300005332	Tropical Forest Soil	REHGVHSLDIRCGALWCNHEAILDVSTYADDLTVPSFCPRMVCTVCGAIGADARPNWNERAPASLFGPRLSN*
Ga0066388_1029426021	3300005332	Tropical Forest Soil	MQGMGLEFAMMTLRNMREHGVHSLDIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCTICGAIGADARPNWNERAPASLFGARLSN*
Ga0066388_1077076582	3300005332	Tropical Forest Soil	AGCKLLAMMTLRNMREHGVHSLDIRCGALWCNHEAVMNVSTYADGLTVPSFGPRMVCTVCGAIGADARPNWNERAPVSLF*
Ga0070677_103497112	3300005333	Miscanthus Rhizosphere	MTLANMRENGVRSLAVRCMRCHHETTLDVDGYADDVVVPSFGSRIVCTACGAIDADARPNWNERAQVCLFGRSSV*
Ga0070671_1004487462	3300005355	Switchgrass Rhizosphere	MTLRNMRENGVRSPAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0070709_115007291	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0070711_1000520455	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VAVSALSETMTLRNMRENGVRSPAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0070663_1003484362	3300005455	Corn Rhizosphere	VAVSALSETMTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNQRQLVAGQL*
Ga0070685_111357732	3300005466	Switchgrass Rhizosphere	VAVSALSETMTLRNMRENGVRSPAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNQRQLVAGQL*
Ga0070685_115535121	3300005466	Switchgrass Rhizosphere	SDMMTLRNMREQNVRSLWVRCGALGCHHDAVIDVSAFPDDAAVPSFGPRMVCTVCGAVGGDVMPNWNERASNCLFGSHLSN*
Ga0070684_1019080132	3300005535	Corn Rhizosphere	MTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAG
Ga0068853_1008124001	3300005539	Corn Rhizosphere	MMTLANMRENGVRSLAVRCMRCHHETTLDVDGYADDVDVPSFGSRIVCTACGAIDADARPNWNERAQVCLFGRSSV*
Ga0070686_1014688831	3300005544	Switchgrass Rhizosphere	VAVSALSETMTLRNMRENGVRSPAITCGAVLCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0070702_1017329422	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VAVSALSETMTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWN
Ga0066905_1000027374	3300005713	Tropical Forest Soil	MTLGNMRENGVHSLAVTCGALWCHHEAVMDVAAYADDVTVPSFCSRMVCTVCGAIGADARPNWNERAPRSLFGSS*
Ga0066905_1006020412	3300005713	Tropical Forest Soil	MMNLGNMRQHGVRSLAITCGALWCHHQAAPDVSAFADDVTVPSFGPRMVCTVCGAIGADARPNWNKRAPKIMKL*
Ga0066903_1009655593	3300005764	Tropical Forest Soil	VAAALKQTAMMTLRNTREHGVHSLAIRCGALWCNHEALLDVSAFADDLTVPSFSPRMVCTICGAIGADARPNWNERVPVSLFGSRLSN*
Ga0066903_1014857913	3300005764	Tropical Forest Soil	MTLRNMREHGVHSLDIRCGALWCNHEAVMNVSTYADGLTVPSFGPRMVCTVCGAIGADARPNWNERAPVSLF*
Ga0066903_1016469272	3300005764	Tropical Forest Soil	MMTLCNMREHGVHTLAIRCGALWCNHEAIFDVSTYADDLTVPSFGPRMVCTVCGAIGADARPNWNERAPVSLFGARLGN*
Ga0066903_1018961252	3300005764	Tropical Forest Soil	MMTLRNMREHGVHSLDIRCGALWCNHEAILDVFTYADDLTVSSFCPRMVCTVCGAIGADARPNWNERAPASLFGPRLSN*
Ga0066903_1030198492	3300005764	Tropical Forest Soil	MMTLRNMREHGVHSLDIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCTICGAIGADARPNWNERAPASLFGPRLSN*
Ga0066903_1030446072	3300005764	Tropical Forest Soil	MMTLGNIRENGVRSLAVTCGALWCHHQAVLDVAAYADDLTVPSFGPRMVCTLCGAIGADARPNWNERAPACLFGPYR*
Ga0066903_1072060682	3300005764	Tropical Forest Soil	MMTLRNMRVHGVHSLAIRCGALWRNHEAILDVSTYADDMTVPSFCPRMVCTVCGAIGADARPNWNERAPASLFGARLSN*
Ga0066903_1077026342	3300005764	Tropical Forest Soil	MTLRNMREHGVHSLDIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCTVCGAIGADARPNWNERAPASLFGPRLSN*
Ga0068858_1006415492	3300005842	Switchgrass Rhizosphere	VAVSALSETMTLRNMRETGVRSPAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0081540_10477352	3300005983	Tabebuia Heterophylla Rhizosphere	MMTLGIMRDHLVRSLAVTCGTLWCHHQAVLDVAAFADDMTVPSFGPRLVCTVCGAIGADARPNWNERVSTCLFGPKLI*
Ga0070716_1001711962	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VAVSALSETMTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0075425_1002099793	3300006854	Populus Rhizosphere	MTLRNMCENGVRSLAITCGAVWCNHQAILDVNVFADDVVVPSFGPRMVCTVCGAIGADARPNWNERASACLFSHST*
Ga0075434_1026395712	3300006871	Populus Rhizosphere	MTLGNMRQQGVRALAVYCGALWCHHQAISNVEAYADDVPVPAFGPRLVCTVCGAIGGEARPNWNERAPVSLFGRYGGG*
Ga0075424_1003528863	3300006904	Populus Rhizosphere	MMTLRNMCENGVRSLAITCGAVWCNHQAILDVNVFADDVVVPSFGPRMVCTVCGAIGADARPNWNERASACLFSHST*
Ga0105247_100584755	3300009101	Switchgrass Rhizosphere	MTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0105243_105779252	3300009148	Miscanthus Rhizosphere	MMTLRNMRENGVRSLAVTCGAVWCNHQAVLDVNAFADDVVVPSFGPRMVCTVCGAIGADARPNWNERAPACLFGIHP*
Ga0105248_107686902	3300009177	Switchgrass Rhizosphere	MTLRNMRENGVRSPAITYGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGPL*
Ga0105248_125711021	3300009177	Switchgrass Rhizosphere	LWIRCGALDCHHDAVIDVSAFPDDAAVPSFGPRMVCTVCGAVGGDVMPNWNERASNCLFGSHLSN*
Ga0118657_120554352	3300009506	Mangrove Sediment	MTPMTLGNMRANGVKALAVSRVACHHSAIVDVTNCPDEVPVPMFGPRMVCTARGAIGADARPNWNERAPVNLFEPIRR*
Ga0126384_100967522	3300010046	Tropical Forest Soil	MMTLGNMREHGVRSLAVSCGALWCHHQAALDVEAFADDVTVPSFGPRMVCTTCGAIGADARPNWNERAPASLFGRNS*
Ga0126370_108072052	3300010358	Tropical Forest Soil	MMTLRNMREHGVHSLDIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCTVCGAIGADAPPELK*
Ga0126370_119673421	3300010358	Tropical Forest Soil	MMTLRNMREHGVHSLDIRCGALWCNHEAVMNVSTYADGLTVPSFGPRMVCTVCGAIGADARPNWN
Ga0126372_118960101	3300010360	Tropical Forest Soil	IDNARYNMMTLGNMREHGVRSLAVSCGALWCHHQAVLDVEAFADDVTVPSFGPRMVCTTCGAIGADARPNWNERAPASLFGRNS*
Ga0126377_125205881	3300010362	Tropical Forest Soil	MQGMGLEFAMMTLRNMREHGVHSLDIRCGALWCNHEAILDVSTYADDMTVPSFCPRMVCTVCGAIAADARPNWNERAPASLYGPRLSN*
Ga0126379_126701142	3300010366	Tropical Forest Soil	MMTLRNMREHGVHSLAIRCGALWCNHEAVMDVSAFADDLTVPSFGPRMVCTICGAIGADARPNWNERAPASLFGPQLSN*
Ga0134124_102668793	3300010397	Terrestrial Soil	MRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0126383_103406072	3300010398	Tropical Forest Soil	MRENGVRSLAITCGALWCHRPALDVSGYADDVTVPSLGPRMVCTMCGAVGADARPNWNERVPVSLFCRNP*
Ga0134127_107737241	3300010399	Terrestrial Soil	MMTLANMRENGVRSLAVRCMRCHHETTLDVDGYADDVVVPSFGSRIVCTACGAIDADARPNWNERAQVCLFGR
Ga0105246_110993481	3300011119	Miscanthus Rhizosphere	MTLGNMRQQNVHSLWVRCGALDCHHDAIIDVSTFPDNAAVPSFGPRMVCTRCGAIGGDVMPNWNERTSISLYGSHLSN*
Ga0153915_123535381	3300012931	Freshwater Wetlands	MTLGNMRVNGVRNLAVFCGACHHQAVVDVSRYADGVVVPAFSLRMVCTQCGAIGADAQPNWQERAPVGAFMGRGA*
Ga0126375_115538451	3300012948	Tropical Forest Soil	MMTLGNMRENGVHSLAVTCGALWCHHEAVMDVAAYADDVTVPSFCSRMVCTVCGAIGADARPNWNERAPRSLFG
Ga0164303_114750111	3300012957	Soil	AETGVAVSALSETMTLRNMRENGVRSLAITCGAGWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0164301_101462442	3300012960	Soil	MTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNQRQLVAGQL*
Ga0164302_100479114	3300012961	Soil	MTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGPL*
Ga0164304_108940773	3300012986	Soil	MTLRNMRENGVRSPAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQ
Ga0164304_117860942	3300012986	Soil	MMTLDNMRENGVRSQAITCGAVWCNHQAVLDIDAFADDVVVPSFAPRMVCTVRGAIGADARPNWQERAQVCLFGNRPRV*
Ga0164304_118885652	3300012986	Soil	MTLRNMRENGVRSLWIRSGALHCHHDAIIDVSAFPDDATVPSFGPRMVCTVCGAIGGEVMPNWNERTAICLFGSHLSN*
Ga0164307_100706702	3300012987	Soil	MTLRNMRENGVRSPAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNQRQLVAGQL*
Ga0164306_103122171	3300012988	Soil	MSLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNQRQLVAGQL*
Ga0157375_125568442	3300013308	Miscanthus Rhizosphere	MMTLGNMRQQNVHSLWVRCGALDCHHDAIIDVSTFPDNAAVPSFGPRMVCTRCGAIGGDVMPNWNERTSISLYGSHLSN*
Ga0157376_110846172	3300014969	Miscanthus Rhizosphere	VRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL*
Ga0132258_1006292210	3300015371	Arabidopsis Rhizosphere	MTLRNMRENGVRSLAITCGAAWCRHQAVLEVSAFADDVAVPSFGPRMVCTVCGAIGADARPNWNERAPRSSFGPD*
Ga0132258_108637472	3300015371	Arabidopsis Rhizosphere	MMTLGNMRKNCVRSLAVTCGALWCHHEAVLDISGYADDVTVPSFCPRMVCTVCGAIGADARPNWNEITRVSLFGPTQQ*
Ga0132258_108878912	3300015371	Arabidopsis Rhizosphere	MTLRNMRENGVRSPAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGPL*
Ga0132258_111017133	3300015371	Arabidopsis Rhizosphere	MMTLNNMRANGVHTLSIRCGAIYCHHEAVLDVSTYADDLPVPAFGPRMVCTVCGAIGADARPNWNETAPKSLFGPLR*
Ga0132258_115378801	3300015371	Arabidopsis Rhizosphere	MRQQGVHSLWVRCGALHCHHDATMDVNAFDDDVAVPSFGPRMVCTVCGAIGADARPNWNERAPPSLFGQR*
Ga0132258_116802323	3300015371	Arabidopsis Rhizosphere	MMTLGNMRGNGVRSLAITCGAFWCHHESVLDVTAFADDVTVPSFGPRMVCTVCGAIGADARPNWNERAPISLFGSHA*
Ga0132258_134020171	3300015371	Arabidopsis Rhizosphere	MMTLRNMRENGVHSLAITCGALWCHHQAVLDVSAFADDVVVPSFGPHMVCTVCGAIGADARPNWNERAPACLFGQSA*
Ga0132256_1001557552	3300015372	Arabidopsis Rhizosphere	MTLGNMRENGVRSLAVTCGAVWCHHESVLDVSAYPDDVTVPAFGPRMVCTVYGAIGADARPNWNERAPVNGAC*
Ga0132257_1010425154	3300015373	Arabidopsis Rhizosphere	MSQHTEKALATKTNCASPMTLRNMRENGVRSLAITCGAAWCRHQAVLEVSAFADDVAVPSFGPRMVCTVCGAIGADARPNWNERAPRSSFGPD*
Ga0132255_1006995642	3300015374	Arabidopsis Rhizosphere	MKTLRNMRDQNVRSLWVRCGALGCHHHAVIDVSAFPDDATVPSFGPRMVCTICGAIGGDVMPNWNERTSISLYGLH*
Ga0132255_1043206052	3300015374	Arabidopsis Rhizosphere	MMTLGNMRENGARSLAITCGAVWCNHQAVLDVNADDVTVPSFGPRMVCTICGAIGADARPNWNERAPACLFGLNSTVTRHE*
Ga0182036_105480852	3300016270	Soil	LAIRCGALWCNHEAILDVSTYADGLTVPSFGPRMVCTICGAIGADARPNWNERAPASLYGPRLSN
Ga0182041_117724892	3300016294	Soil	VHSLDIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCTICGAIGADARPNWNERAPVSLYGPRLSN
Ga0182033_101782712	3300016319	Soil	MMTLRNMREHGVHSLAIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCTICGAIGADARPNWNERAPACLFGAPQ
Ga0182033_104785382	3300016319	Soil	MMTLRNMREHGAHSLDIRCGALWCNHEAILDVSTYADDLTVPSFCPRMVCTVCGAIGADARPNWNERAPVWTTTEQLTMELL
Ga0182033_120243201	3300016319	Soil	MMTLRNMREHDVHSLDIRCGALWCNHEAILDVSTYADDLTLPSFCPRMVCTVCGAIGADARPNWNERAPASLFGARLSN
Ga0182033_121308832	3300016319	Soil	MTLANMREHDVHSLDIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCIGCGAIGADARPNWNERAPASLYGPRLSN
Ga0182035_101172963	3300016341	Soil	MMTLRNMREHGVHSLAIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCTICGAIGADARPNWNERAPACLFGARQ
Ga0182034_103793461	3300016371	Soil	MMTLRNMREHGVHSLAIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCTICGAIGADARPNWNERAPASQLER
Ga0182034_108827673	3300016371	Soil	MTLDWSACTQPNRCLKFLAMMTLRNMREHGVHSLAIRCGALWCNHEAILDVSTYADGLTVPSFGPRMVCTICGAIGADARPNWNERAPACLFGARQ
Ga0184608_100680213	3300018028	Groundwater Sediment	MMTLGNMRKNGVRSLAITCGAIHCHHDAIIDVSGFADDVTVPTFGPHMVCTVCGAIGADARPNWNERAPRTLFGPR
Ga0184608_101098922	3300018028	Groundwater Sediment	MALFEMTLGNMRQQNVRSLSITCGALHCHHGAIIDVSAFADDVAVPAFGPRMVCTVCGAIGADARPNWNERASVSLFGGHL
Ga0184635_100536824	3300018072	Groundwater Sediment	MNTTKPVEPMTLANMRANGVRSLAITCSSLWCSHRGVLDVSSDLDNVAVPWFGPRMVCTVCGAIGADARPNWNERTA
Ga0184625_101569492	3300018081	Groundwater Sediment	MTLGNMRENGVRTLAVRCGALWCSHEGVLDVSPYADEVAVPTFGPRMVCTICGAIGADARPNWQQRAPVSLFGRHSA
Ga0126371_100999463	3300021560	Tropical Forest Soil	MTLGNMRANGGALWCHHQAVLDVSAYAEDVTVPSFGPRMVCTVSGAIGADARPNWNEHAPPSLFGRNS
Ga0222623_101174953	3300022694	Groundwater Sediment	MMTLANMRQQNVRSLSITCGALGCHHQAVLDISDYVDDVAVPAFGPRMVCTVCGAIGADARPNWNERAPANLFGSHGRA
Ga0222623_101936361	3300022694	Groundwater Sediment	MALFEMTLGNMRQQNVRSLSITCGALHCHHGPIIDVSAFADDVAVPAFGPRMVCTVCGAIGADARPNWNERASVSLFGGHL
Ga0207699_103837032	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VAVSALSETMTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGQL
Ga0207654_106846722	3300025911	Corn Rhizosphere	MMTLANMRENGVRSLAVRCMRCHHETTLDVDGYADDVVVPSFGSRIVCTACGAIDADARPNWNERAQVCLFGRSSV
Ga0207687_100476456	3300025927	Miscanthus Rhizosphere	VRSLAVRCMRCHHETTLDVDGYADDVVVPSFGSRIVCTACGAIDADARPNWNERAQVCLFGRSSV
Ga0207644_107596723	3300025931	Switchgrass Rhizosphere	MTLRNMRENGVRSPAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNE
Ga0207690_116062771	3300025932	Corn Rhizosphere	VAVSALSETMTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNQR
Ga0207711_112248042	3300025941	Switchgrass Rhizosphere	VAVSALSETMTLRNMRENGVRSPAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNERQLVAGPL
Ga0207711_119121652	3300025941	Switchgrass Rhizosphere	VAVSALSETMTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADA
Ga0207639_108694522	3300026041	Corn Rhizosphere	MMTLANMRENGVRSLAVRCMRCHHETTLDVDGYADDVDVPSFGSRIVCTACGAIDADARPNWNERAQVCLFGRSSV
Ga0207762_10625252	3300027063	Tropical Forest Soil	MTLGNMRAHGVHTLSIYCGAIYCHHAAVLDVSAYANDLTVPSFGPRMVCTVCGAIGADARPNWNERAPPSLFGSARRRSK
Ga0307498_104914282	3300031170	Soil	HDRGDTAMMTLGNMRENDVRSLAIMCGAVWCNHHAVLDVSAFADHVTVPSFGARMVCTVRGAIGADARPNWNERAQPCLYGHHGG
Ga0307469_102109661	3300031720	Hardwood Forest Soil	MMTLGNMRENGVRSLAITRGAVWCHHQAVLDVNAFADDVVVPSFGPRMACTACGAIGADARPNWNERAPPCLFGL
Ga0318500_107359092	3300031724	Soil	MMTLRNMREHGVHSLDIRCGALWCNHEAILDVSTYADDLTVPSFCPRMVCTVCGAIGADARPNWNERAPASLYGPGLS
Ga0310904_103625731	3300031854	Soil	MTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPTWNERQLVAGQL
Ga0310892_103729792	3300031858	Soil	VAVSALSETMTLRNMRENGVRSLAITCGAVWCNHQAVLDVNTFADDVVVPSFGPRMVCTVCGAIGADARPNWNQRQLVAGQL
Ga0306925_119112362	3300031890	Soil	MMTLGNMRECGVRSLAIRCGALWCNHEAVLDVGRFADGLTVPSFGPRMICTACGAIGADARPNWNERAPPSLYGPSRQAR
Ga0306925_122826882	3300031890	Soil	MMTLRNMREHGVHSLDIRCGALWCNHGAILDVSTYADDLTVPSFGPRMVCTICGAIGADARPNWNERAPASLFGPRLSN
Ga0318522_102756241	3300031894	Soil	MMTLRNMREHGVHSLDIRCGALWCNHEAILDVSTYADELTVPSFCPRMVCTVCGAIGADARPNWNERAPASLYGPR
Ga0310912_111806702	3300031941	Soil	MGFGISTCKLLAMMTLRNMREHGVHSLAIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCTICGAIGADARPNWNERAPASQLER
Ga0310913_108856651	3300031945	Soil	LAMMTLRNMREHGVHSLDIRCGALWCNHEAILDVSAFADGLTVASFGPRMVCTICGAIGADARPNWNERAPACLFGARQ
Ga0310897_102505942	3300032003	Soil	MMTLRNMCENGVRSLAITCGAVWCNHQAILDVNVFADDVVVPSFGPRMVCTVCGAIGADARPNWNERASACLFSHST
Ga0310890_113603021	3300032075	Soil	MFEPMTLGNMRQQGVRSLWIRCGALHCNHDAITDVSAFADDATVPSFGSRMVCTVCGAIGADARPNWQERTTRTLFGRHSS
Ga0306924_106115441	3300032076	Soil	MMTLRNMRQIGVHSLAIRCGALWCNHEAILDVSTYADDLTVPSFGPRMVCTICGAIGADARPNWNERAPVSLYGPRLSN
Ga0335085_10000042333	3300032770	Soil	MPHLYSPMTLGNMRANGVRSIAVCCLGRDCHRDAVVDVGRYADDVPVPAFGPRMVCTVCGAIGADARPNWQERAPAYLFGVREA
Ga0335085_100047634	3300032770	Soil	MTLGNMRANGVRSLAIYCERCHHQELLGVNEFSDDIPVPAFGPRMVCTRCGAISADARPHWNERAPVCLFGTSADK
Ga0335085_103617262	3300032770	Soil	MMTLGNMRENGMRSLSVACGALCYHHQAVLDVSAYANEVTVPSFGPRMVCTSCSAIGADARSNWSE
Ga0326726_109099302	3300033433	Peat Soil	MTLGNMRQRGVRSLSVACGALHCHHDATMDVSGFADDVTVPSFSPRMVSTVFGTIGADARPNWNERAACLFGPHP
Ga0316624_101992542	3300033486	Soil	MTLGNMRRNGVRTLAVHCGGRYCHHESVLDVSDYADDVPVPAFGPRTVCTRCGAIGADARPNWQERAPVSLFGRAPSVTKSRAAASMISPWA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070500

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences