Metagenome / Metatranscriptome Family F070507

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070507
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	119 residues
Representative Sequence	MTKIRILFVVALIAISSLASAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKL
Number of Associated Samples	95
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.75 %
% of genes near scaffold ends (potentially truncated)	99.19 %
% of genes from short scaffolds (< 2000 bps)	92.68 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.098 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.951 % of family members)
Environment Ontology (ENVO)	Unclassified (26.829 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.715 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.11% β-sheet: 4.23% Coil/Unstructured: 43.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01436	NHL	61.79
PF03030	H_PPase	2.44
PF13683	rve_3	0.81
PF08529	NusA_N	0.81
PF06739	SBBP	0.81
PF00196	GerE	0.81
PF05973	Gp49	0.81
PF01494	FAD_binding_3	0.81
PF01979	Amidohydro_1	0.81
PF08450	SGL	0.81
PF04343	DUF488	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	2.44
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.63
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.81
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.81
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.81
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.81
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.81
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.81
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.81
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.91 %
Unclassified	root	N/A	43.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.91 %
Unclassified	root	N/A	43.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.10 %
Unclassified	root	N/A	43.09 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.78 %
Unclassified	root	N/A	43.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	47.97 %
Unclassified	root	N/A	43.09 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.81 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.97 %
Unclassified	root	N/A	43.09 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.81 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.97 %
Unclassified	root	N/A	43.09 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.81 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.97 %
Unclassified	root	N/A	43.09 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.81 %
Agaricomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.97 %
Unclassified	root	N/A	43.09 %
Agaricomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	0.81 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.97 %
Unclassified	root	N/A	43.09 %
Agaricomycetes incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis	0.81 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.97 %
Unclassified	root	N/A	43.09 %
Russulales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Russulales	0.81 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10192151	Not Available	1357	Open in IMG/M
3300001593\|JGI12635J15846_10719934	Not Available	574	Open in IMG/M
3300002917\|JGI25616J43925_10279854	Not Available	623	Open in IMG/M
3300005542\|Ga0070732_10069969	All Organisms → cellular organisms → Bacteria	2045	Open in IMG/M
3300006028\|Ga0070717_11655147	Not Available	579	Open in IMG/M
3300006050\|Ga0075028_100354325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300006050\|Ga0075028_100640924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300006059\|Ga0075017_100660957	Not Available	802	Open in IMG/M
3300006162\|Ga0075030_101120493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300006162\|Ga0075030_101273324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300006172\|Ga0075018_10823655	Not Available	510	Open in IMG/M
3300006174\|Ga0075014_100341103	Not Available	801	Open in IMG/M
3300006174\|Ga0075014_100583148	Not Available	637	Open in IMG/M
3300006354\|Ga0075021_10374120	Not Available	890	Open in IMG/M
3300006358\|Ga0068871_102380835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300006755\|Ga0079222_10922249	Not Available	737	Open in IMG/M
3300009088\|Ga0099830_10557686	Not Available	938	Open in IMG/M
3300010358\|Ga0126370_12392000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300010373\|Ga0134128_10784854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300011271\|Ga0137393_10633961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300011271\|Ga0137393_11768586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012019\|Ga0120139_1129832	Not Available	647	Open in IMG/M
3300012096\|Ga0137389_10079626	All Organisms → cellular organisms → Bacteria	2556	Open in IMG/M
3300012096\|Ga0137389_11758429	Not Available	516	Open in IMG/M
3300012205\|Ga0137362_10243929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1551	Open in IMG/M
3300012207\|Ga0137381_11451277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300012211\|Ga0137377_10624796	Not Available	1013	Open in IMG/M
3300012351\|Ga0137386_10911417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300012361\|Ga0137360_10192519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1646	Open in IMG/M
3300012361\|Ga0137360_10785849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300012363\|Ga0137390_10401422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1349	Open in IMG/M
3300012917\|Ga0137395_10811347	Not Available	678	Open in IMG/M
3300012917\|Ga0137395_11077620	Not Available	571	Open in IMG/M
3300012917\|Ga0137395_11152966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300012927\|Ga0137416_11836646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300012929\|Ga0137404_10386597	Not Available	1231	Open in IMG/M
3300012929\|Ga0137404_10756245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300012944\|Ga0137410_10407108	Not Available	1097	Open in IMG/M
3300012944\|Ga0137410_12081350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012957\|Ga0164303_10814944	Not Available	644	Open in IMG/M
3300012961\|Ga0164302_11166777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300012984\|Ga0164309_10412636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300012986\|Ga0164304_11469116	Not Available	563	Open in IMG/M
3300013296\|Ga0157374_11140797	Not Available	800	Open in IMG/M
3300014056\|Ga0120125_1071512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300014200\|Ga0181526_10602445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300014501\|Ga0182024_11302024	Not Available	843	Open in IMG/M
3300015241\|Ga0137418_10398221	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Russulales	1124	Open in IMG/M
3300015245\|Ga0137409_10238445	Not Available	1620	Open in IMG/M
3300016341\|Ga0182035_10133605	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300016341\|Ga0182035_12182635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300016387\|Ga0182040_10307237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1215	Open in IMG/M
3300016404\|Ga0182037_10011089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5224	Open in IMG/M
3300016404\|Ga0182037_12057827	Not Available	513	Open in IMG/M
3300016445\|Ga0182038_11926192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300017930\|Ga0187825_10158675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300017930\|Ga0187825_10168228	Not Available	780	Open in IMG/M
3300017936\|Ga0187821_10175287	Not Available	817	Open in IMG/M
3300017955\|Ga0187817_10375696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300020199\|Ga0179592_10482600	Not Available	532	Open in IMG/M
3300020579\|Ga0210407_11324713	Not Available	537	Open in IMG/M
3300020580\|Ga0210403_10169357	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300020580\|Ga0210403_11017815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300020581\|Ga0210399_10400206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300020581\|Ga0210399_11313687	Not Available	569	Open in IMG/M
3300020581\|Ga0210399_11556868	Not Available	511	Open in IMG/M
3300020583\|Ga0210401_11414320	Not Available	553	Open in IMG/M
3300021046\|Ga0215015_10145991	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300021170\|Ga0210400_10024592	All Organisms → cellular organisms → Bacteria	4680	Open in IMG/M
3300021170\|Ga0210400_10598836	Not Available	909	Open in IMG/M
3300021171\|Ga0210405_10853268	Not Available	695	Open in IMG/M
3300021420\|Ga0210394_10441561	Not Available	1145	Open in IMG/M
3300021432\|Ga0210384_10092426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2716	Open in IMG/M
3300021432\|Ga0210384_10613870	Not Available	976	Open in IMG/M
3300021559\|Ga0210409_11561687	Not Available	536	Open in IMG/M
3300021559\|Ga0210409_11662992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300021560\|Ga0126371_11911858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300022724\|Ga0242665_10208358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300025900\|Ga0207710_10148959	Not Available	1134	Open in IMG/M
3300025928\|Ga0207700_11759727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300026035\|Ga0207703_10682380	Not Available	976	Open in IMG/M
3300026320\|Ga0209131_1136781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300026515\|Ga0257158_1040616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300026555\|Ga0179593_1021828	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300027480\|Ga0208993_1033049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300027512\|Ga0209179_1105641	Not Available	628	Open in IMG/M
3300027587\|Ga0209220_1110108	Not Available	721	Open in IMG/M
3300027610\|Ga0209528_1103587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300027676\|Ga0209333_1172835	Not Available	576	Open in IMG/M
3300027727\|Ga0209328_10097740	Not Available	897	Open in IMG/M
3300027842\|Ga0209580_10131451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1225	Open in IMG/M
3300027842\|Ga0209580_10149245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300027842\|Ga0209580_10414944	Not Available	671	Open in IMG/M
3300027857\|Ga0209166_10251460	Not Available	938	Open in IMG/M
3300027884\|Ga0209275_10414474	Not Available	761	Open in IMG/M
3300027903\|Ga0209488_10302873	Not Available	1193	Open in IMG/M
3300027903\|Ga0209488_10378071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300027911\|Ga0209698_10757959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300027911\|Ga0209698_10931086	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300028047\|Ga0209526_10237483	Not Available	1251	Open in IMG/M
3300028792\|Ga0307504_10009621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2148	Open in IMG/M
3300028906\|Ga0308309_10870838	Not Available	782	Open in IMG/M
3300031057\|Ga0170834_108519764	Not Available	849	Open in IMG/M
3300031718\|Ga0307474_10106653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2097	Open in IMG/M
3300031744\|Ga0306918_11214481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300031751\|Ga0318494_10596360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300031753\|Ga0307477_10110891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1910	Open in IMG/M
3300031754\|Ga0307475_10109420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2165	Open in IMG/M
3300031754\|Ga0307475_10375163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300031796\|Ga0318576_10331772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300031820\|Ga0307473_10362119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300031820\|Ga0307473_10571393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300031820\|Ga0307473_10778066	Not Available	680	Open in IMG/M
3300031820\|Ga0307473_11456302	Not Available	518	Open in IMG/M
3300031823\|Ga0307478_11406721	Not Available	579	Open in IMG/M
3300031833\|Ga0310917_10118113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1724	Open in IMG/M
3300031890\|Ga0306925_10545986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1229	Open in IMG/M
3300031981\|Ga0318531_10486256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300032035\|Ga0310911_10287787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300032042\|Ga0318545_10192733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300032060\|Ga0318505_10463928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300032180\|Ga0307471_102765729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300033475\|Ga0310811_10781232	Not Available	897	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.75%
Host-Associated	Host-Associated	3.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.74%
Aquatic	Environmental → Aquatic	13.01%
Plants	Host-Associated → Plants	3.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.74%
Sediment	Environmental → Aquatic → Sediment	8.94%
Freshwater	Environmental → Aquatic → Freshwater	4.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.17%
Loam	Environmental → Terrestrial → Soil → Loam	9.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.13%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.25%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.51%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101921511	3300001593	Forest Soil	MTKIRVLFVVALMAVSSLASAQEAMKKGDKSWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEVGRQGQVEDKAEMVKRQTATAAAHPVSPGDAGPNPQDF
JGI12635J15846_107199342	3300001593	Forest Soil	MTKVRVLFVVALMAISTLASAQEMMKKGDKSWTELEKQLADINDQWVCAHKYHKDHAQDCVDFKNSIWPETFFEVGRQGQVETKQEMVKRQTATAVAHPVSPGD
JGI25616J43925_102798542	3300002917	Grasslands Soil	VAEEYEKVEVVEFRGVSNIVPPGRRLAMMRIRVLFVVALMAVSSLAIAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATARPVSPGDAGPNPQDFKLMAVYGNV
Ga0070732_100699693	3300005542	Surface Soil	MTRIRVVFVMALLAVSSAAFAQDAVKKGTPAWTDLEKHLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVALATDRTVFKV
Ga0070717_116551472	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTKVRILFIAALMAVSSLASAQEAMKKGDKNWNDLEKQLADINDQWVCAHKYHKDHAMDCVDFKNKIWPETFFEVGRQGQVETKQEMVKRQTATAQAHPVSPGDSGPN
Ga0075028_1003543252	3300006050	Watersheds	MRWIRVLFVVALMAVSSLASAQDSMKKGDKGWADLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVALATDHTVFK
Ga0075028_1006409242	3300006050	Watersheds	MVKIRVLFIAALMAVSSLASAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVALATDHTVFK
Ga0075017_1006609572	3300006059	Watersheds	MTKFRLLLVLALMSVAPIAHAQDSMKKGDKAWTDLEKQLADINDYWVCAHKYHKDHAQDCVDSKNKIWPATFFEVSRQGEVTDKLEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYG
Ga0075030_1011204932	3300006162	Watersheds	MTKLRVLLVLAAMTISSLAFGQDAAKKGTPGWTALEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPNTFFEISMQGEVTDKQEMVKRQTATATAKPVSPGDAGPNPQDFKLMAVYGNVALAT
Ga0075030_1012733242	3300006162	Watersheds	MTKFRVLLVALLMACSTMAIAQDSMKKGDKDWVALEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKSQTARASAQPISPGDAGPNPQDFKLMAVYGNVALATDHTVFK
Ga0075018_108236551	3300006172	Watersheds	MSKFRVLLIALLMACSTMAIAQDSMKKGDKDWVALENQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKSQTARATAQPISP
Ga0075014_1003411031	3300006174	Watersheds	MINTRMFVVALLALPSLAFAQDSMKKGDKSWTDLERQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFK
Ga0075014_1005831482	3300006174	Watersheds	MTKFRVLLVALLMACSTMAIAQDSMKKGDKDWVALEKQLADINDQWVCAHKYHKNHAQDCVDFKNMIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPISPGDAGPNP
Ga0075021_103741201	3300006354	Watersheds	MRWIRVLFVVALMAVSSLASAQDSMKKGDKGWADLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPDTFFEISRQGEVTDKQEMVKRQTATATAHP
Ga0068871_1023808351	3300006358	Miscanthus Rhizosphere	MAKLRVLFVLILMGVSSLAMAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNNIWPDKFFEISRQGEITDKQEMVKRQTATATAHPVSPGDAGPNPQDFQLRAVYGNVALATDHTVFKAAD
Ga0079222_109222492	3300006755	Agricultural Soil	MTKIRIFFLIVAMGFAGMVHAQETMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPSTFFEISMQGEVTDKVEMVKRQTATATARPVSPGDAGPNP
Ga0099830_105576861	3300009088	Vadose Zone Soil	MAVSSLALAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDF
Ga0126370_123920001	3300010358	Tropical Forest Soil	MKKIRIPIVILAIAFSCMATRAQEIKKGEKSWTELEKQLADMNDQWVCAHKYHKNHAQDCVDFKNHIWPPAFFEISMQGEVTDKQEMIKRQTKTATERPVSPGDAGPNPQDFKLMAVYGDVALATD
Ga0134128_107848542	3300010373	Terrestrial Soil	MINIRVFVAAVLALPSLAFAQDSMKKGDKSWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVALATD
Ga0137393_106339611	3300011271	Vadose Zone Soil	MRNICLFFAALMAVSSPSFAQDSMKKGDKTWSDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLM
Ga0137393_117685861	3300011271	Vadose Zone Soil	GHEGRSGRPLADEFEKIAEDRIASDLVIPWRRFVMTKIRVLFVAALLAVSSLASAQEAMKKGDKGWAELEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQNFKLMAVYGNVALATDHTVFKAAD
Ga0120139_11298322	3300012019	Permafrost	MTKIRVLFVVALMAVSSLAIAQDSMKKGDKGWTDLEKQLADINNQWVCAYQYHKDHAQDCVDFKNKIWPDAFFEISRQGEVTDKQQMVKRQTATATAPPVS
Ga0137389_100796263	3300012096	Vadose Zone Soil	MTKIRVLFAAALLAVSSLASAQEAMKKGDKGWAELEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNP
Ga0137389_117584291	3300012096	Vadose Zone Soil	MCVFFAAACMTVSSPAFAQDSMKKGDKSWMDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPGTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLM
Ga0137362_102439291	3300012205	Vadose Zone Soil	MRNTRVFFAVALMAVSTLAFAQDSMKKGDKSWADLEKQLADINDQWVCAHNYHKNHAQDCVDFKNQIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPVSP
Ga0137381_114512771	3300012207	Vadose Zone Soil	MAVSSLAFAQDSMKKGDKSWADLEKQLADINDQWVCAHKYHKDHAQDCVDFKNQIWPSTFFEISMQGKVTDKQEMVKRQTATAHPVSPGDAGPNPQDFKLMAVYGNVALATDR
Ga0137377_106247962	3300012211	Vadose Zone Soil	MTKIRVLFVAALIAVSSLASAQEAMKKGDKGWAELEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPGTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDSGPNP
Ga0137386_109114172	3300012351	Vadose Zone Soil	MKIRIFFVVALMAVSSLASAQEVMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISRQGEVTDKQEMVKRQTVTATARPVSPGDAGPNPQDFKLMAVYGDVALATDHTVFKAADA
Ga0137360_101925191	3300012361	Vadose Zone Soil	MKIRILFVVALMAVSSLASAQEVIKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISRQGEVTDKQEMVKRQTATATARPVSPGDAGPNPQDFKLMAVYGDVALATDH
Ga0137360_107858492	3300012361	Vadose Zone Soil	MAISSLACAQETMKKGDKSWTDLEKQLADINDQWVCAHKYHKDHAMDCVDFKNKIWPETFFEVGRQGQVETKQEMVKRQTATAQAHPVSPGDAGPNPQDFKLMAVY
Ga0137390_104014222	3300012363	Vadose Zone Soil	MRNICLFFAALMAVSSPAFAQDSMKKGDKSWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAG
Ga0137395_108113471	3300012917	Vadose Zone Soil	MTKVRILFVAALMAISSLACAQETMKKGDKSWTDLEKQLADINDQWVCAHKYHKDHAMDCVDFKNKIWPETFFEVGRQGQVETKQEMVKRQTATAQAHPVSPGDAGP
Ga0137395_110776201	3300012917	Vadose Zone Soil	VADNHEEIVEHHSASDIVAPRRRLIMTRVRVLFVVAFMAVSSLAFAQDAVKKDDKSWTDLEKQLVDINDQWVCAHKYHKNHAQDCVDFKNKIWPDTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAG
Ga0137395_111529662	3300012917	Vadose Zone Soil	MTKIRVLFVMALMAVSSVVFAQDTVKKGTQGWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISMQGEVTDKQEMVKKQTATATAHPVSPGDAGPNPQEFKLMAVYGNVALA
Ga0137416_118366461	3300012927	Vadose Zone Soil	MKIRIFFVVALMAVSSLASAQEVMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISRQGEVTDKQEMVKRQTATATARPVSPGDAGPNPQDFKLMAVYGDVALATDHTV
Ga0137404_103865971	3300012929	Vadose Zone Soil	MTKVRILFVAALMAISSLACAQETMKKGDKGWTDLEKQLADINDQWVCAHKYHKDHAMDCVDFKNKIWPETFFEVGRQGQVETKQEMVKRQTATAQAHPVSPADSGPNPQ
Ga0137404_107562451	3300012929	Vadose Zone Soil	MTKIRALFVMALMAVSSLAFAQDAVKKGTQGWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISMQGEVTDKQEMVKRQTATATTRPVSPGDAGPNPQDFKLMAVYGNVALATDRTVFKIA
Ga0137410_104071082	3300012944	Vadose Zone Soil	MTKIRVLFVMALMAVSSAAFAQDAVKKGTQGWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPNTFFEISMQGEVTDKQEMVKRQTATATARPVSPGDAGPNPQDF
Ga0137410_120813501	3300012944	Vadose Zone Soil	MTKLRVLFVVALMTVSSLAHAQDSMKKGDKAWTELERQLADINNQWVCAHKYHKDHAQDCVDFKNNIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVAMATDHTVFKAAD
Ga0164303_108149442	3300012957	Soil	MTKIRVLILIFAMGFSCMAHAQEGMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPPAFFEISMQGEVTDKNEMVKRQTATATAHPVSPGDAGPNP
Ga0164302_111667771	3300012961	Soil	MTKIRVLILIFALGFSCMAHAQEGMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPPSFFEISMQGEVTDKNEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGDVALATDHTVFKAADEKGN
Ga0164309_104126362	3300012984	Soil	MTKIRVLILIFAMGFSCMAHAQEGMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPPSFFEISMQGEVTDKNQRVTRQTATATAHPVSPGDAGPNPQDFKLMAVYGDVALA
Ga0164304_114691162	3300012986	Soil	MAKLRVLFVLILMGVSSLAMAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNNIWPDKFFEISRQGEITDKQEMVKRQTATATAHPVSPGDAGPNPQDFQLRAV
Ga0157374_111407971	3300013296	Miscanthus Rhizosphere	MTKIRVLILIFALGFSCMAHAQEGMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPPSFFEISMQGEVTDKNEMVKRQTATATAHPVSPGDAGPNPQDFK
Ga0120125_10715121	3300014056	Permafrost	MTKIRVLFVVALMAVSSLAIAQDSMKKGDKSWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVALATD
Ga0181526_106024451	3300014200	Bog	MMKIRLLFVVALMAVASFAHAQDSMKKGDKAWTDLEKQLADVNDYWVCAHKYHKDHAQDCVDSKNAIWPDTFFEVGRKGEVTDKQEMVKSQTARAAATPVMPGDSGPNPQDFKLMAVYGNVALATDHTV
Ga0182024_113020241	3300014501	Permafrost	VAEEFEKVEVADVRRAFHIVPLGRRLAMTWIRVPLVLALMAVSSLAVAQDSMKKGDKGWADLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLM
Ga0137418_103982212	3300015241	Vadose Zone Soil	MTKIRVLFVMVLMGVSSLAFAQDAVKKGTQGWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISMQGEVTDKQEMVKRQTATATAHPASPGDAGQSQSPASSV*
Ga0137409_102384451	3300015245	Vadose Zone Soil	MTKIRTLFLILAMGFSGMVHAQEGMKKGDKSWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPSTFFEISMQGEVTDKAEMVKRQTATATTRPVSPGDAGPNPQDFNL
Ga0182035_101336051	3300016341	Soil	MKDVFFAVALMSLSFPVLAQDSMQKGDKSWTELEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNP
Ga0182035_121826351	3300016341	Soil	MRHVFFVVALMSLSSPVLAQDSMQKGHKSWTELEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPSTFFEVSRQGEVTDKEEMVKRQTATATAHPVSPGDAGPNPQDF
Ga0182040_103072372	3300016387	Soil	MRNVFFAVALMSLSSPVFAQDSMQKGDKSWTELEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGSVA
Ga0182037_100110891	3300016404	Soil	MRDVFFAVALLSLSSPMLAQDSMQKGDKSWTELEKHLADINDQWVCAHKYHKNHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGSVA
Ga0182037_120578271	3300016404	Soil	MKDVFFAVALMSLSSPVLAQDAMQKGDKSWTELEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGS
Ga0182038_119261922	3300016445	Soil	MRDVFFAVALLSLSSPMLAQDSMQKGDKSWTELEKHLADINDQWVCAHKYHKSHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGSVA
Ga0187825_101586752	3300017930	Freshwater Sediment	MAKFRLLLLVVLMAVSSLAFAQDTMKKGDKGWTDLEKTLADVNNQWICAYKYHKSRAQDCVDFKSQFWPDTFFEISRQGEVTDKMEMVKRQTATATAHPV
Ga0187825_101682282	3300017930	Freshwater Sediment	MKWIRVLFVVALMAVPSLGSAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDKFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNP
Ga0187821_101752871	3300017936	Freshwater Sediment	MTRIRVVFVMALLAVSSAAFAQDAVKKGTPAWTDLEKHLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGDVA
Ga0187817_103756961	3300017955	Freshwater Sediment	MRNMRVFVAAALMTAALPAFAQDSIKKGDKGWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVALATDHT
Ga0179592_104826002	3300020199	Vadose Zone Soil	MTKIRILFVVALIAISSLASAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKL
Ga0210407_113247132	3300020579	Soil	MTKIRVLIAVALMTVSSLAIAQDSMKKGDQGWTDLEKQLADINDQWVCAHQYHKNHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQSATAAARPVSPGDAGP
Ga0210403_101693571	3300020580	Soil	MTKIRVLFVVALMAVSSMASAQEAMKKGDKSWTELEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEVGRQGQIETKQEMVKRQAATATAHPVSPGDAGPNPQDFKLMAV
Ga0210403_110178152	3300020580	Soil	MTKVRILLVAALMAVSSFASAQETMKKGDKSWTDLEKQLADINDQWVCAHKYHKDHAMDCVDFKNKIWPETFFEVGRQGQVETKQEMVKRQSATAQAHPVSPGDSGPNPQDFKLMAVYGNVALATDH
Ga0210399_104002061	3300020581	Soil	MRWIRVLLVVALMAISSLASAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPDTFFEISRQGEVTDKQEMVKRQTATATVHPISPGDAGPNPQDFKLMAVYGNVAL
Ga0210399_113136872	3300020581	Soil	MTKTRVLFVVLLMAVSSRAVAQDAMKKGDSSWVALETELSDINNQWVCAHKYHKNHAQDCVDFKNRIWPDTFFEISMQGEVTDKNEMIKRQTATATAHPDSPGDAGPNPQDFKLMAVHGNVALA
Ga0210399_115568682	3300020581	Soil	MTKIRVLIAVALMTVSSLAIAQDSMKKGDQGWTDLEKQLADINDQWVCAHQYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQSATAAARPVSPGDAGPNPQDFKLKAVYG
Ga0210401_114143201	3300020583	Soil	MTKLRIAFLILAMGFAGIVHAQEAMKKGDQAWTDLEKQLADINNQWVCAHKYHKDHAQDCVDFKNSVWPSTFFEVSMQGEVTDKAEMVKRQTATATAHPTSPGDAGPNPQDFQ
Ga0215015_101459911	3300021046	Soil	MTKIRILLVVGLMAVSSLAFAQDSMKKGDKAWTDLEKQLADINDQWVCAHQYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVALATDHTVFNCLLYT
Ga0210400_100245924	3300021170	Soil	MTKVRILLVAALMAVSSFASAQETMKKGDKSWTDLEKQLADINDQWVCAHKYHKDHAMDCVDFKNKIWPETFFEVGRQGQVETKQEMVKRQSATAQAHPVSPGDSGPNPQDFKLMAVYGNVALATDHTVFKAADA
Ga0210400_105988361	3300021170	Soil	MTRIRILFVILALSLSCMAHAQEGMKKGDKNWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPAGFFEISMQGEVTDKNEMVKRQTATATAHPVSPGDAGPNPQDFELRAVYGNVALATDRTVFKVADEKGNIS
Ga0210405_108532682	3300021171	Soil	MKWIRVPLILALMTFSSLAIAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNMIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAV
Ga0210394_104415612	3300021420	Soil	MTKIRILFVLGLMTVSSLAFGQDAVKKGTPGWTDLEKKLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISMQGEVTDKREMVKRQTATATARPVSPGDAGPNPQDFKLMA
Ga0210384_100924261	3300021432	Soil	MRNICVFFATALIAVSSPAFGQDSMKKGDKSWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGD
Ga0210384_106138702	3300021432	Soil	MTKIRVLIAVALMTVSSLAIAQDSMKKGDQGWTDLEKQLADINDQWVCAHQYHKNHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQSATAAARPVSPGDAGPNP
Ga0210409_115616871	3300021559	Soil	MTKLRILFVVVLMAVSSLASAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPN
Ga0210409_116629921	3300021559	Soil	LAHGFEVYQILSLSERPAWMPENYDRVAVVAGTSSFVTLWRRLVMRNIVVLCVAALMAVSSLAFAQDTMKKGDKSWADLEKQLADINDQWVCAHKYHKDHAQDCVDFKNQIWPGTFFEISMQGEVTDKQEMVKRQTATATAHPISPGDAGPNPQDFKLMAVYGNIALATDR
Ga0126371_119118582	3300021560	Tropical Forest Soil	MKKIRIPIVILAIAFSCMATRAQEIKKGEKSWTELEKQLADMNDQWVCAHKYHKNHAQDCVDFKNHIWPPAFFEISMQGEVTDKQEMIKRQTKTATERPVSPGDAGPNPQDFKLMAVYGDVALAT
Ga0242665_102083581	3300022724	Soil	MTKIRMLFVIALMAISSLANAQESMKKGDKAWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGDVALATDHTVF
Ga0207710_101489591	3300025900	Switchgrass Rhizosphere	MIAMAKLRVLFVLILMGVSSLAMAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPPSFFEISMQGEVTDKNEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGDV
Ga0207700_117597272	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTKVRILFIAALMAVSSLASAQEAMKKGDKNWNDLEKQLADINDQWVCAHKYHKDHAMDCVDFKNKIWPETFFEVGRQGQVETKQEMVKRQTATAQAHPVSPGDSGPNPQDFKLMAVYGDVALATDH
Ga0207703_106823802	3300026035	Switchgrass Rhizosphere	MTKIRVLILIFALGFSCMAHAQEGMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPPSFFEISMQGEVTDKNEMVKRQTATATAHPVSPGDAG
Ga0209131_11367812	3300026320	Grasslands Soil	MKIRIFFVVALMAVSSLASAQEVMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISRQGEVTDKQEMVKRQTATATARPVSPGDAGPNPQAFKLMAVYGDVALATDHTVFK
Ga0257158_10406162	3300026515	Soil	MKIRIFFVVALMAVSSLVSAQEVMKKGDKTWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISRQGEVTDKQEMVKRQTATATARPVSPGDAGPNPQDFKLMAVYGDVALA
Ga0179593_10218281	3300026555	Vadose Zone Soil	MKIRIFFVVALMAVSSLASAQEVMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISRQGEVTDKQEMVKRQTATATARPVSPGDAGPNPQDFKLMAVYGDVAL
Ga0208993_10330492	3300027480	Forest Soil	MKIRIFFVVALMAVSSLASAQEVMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISRQGEVTDKQEMVKRQTATATARPVSPGDAGPNPQDFKLMAVYGDVALATDHTVFKA
Ga0209179_11056412	3300027512	Vadose Zone Soil	MTKIRVLFVMALMAVSSLAFAQDAVKKGTQGWTDLEKQLADINDQWVCAHKYHKDHAMDCVDFKNKVWPETFFEVGRQGQVETKQEMVKRQTATAQAHPVS
Ga0209220_11101082	3300027587	Forest Soil	MTKIRVLFVVALMAVSSLASAQEAMKKGDKSWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEVGRQGQVEDKAEMVKRQTATAAAHPVSPGDAGPNPQDFKL
Ga0209528_11035871	3300027610	Forest Soil	VADKYQKIVRVSAALDITIAWGKLVMTKIRVLFVVALMAVSSLASAQEAMKKGDKSWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGDVALAT
Ga0209333_11728351	3300027676	Forest Soil	MTKIRILLVILAMSLSCMVHAQEGMKKGDKAWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNHIWPAGFFEISMQGEVTDKNEMVKRQTATATAH
Ga0209328_100977401	3300027727	Forest Soil	MTKIRILFVAALMAVSSFASAQETMKKGDKGWTDLEKQLADVNDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEVSRQGKVEDKQEMVKRQTATATAKPISPGDAGPNPQDFKLM
Ga0209580_101314511	3300027842	Surface Soil	MTRIRVVFVMALLAVSSAAFAQDAVKKGTPAWTDLEKHLADINDQWVCAHKYHKNHAQDCVDFKNSIWPDTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVALATDRTVFKVA
Ga0209580_101492452	3300027842	Surface Soil	MVKIRVLFIAALMAVSSLASAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPDTFFEISRQGEVTDKQEMVKRQTATATARPVSPGDAGPNPQDFKLMAVYGNVALA
Ga0209580_104149442	3300027842	Surface Soil	MRNIRVLCVVALAAVSSLAFAQDSIKKGDKGWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPV
Ga0209166_102514602	3300027857	Surface Soil	MTKFRIAFLILAMAFAGMAHAQEGMKKGDKAWNDLEKELADINNQWVCAHKYHKDHAQDCVDFKNHIWPSTFFEVSMQGEVTDKMEMVKRQTATATAHPVSPGDAGPNPQDFHLRAVYGVVAMATDHTVFKA
Ga0209275_104144741	3300027884	Soil	MKWIRVLLVVALMGVSSLAVAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKDRAQDCVDFKNNIWPDTFFEISRQGEVTDKHEMVKRQTATATAHPVSPGDAGPN
Ga0209488_103028732	3300027903	Vadose Zone Soil	MTKIRVLFVAALIAVSSLASAQEAMKKGDKGWAELEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQNFKLMA
Ga0209488_103780711	3300027903	Vadose Zone Soil	ILFVAALMAISSLACAQETMKKGDKGWTDLEKQLADINDQWVCAHKYHKDHAMDCVDFKNKIWPETFFEVGRQGQVETKQEMVKRQTATAQAHPVSPGDSGPNPQTSS
Ga0209698_107579591	3300027911	Watersheds	MRYIHLFFATALIATSFPAFAQDSMKKGDKGWTELEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPDLFFEISRQGEVTDKQEMVKRQTATATAHPIS
Ga0209698_109310861	3300027911	Watersheds	MTKFRVLLVALLMACSTMAIAQDSMKKGDKDWVALEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKSQTARATAQPISPGDAGPNPQDFKLMAVYGN
Ga0209526_102374831	3300028047	Forest Soil	MTKIRMLFVIALMAISSLANAQESMKKGDKAWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFK
Ga0307504_100096213	3300028792	Soil	MRWIRVLFVLALMAVSSLAMAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVALATDHTVFKAAD
Ga0308309_108708381	3300028906	Soil	MKWMIRVVLVVALIGVSSLAIAQDSTKKGDKGWTDLEKQLADINDQWVCAHKYHKYHTQDCVDFKNSVWPDTFFEISRQGEVTDKQEMIKRQTATATARPVSLGDAGPN
Ga0170834_1085197642	3300031057	Forest Soil	MLKIRVFLIASFMAVSSLAMAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNRIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMA
Ga0307474_101066533	3300031718	Hardwood Forest Soil	MKKLSMIFVLALLSVAPMAHAQETMKKGDKAWTDLEKQLADVNDYWVCAHKYHKDHAQDCVDSKNKIWPSTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVY
Ga0306918_112144811	3300031744	Soil	MRHVFFVVALMSLSSPVLAQDSLQKGHKSWTELEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGSVALATDRTVFKVADASGKI
Ga0318494_105963601	3300031751	Soil	MRDVFFAVALLSLSSPMLAQDSMQKGDKSWTELEKHLADINDQWVCAHKYHKSHAQDCVDFKNHIWPSTFFEVSRQGEVTDKLEMVKRQTATATAHPISPGDAG
Ga0307477_101108913	3300031753	Hardwood Forest Soil	MKIRVLFLTALMAVSSLAIAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAIYG
Ga0307475_101094202	3300031754	Hardwood Forest Soil	MRNICVFFATALIAVSSPAFGQDSMKKGDKSWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKL
Ga0307475_103751631	3300031754	Hardwood Forest Soil	MKIRVLFLTALMAVSSLAIAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAIYGNVALATDHTVFIA
Ga0318576_103317721	3300031796	Soil	MRDVFFAVALLSLSSPMLAQDSMQKGDKSWTELEKHLADINDQWVCAHKYHKSHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGSVALATDRTVFKVADAS
Ga0307473_103621191	3300031820	Hardwood Forest Soil	MRRIRVLFVLALMAVSSLAMAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGNVALATDRTVFK
Ga0307473_105713931	3300031820	Hardwood Forest Soil	MRNARAVFAVALMAVSSLAFAQDSMKKGDKGWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNQIWPSTFFEISMQGEVTDKQEMVKRQTATATAHPVSPGDAGPN
Ga0307473_107780661	3300031820	Hardwood Forest Soil	MTKIRLLLVIALMAVSSLASAQDSMKKGDKSWTDFEKQLADINDQWVCAHKYHKDHAQDCVDFKNKIWPDTFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLRAVYGDVALATDH
Ga0307473_114563022	3300031820	Hardwood Forest Soil	MTKIRILFLIVAMGFAGMVHAQETMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPSTFFEISMQGEVTDKAEMVKRQTATATARPVSPGDAG
Ga0307478_114067211	3300031823	Hardwood Forest Soil	MTRIRILFVILALCVSCMAHAQEGMKKGDKNWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNSIWPAGFFEISMQGEVAGKDEMVKRQTATATARPVSTGDAGP
Ga0310917_101181131	3300031833	Soil	MRDVFFAVALLSLSSPMLAQDSMQKGDKSWTELEKQLADINDQWVCAHKYHKNHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLM
Ga0306925_105459862	3300031890	Soil	MRDVFFAVALLSLSSPMLAQDSMQKGDKSWTELEKHLADINDQWVCAHKYHKSHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGSVALATDRT
Ga0318531_104862561	3300031981	Soil	MRDVFFAVALLSLSSPMLAQDSMQKGDKSWTELEKHLADINDQWVCAHKYHKSHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGSVALA
Ga0310911_102877871	3300032035	Soil	MRDVFFAVALLSLSSPMLAQDSMQKGDKSWTELEKHLADINDQWVCAHKYHKNHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGP
Ga0318545_101927331	3300032042	Soil	MRDVFFAVALMSLSFPVLAQDSMQKGDKSWTELEKQLADINDQWVCAHKYHKSHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGSVALA
Ga0318505_104639281	3300032060	Soil	MRDVFFAVALLSLSSPMLAQDSMQKGDKSWTELEKHLADINDQWVCAHKYHKSHAQDCVDFKNHIWPSTFFEVSRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFKLMAVYGSVALATDRTVFKVADASGK
Ga0307471_1027657292	3300032180	Hardwood Forest Soil	MAERHEKVGVAEDRGIPISFLQKRLAMMKIRVLFLTALMAVSSLAIAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKNQAQDCVDFKNKIWPDTFFEVGRQGQIETKQEMVKRQSATAAAHPASPGDAGPNPQDFKLMAVYGDVA
Ga0310811_107812321	3300033475	Soil	MIAMAKLRVLFVLILMGVSSLAMAQDSMKKGDKAWTDLEKQLADINDQWVCAHKYHKNHAQDCVDFKNNIWPEKFFEISRQGEVTDKQEMVKRQTATATAHPVSPGDAGPNPQDFQLRAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070507

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences