Metagenome / Metatranscriptome Family F070519

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070519
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	55 residues
Representative Sequence	LFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR
Number of Associated Samples	112
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.63 %
% of genes near scaffold ends (potentially truncated)	97.56 %
% of genes from short scaffolds (< 2000 bps)	87.80 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.935 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.886 % of family members)
Environment Ontology (ENVO)	Unclassified (26.016 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.537 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.68% β-sheet: 0.00% Coil/Unstructured: 54.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF12439	GDE_N	78.86
PF00106	adh_short	2.44
PF07992	Pyr_redox_2	0.81
PF04392	ABC_sub_bind	0.81
PF00510	COX3	0.81
PF01654	Cyt_bd_oxida_I	0.81
PF13610	DDE_Tnp_IS240	0.81
PF00732	GMC_oxred_N	0.81
PF05514	HR_lesion	0.81
PF07228	SpoIIE	0.81
PF13358	DDE_3	0.81
PF00067	p450	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.81
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	0.81
COG2124	Cytochrome P450	Defense mechanisms [V]	0.81
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.81
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.93 %
Unclassified	root	N/A	4.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.93 %
Unclassified	root	N/A	4.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.93 %
Unclassified	root	N/A	4.07 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	87.80 %
Unclassified	root	N/A	4.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	67.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.76 %
Unclassified	root	N/A	4.07 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	59.35 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	7.32 %
Unclassified	root	N/A	4.07 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.35 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	7.32 %
Unclassified	root	N/A	4.07 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.35 %
Nitrosococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	4.88 %
Unclassified	root	N/A	4.07 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.35 %
Unclassified	root	N/A	4.07 %
Nitrosococcus watsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus watsonii	2.44 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10053829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1041	Open in IMG/M
3300000956\|JGI10216J12902_109218707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	823	Open in IMG/M
3300001431\|F14TB_100218681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus watsonii	801	Open in IMG/M
3300002568\|C688J35102_119218173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	656	Open in IMG/M
3300004152\|Ga0062386_101369918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus watsonii	589	Open in IMG/M
3300004156\|Ga0062589_101848250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	608	Open in IMG/M
3300004268\|Ga0066398_10050575	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300005093\|Ga0062594_101138540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	767	Open in IMG/M
3300005171\|Ga0066677_10647980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300005332\|Ga0066388_100231922	All Organisms → cellular organisms → Bacteria	2479	Open in IMG/M
3300005438\|Ga0070701_11267529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300005455\|Ga0070663_100021782	All Organisms → cellular organisms → Bacteria	4269	Open in IMG/M
3300005456\|Ga0070678_102153169	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300005468\|Ga0070707_100977535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	812	Open in IMG/M
3300005536\|Ga0070697_100150357	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300005546\|Ga0070696_100127512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1848	Open in IMG/M
3300005557\|Ga0066704_10059622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2431	Open in IMG/M
3300005576\|Ga0066708_10048259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2373	Open in IMG/M
3300005713\|Ga0066905_100707180	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300005719\|Ga0068861_102213277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus watsonii	551	Open in IMG/M
3300005764\|Ga0066903_103357320	All Organisms → cellular organisms → Bacteria → Proteobacteria	864	Open in IMG/M
3300006032\|Ga0066696_10022945	All Organisms → cellular organisms → Bacteria → Proteobacteria	3236	Open in IMG/M
3300006172\|Ga0075018_10350783	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300006173\|Ga0070716_100615716	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300006175\|Ga0070712_100717059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	854	Open in IMG/M
3300006791\|Ga0066653_10592655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300006852\|Ga0075433_11129131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	681	Open in IMG/M
3300009100\|Ga0075418_10072361	All Organisms → cellular organisms → Bacteria	3672	Open in IMG/M
3300009176\|Ga0105242_13269974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300009840\|Ga0126313_11009792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300010038\|Ga0126315_10781159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300010043\|Ga0126380_10172051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1416	Open in IMG/M
3300010048\|Ga0126373_10114980	All Organisms → cellular organisms → Bacteria	2509	Open in IMG/M
3300010048\|Ga0126373_11277605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300010048\|Ga0126373_12468649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300010167\|Ga0123353_12771619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300010359\|Ga0126376_12206098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300010360\|Ga0126372_10803517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300010361\|Ga0126378_11742565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	708	Open in IMG/M
3300010366\|Ga0126379_10129141	All Organisms → cellular organisms → Bacteria → Proteobacteria	2313	Open in IMG/M
3300010366\|Ga0126379_11824999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300010366\|Ga0126379_12361332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300010376\|Ga0126381_102063048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300010376\|Ga0126381_103453240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300010376\|Ga0126381_104759818	Not Available	522	Open in IMG/M
3300010397\|Ga0134124_11334526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300010398\|Ga0126383_11899817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300010400\|Ga0134122_10805673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300011106\|Ga0151489_1170597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	956	Open in IMG/M
3300012200\|Ga0137382_11301998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300012358\|Ga0137368_10106339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2163	Open in IMG/M
3300012360\|Ga0137375_10152307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2257	Open in IMG/M
3300012362\|Ga0137361_10511674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1103	Open in IMG/M
3300012896\|Ga0157303_10318877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300012912\|Ga0157306_10134646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300012948\|Ga0126375_11280725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300012971\|Ga0126369_10278892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1661	Open in IMG/M
3300012975\|Ga0134110_10004976	All Organisms → cellular organisms → Bacteria → Proteobacteria	4918	Open in IMG/M
3300012988\|Ga0164306_10615780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300014318\|Ga0075351_1127287	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300014325\|Ga0163163_11637768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300014326\|Ga0157380_13350974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300015359\|Ga0134085_10035539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1956	Open in IMG/M
3300016294\|Ga0182041_10313817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1304	Open in IMG/M
3300016319\|Ga0182033_11572094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300016357\|Ga0182032_10579678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	931	Open in IMG/M
3300017939\|Ga0187775_10055220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1224	Open in IMG/M
3300018482\|Ga0066669_10124695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1842	Open in IMG/M
3300020004\|Ga0193755_1062890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1205	Open in IMG/M
3300020581\|Ga0210399_10714662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300020583\|Ga0210401_11197650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300021374\|Ga0213881_10369296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300021407\|Ga0210383_10848412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300021444\|Ga0213878_10085410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1269	Open in IMG/M
3300022756\|Ga0222622_10597186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300025899\|Ga0207642_10897748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	568	Open in IMG/M
3300025915\|Ga0207693_11185707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300025929\|Ga0207664_11555444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300025949\|Ga0207667_11836008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300026118\|Ga0207675_102102306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	581	Open in IMG/M
3300026320\|Ga0209131_1011389	All Organisms → cellular organisms → Bacteria	5507	Open in IMG/M
3300026327\|Ga0209266_1054391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1950	Open in IMG/M
3300026547\|Ga0209156_10365131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300027523\|Ga0208890_1050201	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300028047\|Ga0209526_10845264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300028710\|Ga0307322_10052079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1000	Open in IMG/M
3300028717\|Ga0307298_10020904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1697	Open in IMG/M
3300028754\|Ga0307297_10096775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	966	Open in IMG/M
3300028872\|Ga0307314_10157250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300028876\|Ga0307286_10368237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300028878\|Ga0307278_10119561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1183	Open in IMG/M
3300031199\|Ga0307495_10075171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	751	Open in IMG/M
3300031544\|Ga0318534_10315560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300031708\|Ga0310686_104458424	Not Available	592	Open in IMG/M
3300031719\|Ga0306917_10139770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1786	Open in IMG/M
3300031719\|Ga0306917_10357910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1135	Open in IMG/M
3300031719\|Ga0306917_11217249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300031719\|Ga0306917_11597138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300031723\|Ga0318493_10012324	All Organisms → cellular organisms → Bacteria → Proteobacteria	3580	Open in IMG/M
3300031740\|Ga0307468_101374467	Not Available	647	Open in IMG/M
3300031744\|Ga0306918_10478033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	975	Open in IMG/M
3300031768\|Ga0318509_10000834	All Organisms → cellular organisms → Bacteria → Proteobacteria	9775	Open in IMG/M
3300031833\|Ga0310917_10195758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1350	Open in IMG/M
3300031835\|Ga0318517_10069015	All Organisms → cellular organisms → Bacteria → Proteobacteria	1514	Open in IMG/M
3300031859\|Ga0318527_10330953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300031897\|Ga0318520_10711757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300031912\|Ga0306921_11687437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300031941\|Ga0310912_10234919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1408	Open in IMG/M
3300031942\|Ga0310916_11279457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300031945\|Ga0310913_11134584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300031946\|Ga0310910_11433879	Not Available	531	Open in IMG/M
3300031954\|Ga0306926_11703386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300031954\|Ga0306926_12310926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300031981\|Ga0318531_10574535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300032025\|Ga0318507_10246131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300032039\|Ga0318559_10184740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	956	Open in IMG/M
3300032042\|Ga0318545_10262779	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300032060\|Ga0318505_10218482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300032076\|Ga0306924_11850522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300032090\|Ga0318518_10524429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300032261\|Ga0306920_100086586	All Organisms → cellular organisms → Bacteria → Proteobacteria	4617	Open in IMG/M
3300033289\|Ga0310914_11652008	Not Available	544	Open in IMG/M
3300033289\|Ga0310914_11790155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.24%
Host-Associated	Host-Associated	9.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.80%
Plants	Host-Associated → Plants	8.94%
Aquatic	Environmental → Aquatic	2.44%
Arthropoda	Host-Associated → Arthropoda	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.06%
Sediment	Environmental → Aquatic → Sediment	1.63%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.81%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.36%
Loam	Environmental → Terrestrial → Soil → Loam	13.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.81%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.25%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.81%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.63%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.81%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010167	Labiotermes labralis P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P3	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100538291	3300000597	Forest Soil	LLFVFYVIVTAVLFHNFWSFPFNSDQWNQNFWPFLKNFGLADGFLYVAADAQMGSLRSAFSVKPR*
JGI10216J12902_1092187072	3300000956	Soil	HNFWSFPFNSNEWSQNFWPFLKNFGLAGGFLYVAGCAGMTSLRDAFSLKAR*
F14TB_1002186812	3300001431	Soil	FVFYVIATAVLFHNFWSFPFNGDQWNQNFWPFLKNFGLAGGFLYIAADARVRSLRTAFSLKPR*
C688J35102_1192181731	3300002568	Soil	LFHNFWSFPFNSDAWNENFWPFLKNFGLAGGFLYIAADAKMESLRGAFSLSPREAQK*
Ga0062386_1013699181	3300004152	Bog Forest Soil	VIATAVLFHNFWSFSFNGDEWNQNFWPFLKNFGLVGGFLYIATDAKMQPLRDAFSLNPR*
Ga0062589_1018482502	3300004156	Soil	TAVLFHNFWSFPFNGDDWNQNFWPFLKNFGLAGGFLYIAADARMQPLRGAFSLSPR*
Ga0066398_100505752	3300004268	Tropical Forest Soil	FPFNGDAWNENFWPFLKNFGLAGGFLYIAADAKMQSLRGAFSFNPREAQK*
Ga0062594_1011385401	3300005093	Soil	FWSFPFNGDDWNQNFWPFLKNFGLAGGFLYIAADARMQPLRGAFSLSPR*
Ga0066677_106479802	3300005171	Soil	LFHNFWSFPFGSDSWTQNFWPFLKNLGLAGGFLYVAADARLSSLRDAFSLSSR*
Ga0066388_1002319221	3300005332	Tropical Forest Soil	VATAVLFHNFWSFPFNGDAWNENFWPFLKNFGLAGGFLYIASDAKMQSLRGAFSFSPREAQK*
Ga0070701_112675291	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	FHNFWSFPFNSEPWTENFWPFLKNLGLAGGFLYIAADARMQSLREAFSLKAR*
Ga0070663_1000217823	3300005455	Corn Rhizosphere	VIATAVLFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR*
Ga0070678_1021531692	3300005456	Miscanthus Rhizosphere	PFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR*
Ga0070707_1009775351	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	WSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDALSLNPR*
Ga0070697_1001503572	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	IATAVLFHNFWSFSFNGEEWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR*
Ga0070696_1001275122	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VLFHNFWSFPFNSDGWTQNFWPFLKNFGLAGGFLYVAGCAEMTSLRGAFSLKPR*
Ga0066704_100596221	3300005557	Soil	FYVVVTAVLFHNFWSFPFGSDSWTQNFWPFLKNLGLAGGFLYVAADARLSSLRDAFSLSSR*
Ga0066708_100482592	3300005576	Soil	FPFASDSWTQNFWPFLKNLGLAGGFLYVAADARPSSLRDAFSLSSR*
Ga0066905_1007071801	3300005713	Tropical Forest Soil	VALLFMFYVIVTALLGHNYWSFPVNGNAWDQNFWPFFKNFRVVGGILRIAADAGMRSLRGTFSWT
Ga0068861_1022132771	3300005719	Switchgrass Rhizosphere	VLFHNFWSFSFNGEEWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR*
Ga0066903_1033573202	3300005764	Tropical Forest Soil	VTAVLFHNFWSFPFNSNEWSQNFWPFLKNFGLAGGFLYVAGCAGMTSLRDAFSFKAR*
Ga0066696_100229451	3300006032	Soil	FYVVVTAVLFHNFWSFPFASDSWTQNFWPFLKNLGLAGGFLYVAADARLSSLRDAFSLSSR*
Ga0075018_103507831	3300006172	Watersheds	FYVIVTAVLFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFFYIAGDAKMGSLRGAFSLNPR*
Ga0070716_1006157162	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RRQAALLFVFYVIATAVLFHNFWSFPLYSDEWTQNFWPLLKNFGLAGGFLYVAGCAEMTSLREAFSLKPR*
Ga0070712_1007170592	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VVVTAILFHNFWSFPFNGDEWTQNFWPFLKNFGLAGGFLYVAGDAEMRSLRGAFSLKPR*
Ga0066653_105926552	3300006791	Soil	VLTAVLFHNFWSFPFASDSWTQNFWPFVKNLGLAGGFLYVAADARPSSLRDAFSLSSR*
Ga0075433_111291312	3300006852	Populus Rhizosphere	HNFWSFPFNSDGWTQNFWPFLKNFGLAGGFLYVAGCAEMTSLRGAFSLKPR*
Ga0075418_100723611	3300009100	Populus Rhizosphere	TAVLFHNFWSFSFNGEEWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR*
Ga0105242_132699742	3300009176	Miscanthus Rhizosphere	VIATAVLFHNFWSFPFNGDAWNQNFWPFLKNVGLAGGFLYIAADAKMQSLRDAFSLNPR*
Ga0126313_110097922	3300009840	Serpentine Soil	LFHNFWSFPFNGDAWNHNFWPFLKNFGLAGGFLYVAADAKMQSLRDAFSLNPR*
Ga0126315_107811591	3300010038	Serpentine Soil	VLFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQPLHGAFSLSPR*
Ga0126380_101720511	3300010043	Tropical Forest Soil	FPFNSDQWSQNFWPFLKNFGLVGGFLYVAADAQMGSLRSAFSLKPR*
Ga0126373_101149801	3300010048	Tropical Forest Soil	LFIFYVVATAVLFHNFWSFPFNGDAWNENFWPFLKNFGLAGGFLYIASDAKMQSLRGAFSFSPREAQK*
Ga0126373_112776051	3300010048	Tropical Forest Soil	NFWSFPFNGDAWNENFWPFLKNFGLAGGFLYIAADAKMQSLRGAFSFNPREAQK*
Ga0126373_124686492	3300010048	Tropical Forest Soil	FNGDAWNENFWPFLKNFGLAGGFLYIAADAKMQSLRGAFSFSPREAQK*
Ga0123353_127716192	3300010167	Termite Gut	FNGDAWNENFWPFLKNFGLAGGFLYIIADARMQSLRGAFSFSPREAQK*
Ga0126376_122060982	3300010359	Tropical Forest Soil	FHNFCSFPFNGDVWNENFWPFLKNIGLAGGFLYIAADAKMQSLRGAFSLSPREAQ*
Ga0126372_108035172	3300010360	Tropical Forest Soil	FIFYVVATAVLFHNFWSFPFNGDAWNENFWPFLKNLGLAGGFLYIAADGEMESLRGAFSLSPR*
Ga0126378_117425652	3300010361	Tropical Forest Soil	VLFHNFWSFPFNNDQWNQNFWPFLKNFGLAGGFLYIAADAQMSSLRGGFSLQPR*
Ga0126379_101291414	3300010366	Tropical Forest Soil	AVLFHNFWSFPFNSDGWNQHFWEFLKNLGLAGGFLYIATEATMQPLRDAFSMQAQ*
Ga0126379_118249992	3300010366	Tropical Forest Soil	HNFWSFPFNGDAWNENFWPFLKNFGLAGGFLYIASDAKMQSLRGAFSFSPREAQK*
Ga0126379_123613321	3300010366	Tropical Forest Soil	TAVLFHNFWSFPFNSDQWSQNFWPFLKNFGLAGGFLYVAADAQMGSLRSAFSLKPR*
Ga0126381_1020630482	3300010376	Tropical Forest Soil	WSFPFNGDAWNNNFWPFLKNFGLAGGFLYIAADARMESLRGAFSLSPR*
Ga0126381_1034532401	3300010376	Tropical Forest Soil	AILFHNFWSFPFNSDAWNENFWPFLKNFGLAGGFLYIAADAKMESLHGAFSLSPREAQK*
Ga0126381_1047598182	3300010376	Tropical Forest Soil	FPFNSNGWNQHFWEFLKNFGLAGGFLYIATEAKMQSLRDAFSMRAQ*
Ga0134124_113345261	3300010397	Terrestrial Soil	NFWSFPFNREPWTENFWPFLKNLGLAGGFLYIAADARMQSLREAFSLKAR*
Ga0126383_118998172	3300010398	Tropical Forest Soil	FPFNGDAWNENFWPFLKNFGLAGGFLYIAADAKMQSPRGAFSFSPREAQK*
Ga0134122_108056732	3300010400	Terrestrial Soil	LFHNFWSFPFNGDDWNQNFWPFLKNFGLAGGFLYIAADARMQPLRGAFSLSPR*
Ga0151489_11705972	3300011106	Soil	VLFHNFWSFPFNGDAWNANFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR*
Ga0137382_113019981	3300012200	Vadose Zone Soil	NFWSFPFNSDGWNQNCWEFLKNFGLAGGFLYIATEAKMQPLREAFSLRPR*
Ga0137368_101063392	3300012358	Vadose Zone Soil	FHNFWSFPFNGDQWNQNFWPFLKNFGLAGGFLYIAADARVRSLRTAFSLKPR*
Ga0137375_101523072	3300012360	Vadose Zone Soil	FHNFWSFPFNGDQWNQNFWPFLKNFGLAGGFLYIAADARVTSLRTAFSLKPR*
Ga0137361_105116741	3300012362	Vadose Zone Soil	HNFWSFPFASDAWTNNFWPFLKNFGLAGGFLYVAADAQMASLRGAFSFQPR*
Ga0157303_103188772	3300012896	Soil	TAVLFHNFWSFPFNSEPWTENFWPFLKNLGLAGGFLYIAADARMQSLREAFSLKAR*
Ga0157306_101346462	3300012912	Soil	WSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR*
Ga0126375_112807252	3300012948	Tropical Forest Soil	YVIATAVLFHNFWDFPFNGDKWNENFWPFLKNLGLAGGFLYIAADAKMQSLRGAFSFSPREAQK*
Ga0126369_102788922	3300012971	Tropical Forest Soil	HNFWSFPFNSDGWNQHFWEFLKNFGLAGGFLYIATEAKMQPLRDAFSMKAQ*
Ga0134110_100049764	3300012975	Grasslands Soil	VFYVVVTAVLFHNFWSFPFGSDSWTQNFWPFLKNLGLAGGFLYVAADARPSSLRDAFSLSSR*
Ga0164306_106157802	3300012988	Soil	VIATAVLFHNFWSFPFNSDGWTQNFWPFLKNFGLAGGFLYIAGCAGMTSLRGAFSLKPR*
Ga0075351_11272872	3300014318	Natural And Restored Wetlands	ALLFVFYCVVTGALFHNFWIYPFASPDWLNNFWPFLKNLGLVAGFLYVAADAKMQPISGAFSFKPRPPD*
Ga0163163_116377682	3300014325	Switchgrass Rhizosphere	FWSFPFNSDVWNENFWPFLKNFGLAGGFLYIASDAKIESLHGAFSLSPREAQR*
Ga0157380_133509741	3300014326	Switchgrass Rhizosphere	FPFNSNEWNDNFWPFLKNVGLAGGFLFVAADAKMQSLGSAFSLRPR*
Ga0134085_100355392	3300015359	Grasslands Soil	FYVVVTAVLFHNFWSFPFASDSWTQNFWPFLKNLGLAGGFLYVAADARPSSLRDAFSLSSR*
Ga0182041_103138173	3300016294	Soil	YVIATAVLFHNFWDFPFNSDTWNDNFWPFLKNLGLAGGFLYVAADAKMESLRGAFSFNPR
Ga0182033_115720942	3300016319	Soil	AVLFHNFWSFTFNGDQWNQNFWPFLKNFGLAGGFLYIVSDAKMQSIRDAFSWKPR
Ga0182032_105796782	3300016357	Soil	IFYVVATAVLFHNFWSFTFNSHEWNENFWPFLKNFGLAGGFLYIAADAKMESLRGAFSLSPREAQ
Ga0187775_100552201	3300017939	Tropical Peatland	YVVATAVLFHNFWSFPFNSHDWNENFWPFLKNLGLAGGFLYIAADAKMQSLRGAFSLSPREAP
Ga0066669_101246952	3300018482	Grasslands Soil	LDFYRRQAALLIVFYVIVTAVLFHNVESFPLNSNEWSQNFWPFLKNFGLAGGFLYVAGCAGMASLRDAFSLKPR
Ga0193755_10628901	3300020004	Soil	FWSFPFNGDAWNQNFWPFLKNFGLAGGFLYVAADAKMQSLRGAFSLNPR
Ga0210399_107146621	3300020581	Soil	CSFPFYSDEWTQNFWPFLKNFGLAGGFLYVAGCAEMTSLREAFSLKPR
Ga0210401_111976501	3300020583	Soil	FHNFWSFSFNGDEWNQNFWEFLKNFGLAGGFVYIAADAKMQSLRDALSVNPR
Ga0213881_103692962	3300021374	Exposed Rock	SFPFNGDAWNENFWPFLKNLGLAGGFLYIAGDARMQSLHGAFSFSPREAQK
Ga0210383_108484121	3300021407	Soil	NFWSFSFNGDVWNLHFWEFRKNFGLAGGFLYIAAEAKMQSLHDAFSLNPR
Ga0213878_100854101	3300021444	Bulk Soil	PFNGDAWNENFWPFLKNFGLAGGFLYIAADARMQSLRGAFSFSPREAQK
Ga0222622_105971861	3300022756	Groundwater Sediment	FHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRGAFSLNPH
Ga0207642_108977482	3300025899	Miscanthus Rhizosphere	TAVLFHNFWSFPFNSDGWTQNFWPFLKNFGLAGGFLYVAGCAEMTSLRGAFSLKPR
Ga0207693_111857072	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VVVTAILFHNFWSFPFNGDEWTQNFWPFLKNFGLAGGFLYVAGDAEMRSLRGAFSLKPR
Ga0207664_115554441	3300025929	Agricultural Soil	VIATAVLFHNFWSFPFNSDGWTQNFWPFLKNFGLAGGFLYIAGCAGMTSLRGAFSLKPR
Ga0207667_118360081	3300025949	Corn Rhizosphere	ATAVLFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR
Ga0207675_1021023062	3300026118	Switchgrass Rhizosphere	IATAVLFHNFWSFPFNSKAWNDNFWPFLKNLGLAGGFLFVAADAKMQSLGSAFSLRLR
Ga0209131_10113891	3300026320	Grasslands Soil	ATAVLFHNFWSFPFASDAWTNNFWPFLKNFGLAGGFLYVAADAQMASLRGAFSFQPR
Ga0209266_10543912	3300026327	Soil	LFHNFWSFPFASDSWTQNFWPFLKNLGLAGGFLYVAADARPSSLRDAFSLSSR
Ga0209156_103651312	3300026547	Soil	FHNFWSFPFNSNEWSQNFWPFLKNFGLAGGFLYVAGCAGMTSLRDAFSLKPR
Ga0208890_10502012	3300027523	Soil	LFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR
Ga0209526_108452642	3300028047	Forest Soil	IFYVIVTAVLFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAGDARVGSLRGAFSSNPR
Ga0307322_100520792	3300028710	Soil	IATAALFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRGAFSLNPH
Ga0307298_100209042	3300028717	Soil	IATAVLFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRDAFSLNPR
Ga0307297_100967751	3300028754	Soil	IATAVLFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLRGAFSLNPH
Ga0307314_101572502	3300028872	Soil	WSFPFNSNEWNENFWPFLKNFGLAGGFLFVAADAKMQSLGSAFSLNLR
Ga0307286_103682372	3300028876	Soil	AMLFHNFWSFPFNGDAWNANFWPFLKNFGLAGGFLYVAADAKMQSLRDAFSLNPR
Ga0307278_101195611	3300028878	Soil	NFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYVAADAKMQSLRSAFSLNPR
Ga0307495_100751712	3300031199	Soil	FPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSLHDAFSLNPR
Ga0318534_103155602	3300031544	Soil	HNFWRSPFNSNEWTQNFWPFLKNFGLAGGFLYVAGCAGMTSLRDAFSFKPR
Ga0310686_1044584242	3300031708	Soil	VITTAVLFHNFWSFSFNSDEWNENFWPFLKNFRLVGGFLYIATDAKMQSLRDAFSFSPR
Ga0306917_101397702	3300031719	Soil	SFPFNSDGWSQNFWPFLKNFGLAGGFLYIATEAKMQPLDDAFSLKAQ
Ga0306917_103579101	3300031719	Soil	PFNGDAWNENFWPFLKNLGLAGGFLYIAADARIQSLRGAFSFSPREAQK
Ga0306917_112172492	3300031719	Soil	AVLFHNFWSFPFNGDAWNENFWPFLKNLGLAGGFLYIAADAKMESLRSAFSLRPRQDQK
Ga0306917_115971381	3300031719	Soil	NFWSFPFNGDAWNENFWPFLKNFGLAGGFLYIAADAKMQSLRGAFSFSPREAQK
Ga0318493_100123241	3300031723	Soil	AVLFHNFWRSPFNSNEWTQNFWPFLKNFGLAGGFLYVAGCAGMTSLRDAFSFKPR
Ga0307468_1013744671	3300031740	Hardwood Forest Soil	LLFIFYVIVTEVLFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADAKMQSMRGAFSLNPR
Ga0306918_104780331	3300031744	Soil	HNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADARTHSLRDAFSLRPR
Ga0318509_100008341	3300031768	Soil	FVFYVIATAVLFHNFWRPPFNSNEWTQNFWPFLKNFGLAGGFLYVAGCAGMTSLRDAFSFKPR
Ga0310917_101957582	3300031833	Soil	FPFNGDAWNENFWPFLKNFGLAGGFLYIAADAKMQSLRSAFSFSPREAQK
Ga0318517_100690153	3300031835	Soil	SFPFNGDAWNENFWPFLKNFGLAGGFLYIAADAKMQSLRGAFSFSPREAQK
Ga0318527_103309531	3300031859	Soil	VLFHNFWSFPFNGDAWNENFWPFLKNFGLAGGFLYIAADAKMQSLRGAFSFSPREAQK
Ga0318520_107117571	3300031897	Soil	ALLFIFYLIATAVSFHNFWSFPFNGDQWNQNFWPFLKNFGLAGGFLYIASEAKMQSIRDAFSWKPR
Ga0306921_116874371	3300031912	Soil	VVATAVLFHNFWSFPFNSDAWNENFWPFLKNFGLAGGFLYIAADARMQSLRGAFSFSPREAQK
Ga0310912_102349191	3300031941	Soil	NFWSFPFNGDAWNENFWPFLKNFGLAGGFLYIAADAKMQSLRSAFSFSPREAQK
Ga0310916_112794572	3300031942	Soil	WSFPFNSDAWNENFWPFLKNFGLAGGFLYIAADARMQSLRGAFSFSPREAQK
Ga0310913_111345841	3300031945	Soil	LFHNFWSFPFNGDAWNENFWPFLKNLGLAGGFLYIAADARIQSLRGAFSFSPREAQK
Ga0310910_114338791	3300031946	Soil	AVLFHNFWSFPFNSDGWDQHFWEFLKNFGLAGGFLYIATEAKMQSLRDAFSMKAQ
Ga0306926_117033862	3300031954	Soil	NFWSFPFNGDEWNENFWPFLKNFGLAGGFLYIAADPKTQSLRGAFSFSPCEAKK
Ga0306926_123109262	3300031954	Soil	TAVLFHNFWDFPFNGEMWNENFWPFLKNLGLAGGFLYIAADAKMRSLRGAFSLSPR
Ga0318531_105745351	3300031981	Soil	WSFPFNSDGWDQHFWEFLKNFGLAGGFLYIATEAKMQSLRDAFSMKAQ
Ga0318507_102461312	3300032025	Soil	FWRSPFNSNEWTQNFWPFLKNFGLAGGFLYVAGCAGMTSLRDAFSFKPR
Ga0318559_101847401	3300032039	Soil	ATAVLFHNFWRPPFNSNEWTQNFWPFLKNFGLAGGFLYVAGCAGMTSLRDAFSFKPR
Ga0318545_102627792	3300032042	Soil	VPQLLGFPFNSDGWSQNFWPFLKNFGLAGGFLYIATEAKMQPLDDAFSLKAQ
Ga0318505_102184821	3300032060	Soil	FHNFWRSPFNSNEWTQNFWPFLKNFGLAGGFLYVAGCAGMTSLRDAFSFKPR
Ga0306924_118505221	3300032076	Soil	HNFWSFPFNGDAWNENFWPFLKNFGLAGGFLYIAADARMQSLRGAFSFSPREAQK
Ga0318518_105244292	3300032090	Soil	VLFHNFWSFPFNGDAWNQNFWPFLKNFGLAGGFLYIAADARTHSLRDAFSLRPR
Ga0306920_1000865861	3300032261	Soil	PFNGDAWNENFWPFLKNFGLAGGFLYIAADAKMQSLRSAFSFSPREAQK
Ga0310914_116520081	3300033289	Soil	FNGDAWNENFWPFLKNFGLAGGFLYIAADARMQSLRGAFSFSPREAQK
Ga0310914_117901551	3300033289	Soil	ATAILFHNFWSFPFNGDEWNENFWPFLKNFGLAGGFLYIAADTKMQSLRGAFSFSPREAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences