NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F070521

Metagenome / Metatranscriptome Family F070521

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070521
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 76 residues
Representative Sequence MSWFPDVIGAAYIIARPVAVVRPIAHLHSDGTRITPVIRSAIIRTATIATIIGSVTRGGAVIASTSY
Number of Associated Samples 104
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 14.75 %
% of genes near scaffold ends (potentially truncated) 26.83 %
% of genes from short scaffolds (< 2000 bps) 90.24 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.122 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(19.512 % of family members)
Environment Ontology (ENVO) Unclassified
(26.829 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.528 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 57.89%    β-sheet: 0.00%    Coil/Unstructured: 42.11%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF00208ELFV_dehydrog 44.72
PF02812ELFV_dehydrog_N 8.94
PF00535Glycos_transf_2 4.88
PF00850Hist_deacetyl 4.07
PF13517FG-GAP_3 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG0334Glutamate dehydrogenase/leucine dehydrogenaseAmino acid transport and metabolism [E] 53.66
COG2902NAD-specific glutamate dehydrogenaseAmino acid transport and metabolism [E] 44.72
COG0123Acetoin utilization deacetylase AcuC or a related deacetylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 8.13

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.12 %
UnclassifiedrootN/A4.88 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459002|F0B48LX02IHOKZAll Organisms → cellular organisms → Bacteria536Open in IMG/M
2170459005|F1BAP7Q01AW5X7All Organisms → cellular organisms → Bacteria541Open in IMG/M
2170459005|F1BAP7Q01DCFEYAll Organisms → cellular organisms → Bacteria533Open in IMG/M
2189573002|GZIGXIF01AU9AGAll Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005526|Ga0073909_10537874All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300005553|Ga0066695_10342814All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300005553|Ga0066695_10538821All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300005556|Ga0066707_10079013All Organisms → cellular organisms → Bacteria1981Open in IMG/M
3300005563|Ga0068855_102231858All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005574|Ga0066694_10473231All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300005587|Ga0066654_10627483All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300006172|Ga0075018_10339159All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300007255|Ga0099791_10537698All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300009098|Ga0105245_11607210All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300009137|Ga0066709_100274664All Organisms → cellular organisms → Bacteria2273Open in IMG/M
3300009137|Ga0066709_100675868All Organisms → cellular organisms → Bacteria1481Open in IMG/M
3300009148|Ga0105243_12928063All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300009156|Ga0111538_11857813All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300009176|Ga0105242_10484762All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300009553|Ga0105249_10402794All Organisms → cellular organisms → Bacteria1399Open in IMG/M
3300010038|Ga0126315_10474903All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300010154|Ga0127503_10093833All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300010154|Ga0127503_10340133All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300010159|Ga0099796_10021695All Organisms → cellular organisms → Bacteria1981Open in IMG/M
3300010301|Ga0134070_10047718All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300010320|Ga0134109_10244367Not Available675Open in IMG/M
3300010322|Ga0134084_10016173Not Available1951Open in IMG/M
3300010323|Ga0134086_10240831All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300010325|Ga0134064_10331904All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300010326|Ga0134065_10016202All Organisms → cellular organisms → Bacteria2050Open in IMG/M
3300010333|Ga0134080_10413543All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300010337|Ga0134062_10148805All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300010364|Ga0134066_10005017Not Available2422Open in IMG/M
3300010371|Ga0134125_12716819All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300010375|Ga0105239_10307030All Organisms → cellular organisms → Bacteria1787Open in IMG/M
3300010397|Ga0134124_10598421All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300010399|Ga0134127_11538808All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300010400|Ga0134122_10265157All Organisms → cellular organisms → Bacteria1457Open in IMG/M
3300010999|Ga0138505_100065147All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300012200|Ga0137382_10508531All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300012202|Ga0137363_10251047All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300012202|Ga0137363_11559044All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300012203|Ga0137399_10822576All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300012206|Ga0137380_10355672All Organisms → cellular organisms → Bacteria1306Open in IMG/M
3300012212|Ga0150985_103836033All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300012212|Ga0150985_111481377All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300012285|Ga0137370_10053793All Organisms → cellular organisms → Bacteria2167Open in IMG/M
3300012351|Ga0137386_10650764All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300012356|Ga0137371_10382297All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300012469|Ga0150984_107528739All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300012511|Ga0157332_1039198All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300012517|Ga0157354_1006796Not Available1045Open in IMG/M
3300012685|Ga0137397_10448427All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter961Open in IMG/M
3300012924|Ga0137413_10658479All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300012930|Ga0137407_11152279All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300012951|Ga0164300_10153019All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1082Open in IMG/M
3300012955|Ga0164298_10140443All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1342Open in IMG/M
3300012955|Ga0164298_10621492All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300012958|Ga0164299_11499436All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia526Open in IMG/M
3300012960|Ga0164301_10517894All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300012960|Ga0164301_10829993All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300012961|Ga0164302_10017276All Organisms → cellular organisms → Bacteria3030Open in IMG/M
3300012961|Ga0164302_11112400All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300012984|Ga0164309_10955506All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300012985|Ga0164308_10344959All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1199Open in IMG/M
3300012988|Ga0164306_10728383All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300012988|Ga0164306_10954284All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300012989|Ga0164305_10592351All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300012989|Ga0164305_11196292All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300012989|Ga0164305_12024492All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300013296|Ga0157374_10023158All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus5550Open in IMG/M
3300013297|Ga0157378_10727947All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300013306|Ga0163162_10774201All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1078Open in IMG/M
3300014157|Ga0134078_10281743All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300014166|Ga0134079_10010685All Organisms → cellular organisms → Bacteria2786Open in IMG/M
3300014325|Ga0163163_10655744All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300014497|Ga0182008_10259823All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300014745|Ga0157377_10370290All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300014969|Ga0157376_12144150All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300015077|Ga0173483_10586300All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300015245|Ga0137409_10494856All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300015359|Ga0134085_10326995All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium678Open in IMG/M
3300015371|Ga0132258_10123521All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus6156Open in IMG/M
3300015371|Ga0132258_11886187All Organisms → cellular organisms → Bacteria1505Open in IMG/M
3300015371|Ga0132258_12229722All Organisms → cellular organisms → Bacteria1375Open in IMG/M
3300015372|Ga0132256_102327374All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300015373|Ga0132257_100073964All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus3863Open in IMG/M
3300015373|Ga0132257_102254794All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300015373|Ga0132257_102823895All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300015374|Ga0132255_100818265All Organisms → cellular organisms → Bacteria1389Open in IMG/M
3300015374|Ga0132255_100821220All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1386Open in IMG/M
3300015374|Ga0132255_103357538Not Available682Open in IMG/M
3300015374|Ga0132255_103449758All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300018054|Ga0184621_10072926All Organisms → cellular organisms → Bacteria1183Open in IMG/M
3300018075|Ga0184632_10155942All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1007Open in IMG/M
3300019361|Ga0173482_10259480All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300019878|Ga0193715_1052518All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus873Open in IMG/M
3300020062|Ga0193724_1094166All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300021073|Ga0210378_10287591All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300021344|Ga0193719_10141502All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1041Open in IMG/M
3300021475|Ga0210392_11397103All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300025906|Ga0207699_10416286All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300025915|Ga0207693_10184468All Organisms → cellular organisms → Bacteria1642Open in IMG/M
3300026329|Ga0209375_1238482All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300026377|Ga0257171_1016334All Organisms → cellular organisms → Bacteria1239Open in IMG/M
3300026538|Ga0209056_10133801All Organisms → cellular organisms → Bacteria1937Open in IMG/M
3300026547|Ga0209156_10455276All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300027903|Ga0209488_10089946All Organisms → cellular organisms → Bacteria2293Open in IMG/M
3300028587|Ga0247828_10497282All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300028755|Ga0307316_10378579All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300030847|Ga0075405_12030356All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300031058|Ga0308189_10339660All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300031184|Ga0307499_10321683All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300031231|Ga0170824_124375794All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300031446|Ga0170820_10756449All Organisms → cellular organisms → Bacteria2220Open in IMG/M
3300031474|Ga0170818_114684463All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300031538|Ga0310888_10528356All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300031908|Ga0310900_11960952All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300031943|Ga0310885_10638119All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300032179|Ga0310889_10396075All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300032205|Ga0307472_102243139All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300034115|Ga0364945_0191268All Organisms → cellular organisms → Bacteria623Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil19.51%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil10.57%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere8.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.06%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.25%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.44%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.44%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.63%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.63%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.63%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.81%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.81%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.81%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.81%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.81%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.81%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459002Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cmEnvironmentalOpen in IMG/M
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2189573002Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012517Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300030847Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E1_006727202170459002Grass SoilMSWLPNVIGAAYIIARPVAIVRPIAHFYSDGTRITPVIRSVIIRTATIATTIIWSVARVGAGAVIASTSY
E41_033099102170459005Grass SoilMSWSPDVIGAAYIIARPVAVVRPIAHCHSDGTRITPVIRSAVVRTATITTIIRSVARVGAVIASTSY
E41_026391702170459005Grass SoilMAVDPDSLAVPRCPMSWFPNVIGAAHIIARPVAVVRPIANLHSDGTRITPVIRTVIIRTAAIATTIIWSVARVGAVIASTSY
FE1_011654702189573002Grass SoilMAVDPDSLAVPRCPMSWFPNVIGAALVITRPANVVRPIAHLYSDGTRITAAVIGSVIIRTATIGATVPTIIGSVARVGAVIASTSYQAEGRGN
Ga0073909_1053787423300005526Surface SoilLISSSHDVMAVDPDSLPVPRCPMTWFPHVIGAAYIIARPVAIVRPIAHLHSDGTRITPVIRSVIIRTAAIATTIIGSVARVGAGAVIAPTSC*
Ga0066695_1034281423300005553SoilMAVDPDSLPVPRCPMSWFPDVIGPAYIIAGPVAVVRPIAHLHSDGTRITPVIRPAIRTATIIGSVARGGAVITSTSY*
Ga0066695_1053882113300005553SoilYIVARTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVARVGAVIASTSY*
Ga0066707_1007901323300005556SoilMSWSPDVIAAAYIIARPVPVVRPIAHLHSDGTRITPVIRPAIRTATIIGSVARGGAVITSTSY*
Ga0068855_10223185823300005563Corn RhizosphereGTRLISSSHDVMAVDPDSLPVPRCPMSRFPDVIGAAYIIARPVAVVRPIAHLHSDGTRITAVIRSVIIRTATVATTIIGSVARVGAGAVIASTSY*
Ga0066694_1047323113300005574SoilSSHDIMAVDPDSLPVPRRPMSWFPDVIGAAYIIARPVPVVRPIAHLHSDGTRITPVIRPAIRTATIIGSVARGGAVITSTSY*
Ga0066654_1062748323300005587SoilVAVDPDSLTVTHNPMSWLPDVIGAAYIVATTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVARVGAVVASTSY*
Ga0075018_1033915913300006172WatershedsTALISSSHDVMAVDPDSLPVPRCPMPWFPNVIGAAYIIAGPVAVVRSIAHLHSDGTRITPVIRSVIIRTAGIATTIIWSVARGGGVIASTSY*
Ga0099791_1053769823300007255Vadose Zone SoilMSWFPDVISAAYIIARPVAVVRPIAHLHSDGTRITPVIRSVIIRTASIIGSVARRGGVIASTSY*
Ga0105245_1160721023300009098Miscanthus RhizosphereMAVDPDSLPVPRCPMSRFPDVIGAAYIIARPMAVVRPIAHLHGDGTRVTPVIRSVIIRTATVATIIGSVARVGAGAVIASTSY*
Ga0066709_10027466423300009137Grasslands SoilMSWSPDVIGAAYIIARPVPVVRPIAHLHSDGTRITPVIRPAIRTATIIGSVARGGAVITSTSY*
Ga0066709_10067586823300009137Grasslands SoilHDVVAVDPDSLTVTHNPMSWLPDVIGAAYIVASTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVSRVGAVVASTSY*
Ga0105243_1292806313300009148Miscanthus RhizosphereMAVDPDSLAVPRCPMSWFPDVIGAAYIVTRTAHVVRPIAHLHSDGTRITPVIRSVIVRTAGIATTIIWSVARIGAVIASTSY*
Ga0111538_1185781323300009156Populus RhizosphereMAVDPDSLAVPRCPMSWFPDVIGAAYIVTRTAHVVRPIAHLHSDGTRITPVIRSVIVRTAAGIATTIIWSVARIGAVIASTSY*
Ga0105242_1048476223300009176Miscanthus RhizosphereMAVDPDSLPVPRCPMSRFPDVIGAAYIIARPVAVVRPIAHLHSDGPRVTAVIRSVIIRTATVATTIIGSVARVGAGAVIASTSY*
Ga0105249_1040279423300009553Switchgrass RhizosphereMAVDPDSLPVPRCPMSRFPDVIGAAYIIARPMAVVRPIAHLHSDGTRVTPVIRSVIIRTATVATTIIGSVARVGAGAVIASTSY*
Ga0126315_1047490323300010038Serpentine SoilMSWFPDVIGAAYIIARPVAVVRPIAHLYSDGTRIASIIRSPIIRTASIGSIARVGAVIASTSY*
Ga0127503_1009383323300010154SoilMPLFPNVIGAAYIIARPVAVVRPIANLHSDGTRITPVIRSVIIRTATIATIIGSVARGGAVIASTSY*
Ga0127503_1034013323300010154SoilMSWFPNVISAAYIIARPVAVVRPIAHLHSDGTRITPVIRSVIIWTATIATIIGSVAWGGGVIASTSH*
Ga0099796_1002169533300010159Vadose Zone SoilMSWFPDVISAAYIIASAVEVVRPIAHLHSDGSRITPVIRSVARRGGVIASTSY*
Ga0134070_1004771823300010301Grasslands SoilMSWFPDVIGPAYIIAGPVAVVRPIAHLHSDGTRITPVIRSVIIRTACIGTTIIWSVARVGAVIASTSY*
Ga0134082_1019279113300010303Grasslands SoilVAVDPDSLTVTHNPMSWLPDVIGAAYIVATTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVARV
Ga0134109_1024436713300010320Grasslands SoilVTHNPMSWLPDVIGAAYIVARTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVARVGAVVASTSY*
Ga0134084_1001617333300010322Grasslands SoilVAVDPDSLTVTHNPMSWLPDVIGAAYIVASTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVARVGAVVASTSY*
Ga0134086_1024083123300010323Grasslands SoilMSWFPDVIGPAYIIAGPVAVIRPIADLHSDGTRITPVIRSVIIRTACIGTTIIWSVARVGAVIASTSY*
Ga0134064_1033190413300010325Grasslands SoilVVAVDPDSLTVTHNPMSWLPDVIGAAYIVARTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIRWSIARVGAVVASTSY*
Ga0134065_1001620223300010326Grasslands SoilVAVDPDSLTVTHNPMSWLPDVIGAAYIVATTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIATTVIWSVARVSAVVASTSY*
Ga0134080_1041354313300010333Grasslands SoilMSWFPDVIGPAYIIAGPVAVVRPIAHLHSDGTRITPVIRSVIIRTATVATIIRSVARVGAVIASTSY*
Ga0134062_1014880523300010337Grasslands SoilMSWSPDVIGAAYIIARPVPVVRPIAHLHSDGTRITPVIRSVIIRTACIGTTIIWSVARVGAVIASTSY*
Ga0134066_1000501723300010364Grasslands SoilVAVDPDSLTVTHNPMSWLPDVIGAAYIVARTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVSRVGAVVASTSY*
Ga0134125_1271681913300010371Terrestrial SoilMSWFPDVIGAAYIVARAVAVVRPIAHLHSDGPRVTAVIRSVIIRTATVATTIIGSVARVGAGAVIASTS
Ga0105239_1030703023300010375Corn RhizosphereMAVDPDSLPVPRCPMSRFPDVIGAAYIIARPVAVVRPIAHLHSDGTRVTAVIRSVIIRTATVATTIIGSVARVGAGAVIASTSY*
Ga0134124_1059842123300010397Terrestrial SoilMAVDPDSLAVPRCPMSWFPDVIGAAYIVTRTAHVVRPIAHLHSDGTRITPVIRSVIVRTAGIATTIIWSVARVGAVIASTSY*
Ga0134127_1153880823300010399Terrestrial SoilMSWFPDVIGAAYIVTRTAHVVRPIAHLHSDGTRITPVIRSVIVRTAGIATTIIWSVARIGAVIASTSY*
Ga0134122_1026515723300010400Terrestrial SoilMPWFPDVIGAAYIVTRTAHVVRPIAHLHSDGTRITPVIRSVIVRTAAGIATTIIWSVARIGAVIASTSY*
Ga0138505_10006514713300010999SoilDVIRASYIIARPVAVVRPIAHLHSDGTRITSVIWSVKIRTATIATIGSVARGGGVIASTSY*
Ga0137382_1050853123300012200Vadose Zone SoilVAVDPDSLTVTHNPMSWLPDVIGAAYIVARAVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVSRVGAVVASTSY*
Ga0137363_1025104723300012202Vadose Zone SoilMSWFPDVIGAAYIIASAVAVVRPIAHLHSDGARITPVIRSVIVRTAGIASTIIWSVARVSAVIASTSYQAERRGNQSE*
Ga0137363_1155904423300012202Vadose Zone SoilMSWFPDVIGAAHIIARPVAVVRPIANLHSDGTRITPVIRSIIIRTAAIATTIIWSVARVGAVIASTSY*
Ga0137399_1082257623300012203Vadose Zone SoilMSWFPDVISAAYIIASAVAVVRPIAHLHSDGTPVIRSVIIRTATIIGSVARRGGVIASTSY*
Ga0137380_1035567223300012206Vadose Zone SoilMSWSPDVIGATYIIARPVAVVRPIAHLHSDGTRITPVIRPAIRTATIIGSVARRGAVITSTSY*
Ga0150985_10383603313300012212Avena Fatua RhizosphereVAVDPDSLTVTHNPMSWLPDVIGAAYIVATTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVSRVGAVVASTSY*
Ga0150985_11148137713300012212Avena Fatua RhizosphereMSWFPDVIGAAYIIARPVAVVRPIAHLHRDGTRITTVIRSVIIRPAAIVWPVARVGAGAVIASTSY*
Ga0137370_1005379323300012285Vadose Zone SoilVAVDPDSLTVTHNPMSWLPDVIGAAYIVASTVHIVRPIAYLHSDGAWITPVSRPPIIRTTPIVTTIIWSVSRVGAVVASTSY*
Ga0137386_1065076413300012351Vadose Zone SoilPDSLTVTHNPMSWLPDVIGAAYIVASTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVARVGAVVASTSY*
Ga0137371_1038229713300012356Vadose Zone SoilMSWFPDVIGPAYIIAGTVAVIRQIAHLHSDGTRITPVIRSVIIRTACIGTTIIWSVARVGAVIASTSY*
Ga0150984_10752873913300012469Avena Fatua RhizosphereMSWFPDVIGAAYIIARPVAVVRPIAHLHSDGTRITPVIRSVIIRPAAIATTIIGPVARVGAGAIIASTSY*
Ga0157332_103919823300012511SoilMAVDPDSLPVTRCPMSWFPDVIGAAHIIASPVAVVRPIAHLYSDGTRVTPVIRSVIIRTAAIATTIIGSVARVGAGAVIASTSY*
Ga0157354_100679623300012517Unplanted SoilPDVIAAAYIIARPMSVVRAIADGHSDGTRITSVIRSVIIRTAGIATTVIWSVARVGAGAVIASTSD*
Ga0137397_1044842723300012685Vadose Zone SoilMSWFPDVIGAAYIIARPVAVVRPIANLNCDGTRITPVIRSVIIRTATIATIIGSVARGGAVIASTSY*
Ga0137413_1065847913300012924Vadose Zone SoilMSWFPDVISAAYIIASAVAVVRPIAHLHSDGTRITPVIRSVIIRTATIIGSVARRGGVIASTSY*
Ga0137407_1115227923300012930Vadose Zone SoilMSWFPDVIGAAYIIARPVAVVRPIAHLHSDGTRITPVIRSAIIRTATIATIIGSVARIPSVIVGASSHAERGGD*
Ga0164300_1015301923300012951SoilMSVDPNSLPIARCPVSWFPDVIGAAYIIARPVAVIRPIAHLYSDGTRVTRVIRSVIIRTATVATIIGSVARVGAGAVIASTAY*
Ga0164298_1014044323300012955SoilMSVDPNSLPIARCPVSWFPDVIGAANIIARPVAVVRPIAHLYSDGTRVTRVIRSVIIRTATVATIIGSVARVGAGAVIASTSY*
Ga0164298_1062149223300012955SoilMSWFPNVISAAYIIARPVAVVRPIAHLHSDGTRITPVIRSVIVRTASIATTIIWSVARGGGVIASTSY*
Ga0164299_1149943613300012958SoilIIARPVAVVRPIAHLYSDGTRVTRVIRSVIIRTATVATIIGSVARVGAGAVIASTSY*
Ga0164301_1051789423300012960SoilMSVDPNSLSIARCPVTWFPDVIGAANIIARPVAVVRPIAHLYSDGTRVTRVIRSVIIRTATVATIIGSVARVGAGAVIASTAY*
Ga0164301_1082999323300012960SoilMSVDPNSLPIARCPVSWFPDVIGAAYIIARPVAVIRPIAHLYSDGTRVTRVIRSVVIRTATVATIIGAVARVGAGAVIASTAY*
Ga0164302_1001727633300012961SoilMSWFPDVIGAAYIIARPVAVVRPIAHLHSDGTRITPVIRSVIIWTATIATIIGSVAWGGGVIASTSH*
Ga0164302_1111240023300012961SoilMSWFPDVIGAAYIIASAVAVVRPIAHLYSDGTRITPVIRSVILRTAGIATIIIRSVARVSAVIASTSYQAERRGNQSE*
Ga0164309_1095550623300012984SoilIGAAYIIASAVAVVRPIAHLHSDGTRITPVIRSVIVRTAGIATTIIWSVARVSAVIASTSYQAERRGNQSE*
Ga0164308_1034495923300012985SoilMSVDPNSLPIARCPVSWFPDVIGAANIIARPVAVVRPIAHLYSDGTRVTRVIRSVIIRTATVATIIGSVARVGAGAVIASTAY*
Ga0164306_1072838313300012988SoilMSWFPDVISAAYIIASAVAVVRPIAHLHSDGTRITPVIRSVIIRTAAVATAIIWSVARIGAGAVIASTSY*
Ga0164306_1095428413300012988SoilMSVDPNSLSIARCPVTWFPDVIGAANIIARPVAVVRPIAHLYSDGTRVTRVIRSVIIRTATVATIIGSVARVGAGAVIASTSY*
Ga0164305_1059235113300012989SoilGAAYIITRPVAIVRPIAHLYSDGTRITPVIRSVIIRTAAIATTIIGSIARIGAGAVIASTSY*
Ga0164305_1119629213300012989SoilPVSWFPDVIGAAHIIARPVAVVRPIAHLYSDGTRVTRVIRSVIIRTATVATIIGSVARVGAGAVIASTAY*
Ga0164305_1202449223300012989SoilMAVDPDSLAVAHNPVSWLPDVIGAAYIIARPVAVVRPVAHFHSDGAWITPVRRSPIIRTAAIATTIVWSVARVGAVVASTSY*
Ga0157374_1002315863300013296Miscanthus RhizosphereMSWFPDVIGAAYIIASAVAVVRPIAHLHSDGTRITPVIRSVIVRTAGIATTIIWSVARIGAVIASTSY*
Ga0157378_1072794713300013297Miscanthus RhizosphereMSWFPDVIAAAYIIACSVAVVRPIAHLHSDRTRITPVVRSVIIRTSTVATIIGSVARVGAGAVIASTSY*
Ga0163162_1077420123300013306Switchgrass RhizosphereMSRFPDVIGAAYIIARPVAVVRPIAHLHSDGTRITPVIRSVIIRTATVATIIGSVARVGAGAVIASTSY*
Ga0134078_1028174313300014157Grasslands SoilAYIVASTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIATTVIWSVARVSAVVASTSY*
Ga0134079_1001068533300014166Grasslands SoilVAVDPDSLAVTHNPMSWLPNVIGAAYIVARTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIATTVIWSVARVSAVVASTSY*
Ga0163163_1065574413300014325Switchgrass RhizosphereGASYIITRPVAVVRPIAHLHSDGTRITPVVRSVIVRTAGIATTIIWSVARGGGVIASTSY
Ga0182008_1025982323300014497RhizosphereVAVDPDSLTVTHNPMSWFPDVIGAAYIVATTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIATTIIWSVARVGAVVTSTSY*
Ga0157377_1037029023300014745Miscanthus RhizosphereMAVDPDSLAVPRCPMSWFPDVIGAAYIVTRTAHVVRPIAHLHSDRTRITPVIRSVIVRTAGIATTIIWSVARIGAVIASTSY*
Ga0157376_1214415023300014969Miscanthus RhizosphereMAVDPDSLPVPRCPVSWFPDVIGAAHIIARPVAVVRPIAHLYSDGTRITPVIRSVIIRTATVATTIIGSVARVGAGAVIASTSY*
Ga0173483_1058630013300015077SoilVAVDPKPLTVTHNPMSWLPDVIGAAYIVATTVHIVRPIAYLHSDGAWITPISRPPIIWAAPIATTIIWPVARVGAVVASTSY*
Ga0137409_1049485623300015245Vadose Zone SoilMSWFPDVISAAYIIASAVEVVRPIAHLHSNGTRITPVIRSVIIRTATIIGSVARVGGIIALAATHTKRHTE*
Ga0134085_1032699523300015359Grasslands SoilMSWFPDVIGPAYIIAGPVAVVRPIAHLHSDGTRITPVIRSVIIRTACIGTTIIWSVARIGAVVASTSY*
Ga0132258_1012352183300015371Arabidopsis RhizosphereMAWFPDVIGAAYVIARPVTVVRPIAHLHSDGTRVTPVIRSVIIRTAGIATTVIWSVARVGAGAVIASTSD*
Ga0132258_1188618723300015371Arabidopsis RhizosphereMTWFPHVIGAAYIIARPVAIVRPIAHLHSDGTRITPVIRSVIIRTAAIATIIGSVARGGGVIASTPH*
Ga0132258_1222972223300015371Arabidopsis RhizosphereMSWFPDVIAAAYIIARPVSVVRAIADGHSDGTRITSVIRSVIIRTATIATIVGSVARVVAVIASTSY*
Ga0132256_10232737423300015372Arabidopsis RhizosphereMAVDPDSLPVPRGPMSWFPDVVSAAYIIARPMAVVRPIAHLYSDGTRITPVIGSVIIRTAAIATTIIRSVARVGAGAVIASTSY*
Ga0132257_10007396453300015373Arabidopsis RhizosphereMAWFPDVIGAAYVIARPVKVVRPIAHLHSDGTRVTPVIRSVIIRTAGIATTVIWSVARVGAGAVIASTSD*
Ga0132257_10225479413300015373Arabidopsis RhizosphereDVIAAAYIIARPMSVVRAIADRHSDGTWITSEIRSVIIRTAAIATMVRSVARVVVVIASTSY*
Ga0132257_10282389513300015373Arabidopsis RhizosphereMSVDPNSLSIARCPVTWFPDVIGAANIIARPVAVVRPIAHLYSDGTRVTRVIRSVIIRTATVATIIGSVA
Ga0132255_10081826523300015374Arabidopsis RhizosphereMSWFPDVIAAAYIIARPMSVVRAIADRHSDGTRITSVIRSVIIRTATIATIVGSVARVVAVIASTSY*
Ga0132255_10082122023300015374Arabidopsis RhizosphereMSWFPDVIGAAYIIARPVAVIRPIAHLYSDGTRITAVIRSVIIRTATVATTIIGSVARVGAGAVIASTSY*
Ga0132255_10335753813300015374Arabidopsis RhizosphereIIARPVAVVRPIAHLYSDGTRVTPVIRPVIIRTAAIATTIIGSVARIGAGAVIASTPY*
Ga0132255_10344975813300015374Arabidopsis RhizosphereMAVDPDSLPVPRCPVSWFPDVIGAAHIIARPVAVVRPIAHLYSDGTRVTRVIRSVIIRTATVATIIGSVARVGAGAVIASTAY*
Ga0184621_1007292613300018054Groundwater SedimentMSWFPNVIGASYIIARPVAVVRPIAHLHSDGTRITPVIRSAIIRTATIATIIGSVTRGGAVIASTSY
Ga0184632_1015594223300018075Groundwater SedimentMAMDPNFLTVPPSPVSRPPDVIGAAYIIARPVAVVRPIAHLHSDGTRITPVIRSAIIRTATIATIIGSVARGGGVIASTSY
Ga0173482_1025948023300019361SoilMAVDPDSLPVPRCPMSWFPDVIGAAYIIARPVAVVGPIADCHSDGTRITSVIRSAIIRTGAMIGTIAGITSVVVCAARDTK
Ga0193715_105251823300019878SoilMSRFPDVIGAAYIIARTSHVVRPIAHLHSDGTRITPVIRSVIVRTAAIATTIIWSVARVGAVIASTSC
Ga0193724_109416613300020062SoilMAVDPDSLPVPRCPMSWFPDVIGAAYIIARPVAVVSPIANLNCDGTRITPVIRSVIIRTATIATIIGSVARGGAVIASTSY
Ga0210378_1028759123300021073Groundwater SedimentDRPRRLESRRSLVARSISSSHDVMAVDPDSLPVARCPMSWFPDVISASYIIARPVAVVRPIAHLHSDGTRRTPVIRSVIIRTATIATIIGSVARGGGVVASTSY
Ga0193719_1014150223300021344SoilMSWFPDVIGAAYIIARPVAVVRPIAHLHSDGTRITPVIRSAIIRTATIATIIGSVTRGGAVIASTSY
Ga0210392_1139710313300021475SoilMAVDPDSLPVTRCPMSWFPDVIGAAYIIARPMAVVRPIAHLHSDGTRVTAVIRSVIIRTATVATTIIRSVARVGAGAVIASTSY
Ga0207699_1041628623300025906Corn, Switchgrass And Miscanthus RhizosphereMAVDPNSLPVPRCPMSWFPDVIGAAYIIASAVAVVRPIAHLHSDGARITPVIRSVIVRTAGIATTIIWSVARVSAVIASTSYQAERRGNQSE
Ga0207693_1018446823300025915Corn, Switchgrass And Miscanthus RhizosphereTQGTALISSSHDVMAVDPDSLPVPRCPMSWFPDVIGAAYIIASAVAVVRPIAHLHSDGTRITPVIRSVIVRTAGIATTIIWSVARVSAVIASTSYQAERRGNQSE
Ga0209375_123848213300026329SoilDPRLISSSHDVVAVDPDSLTVTHNPMSWLPDVIGAAYIVATTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIVTTIIWSVARVGAVVASTSY
Ga0257171_101633423300026377SoilMSWFPDVIGPAYIIAGPVAVVRPIAHLHSDGTRITPVIRSVIIRTACIGTTIIWSVARVGAVIASTSY
Ga0209056_1013380123300026538SoilMSWSPDVIGAAYIIARPVPVVRPIAHLHSDGTRITPVIRPAIRTATIIGSVARGGAVITSTSY
Ga0209156_1045527613300026547SoilSLAVTHNPMSWLPNVIGAAYIVARTVHIVRPIAYLHSDGAWITPVSRPPIIRTAPIATTVIWSVARVSAVVASTSY
Ga0209488_1008994623300027903Vadose Zone SoilMSWFPDVISAAYIIASAVAVVRPIAHLHSDGTPVIRSVIIRTATIIGSVARRGGVIASTS
Ga0247828_1049728223300028587SoilMAVDPDSLPVTRCPMSWFPDVIGAAYIIARAVAVIGPIAHLHSDGTRITPVIRSVIIRTATIAAIIGSVARGRTVIASTSY
Ga0307316_1037857913300028755SoilMAVDPDSLPIPRGPMSWFPDVISAAYIVARPVTVVRPIAYLHSDGTRVTPVIRSVIIRTPSVATIIGSVARVGVGAVIASTSY
Ga0075405_1203035623300030847SoilMSWFPDVIGAAYIIASAVAVVRPIAHLHSDGTRITSVIRSVIIRTATIATIIRSVARGGGVIASTSY
Ga0308189_1033966013300031058SoilMAVDPNSLPVTRCPVSWFPDVIGAAYIIARPVAVVRPIAHLHSDRTRVTPVIRSVIIRTATVTTIIRSVARVGAGAVIASTSY
Ga0307499_1032168313300031184SoilMAVDPDSLPVPRCPMSRFPDVIGAAYIIARPVAVVRPIAHLHSDGTRITAVIRSVIIRTATIATIIGSVARVGAVIASTSY
Ga0170824_12437579423300031231Forest SoilSLVARSISASDDVMAVDPDSLPVTRCPMSWFPDVVVAAYIIARPVAVVRPIAHLHSDGTRITPVIRSVIIRTATIATSIIGSVARIGAGAVIASTSY
Ga0170820_1075644933300031446Forest SoilMSWFPDVIGAAYIIASAVAVVRPIAHLDSDGTRITPVIRSVIVRTAGIATTIIWSVARVSAVIASTSYQAERRGNQSE
Ga0170818_11468446313300031474Forest SoilSSSHDVMAVDPDSLTVARNPVPWFPDVIGAALVITSPVNVVRPIAHLHSDGTRITPSVIGSVIIRTASVATTIATTIIRSIARVGAVIASTSY
Ga0310888_1052835623300031538SoilMAVDPDSLAVPRCPMSWFPDVIGATYIIARPVAVVRPIAHLNSDATPRIAPVIRSVIIGTATIASIIGSVARIGAGAVITSTSY
Ga0310900_1196095213300031908SoilTQGTRLISSSHDVMAVDPDSLAVPRCPMSWFPDVIGAAYIVTRTAHVVRPIAHLHSDGTRITPVIRSVIVRTAGIATTIIWSVARIGAVIASTSY
Ga0310885_1063811923300031943SoilMAVDPDSLPATRCPMSWFPDVIGATYIIARPVAVVRPIAHLHSDGTRITPVIRSVVIGTATIATIIGSVARGGGVVASTSY
Ga0310889_1039607523300032179SoilMAVDPDSLAVPRCPMSWFPDVIGAAYIVTRTAHVVRPIAHLHSDGTRITPVIRSVIVRTAGIATTIIWSVARIGAVIASTSY
Ga0307472_10224313923300032205Hardwood Forest SoilMAVDPDSLAIPRCPMSWFPDVIGAAHIIARPVAVVRPIANLHSDGTRITPVIRSVIIRTAAIATTITTIIWSVARV
Ga0364945_0191268_419_6223300034115SedimentMSWFPDVIGASYIIARPVAVVRPIAHLHSDGTRITSVIRSVIIRTATIATIIGSVARGGGVIASTSY

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.