Metagenome / Metatranscriptome Family F070581

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070581
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	64 residues
Representative Sequence	VVEFGAPEYAIFLSTLPLEFDERVRVSRDGNGRGAEAAVIALQYHEGRKAVAVRFLEGPCDWMQP
Number of Associated Samples	101
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.23 %
% of genes near scaffold ends (potentially truncated)	63.41 %
% of genes from short scaffolds (< 2000 bps)	61.79 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.244 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.325 % of family members)
Environment Ontology (ENVO)	Unclassified (36.585 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.228 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.23% β-sheet: 37.63% Coil/Unstructured: 59.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
b.45.2.1: PilZ domain	d3kyga2	3kyg	0.81211
b.49.1.2: N-terminal domain of A and B subunits of V1 ATP synthase	d3gqba1	3gqb	0.70805
b.45.1.2: NADH:FMN oxidoreductase-like	d1yoaa1	1yoa	0.70503
b.45.1.0: automated matches	d3k86a_	3k86	0.69945
b.45.1.4: MTH863-like	d2ptfa1	2ptf	0.69878

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF02954	HTH_8	14.63
PF00672	HAMP	5.69
PF00072	Response_reg	2.44
PF02518	HATPase_c	2.44
PF01584	CheW	1.63
PF13426	PAS_9	1.63
PF00512	HisKA	1.63
PF01593	Amino_oxidase	0.81
PF00487	FA_desaturase	0.81
PF01339	CheB_methylest	0.81
PF03705	CheR_N	0.81
PF01739	CheR	0.81
PF02895	H-kinase_dim	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	3.25
COG0643	Chemotaxis protein histidine kinase CheA	Signal transduction mechanisms [T]	1.63
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.63
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.81
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.81
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.24 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.24 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.24 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.76 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.76 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	9.76 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.76 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	9.76 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.76 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	9.76 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	9.76 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	9.76 %
Unclassified	root	N/A	9.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	9.76 %
Unclassified	root	N/A	9.76 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105684250	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300000955\|JGI1027J12803_107110988	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300004080\|Ga0062385_10003202	All Organisms → cellular organisms → Bacteria	4767	Open in IMG/M
3300004080\|Ga0062385_10034808	All Organisms → cellular organisms → Bacteria → Acidobacteria	2055	Open in IMG/M
3300004091\|Ga0062387_100012213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3232	Open in IMG/M
3300004091\|Ga0062387_100823066	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300004152\|Ga0062386_100001905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	13978	Open in IMG/M
3300004152\|Ga0062386_100115097	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300005332\|Ga0066388_100609688	All Organisms → cellular organisms → Bacteria → Acidobacteria	1713	Open in IMG/M
3300005439\|Ga0070711_100059822	All Organisms → cellular organisms → Bacteria → Acidobacteria	2646	Open in IMG/M
3300005526\|Ga0073909_10597255	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	544	Open in IMG/M
3300005541\|Ga0070733_10035338	All Organisms → cellular organisms → Bacteria	3117	Open in IMG/M
3300005542\|Ga0070732_10662418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	635	Open in IMG/M
3300005555\|Ga0066692_10350296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	937	Open in IMG/M
3300005602\|Ga0070762_10001452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	10959	Open in IMG/M
3300006086\|Ga0075019_10756845	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	617	Open in IMG/M
3300006162\|Ga0075030_100515774	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300006163\|Ga0070715_11002218	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006175\|Ga0070712_100078895	All Organisms → cellular organisms → Bacteria	2378	Open in IMG/M
3300006175\|Ga0070712_100636495	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300006176\|Ga0070765_100000632	All Organisms → cellular organisms → Bacteria	21189	Open in IMG/M
3300006176\|Ga0070765_100438948	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300009038\|Ga0099829_10386485	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300010043\|Ga0126380_11342458	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300010339\|Ga0074046_10604700	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	649	Open in IMG/M
3300010341\|Ga0074045_10000460	All Organisms → cellular organisms → Bacteria	39559	Open in IMG/M
3300010360\|Ga0126372_10729508	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300010361\|Ga0126378_10317470	All Organisms → cellular organisms → Bacteria → Acidobacteria	1664	Open in IMG/M
3300010361\|Ga0126378_12644494	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010362\|Ga0126377_10536457	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300010379\|Ga0136449_100517240	All Organisms → cellular organisms → Bacteria	2066	Open in IMG/M
3300012202\|Ga0137363_10009957	All Organisms → cellular organisms → Bacteria	6048	Open in IMG/M
3300012202\|Ga0137363_10432696	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300012930\|Ga0137407_11613727	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	618	Open in IMG/M
3300014162\|Ga0181538_10562657	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300016357\|Ga0182032_11012072	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300016357\|Ga0182032_11157368	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	665	Open in IMG/M
3300016387\|Ga0182040_11411778	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300016422\|Ga0182039_11123226	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300017823\|Ga0187818_10002208	All Organisms → cellular organisms → Bacteria	8108	Open in IMG/M
3300017926\|Ga0187807_1276258	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	554	Open in IMG/M
3300017932\|Ga0187814_10063352	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300017933\|Ga0187801_10041673	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300017934\|Ga0187803_10001751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8517	Open in IMG/M
3300017961\|Ga0187778_10607856	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300017974\|Ga0187777_11388065	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	518	Open in IMG/M
3300017975\|Ga0187782_10000110	All Organisms → cellular organisms → Bacteria	47702	Open in IMG/M
3300018012\|Ga0187810_10022411	All Organisms → cellular organisms → Bacteria → Acidobacteria	2282	Open in IMG/M
3300018040\|Ga0187862_10347441	All Organisms → cellular organisms → Bacteria → Acidobacteria	923	Open in IMG/M
3300018086\|Ga0187769_10800039	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300018088\|Ga0187771_11749200	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300018090\|Ga0187770_10281634	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300018090\|Ga0187770_10386064	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300018090\|Ga0187770_10556993	All Organisms → cellular organisms → Bacteria → Acidobacteria	909	Open in IMG/M
3300020579\|Ga0210407_10172332	All Organisms → cellular organisms → Bacteria → Acidobacteria	1675	Open in IMG/M
3300020580\|Ga0210403_10002272	All Organisms → cellular organisms → Bacteria	17535	Open in IMG/M
3300020580\|Ga0210403_10019065	All Organisms → cellular organisms → Bacteria	5480	Open in IMG/M
3300020580\|Ga0210403_10056974	All Organisms → cellular organisms → Bacteria → Acidobacteria	3129	Open in IMG/M
3300020580\|Ga0210403_10997371	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300020581\|Ga0210399_10009704	All Organisms → cellular organisms → Bacteria	7528	Open in IMG/M
3300021168\|Ga0210406_10325858	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300021171\|Ga0210405_10191051	All Organisms → cellular organisms → Bacteria → Acidobacteria	1623	Open in IMG/M
3300021178\|Ga0210408_10369654	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300021403\|Ga0210397_11307453	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	563	Open in IMG/M
3300021406\|Ga0210386_10243063	All Organisms → cellular organisms → Bacteria → Acidobacteria	1534	Open in IMG/M
3300021407\|Ga0210383_10021590	All Organisms → cellular organisms → Bacteria	5418	Open in IMG/M
3300021407\|Ga0210383_10742357	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300021420\|Ga0210394_10297559	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300021477\|Ga0210398_10505975	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300021479\|Ga0210410_10302771	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300021559\|Ga0210409_10336742	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300025898\|Ga0207692_10318387	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300026319\|Ga0209647_1015878	All Organisms → cellular organisms → Bacteria	4835	Open in IMG/M
3300026823\|Ga0207759_119980	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300026824\|Ga0207723_110299	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300027045\|Ga0207726_1041982	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	626	Open in IMG/M
3300027502\|Ga0209622_1054190	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300027565\|Ga0209219_1137879	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	591	Open in IMG/M
3300027635\|Ga0209625_1010599	All Organisms → cellular organisms → Bacteria → Acidobacteria	2005	Open in IMG/M
3300027698\|Ga0209446_1043612	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300027783\|Ga0209448_10008560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3240	Open in IMG/M
3300027795\|Ga0209139_10067162	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300027867\|Ga0209167_10018349	All Organisms → cellular organisms → Bacteria → Acidobacteria	3318	Open in IMG/M
3300027884\|Ga0209275_10001463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9648	Open in IMG/M
3300027905\|Ga0209415_10136932	All Organisms → cellular organisms → Bacteria → Acidobacteria	2517	Open in IMG/M
3300027911\|Ga0209698_10253863	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300028906\|Ga0308309_10145901	All Organisms → cellular organisms → Bacteria → Acidobacteria	1898	Open in IMG/M
3300028906\|Ga0308309_10422057	All Organisms → cellular organisms → Bacteria → Acidobacteria	1146	Open in IMG/M
3300030847\|Ga0075405_11823431	All Organisms → cellular organisms → Bacteria → Acidobacteria	1193	Open in IMG/M
3300030974\|Ga0075371_10690328	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300031057\|Ga0170834_112628341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1543	Open in IMG/M
3300031231\|Ga0170824_106337261	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2587	Open in IMG/M
3300031231\|Ga0170824_123333297	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031744\|Ga0306918_10374821	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300031753\|Ga0307477_10445730	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300031770\|Ga0318521_10624346	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300031794\|Ga0318503_10100586	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300031820\|Ga0307473_10688342	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300031859\|Ga0318527_10528563	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300031941\|Ga0310912_10474217	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031962\|Ga0307479_11833312	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	558	Open in IMG/M
3300032076\|Ga0306924_11840060	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300032180\|Ga0307471_100033669	All Organisms → cellular organisms → Bacteria	3994	Open in IMG/M
3300032261\|Ga0306920_100918531	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300032770\|Ga0335085_10013972	All Organisms → cellular organisms → Bacteria → Acidobacteria	11746	Open in IMG/M
3300032770\|Ga0335085_10265022	All Organisms → cellular organisms → Bacteria	2056	Open in IMG/M
3300032829\|Ga0335070_10759149	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300032955\|Ga0335076_10061226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3719	Open in IMG/M
3300032955\|Ga0335076_10064211	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3624	Open in IMG/M
3300033134\|Ga0335073_10563001	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300033289\|Ga0310914_11482091	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	582	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.74%
Aquatic	Environmental → Aquatic	16.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.74%
Freshwater	Environmental → Aquatic → Freshwater	13.82%
Sediment	Environmental → Aquatic → Sediment	2.44%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.07%
Loam	Environmental → Terrestrial → Soil → Loam	17.07%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.44%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.01%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.13%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.25%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.25%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.44%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.63%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000731	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026824	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)	Environmental	Open in IMG/M
3300026833	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1056842502	3300000364	Soil	VVEFGASEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP*
JGI12381J11899_10024022	3300000731	Tropical Forest Soil	VIAKRPGQSQAQEATVIEYAAEEFAIFLCRLALEFDDRVELAREGGRPEEAAVIALQYQAGSKAVAVRFVNGPCGWMINP*
JGI1027J12803_1071109884	3300000955	Soil	TVVEFGASEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP*
Ga0062385_100032022	3300004080	Bog Forest Soil	VEFGTSEFAIFLSKLALEFDDHVRLVRDGGGRPAEAAVIALQYHEGRKAVAVRFLDRPCEWMMCP*
Ga0062385_100348082	3300004080	Bog Forest Soil	VVEFGAPEYAIFLSTLPLEFDERVRVSRDGNGRGAEAAVIALQYHEGRKAVAVRFLEGPCDWMQP*
Ga0062387_1000122132	3300004091	Bog Forest Soil	MVEFGTTDYAIFVSKLALEFDDRVRLVRDGGGHPAEAAVIALQYHGGRKAVAVRFLDRPCEWMMHP*
Ga0062387_1008230662	3300004091	Bog Forest Soil	TVVEFGAPEYAIFLSTLPLEFDERVRVSRDGNGRGAEAAVIALQYHEGRKAVAVRFLEGPCDWMQP*
Ga0062386_1000019059	3300004152	Bog Forest Soil	VVEYGTKEFAIFLSKLALEFDDRVRLVREGGGRPAEAAVIALQYHEGSKAVAVRFLDAPCEWMMQP*
Ga0062386_1001150971	3300004152	Bog Forest Soil	VVEFGAPEYAIFLSTLPMEFDERVRVTRDGNGRGVEAAVIALQYHEGRKAVAVRF
Ga0066388_1006096881	3300005332	Tropical Forest Soil	VEYGSEEYVIFCSTLPLEFADRVRISRDGGGRPAEATVIALQYHEGRKAVAVRFVDGPCEWMRQS*
Ga0070711_1000598223	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VVEFGAAEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP*
Ga0073909_105972551	3300005526	Surface Soil	EYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP*
Ga0070733_100353382	3300005541	Surface Soil	MLEFGAGEIAIFLSNLPIEFDDRVRLSRGDMKQSVEATVIALQYHQGRKAVAVRFLNGACDWVRQP*
Ga0070732_106624182	3300005542	Surface Soil	GSSPARLQETAVVEYGSEEFAIFLSTLPLEFADRVGISGNGGGHSAEATVIALQYHEGRKAVAVRFVNGRCEWMRQS*
Ga0066692_103502962	3300005555	Soil	FLSVLPLEFADRVRVSGNGEGRSAEATVIALQYHEGRKAVAVRFVEGRCEWMRQS*
Ga0070762_100014521	3300005602	Soil	VEFGSEEFAIFLSTLPLEFDDRVQIVRDGGRPAEAAVIALQYHAGRKAVAVRFL
Ga0075019_107568451	3300006086	Watersheds	EAALVEYGSEEYAIFVSTLPLEFDDRVSISRDGGGRSAEAAVIALQYHEGRKAVAVRFLAGPCEWMRQP*
Ga0075030_1005157742	3300006162	Watersheds	STLPLEFDDRLSMAIERGGSSAEAAVIALQYHEGRKAVAVRFLAGPCEWMRQP*
Ga0070715_110022181	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	IFLSTLPLEFADRVHISGNGGRHSAEATVIALQYHEGRKAVAVRFVDGNCEWMRQS*
Ga0070712_1000788952	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VVEFGGSEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP*
Ga0070712_1006364952	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VQETAVVEYGSEEYAIFLSTLPLEFADRVHISGNGGRHSAEATVIALQYHEGRKAVAVRFVDGRCEWMRQS*
Ga0070765_10000063214	3300006176	Soil	VLEFGAGEIAIFLSNLPIEFDDRVRLSRGDMKQSVEATVIALQYHQGRKAVAVRFLNGACDWVRQP*
Ga0070765_1004389482	3300006176	Soil	MLEFGAGEIAIFLSNLPIEFDDRVRLSRGDAKQTVEAAVIALQYHEGRKAVAVRFLNGACDWMRQP*
Ga0099829_103864852	3300009038	Vadose Zone Soil	PLEFADRVRISGNGGGHSAEATVIALQYHEGRKAVAVRFVEGRCEWMRQS*
Ga0126380_100976601	3300010043	Tropical Forest Soil	AQDLTVIEFASQEFAIFLCRLALEFDDRVELVREEGGRPAEAAVIALQYQAGSKAIAVRFLNGPCEWMNNR*
Ga0126380_113424582	3300010043	Tropical Forest Soil	IFSSTLPLEFADRVRISKDGGGRPAEATVIALQYHEGRKAVAVRFVDGPCEWMRQS*
Ga0126382_110924751	3300010047	Tropical Forest Soil	VIARRSGQARAQDLTVIEFASQEFAIFLCRLALEFDDRVELVREEGGRPAEAAVIALQYQAGSKAIAVRFLNGPCEWMNNR*
Ga0074046_106047002	3300010339	Bog Forest Soil	YGTAECAIFLSSLPLEFADRVRVERDGGGRPAEAAVIALQYQEGRKAVAVRFLEGPCEWMRQP*
Ga0074045_100004604	3300010341	Bog Forest Soil	VQSLRPGQSKLQESTVVEFGASEYAIFLSTLPMEFDERVRVTRDGNGRGAEASVIALQYHEGRKAVAVRFLQGPCDWMQP*
Ga0126372_107295081	3300010360	Tropical Forest Soil	AIFLSTLPLEFGDRIELKARPEGNHAAATVDALQYHEGSKAVAVRFLEGPCDWMVHP*
Ga0126378_103174701	3300010361	Tropical Forest Soil	YAIFLSTLPLEFADRVRLSRDGGGRSAVATVIALQYHEGRKAIAVRFLDGPCEWMRQP*
Ga0126378_126444941	3300010361	Tropical Forest Soil	IGRRSGQARAQDLTVIEFASQEFAIFLCRLALEFDDRVELVREEGGRPAEAAVIALQYQAGSKAIAVRFLNGPCEWMNNR*
Ga0126377_105364571	3300010362	Tropical Forest Soil	HALLQEAAVVEYGSEEYAIFSSTFPLEFADRVRISRDGGGRPAEATVIALQYHEGRKAVAVRFLDGPCEWMRQS*
Ga0136449_1005172402	3300010379	Peatlands Soil	VQSLRPGQSKLQESTVVEFGASEYAIFLSTLPVEFDERVRVIRDGNGGGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP*
Ga0137363_100099578	3300012202	Vadose Zone Soil	EHAIFVSGLPLEFDDRVRIGRDRNGSPAEAAVIAVQYHDGCKAVAVRFLDGPCDWVA*
Ga0137363_104326961	3300012202	Vadose Zone Soil	LEFADRVSISGNGGGHSAEATVIALQYHEGRKAVAVRFVDGNCEWMRQS*
Ga0137407_116137271	3300012930	Vadose Zone Soil	NSVAKVQEAVVAEYGSEEYAIFLSTLPLEFADRVGISDNGGGHSAEATVIALQYHEGRKAVAVRFTEGRCEWMRQS*
Ga0181538_105626571	3300014162	Bog	EYAIFLSKLALEFDDRVWLVRDGGGRPAEASVVALQYHEGRKAVAVRFLDRPCEWMMCP*
Ga0182035_109698772	3300016341	Soil	SLEAAVIEFASEEFAIFLCRLALEFDDRVELVREGGGRPVEATVIALQYLSGSKAVAVRFLNGPCDWMNNR
Ga0182032_110120721	3300016357	Soil	REYAIFLSKLALEFDDRVRLVRDGIGTPAEAAVIALQYHEGSKAVAVRFLEGPCDWMVHP
Ga0182032_111573681	3300016357	Soil	QSKLQESTVVEFGASEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP
Ga0182040_114117781	3300016387	Soil	VVEFGASEYAIFLSTLPMEFDERIRVIRDGNGRGVEAAVIALQYHEGRKAVAVRFLQGP
Ga0182039_111232262	3300016422	Soil	FLSKLALEFDDRVRIVRQGGGRPAKAAVIALQYHEGRKAVAVRFLGNPCEWMGRE
Ga0187818_100022084	3300017823	Freshwater Sediment	VRGQEATVVEYGTTEYAIFLSKLALEFDDRVRLVRDGGGRPAEAAVIALQYHEGRKAVAVRFLDGPCEWMMHP
Ga0187807_12762581	3300017926	Freshwater Sediment	KVRPYRTGLAKVLETTEVEYGTREYAIFLTRLALEFDDRVQLVRDGGGRPAEATVIALQYHEGRKAVAVRFVDGPCEWMMHT
Ga0187814_100633522	3300017932	Freshwater Sediment	SKLALEFDDRVRLVRDGGRPAEATVIALQYHQGRKAVAVRFLDRPCEWMMCRE
Ga0187801_100416732	3300017933	Freshwater Sediment	VVEFGASEYAIFLSTLPMEFDERVRVTRDGNGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP
Ga0187803_100017514	3300017934	Freshwater Sediment	MVEFGGQECAIFLSKLALEFDDRVQLVRDGGGRPAEAAVIALQYHDGRKAVAVRFLEGPCEWMMKP
Ga0187778_106078561	3300017961	Tropical Peatland	ECAIFLSSLPLEFADRVRVERDGGRPAEAAVIALQYQEGRKAVAVRFLEGPCEWMRQA
Ga0187777_102680581	3300017974	Tropical Peatland	KGHAQARAQEMTVVEFATEEFAIFLCRLPLEFDDRVELVREGGGRPAEAAVIALQYQASSKAVAVRFLNGPCGWIIDP
Ga0187777_113880652	3300017974	Tropical Peatland	IAAKGRAQARAQEMTVVEFATEEFAIFLCRLPLEFDDRVELVREGGGRPAEATVIALQYQASSKAVAVRFLNGPCGWIINP
Ga0187782_1000011032	3300017975	Tropical Peatland	LVEFGSETYAIFLSKLALEFDDRVRLAPDGEGSSAEAAVIALQYHEGRKAVAVRFVDRPCEWMKRT
Ga0187810_100224113	3300018012	Freshwater Sediment	VVEYGTQEFAIFLSNLALEFDDRVRLVRDGGGRSVEAAVIALQYHEGRKAVAVRFLDGPCEWMMHT
Ga0187862_103474411	3300018040	Peatland	TAECAIFLSSLPLEFADRVRVQRDGGGRPAEAAVIALQYQEGRKAVAVRFLEGPCDWMRQ
Ga0187769_108000392	3300018086	Tropical Peatland	YGTEECAIFLSSLPLEFGDRVRVECDGGGLPAEAAVIALRYQEGRKAVAVRFLEGPCEWMRQP
Ga0187771_117492001	3300018088	Tropical Peatland	TEEVAIFLSSLPLEFADRVRLEREGGVRPAEATVIALQYQEGRKAVAVRFLEVPCEWMR
Ga0187770_102816341	3300018090	Tropical Peatland	VVVYGTWEYAIFLSNLALEFDDRVRLAREGGGRSAEAAVIALQYHDGRKAVAVRFLDGPCEWMTQP
Ga0187770_103860642	3300018090	Tropical Peatland	EEVAIFLSSLPLEFADRVRLEREGGGRPAEATVIALQYQEGRKAVAVRFLEVPCEWMR
Ga0187770_105569932	3300018090	Tropical Peatland	RVTPVRQAQERLQERTVLEYGTEECAIFLSSLPLEFGDRVRVECDGGGLPAEAAVIALRYQEGRKAVAVRFLEGPCEWMRQP
Ga0210407_101723321	3300020579	Soil	VRPSPAKLQEATVVEFGSEEFAIFLSTLPLEFDDRVRIVRDGGRPAEAAVIALQYHAGRKAVAVRFLEGRCDWMTQP
Ga0210403_100022721	3300020580	Soil	EFADRVRISDNGGGHSAEATVIALQYHEGRKAVAVRIAEGRCEWMRKS
Ga0210403_100190651	3300020580	Soil	VVEFGGSEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLPGPCDWMQP
Ga0210403_100569745	3300020580	Soil	APLRVGSSPARIQETVVVEYGSEEYAIFLSTLPLEFADRVRISGDGGGHSAEATVIALQYHEGRKAVAIRFVEGRCEWMRQS
Ga0210403_109973712	3300020580	Soil	CAIFLSTLPLEFADRVRISDNGGGHSAEATVIALQYHEGRKAVAVRFAEGRCEWMRQS
Ga0210399_100097042	3300020581	Soil	LQEAAVVEYGSEEYAIFLSTLPLEFADRVCISGGGGGHSAEATVIALQYHEGRKAVAVRFVEGRCEWMRQS
Ga0210406_103258582	3300021168	Soil	EFADRVRISDNGGGHSAEATVIALQYHEGRKAVAVRFTEGRCEWMRQS
Ga0210405_101910511	3300021171	Soil	FLSTLPLEFADRVRISGNGGGRSAEATVIALQYHDGRKAVAVRFVDGRCEWMRQS
Ga0210405_113827841	3300021171	Soil	LREATVVEFGEAEYAIFLSTLPLEFDEHVRLESVPEGRMAEGTVVAVQYHEGRKAVAV
Ga0210408_103696542	3300021178	Soil	RAQESAVVEYGSDECAIFLSTLPLEFADRVRISDNGGGHSAEATVIALQYHEGRKAVAVRFAEGRCEWMRQS
Ga0210397_113074531	3300021403	Soil	FAIFLSTLPLEFADRVRISDNGGGHSAEATVIALQYHEGRKAVAVRFAEGRCEWMRQS
Ga0210386_102430632	3300021406	Soil	SPVRPAPAKLQEATVVEFGSEEFAIFLSTLPLEFDDHVRIVRDGGRPAEAAVIALQYHAGRKAVAVRFLEGRCDWMTQP
Ga0210383_100215905	3300021407	Soil	VLEFGAGEIAIFLSNLPIEFDDRVRLSRGDMKQSVEATVIALQYHQGRKAVAVRFLNGACDWVRQP
Ga0210383_107423571	3300021407	Soil	AIFLSTLPLEFADRVRISDNGGGHSAEATVIALQYHEGRKAVAVRFAEGRCEWMRQS
Ga0210394_102975592	3300021420	Soil	GSEEYAIFLSTLPLEFADRVRISGDGGGHSAEATVIALQYHEGRKAVAIRFVEGRCEWMRQS
Ga0210398_105059751	3300021477	Soil	RLQESAVVEYGSEEYAIFLSTLPLEFADRVCISGNGGGRSAEATVIALQYHEGRKAVAVRFVESRCEWMRQS
Ga0210410_103027711	3300021479	Soil	EYAIFLSTLPLEFADRVRISGDGGGHSAEATVIALQYHEGRKAVAIRFVEGRCEWMRQS
Ga0210409_103367422	3300021559	Soil	QETVVVEYGSEEYAIFLSTLPLEFADRVRISGDGGGHSAEATVIALQYHEGRKAVAIRFVEGRCEWMRQS
Ga0207692_103183871	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RPGQSKLQESTVVEFGAAEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP
Ga0209647_10158781	3300026319	Grasslands Soil	GSEEYAIFLSTLPLEFADRVGISDNGGGHSAEATVIALQYHEGRKAVAVRFTEGRCEWMRQS
Ga0207759_1199802	3300026823	Tropical Forest Soil	YAIFLSNLALEFDDRVRLIRKGTGTPAEAAVIALQYHEGSKAVAVRFLEGPCDWMVHP
Ga0207723_1102992	3300026824	Tropical Forest Soil	GTQEYAIFLSNLALEFDDRVRLIRKGTGTPAEAAVIALQYHEGSKAVAVRFLEGPCDWMVHP
Ga0207728_1093422	3300026833	Tropical Forest Soil	QEATVIEYAAEEFAIFLCRLALEFDDRVELAREGGRPEEAAVIALQYQAGSKAVAVRFVNGPCGWMINP
Ga0207852_10209672	3300026959	Tropical Forest Soil	ATVIEYAAEEFAIFLCRLALEFDDRVELAREGGRPEEAAVIALQYQAGSKAVAVRFVNGPCGWMINP
Ga0207726_10419821	3300027045	Tropical Forest Soil	FAIFLCRLALEFDDRVELVLEGGGRPAEAAVIALQYQAGSKAVAVRFLNGPCDWMNNR
Ga0209622_10541902	3300027502	Forest Soil	ESTVVEYGTPEYAIFLSNLALEFDDRVRLVREGTGRPAEAAVVALQYHEGSKAVAVRFLEGPCDWMVHP
Ga0209219_11378791	3300027565	Forest Soil	RVAPLRAGSSPARLQETAVVEYGSEEYAIFLSTLPLEFADRVRISGNGRGRSAEATVIALQYHDGRKAVAVRFVEGRCEWMRQS
Ga0209625_10105991	3300027635	Forest Soil	RAGSSPARLQESAVVEYGSEEYAIFLSTLPLEFADRVCISGDGGGRSAEATVIALQYHEGRKAVAVRFVEGRCEWMRQS
Ga0209446_10436121	3300027698	Bog Forest Soil	SEFAIFLSKLALEFDDHVRLVRDGGGRPAEAAVIALQYHEGRKAVAVRFLDRPCEWMMCP
Ga0209448_100085602	3300027783	Bog Forest Soil	MVEFGTTDYAIFVSKLALEFDDRVRLVRDGGGHPAEAAVIALQYHGGRKAVAVRFLDRPCEWMMHP
Ga0209139_100671622	3300027795	Bog Forest Soil	VLEFGAGEIAIFLSNLPIEFDDRVRLSRGDMKQSVEATVIALQYHQGRKAVAVRFLNGACDWMRQP
Ga0209167_100183492	3300027867	Surface Soil	MLEFGAGEIAIFLSNLPIEFDDRVRLSRGDMKQSVEATVIALQYHQGRKAVAVRFLNGACDWVRQP
Ga0209275_100014638	3300027884	Soil	VEFGSEEFAIFLSTLPLEFDDRVQIVRDGGRPAEAAVIALQYHAGRKAVAVRFLAGRCDWMTQP
Ga0209415_101369323	3300027905	Peatlands Soil	AIFVSSLPLEFADRVRVERDGGGRPVEAAVIALQYQEGRKAVAVRFLEGPCEWMRQP
Ga0209698_102538631	3300027911	Watersheds	VEFGSEEFAIFLSTLPLEFDDHVRIVRDGGRPAEAAVIALQYHAGRKAVAVRFLEGRCDWMTQP
Ga0308309_101459013	3300028906	Soil	TKLQESAVLDFGAGEIAIFLSNLPIEFDDRVRVSQQDGKRSVEAAVIALQYHEGRKAVAVRFLNGACDWMRQP
Ga0308309_104220572	3300028906	Soil	MLEFGAGEIAIFLSNLPIEFDDRVRLSRGDAKQTVEAAVIALQYHEGRKAVAVRFLNGACDWMRQP
Ga0075405_118234311	3300030847	Soil	VVEFGGSEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVKFLQGPCDWMQP
Ga0075371_106903282	3300030974	Soil	VVEFGATEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLEDPCDWMQP
Ga0170834_1126283412	3300031057	Forest Soil	VVEFGATEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLEGPCDWMQP
Ga0170824_1063372614	3300031231	Forest Soil	VVEFGGSEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAV
Ga0170824_1233332971	3300031231	Forest Soil	EFAIFLSTLPLEFADRVRISDNGGGHSAEATVIALQYHEGRKAVAVRFVEGRCQWMRQS
Ga0306918_103748211	3300031744	Soil	VVEFGASEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP
Ga0307477_104457302	3300031753	Hardwood Forest Soil	RKLKESTVVEYGTPEYAIFLSNLALEFDDRVRLVREGTERPAEAAVIALQYHEGSKAVAVRFLEGPCDWMVHP
Ga0318521_106243462	3300031770	Soil	AIFLSNLALEFDDRVRLIREGMGKPAEAAVIALQYHEGSKAVAVRFLEGPCDWMVHP
Ga0318503_101005861	3300031794	Soil	IFLSNLVLEFDDRVRLTRKGMGKPAEAAVIALQYHEGSKAVAVRFLEGPCDWMVHP
Ga0307473_106883421	3300031820	Hardwood Forest Soil	STLPLEFADRVRISGNGGGRSAEATVIALQYHEGRKAVAVRFVDGRCEWMKQS
Ga0318527_105285632	3300031859	Soil	LRESTVVEYGTREYAIFLSNLALEFDDRVRLIREGMGKPAEAAVIALQYHEGSKAVAVRFLEGPCDWMVHP
Ga0310912_104742172	3300031941	Soil	VVEFGAAEYAIFLSTLPMEFDERIRVIRDGNGRGVEAAVIALQYHEGRKAVAVRFLQGPCDWMQP
Ga0307479_118333122	3300031962	Hardwood Forest Soil	AIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLRGSCDWMQP
Ga0306924_118400601	3300032076	Soil	VVEFGASEYAIFLSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRF
Ga0307471_1000336691	3300032180	Hardwood Forest Soil	IFLSNLALEFDDRVRLVREGTGRPAEAAVIALQYHEGSKAVAVRFLEGPCDWMVHP
Ga0306920_1009185312	3300032261	Soil	VVEFGASEYAIFLSTLPMEFDERVRVTRDGHGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP
Ga0335085_1001397212	3300032770	Soil	YAIFVSTLPLEFADRVRISREGGGRSAEATVIALQYHDGRKAVAVRFQDGPCEWMRQP
Ga0335085_100505992	3300032770	Soil	VIEFASPEFAIFLCRLALEFDDRVELVREGGGRPEEAAVIALQYQAGGKAVAVRFLSGRCDWTNNR
Ga0335085_102650222	3300032770	Soil	VVEFGTGDYAIFLSKLALEFDERVRIVREGGSAAEATVIALQYHQGRKAVAVRFHDRPC
Ga0335079_101245634	3300032783	Soil	VEYATEEFAIFLCRLALEFDDRVELAREGGHPEEAAVIALQYQARSKAVAVRFLNGPCGWMVNP
Ga0335070_107591491	3300032829	Soil	SEEYAIFVSTLPLEFADRVRISREGGGRSAEATVIALQYHDGRKAIAVRFQDGPCEWMRQ
Ga0335069_100084795	3300032893	Soil	VIEFASEEFAIFLCRLALEFDDRVELVREGGGRPAEAAVIALQYQTGSKAVAVRFLNGPCDWMNNR
Ga0335076_100612261	3300032955	Soil	VIEFASSEFAIFLCRLALEFDDRVELVREGGGRPEEAAVIALQYQAGGKAVA
Ga0335076_100642112	3300032955	Soil	VVEFGTGDYAIFLSKLALEFDERVRIVREGGSAAEATVIALQYHQGRKAVAVRFHDRPCEWMLR
Ga0335073_105630012	3300033134	Soil	FASEAYAIFLSKLALEFDDRVRLVRDGGGRPAEAAVIALQYHDGRKAVAVRFLNSPCEWMTSRE
Ga0335077_1000060128	3300033158	Soil	VIEFASEEFAIFLSRLALEFDDRVELVREGGGRPAEAVVIALQYQAGSKAVAVRFLDGPCEWMKNR
Ga0310914_114820912	3300033289	Soil	LSTLPMEFDERVRVIRDGNGRGAEAAVIALQYHEGRKAVAVRFLQGPCDWMQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070581

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences