Metagenome / Metatranscriptome Family F070620

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F070620
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	73 residues
Representative Sequence	MMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR
Number of Associated Samples	102
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.24 %
% of genes near scaffold ends (potentially truncated)	25.20 %
% of genes from short scaffolds (< 2000 bps)	82.11 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (65.854 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (12.195 % of family members)
Environment Ontology (ENVO)	Unclassified (23.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.724 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.98% β-sheet: 0.00% Coil/Unstructured: 51.02%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF03330	DPBB_1	3.25
PF06803	DUF1232	3.25
PF11752	DUF3309	2.44
PF08379	Bact_transglu_N	1.63
PF02566	OsmC	1.63
PF12146	Hydrolase_4	1.63
PF04519	Bactofilin	1.63
PF05425	CopD	1.63
PF08238	Sel1	0.81
PF05532	CsbD	0.81
PF09423	PhoD	0.81
PF15919	HicB_lk_antitox	0.81
PF13545	HTH_Crp_2	0.81
PF03544	TonB_C	0.81
PF12536	DUF3734	0.81
PF17201	Cache_3-Cache_2	0.81
PF03471	CorC_HlyC	0.81
PF09361	Phasin_2	0.81
PF13404	HTH_AsnC-type	0.81
PF00202	Aminotran_3	0.81
PF04366	Ysc84	0.81
PF07927	HicA_toxin	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	3.25
COG1276	Putative copper export protein	Inorganic ion transport and metabolism [P]	1.63
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	1.63
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.63
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.63
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.63
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.81
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.81
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
All Organisms	root	All Organisms	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
cellular organisms	root	All Organisms → cellular organisms	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	4.07 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.44 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.81 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.07 %
Tistrella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella	0.81 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.81 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.81 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.07 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.81 %
Mesorhizobium amorphae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	0.81 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.81 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.81 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.07 %
Mesorhizobium amorphae CCBAU 01583	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae → Mesorhizobium amorphae CCBAU 01583	0.81 %
Caulobacter sp. S45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	0.81 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.81 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.81 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0958570	Not Available	619	Open in IMG/M
3300000567\|JGI12270J11330_10004899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9451	Open in IMG/M
3300000787\|JGI11643J11755_11771912	Not Available	589	Open in IMG/M
3300001535\|A3PFW1_10987849	Not Available	669	Open in IMG/M
3300001593\|JGI12635J15846_10753688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae → Mesorhizobium amorphae CCBAU 01583	559	Open in IMG/M
3300004091\|Ga0062387_101030967	Not Available	633	Open in IMG/M
3300004114\|Ga0062593_101546922	Not Available	717	Open in IMG/M
3300004479\|Ga0062595_100318287	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300004479\|Ga0062595_101244185	Not Available	665	Open in IMG/M
3300004633\|Ga0066395_10501155	Not Available	700	Open in IMG/M
3300005332\|Ga0066388_102018761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	1034	Open in IMG/M
3300005332\|Ga0066388_104903304	Not Available	680	Open in IMG/M
3300005435\|Ga0070714_100586512	Not Available	1069	Open in IMG/M
3300005437\|Ga0070710_10727482	Not Available	703	Open in IMG/M
3300005713\|Ga0066905_101057420	Not Available	719	Open in IMG/M
3300005764\|Ga0066903_100279573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2615	Open in IMG/M
3300005764\|Ga0066903_100451512	Not Available	2149	Open in IMG/M
3300005764\|Ga0066903_107847996	Not Available	548	Open in IMG/M
3300006041\|Ga0075023_100254576	Not Available	703	Open in IMG/M
3300006050\|Ga0075028_100921457	Not Available	539	Open in IMG/M
3300006052\|Ga0075029_100909483	Not Available	604	Open in IMG/M
3300006059\|Ga0075017_101486697	Not Available	533	Open in IMG/M
3300006162\|Ga0075030_101427335	Not Available	542	Open in IMG/M
3300006163\|Ga0070715_10065308	Not Available	1610	Open in IMG/M
3300006175\|Ga0070712_100656079	Not Available	892	Open in IMG/M
3300006354\|Ga0075021_10406726	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300006854\|Ga0075425_100329110	Not Available	1759	Open in IMG/M
3300006871\|Ga0075434_101732242	Not Available	632	Open in IMG/M
3300009156\|Ga0111538_10696350	Not Available	1287	Open in IMG/M
3300009162\|Ga0075423_13108459	Not Available	509	Open in IMG/M
3300009521\|Ga0116222_1002899	All Organisms → cellular organisms → Bacteria → Proteobacteria	8754	Open in IMG/M
3300009521\|Ga0116222_1325453	Not Available	665	Open in IMG/M
3300009522\|Ga0116218_1252897	Not Available	791	Open in IMG/M
3300009523\|Ga0116221_1024312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3107	Open in IMG/M
3300009672\|Ga0116215_1060455	Not Available	1713	Open in IMG/M
3300009683\|Ga0116224_10003162	All Organisms → cellular organisms → Bacteria → Proteobacteria	9262	Open in IMG/M
3300009792\|Ga0126374_10383640	Not Available	976	Open in IMG/M
3300010047\|Ga0126382_10053474	Not Available	2380	Open in IMG/M
3300010358\|Ga0126370_12249184	Not Available	538	Open in IMG/M
3300010362\|Ga0126377_10219666	Not Available	1833	Open in IMG/M
3300010366\|Ga0126379_12746140	Not Available	589	Open in IMG/M
3300010376\|Ga0126381_103564792	Not Available	611	Open in IMG/M
3300010862\|Ga0126348_1278170	Not Available	667	Open in IMG/M
3300011987\|Ga0120164_1041986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300011996\|Ga0120156_1073285	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300012930\|Ga0137407_11853603	Not Available	575	Open in IMG/M
3300012948\|Ga0126375_10199052	Not Available	1313	Open in IMG/M
3300012948\|Ga0126375_11143035	Not Available	644	Open in IMG/M
3300012951\|Ga0164300_11201850	Not Available	503	Open in IMG/M
3300012958\|Ga0164299_10035322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2214	Open in IMG/M
3300012971\|Ga0126369_10108708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2527	Open in IMG/M
3300012971\|Ga0126369_10774350	Not Available	1040	Open in IMG/M
3300013294\|Ga0120150_1071389	Not Available	662	Open in IMG/M
3300013768\|Ga0120155_1019065	All Organisms → cellular organisms → Bacteria → Proteobacteria	2285	Open in IMG/M
3300015264\|Ga0137403_10613172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	953	Open in IMG/M
3300015371\|Ga0132258_10215505	All Organisms → cellular organisms → Bacteria → Proteobacteria	4667	Open in IMG/M
3300015374\|Ga0132255_104953445	Not Available	564	Open in IMG/M
3300016319\|Ga0182033_10017391	All Organisms → cellular organisms → Bacteria → Proteobacteria	4278	Open in IMG/M
3300016341\|Ga0182035_10119710	Not Available	1967	Open in IMG/M
3300016387\|Ga0182040_10621879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300016445\|Ga0182038_10206589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1549	Open in IMG/M
3300016445\|Ga0182038_10671513	Not Available	900	Open in IMG/M
3300017822\|Ga0187802_10133308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	945	Open in IMG/M
3300017823\|Ga0187818_10206589	Not Available	857	Open in IMG/M
3300017926\|Ga0187807_1264403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300017928\|Ga0187806_1034696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	1502	Open in IMG/M
3300017932\|Ga0187814_10074288	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300017932\|Ga0187814_10089153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1135	Open in IMG/M
3300017943\|Ga0187819_10035158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2962	Open in IMG/M
3300017943\|Ga0187819_10097136	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300017943\|Ga0187819_10566004	Not Available	645	Open in IMG/M
3300017955\|Ga0187817_10025332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3560	Open in IMG/M
3300017955\|Ga0187817_10033839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3107	Open in IMG/M
3300017955\|Ga0187817_11024144	Not Available	529	Open in IMG/M
3300017959\|Ga0187779_10296626	Not Available	1033	Open in IMG/M
3300017973\|Ga0187780_10352202	Not Available	1040	Open in IMG/M
3300017974\|Ga0187777_10379744	Not Available	975	Open in IMG/M
3300017974\|Ga0187777_10596449	Not Available	778	Open in IMG/M
3300017995\|Ga0187816_10338701	Not Available	663	Open in IMG/M
3300017999\|Ga0187767_10031397	Not Available	1222	Open in IMG/M
3300018001\|Ga0187815_10263435	Not Available	730	Open in IMG/M
3300018006\|Ga0187804_10463368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	567	Open in IMG/M
3300018057\|Ga0187858_10230967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1195	Open in IMG/M
3300018058\|Ga0187766_10015157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	4391	Open in IMG/M
3300018058\|Ga0187766_10293974	Not Available	1050	Open in IMG/M
3300018060\|Ga0187765_10313080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	945	Open in IMG/M
3300020581\|Ga0210399_10312955	Not Available	1311	Open in IMG/M
3300021560\|Ga0126371_10034701	Not Available	4749	Open in IMG/M
3300021560\|Ga0126371_10668103	Not Available	1187	Open in IMG/M
3300025915\|Ga0207693_10533261	Not Available	916	Open in IMG/M
3300025929\|Ga0207664_11521904	Not Available	591	Open in IMG/M
3300027043\|Ga0207800_1049953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300027379\|Ga0209842_1068795	Not Available	625	Open in IMG/M
3300027562\|Ga0209735_1119481	Not Available	575	Open in IMG/M
3300027568\|Ga0208042_1025502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1523	Open in IMG/M
3300027604\|Ga0208324_1054285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1162	Open in IMG/M
3300027680\|Ga0207826_1130084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300027911\|Ga0209698_11261421	Not Available	542	Open in IMG/M
3300028047\|Ga0209526_10051071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2911	Open in IMG/M
3300031231\|Ga0170824_118231974	Not Available	786	Open in IMG/M
3300031274\|Ga0307442_1003330	All Organisms → cellular organisms → Bacteria	7612	Open in IMG/M
3300031274\|Ga0307442_1039702	Not Available	1537	Open in IMG/M
3300031280\|Ga0307428_1001930	Not Available	9870	Open in IMG/M
3300031360\|Ga0307444_1012439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3156	Open in IMG/M
3300031360\|Ga0307444_1095334	Not Available	922	Open in IMG/M
3300031379\|Ga0307434_1112371	Not Available	772	Open in IMG/M
3300031716\|Ga0310813_12174557	Not Available	525	Open in IMG/M
3300031719\|Ga0306917_10332985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1177	Open in IMG/M
3300031740\|Ga0307468_100211426	Not Available	1324	Open in IMG/M
3300031744\|Ga0306918_10433459	Not Available	1026	Open in IMG/M
3300031833\|Ga0310917_10303117	Not Available	1081	Open in IMG/M
3300031890\|Ga0306925_10180626	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300031890\|Ga0306925_11429079	Not Available	681	Open in IMG/M
3300031890\|Ga0306925_11510319	Not Available	657	Open in IMG/M
3300031897\|Ga0318520_10356279	Not Available	889	Open in IMG/M
3300031910\|Ga0306923_10376384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1618	Open in IMG/M
3300031946\|Ga0310910_11087132	Not Available	623	Open in IMG/M
3300031954\|Ga0306926_12238643	Not Available	607	Open in IMG/M
3300032059\|Ga0318533_10354221	Not Available	1069	Open in IMG/M
3300032205\|Ga0307472_101392538	Not Available	680	Open in IMG/M
3300032261\|Ga0306920_102673725	Not Available	682	Open in IMG/M
3300032261\|Ga0306920_103916921	Not Available	542	Open in IMG/M
3300032515\|Ga0348332_12512160	Not Available	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.12%
Host-Associated	Host-Associated	4.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.73%
Aquatic	Environmental → Aquatic	24.39%
Plants	Host-Associated → Plants	4.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.92%
Freshwater	Environmental → Aquatic → Freshwater	13.82%
Sediment	Environmental → Aquatic → Sediment	5.69%
Marine	Environmental → Aquatic → Marine	4.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.63%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.97%
Loam	Environmental → Terrestrial → Soil → Loam	14.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.69%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.63%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	12.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.44%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	12.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	4.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011987	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027043	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031274	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30	Environmental	Open in IMG/M
3300031280	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-240	Environmental	Open in IMG/M
3300031360	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-40	Environmental	Open in IMG/M
3300031379	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-220	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09585701	2228664022	Soil	MWKKVLLASAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKAAHGVR
JGI12270J11330_100048991	3300000567	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTLADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPK
JGI11643J11755_117719121	3300000787	Soil	MWKKVLLASAVIGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKAAHGVR*
A3PFW1_109878492	3300001535	Permafrost	MLMWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKP*
JGI12635J15846_107536881	3300001593	Forest Soil	AGLGRVTQEGKMLMWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKGQL*
Ga0062387_1010309671	3300004091	Bog Forest Soil	LASAVTALLASVAIPIQTTPADAGRSGCRAAAKLKYPGDSKARKEFRHWCKRQYKIYKAAQKGGSKG*
Ga0062593_1015469222	3300004114	Soil	MMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0062595_1003182871	3300004479	Soil	IGLLAGGAITLHPSAADASRSGCREAAKVKFPADAKARAAYKRYCRSQWKAYKAAHHVR*
Ga0062595_1012441853	3300004479	Soil	SVVVSLLEGRMSMWKKVLLASAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKAAHGVR*
Ga0066395_105011552	3300004633	Tropical Forest Soil	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCEAQWKLYKAAHKR*
Ga0066388_1020187612	3300005332	Tropical Forest Soil	MTWKKVLLASAVTGLLAGVAIPIQSLPAAAAHSGCHKAAKARFPHDRKARHQFKHWCKAQWKLYKAGHKR*
Ga0066388_1049033042	3300005332	Tropical Forest Soil	MRAGKHWLEERMEIHIMMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0070714_1005865121	3300005435	Agricultural Soil	MMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0070710_107274822	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAYKR*
Ga0066905_1010574201	3300005713	Tropical Forest Soil	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAMPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0066903_1002795734	3300005764	Tropical Forest Soil	MMWKKVLFASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0066903_1004515123	3300005764	Tropical Forest Soil	MWKKALLASAVTAFLAGAAVPIHSTPAHACRSGCSKAAKARFPHDRKDRRQFRHWCRGEWKLYKAGHRGRPAKA*
Ga0066903_1078479961	3300005764	Tropical Forest Soil	VTGALAGVAMPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK*
Ga0075023_1002545762	3300006041	Watersheds	MWKKVLLASAVTGLLAGAAVPIQTTPADAARSGCHKFAKARYPHDHTARKAFKHYCKSQWKLYKAARRGGP
Ga0075028_1009214571	3300006050	Watersheds	LLVSAVTGLLAGAMIPIQSTPADAAHSGCHKAAKAKYPGDHKSRKQWRHYCKGQWKIYKAAHKGAPKS*
Ga0075029_1009094832	3300006052	Watersheds	MWKRMLLACAVTGLLAGAAIPIHSTPADAARSGCFKAAKARFPADHKARKQWRHWCKGKWKIYKATHKGAPNT*
Ga0075017_1014866972	3300006059	Watersheds	MWKRMLLACAITGLLAGAAIPIHSTPADAARSGCFKAAKARFPADHKARKQFRHWCKDQWKSYKAAHKGALKT*
Ga0075030_1014273351	3300006162	Watersheds	MWKKMLLVSAVTGLLAGAAIPILSTPADAARSGCFKAAKAQFPGDHKARKQFRHWCKGQWKSYKAAHKGALRT*
Ga0070715_100653084	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0070712_1006560792	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAYKR*
Ga0075021_104067263	3300006354	Watersheds	MWKKVLLVSAVTGLLAGAMIPIQSTPADAAHSGCHKAAKAKYPGDHKSRKQWRHYCKGQ
Ga0075425_1003291103	3300006854	Populus Rhizosphere	MMWKKILLASVVTGALAGVAMPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0075434_1017322421	3300006871	Populus Rhizosphere	MMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAH
Ga0111538_106963503	3300009156	Populus Rhizosphere	MWKKVLLASAVIGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKV*
Ga0075423_131084591	3300009162	Populus Rhizosphere	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAMPIHSTPADAARSGCHKAAKARFPHNHKARHEFKHWCKAQWKLYKAAHKR*
Ga0116222_10028991	3300009521	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTLADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPKT*
Ga0116222_13254531	3300009521	Peatlands Soil	MWKKVLLASAVTGLLAGAAVPIQTTPADAARSGCHKFAKARYPHEHTARKAFKHYCKSQWKLYKAAIGVVLRRRPNLSK*
Ga0116218_12528972	3300009522	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTLADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHK
Ga0116221_10243121	3300009523	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTPADAARSGCFKAARAKFPADHKAQKQWRHWCKGQWKIYKAHKGAPKT*
Ga0116215_10604551	3300009672	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTPADAARSGCFKAARAKFPADHKARKQWRHWCKGQ
Ga0116224_1000316212	3300009683	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTPADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPKT*
Ga0126374_103836401	3300009792	Tropical Forest Soil	MMWKKVLLASVVTGALAGVAIPIQSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK*
Ga0126382_100534742	3300010047	Tropical Forest Soil	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAMPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCEAQWKLYKAAHKR*
Ga0126370_122491841	3300010358	Tropical Forest Soil	MTWKRVLLASAVTGLLAGVAIPIQSLPAAAAHSGCHKAAKARFPHDRKARHQFKHWCKAEWKLYKAGHKR
Ga0126377_102196661	3300010362	Tropical Forest Soil	GKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0126379_127461402	3300010366	Tropical Forest Soil	MMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPRDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0126381_1035647922	3300010376	Tropical Forest Soil	LEGRMEHIMMWKKVLLPSVVTGALAGVAMPIQSTPADAARSGCHKAAKARFPHDHKARHEFKRWCKAQWKLYKAAPQGPFHV*
Ga0126348_12781702	3300010862	Boreal Forest Soil	MEMLMWKKVLLASAVTGLLASVAIPIHSNTAYAVHSGCAEAAKTKFPANPTARKEFKRWCKDQWK
Ga0120164_10419861	3300011987	Permafrost	MWKKVFLASAVTGLLAAAVSLQSTPADAAHSGCSRAAIVKYPSDLTARKEFKHWCKGQWKIYKAAHKGGPKAPA*
Ga0120156_10732851	3300011996	Permafrost	MLMWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKGQL*
Ga0137407_118536031	3300012930	Vadose Zone Soil	MEMLMWKKVLLASAVTGLLASVAIPIHSNTAYAAHSGCAEAAKTKFPANPTARKEFKRWCKDQWKIYKASHP*
Ga0126375_101990523	3300012948	Tropical Forest Soil	MLAGKHWLERTEIRVMMWKKILLASVVAGALAGVAMPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0126375_111430352	3300012948	Tropical Forest Soil	MWKKVLLVSAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKTAHGVR*
Ga0164300_112018502	3300012951	Soil	MWKKVLLASAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYTAAHGVR*
Ga0164299_100353223	3300012958	Soil	MWKKVLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTARRAFKRWCKSQWKLYRAAHRGGPKAPA*
Ga0126369_101087083	3300012971	Tropical Forest Soil	MTWKKVLLASVVTGLLAGVAIPIQSLPAAAAHSGCHKAAKARFPHDRKARHQFKHWCKAQWKLYKAGHKR*
Ga0126369_107743504	3300012971	Tropical Forest Soil	MMWKKVLLASVLTGALAGVAIPIQSTPADAARSGCHKAAKARFPHDQKARHEFKRWCKAQWKLYKAAPQGPFHV*
Ga0120150_10713891	3300013294	Permafrost	MWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKP*
Ga0120155_10190653	3300013768	Permafrost	MWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKGQL*
Ga0137403_106131721	3300015264	Vadose Zone Soil	MEMLMWKKVLLASAVTGLLASVAIPIHSNTAYAAHSGCAEAAKTKFPANPTARKEFKRWCKDQWKIYKASQKADA*
Ga0132258_102155053	3300015371	Arabidopsis Rhizosphere	MWKKVLVASAVTGLLAGAALPLQSIPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKAAHGVR*
Ga0132255_1049534452	3300015374	Arabidopsis Rhizosphere	EIHIMMWKKVLLASVVTGALAGVAIPIQSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAHKR*
Ga0182033_100173914	3300016319	Soil	MWKKMLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTVRRAFKRWCKSQWKAYKAAQRGGPKAPA
Ga0182035_101197102	3300016341	Soil	MERSKPMWKKMLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTARRAFKRWCKSQWKAYKAAQRGGPKAPA
Ga0182040_106218792	3300016387	Soil	MERSKPMWKKMLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTARRAFKRWCKSQ
Ga0182038_102065891	3300016445	Soil	MWKKMLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTVRRAFKRWCKSQWKAYKAAHRGGPNAPA
Ga0182038_106715131	3300016445	Soil	MWKKVLLASVVTGALAGVAMPIQSTPADAARSGCHKAAKARFLHDHKTRHEFKRWCKAQWKLYKAAPQGPFHV
Ga0187802_101333082	3300017822	Freshwater Sediment	MWKKLLLVSAVTGLLAGVAVPIQSTPADAARSGCHKAAKAMFPADRKARKQWRHWCKGQWKIYKAHRRAIKT
Ga0187818_102065892	3300017823	Freshwater Sediment	MWKKVFLVFALTGLLVGATVPIQSTPADAARSGCFRAAKTKFPADHKARKQWRHWCKGKWKIYKATHKGAPNT
Ga0187807_12644031	3300017926	Freshwater Sediment	MWKKVFLVFALTGLLVGATIPIQSTPADAARSGCFRAAKTKFPADHKGRKQWRHWCKGKWKIYKATHKGTPNT
Ga0187806_10346961	3300017928	Freshwater Sediment	MWKKVFLVFALTGLLVGATIPIQSTPADAARSGCFRAAKTKFPADHKARKQWRHWCKGKWKIYKATHKGAPNT
Ga0187814_100742881	3300017932	Freshwater Sediment	KKVFLVFALTGLLVGATIPIQSTPADAARSGCFRAAKTKFPADHKARKQWRHWCKGKWKIYKATRKGAPNT
Ga0187814_100891533	3300017932	Freshwater Sediment	MWKKVFLVFALTGLLVGATIPIQSTPADAARSGCSRAAKTKFPADHKARKQWRHWCKGKWKIYKATHKG
Ga0187819_100351587	3300017943	Freshwater Sediment	MWKRMLLASAVTGLLAGVAIPIHSTPADAARSGCFKAARARFPHDYKARREFRHWCKGQWRLYKAAH
Ga0187819_100971361	3300017943	Freshwater Sediment	MWKKVFLVFALTGLLVGATIPIQSTPADAARSGCFRAAKTKFPADHKARKQWKHWCKGKWKVYKATHKGAPNT
Ga0187819_105660041	3300017943	Freshwater Sediment	MWKKVLLVSAVTGLLAAAAIPIQSTPADAARSGCHKAAKAMFPTDRKARKQWRHWCKGQWKIYKAHKRAIKT
Ga0187817_100253324	3300017955	Freshwater Sediment	MWKKMILASAVTGLLAGVAIPIHSTPAEAARSGCFKAAKARFPHDYKARKAFRHWCKGQWKLYKAAHKGSAH
Ga0187817_100338393	3300017955	Freshwater Sediment	MWKRMLLASAVTGLLAGVAIPIHSTPADAARSGCFKAARARFPHDYKARREFRHWCKGQWRLYKAAHRVGAR
Ga0187817_110241442	3300017955	Freshwater Sediment	MLIMWKRMLLAFAVTGLLAGAAIPIHSTPAEAARSGCFKAAKARFPHDYRARRAFRHWCKSQWKIYKAAHRGSAR
Ga0187779_102966262	3300017959	Tropical Peatland	MLKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKTAAARSPA
Ga0187780_103522022	3300017973	Tropical Peatland	MWKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKGTARPPA
Ga0187777_103797442	3300017974	Tropical Peatland	MLKKVLLASAVTGLLAGASVPIQTTPADAAHSGCYKATKARYPGDRAQRKAFKRWCKSQWKMYKAERKGAPRAGYTAATTSSSNASTAA
Ga0187777_105964491	3300017974	Tropical Peatland	MWKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKAAARPPA
Ga0187816_103387011	3300017995	Freshwater Sediment	MWKKVLLVSAVTGLLAAAAIPIQSTPADAARSGCHKAAKAMFPTDRKARKQWRHWCKGQWKI
Ga0187767_100313972	3300017999	Tropical Peatland	MWKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKAASRPPA
Ga0187815_102634352	3300018001	Freshwater Sediment	LVFALTGLLVGATIPIQSTPADAARSGCFRAAKTKFPADHKARKQWRHWCKGKWKIYKATHKGAPNT
Ga0187804_104633682	3300018006	Freshwater Sediment	MWKKVFLVFALTGLSVGATIPIQSTPADAARSGCSRAAKTKFPVDHKARKQWRHWCKGKWKIYKATHKGAPNT
Ga0187858_102309672	3300018057	Peatland	MWKKVLLVSAVTGLLAGAAIPIQSTPADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPKA
Ga0187766_100151576	3300018058	Tropical Peatland	MWKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKATARPPA
Ga0187766_102939741	3300018058	Tropical Peatland	MLKKVLLASAVTGLLAGASVPIQTTPADAAHSGCHKATKARYPGDRAQRKAFKRWCKSQWKMYKAERKGAPRAGYTAATTSSSNASTAA
Ga0187765_103130801	3300018060	Tropical Peatland	MLKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCHKAAKARYPGDRAQRKAFKRWCKSQWKMYKAERKGAPRAPA
Ga0210399_103129552	3300020581	Soil	MWKKVLLVSAVTGLLAAAAVPIQSTPAHAARSGCHKAAKAMFPADRKVRKQWRHWCKGQWKIYKAHKRAIKT
Ga0126371_100347013	3300021560	Tropical Forest Soil	MMWKKILLASVVTGALAGVAVPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCEAQWKLYKAAHKR
Ga0126371_106681031	3300021560	Tropical Forest Soil	MTWKKVLLASVVTGLLAGVAIPIQSLPAAAAHSGCHKAAKARFPHDRKARHQFKHWCKAQWKLYKAGHKR
Ga0207693_105332612	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLAGKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKLYKAAYKR
Ga0207664_115219041	3300025929	Agricultural Soil	MMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0207800_10499531	3300027043	Tropical Forest Soil	MWKKVLLASAVTGLLAGVAIPMQTTSADAARSGCRHAARAQYPGDRKARRQFRHWCKRQWKIYKKANKGGAKTPA
Ga0209842_10687952	3300027379	Groundwater Sand	SWFWPRWNTQVDASVVVSLLEGRMSMWKKVLLASAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYKAADGVR
Ga0209735_11194811	3300027562	Forest Soil	MLMWKKVLLASAVTGLLASVAIPIHSNTAYAVHSGCAEAAKTKFPANPTARKEFKRWCKDQWKLYKASHKGQL
Ga0208042_10255021	3300027568	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTLADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPKT
Ga0208324_10542852	3300027604	Peatlands Soil	MWKKVLLVSAVTGLLAGAAIPIQSTPADAARSGCFKAARAKFPADHKARKQWRHWCKGQWKIYKAHKGAPKT
Ga0207826_11300841	3300027680	Tropical Forest Soil	MWKKVLLASAITGLLAGVAIPMQTTSADAARSGCRHAARAQYPGDRKARRQFRHWCKRQWKIYKKANKGGAKTPA
Ga0209698_112614212	3300027911	Watersheds	MWKKMLLVSAVTGLLAGAAIPILSTPADAARSGCFKAAKAQFPGDHKARKQFRHWCKGQWKSYKAAHKGALRT
Ga0209526_100510712	3300028047	Forest Soil	MLMWKKVLLASAVTGLLAGTAIPIHPNTAYAAHSGCAEAAKMKFPADPAARKEFKHWCKDQWKLYKASHKGQL
Ga0170824_1182319741	3300031231	Forest Soil	MWKKVLLASAVTGLLAGAAVPMQTTPADAARSGCHKAAKARYPGDHTARKAFKRWCKSQWKLYKAAHRGGPEAPA
Ga0307442_10033304	3300031274	Salt Marsh	MWKKVLLASAVTGLLAAVAIPVQTTPAHASRSGCREAAKARFPYNAAARRDFRRYCKRQWRAYKAAHGVR
Ga0307442_10397022	3300031274	Salt Marsh	MWKKVLFASAVTGLLAVAAIPVQTTPADASRSGCREAAKAQFPYNPRARRDFRRYCKSQWKAYKAAHRVK
Ga0307428_10019309	3300031280	Salt Marsh	MAMWKKVLFASAVTGFLAVAAIPVQTTPADASRSGCREAAKAQFPYNPRARRDFRRYCKSQWKAYKAAHRVK
Ga0307444_10124393	3300031360	Salt Marsh	MAMWKKVLFASAVTGLLAVAAIPVQTTPADASRSGCREAAKAQFPYNPRARRDFRRYCKSQWKAYKAAHRVK
Ga0307444_10953342	3300031360	Salt Marsh	MAMWKKVLFASAVTGFLAVAAIPVQTTPADASRSGCREAAKAQFPYNPRARRDFRRYC
Ga0307434_11123711	3300031379	Salt Marsh	MWKKVLLASAVTELLAAAIPVQTTPADASRSGCREAAKAQFPHHSRARRDFKRYCKSQWKAYKAAHGVK
Ga0310813_121745571	3300031716	Soil	GKHWLERTEIRVMMWKKILLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHEFKHWCKAQWKFYKAAHKR
Ga0306917_103329851	3300031719	Soil	MMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKATHKGAK
Ga0307468_1002114261	3300031740	Hardwood Forest Soil	MWKKVLLASAVTGLLAGAALPLQSTPADASRSGCREAAKVKYPGDPKGRRAYRQYCRSQWKVYTAAHGVR
Ga0306918_104334592	3300031744	Soil	MEIHIMMWKKVLFASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKATHKGAK
Ga0310917_103031172	3300031833	Soil	MMWKKVLFASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0306925_101806261	3300031890	Soil	MWKKMLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTARRAFKRWCKSQWKAYKAAQRGGPKAPA
Ga0306925_114290791	3300031890	Soil	MMWKKVLLASVVTGALAGVAIPIHSTPADAARSGCHKAAKARFPHDHKTRHEFKRWCKAQWKLYKAAPQGPFHV
Ga0306925_115103191	3300031890	Soil	SRIEIHIMMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0318520_103562791	3300031897	Soil	MEIHIMMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0306923_103763843	3300031910	Soil	MEIHIMMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKATHKGAK
Ga0310910_110871321	3300031946	Soil	MIWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0306926_122386431	3300031954	Soil	KQSLGSRMEIHIMMWKKVLLASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKATHKGAK
Ga0318533_103542212	3300032059	Soil	MEIHIMMWKKVLFASAVTGLLAGVAIPIHSTPADAARSGCHKAAKARFPHDHKARHQFKHWCKAQWKLYKAAHKGAK
Ga0307472_1013925382	3300032205	Hardwood Forest Soil	MWKKVLLASAVTGLLAGAAVPIQTTPADAARSGCHKAAKARYPGDHTARKAFKRWCKSQWKLYKTAH
Ga0306920_1026737252	3300032261	Soil	MMWKKVLLASVVTGALAGVAMPIQSTPADAARSGCHKAAKARFLHDHKTRHEFKRWCKAQWKLYKAAPQGPFHV
Ga0306920_1039169212	3300032261	Soil	MWKKVLLASAVTGLLAGAAVPIQTTPADAAHSGCAKAAKARYPGDFHQRKAFKHWCKSQWKMYKAERKGAPRPPA
Ga0348332_125121601	3300032515	Plant Litter	MWKKMLVISAVTGLLAGAAIPILPTPADAARSGCFKAAKAQFPADHKARKQFRHWCKDQWKSYKAAHKGALKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070620

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences