Metagenome Family F070686

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070686
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	105 residues
Representative Sequence	MTSKKPSVPLSAVSLEIGAPELGAPDLTEFRTLIRPFPKDAGERDCYQYLLEQMQATPDRPRRTKAEFEKACRRRFHVRVDSFDYCWREAIKVTGARWDRPGRRPN
Number of Associated Samples	108
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.40 %
% of genes near scaffold ends (potentially truncated)	43.09 %
% of genes from short scaffolds (< 2000 bps)	88.62 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.472 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.634 % of family members)
Environment Ontology (ENVO)	Unclassified (21.951 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.09% β-sheet: 0.00% Coil/Unstructured: 67.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF12728	HTH_17	14.63
PF02195	ParBc	8.94
PF00589	Phage_integrase	8.13
PF13356	Arm-DNA-bind_3	4.88
PF13592	HTH_33	0.81
PF13683	rve_3	0.81
PF06114	Peptidase_M78	0.81
PF03050	DDE_Tnp_IS66	0.81
PF02738	MoCoBD_1	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.47 %
Unclassified	root	N/A	45.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.47 %
Unclassified	root	N/A	45.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.47 %
Unclassified	root	N/A	45.53 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.66 %
Unclassified	root	N/A	45.53 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	51.22 %
Unclassified	root	N/A	45.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	41.46 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.53 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	18.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.81 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.53 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.25 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	2.44 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	2.44 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.81 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.53 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.63 %
unclassified Nitrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %
Afipia carboxidovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	0.81 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.81 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.81 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.81 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.53 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	1.63 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.81 %
Afipia carboxidovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	0.81 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.81 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.81 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908038\|B3_all_c_ConsensusfromContig165041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	622	Open in IMG/M
2124908040\|B4_c_ConsensusfromContig43814	Not Available	917	Open in IMG/M
2140918008\|ConsensusfromContig269348	Not Available	647	Open in IMG/M
2170459012\|GOYVCMS02JH19L	Not Available	546	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100842213	Not Available	878	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105652233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1894	Open in IMG/M
3300000956\|JGI10216J12902_113471695	Not Available	693	Open in IMG/M
3300000956\|JGI10216J12902_120652996	Not Available	610	Open in IMG/M
3300001397\|JGI20177J14857_1016563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1100	Open in IMG/M
3300001536\|A1565W1_10623180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	720	Open in IMG/M
3300001537\|A2065W1_10031510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	882	Open in IMG/M
3300004080\|Ga0062385_10987937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	564	Open in IMG/M
3300004643\|Ga0062591_101371574	Not Available	699	Open in IMG/M
3300005332\|Ga0066388_103578012	Not Available	793	Open in IMG/M
3300005332\|Ga0066388_107322099	Not Available	554	Open in IMG/M
3300005436\|Ga0070713_101291972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	707	Open in IMG/M
3300005543\|Ga0070672_101448043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	615	Open in IMG/M
3300005544\|Ga0070686_101882686	Not Available	510	Open in IMG/M
3300005555\|Ga0066692_10915210	Not Available	537	Open in IMG/M
3300005614\|Ga0068856_101039127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	837	Open in IMG/M
3300005764\|Ga0066903_101426885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1302	Open in IMG/M
3300005938\|Ga0066795_10004900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	3449	Open in IMG/M
3300005947\|Ga0066794_10025493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1727	Open in IMG/M
3300005995\|Ga0066790_10352541	Not Available	628	Open in IMG/M
3300006055\|Ga0097691_1046900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1530	Open in IMG/M
3300006642\|Ga0075521_10097075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1347	Open in IMG/M
3300006642\|Ga0075521_10422131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300006797\|Ga0066659_10741456	Not Available	806	Open in IMG/M
3300006844\|Ga0075428_102164468	Not Available	574	Open in IMG/M
3300006864\|Ga0066797_1018231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2441	Open in IMG/M
3300006871\|Ga0075434_101473770	Not Available	690	Open in IMG/M
3300006893\|Ga0073928_10251064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1352	Open in IMG/M
3300009012\|Ga0066710_102395249	Not Available	766	Open in IMG/M
3300009012\|Ga0066710_103399420	Not Available	605	Open in IMG/M
3300009029\|Ga0066793_10061560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2139	Open in IMG/M
3300009137\|Ga0066709_100310208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2148	Open in IMG/M
3300009521\|Ga0116222_1502848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	531	Open in IMG/M
3300009524\|Ga0116225_1429579	Not Available	587	Open in IMG/M
3300009660\|Ga0105854_1140491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	774	Open in IMG/M
3300010337\|Ga0134062_10697788	Not Available	533	Open in IMG/M
3300010339\|Ga0074046_10349944	Not Available	900	Open in IMG/M
3300010341\|Ga0074045_10841024	Not Available	580	Open in IMG/M
3300010379\|Ga0136449_100375660	All Organisms → cellular organisms → Bacteria → Proteobacteria	2538	Open in IMG/M
3300012198\|Ga0137364_11275277	Not Available	548	Open in IMG/M
3300012199\|Ga0137383_10140359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1767	Open in IMG/M
3300012200\|Ga0137382_11029827	Not Available	590	Open in IMG/M
3300012201\|Ga0137365_10590908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	814	Open in IMG/M
3300012201\|Ga0137365_10989433	Not Available	610	Open in IMG/M
3300012202\|Ga0137363_10493412	Not Available	1028	Open in IMG/M
3300012204\|Ga0137374_10142667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2156	Open in IMG/M
3300012205\|Ga0137362_10028359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4408	Open in IMG/M
3300012205\|Ga0137362_10573379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	974	Open in IMG/M
3300012210\|Ga0137378_10495004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1129	Open in IMG/M
3300012210\|Ga0137378_11098889	Not Available	710	Open in IMG/M
3300012212\|Ga0150985_119413490	Not Available	537	Open in IMG/M
3300012354\|Ga0137366_10261409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1281	Open in IMG/M
3300012355\|Ga0137369_10312878	Not Available	1160	Open in IMG/M
3300012362\|Ga0137361_10635439	Not Available	977	Open in IMG/M
3300012532\|Ga0137373_10581610	Not Available	846	Open in IMG/M
3300012923\|Ga0137359_10294555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1445	Open in IMG/M
3300012923\|Ga0137359_10489333	Not Available	1086	Open in IMG/M
3300012923\|Ga0137359_10691523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	889	Open in IMG/M
3300012955\|Ga0164298_10234148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1097	Open in IMG/M
3300012955\|Ga0164298_11668610	Not Available	505	Open in IMG/M
3300012957\|Ga0164303_10544886	Not Available	752	Open in IMG/M
3300012958\|Ga0164299_10588054	Not Available	758	Open in IMG/M
3300012972\|Ga0134077_10295172	Not Available	680	Open in IMG/M
3300012987\|Ga0164307_11337553	Not Available	600	Open in IMG/M
3300012987\|Ga0164307_11825219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	515	Open in IMG/M
3300012989\|Ga0164305_11552892	Not Available	589	Open in IMG/M
3300013501\|Ga0120154_1143862	Not Available	539	Open in IMG/M
3300013763\|Ga0120179_1045274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1014	Open in IMG/M
3300014164\|Ga0181532_10250218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1019	Open in IMG/M
3300014164\|Ga0181532_10315530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	882	Open in IMG/M
3300014165\|Ga0181523_10214226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1110	Open in IMG/M
3300014200\|Ga0181526_10398892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	873	Open in IMG/M
3300014501\|Ga0182024_12110445	Not Available	619	Open in IMG/M
3300014838\|Ga0182030_10077163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4858	Open in IMG/M
3300015371\|Ga0132258_11903563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1497	Open in IMG/M
3300015373\|Ga0132257_104385664	Not Available	513	Open in IMG/M
3300015374\|Ga0132255_101531772	Not Available	1009	Open in IMG/M
3300016445\|Ga0182038_10282627	Not Available	1349	Open in IMG/M
3300018482\|Ga0066669_10419702	Not Available	1139	Open in IMG/M
3300021403\|Ga0210397_11467488	Not Available	530	Open in IMG/M
3300021405\|Ga0210387_11883814	Not Available	502	Open in IMG/M
3300021478\|Ga0210402_10525703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1098	Open in IMG/M
3300022557\|Ga0212123_10356840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	997	Open in IMG/M
3300025481\|Ga0208079_1007936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4130	Open in IMG/M
3300025481\|Ga0208079_1082402	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300025482\|Ga0208715_1052373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	742	Open in IMG/M
3300025484\|Ga0208587_1038753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1249	Open in IMG/M
3300025553\|Ga0208080_1032669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1549	Open in IMG/M
3300025579\|Ga0207927_1088894	Not Available	715	Open in IMG/M
3300025581\|Ga0208355_1038367	All Organisms → cellular organisms → Bacteria → Proteobacteria	1248	Open in IMG/M
3300025619\|Ga0207926_1048997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1174	Open in IMG/M
3300025725\|Ga0209638_1031954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2342	Open in IMG/M
3300025829\|Ga0209484_10097831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	678	Open in IMG/M
3300025852\|Ga0209124_10038774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1975	Open in IMG/M
3300025864\|Ga0209429_10282032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	644	Open in IMG/M
3300025878\|Ga0209584_10115977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	996	Open in IMG/M
3300026067\|Ga0207678_11576188	Not Available	579	Open in IMG/M
3300026271\|Ga0209880_1049913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	919	Open in IMG/M
3300026272\|Ga0209913_1106809	Not Available	578	Open in IMG/M
3300027737\|Ga0209038_10152399	Not Available	700	Open in IMG/M
3300027829\|Ga0209773_10200296	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300028047\|Ga0209526_10075010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2380	Open in IMG/M
3300028710\|Ga0307322_10220461	Not Available	521	Open in IMG/M
3300028796\|Ga0307287_10236587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	692	Open in IMG/M
3300028802\|Ga0307503_10930293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	505	Open in IMG/M
3300028875\|Ga0307289_10018067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2713	Open in IMG/M
3300028876\|Ga0307286_10149753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	835	Open in IMG/M
3300028884\|Ga0307308_10332226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	728	Open in IMG/M
3300031545\|Ga0318541_10371023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300031573\|Ga0310915_10274807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1188	Open in IMG/M
3300031736\|Ga0318501_10731953	Not Available	546	Open in IMG/M
3300031912\|Ga0306921_10800544	Not Available	1076	Open in IMG/M
3300031912\|Ga0306921_10986499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	951	Open in IMG/M
3300031942\|Ga0310916_11711689	Not Available	508	Open in IMG/M
3300031954\|Ga0306926_12109245	Not Available	630	Open in IMG/M
3300032076\|Ga0306924_10014668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8166	Open in IMG/M
3300032160\|Ga0311301_10082574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6560	Open in IMG/M
3300032174\|Ga0307470_11808153	Not Available	517	Open in IMG/M
3300032892\|Ga0335081_11642163	Not Available	704	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.68%
Host-Associated	Host-Associated	7.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.37%
Aquatic	Environmental → Aquatic	7.32%
Plants	Host-Associated → Plants	7.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.37%
Freshwater	Environmental → Aquatic → Freshwater	5.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.25%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.69%
Loam	Environmental → Terrestrial → Soil → Loam	4.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.25%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.08%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	19.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.44%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.63%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	13.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.06%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.25%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.25%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.44%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.63%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.81%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908040	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4	Environmental	Open in IMG/M
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001397	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025829	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026272	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_all_c_01242710	2124908038	Soil	MTSKKPSIPLSPVSLEKGAPELGTPDLTEFRTVIRPFPKDAAERDCYQHLLEQMQATPDRAPGPKVDFENSCRRQFRVTVDSFQYCWREAIELTGACWDQPGRRPR
B4_c_04716640	2124908040	Soil	MXXKKPSIPXSXVSLETGXPXFGPSDLTEFRTXXRPFPXXAGERDCYQXLLEQMXATPDRPPGXKXXXEXSXRQXFXVXVXSFQYCWRE
Bog_all_C_01932190	2140918008	Soil	MPAKKPSILSAVSLETGAPELGPSDLTEFRTFTRPFPKDAGERDCYQFLLEQMQAAPDRPRGNKAEFEDTCRWRFRVTVESFQYCWREAIELTGACWDQPGRRPK
N56_06215880	2170459012	Grass Soil	MPTTKPSIFPVSLETGGPEFSAPDLTELRTTIRPFPEDAAERDCYRYLLKQMQATPDRPRATKAELKKTCRRRFRITVDSFDYCWREAIKASGARWAQPGRRPRYEIF
INPhiseqgaiiFebDRAFT_1008422132	3300000364	Soil	MPAKKPPISLSPCSLETGAPELDTPDFTEIRNVPRPFPENAAERACYQYLLEQMQAAPGGPHQTKDELEEICRRRFHVTVESFDYCWREANKVTGAGWDQPGRPSRQKLSR*
INPhiseqgaiiFebDRAFT_1056522332	3300000364	Soil	MKRRKKARFPASSLTPVNLETGAYQLGAPDLTEHRTVIRPFPKDERERACYQYLLEQMHAAPDRPCGTKAELKATCRRRFHVTKDSFEYCWREAIEVTGALWDQPGRRPKKFNR*
JGI10216J12902_1134716952	3300000956	Soil	TVLRRLLACMPAKKPPISLSSRSLETGVPEVGTADFTEIRNVPRPFPENAAERACYKYLLGQMQATPDRPYGTKAEFEKTCRRRFHVTKGSFEYCWREAIKVTGARWDQPGRPRR*
JGI10216J12902_1206529962	3300000956	Soil	LETGAPELGAADFTEVRKVPRPFPKDAGERDCYRYLLGQMQATPDHPHGTKAEFESTCRRRFHVTADSFDYCWREAIKVSGAGWDQPGRPPRKKSSR*
JGI20177J14857_10165632	3300001397	Arctic Peat Soil	MPAKKPSITLSAVSLVTGAPVIGTPDLTELRTLIRPFPKDPGERGCYQYLLEQMHSTSDRPRRTKAEFEKTCRRRFHVTVDSFNYCWREAIKVTGTRWDQPGRRPS*
A1565W1_106231801	3300001536	Permafrost	MTSKKPSIPLSAVSLEKGTPEFGPSDLTEFRTRIRPFPKDVGERDCYQYLLEQMRATPDRPPGPKVDFENSCRRRFRVNVESFEYCW
A2065W1_100315102	3300001537	Permafrost	MTSKKPSIPLSAVSLETGTPEFGPSDLTEFRTRIRPFPKDVGERDCYQYLLEQMRATPDRPPGPKVDFENSCRRRFRVNVESFEYCWREAIKITGACWDRPGRPSKEFSR*
Ga0062385_109879371	3300004080	Bog Forest Soil	EFGTPDLTELRTVIRPFPKDAAERDCYRYLLEQMQATPGHPRARKGEFKKTCRRRFHVTVDGFEYCWREAIKASGARWHMPGRRPAKSF*
Ga0062591_1013715742	3300004643	Soil	RRLLACMPAMKPSISLFAVCLETGVPELGTPDPTEIRTLRRPFPKDAGERGCYRYLLEQMQATPDRARGTKAELEKMCRRQFHVAVESFEYCWREAIKVTGARWDRPGRRPR*
Ga0066388_1035780122	3300005332	Tropical Forest Soil	TVLRRLLACMPAKKPPIPLSPRSLETGAPEVGAPDFTEIRKVPRPFPENAAERACYQYLLKQMQAAPDGPHRRKDEFEEICRRRFHVTVDSFDYCWREANKVTNAGWDQPGRPSREKRSS
Ga0066388_1073220991	3300005332	Tropical Forest Soil	MPATISLFAVNLETGRPELGTPDLTELRNVEVRPFPKDARERRCYRYLLREMQAGRNRPRRTKAKVKKICRSRFYVTVESFEYCWREAIDVSGADWNRPGRRPRENFFT
Ga0070713_1012919721	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KASAPGLGTPDLTEFRRVVRPFSKDAGERDCYRYLLDHMQASPERPDRTKADFERVCRRRFRVTVDSFDYCWREANKVSGAHWDQPGRRPR*
Ga0070672_1014480431	3300005543	Miscanthus Rhizosphere	VLRRLLAGMPPTKPIPLSASNLEAGAPEFGASDLAEHRIQVRPFPQDTGERECYQYLQKQMQATPDRPRETKAAFQKTCRRRFRVTAGSFDYCWREAIKVTGARWDQPGRR
Ga0070686_1018826861	3300005544	Switchgrass Rhizosphere	SYSTAGVRRLRPAVFRRLLAFVPTVKPPMSLSIVSLEMGAPEIGTADFTEIRNVPRPFPKDAGERRCYQYLLHRMQASPDHPFGTKAECKGACRRRFLVTVDSFEYCWREAIKATGARWNQPGRRPS*
Ga0066692_109152101	3300005555	Soil	MPATKSSISLSAVSLETGPPEFATPDLTEIRHILRPFPKDPGERACYRYLLEQMRAAPDRPPRRKAEYEKFCRHRFRVTVESFDYCWREAIKASGARWDQPGRPSR*
Ga0068856_1010391272	3300005614	Corn Rhizosphere	MRGKKTSTSLSTVDPEVGAPEFGSPEFTELRTITRPFPKDTGERRCYEYLLKQMQASPNRAPQTKAALERHCRSRFRVTVESFEYCWREAIQASGSTWDQPGRRSRENFSS*
Ga0066903_1014268852	3300005764	Tropical Forest Soil	MPATETPVSLSAASLETGAPELGTADLTELRIVIRPFPRDDGERDCYRYLVEQMQATPNRPRGTRAEFEKTCRSRFHVTVGSFDYCWREAIKVTGARWDQHGRRPR*
Ga0066795_100049003	3300005938	Soil	LCLTVFRRLLACMPAKKPSISLATAGLETAAPAVSTPDLTEHRPFIRRFPKDAGERDCYQYLLDQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKVTGARWDKPGRRPR*
Ga0066794_100254932	3300005947	Soil	LCLTVFRRLLACMPAKKPSISLATAGLETAAPAVSTPDLTEHRPFIRRFPKDAGERDCYQYLLDQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKLTGARWDQP
Ga0066790_103525411	3300005995	Soil	MPTTKPSISPSAVSPETGAPEFGAPDLTERHTFRREFPKDARERDCYRYLLEQMQATPDRPRATKAEFEKTCRKRFHVTVGSFEFCWREAIKTSGAGWDQPGRRPR*
Ga0097691_10469003	3300006055	Arctic Peat Soil	MTSKKPSIPLSPVSLETGTPEFGPSDLTEFRTRIRPFPKDVGERDCYQYLLEQMRATPDRAPGPKVDFENSCRRQFRVNVESFEYCWREAIKITGACWDRPGRRPSKEFSR*
Ga0075521_100970752	3300006642	Arctic Peat Soil	MTSKKPSIPLSAVSLETGTPEFGPSDLTEFRTRIRPFPKDVGERDCYQYLLEQMRATPDRAPGPKVDFENSCRRQFRVTVDSFQYCWREAIELTGACWDQPGRRPR*
Ga0075521_104221312	3300006642	Arctic Peat Soil	MPAKKPSIPLSTVSLETGAPQFGPSDLTEFRNIPRPFPKNAGERDCYQYLLEQMQATPDRPPGRKVEFANNCRRRFHVNVDSFEYCWREAIKVTGARWDQPGRRPSE*
Ga0066659_107414562	3300006797	Soil	MPATKSSTSLSGVSLETGPPDFATPDLTEIRLIQRPFPKDPGERACYRYLLEQMRTAPDRPPQRKAEYETFCRHRFRVTVDSFDYCWREAIKASGARWDQPGRPSR*
Ga0075428_1021644681	3300006844	Populus Rhizosphere	MPATKPPVSLSAVSLATSLPEIGTPDFTELRTLIRPFPKDDGERDCYRYLLEQMQASPDRPRGTRAEWERTCRVRFHVTVVSFDYCWPEAIKVTGSRWNQHGRRPR*
Ga0066797_10182314	3300006864	Soil	LCLTVFRRLLACMPAKKPSISLATAGLETAAPAVSTPDLTEHRPFIRRFPKDAGERDCYQYLLDQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKITGARWDKPGRRPR*
Ga0075434_1014737702	3300006871	Populus Rhizosphere	GRPWRVASHCTQAFTGRCMPAKKPPELAPRSLETGAPELGTPDFTEIRNVPRPFPENAAERACYHYLLEQMQAAPDGPHQRKDELEEICRRRFHVTVDSFDYCWREANKVTGAGWDQPGRPSRQKLSR*
Ga0073928_102510642	3300006893	Iron-Sulfur Acid Spring	MPRKPAISVPAVSLETHAPGLGAPDLTENRIVRRPFPKDAGERDCYRYLLEQMQASPDHPRGTKPEFKRTCRRQYHVTVDSFEYCWREAVKVTGARWDQPGRRPR*
Ga0066710_1023952491	3300009012	Grasslands Soil	TGAPELGTPDFTEIRNVPRPFPENAAERACYQYLLEQMQAAPDGPHRRKDEFEEICRRRFHVTVDSFDYCWREANKVTNAGWDQPGRPSREKRSS
Ga0066710_1033994202	3300009012	Grasslands Soil	AKASISVAAAILETGAPELGMVDLTELRNVPRPFPKDDGERDCYRYLVEQMQASPNRPRGTKAECEKTCRSRFHVTLESFRYCWREAIKVTCARWDQRGRRPR
Ga0066793_100615602	3300009029	Prmafrost Soil	MPAKKPSISLATAGLETAAPAVSTPDLTEHRPFIRRFPKDAGERDCYQYLLDQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKVTGARWDKPGRRPR*
Ga0066709_1003102082	3300009137	Grasslands Soil	MPAKKPPISLSPCSLETGPPELGTPDFTEIRNVPRPFPENAAERACYQYLLQQMQAAPDGPHRRKDEFEEICRRRFHVTVDSFDYCWREANKVTNAGWDQPGRPSREKRSS*
Ga0116222_15028481	3300009521	Peatlands Soil	LDTPDPTERRSLIRPFPKDAGERGCYQYLLAQMQASPNHSRGTKAGFEKTCQRRYHVTVDSFDYCWREAIKVTGARWDQPRGAAPAKDSFR*
Ga0116225_14295792	3300009524	Peatlands Soil	MPATKPSIGLSAVSLETGAPKLDTPDPTERRSLIRPFPKDAGERGCYQYLLAQMQASPDHSRGTKAEFEKTCRRRYHVTVDSFDYCWREAIKVTGARWDQPGRRPG*
Ga0105854_11404912	3300009660	Permafrost Soil	MTSKKPSIPLSAVSLEKGTPEFGPSDLTEFRTRIRPFPKDVGERDCYQYLLEQMRATPDRPPGPKVDFENSCRRRFRVNVESFEYCWREAIKITGACWDRPGRRPSKEFSR*
Ga0134062_106977881	3300010337	Grasslands Soil	MPAKKRPISLSPRSLETGAPELGTPDFTEIRNVPRPFPENAAERACYQYLLQQMQAAPDGPHRKKDEFEEICRRRFHVTVDSFDYCWREANKVTNAGWDQPGRPSREKRSS*
Ga0074046_103499443	3300010339	Bog Forest Soil	MLAQKSPASLFAVSLETGRPELGTPDLTEFRKVIRPFPKNAAERDCYRYLLEQMQATPNRPPETRAEFENTCRQRFHVTAGSFDYCWREAIKVSGARWDQPGRPSR
Ga0074045_108410242	3300010341	Bog Forest Soil	AVSLETRGPGFGAPDLTELRTVVTPFPKNAGERDCYRYLLKQMQAAPGLPRATKSEFEETCRRRFRVTLGSFEYCWREAISASGARWGQPGRRPR*
Ga0136449_1003756603	3300010379	Peatlands Soil	MPATKPSIGLSAVSLETGAPKLDTPDPTERRSLIRPFPKDAGERGCYQYLLAQMQASPDHSRGTKAEFEKTCRRRYHVTVDSFDYCWREAIKVTGARWDQPRGAAPAKDSFR*
Ga0137364_112752772	3300012198	Vadose Zone Soil	LETGAAELGKPDFTEFRKVLRPFPKDDAGERDCYRYLLEQMQATPDRPHGTKAEFERICRWRFHVMVESFEYCWREA
Ga0137383_101403592	3300012199	Vadose Zone Soil	MPAKKPPISLTPRSLETGAPELGTPDFTEIRNVPRPFPENAAERACYQYLLQQMQAAPDGPHRRKDEFEEICRRRFHVTVDSFDYCWREANKVTNAGWDQPGRPSREKRSR*
Ga0137382_110298271	3300012200	Vadose Zone Soil	LETGAPELGTPDFTEIRNVPRPFPKDAAERACYQYLLEQMQAAPDSPHQRKDELEEFCRRRFRVTVESFEYCWREANKVTNAGWDQPGRPSR*
Ga0137365_105909081	3300012201	Vadose Zone Soil	PAKKPPISLSPRSLEPGPPELGTPDFTEIRNVPRSFPENAAERACYQYLLQQMQAAPDGPHRRKDEFEEICRRRFHVTVDSFDYCWREANKVTNAGWDQPGRPSREKRSS*
Ga0137365_109894331	3300012201	Vadose Zone Soil	LETGAPERGTPDFTEIRNVPRPFPENAAERACYQYLLEQMQAAPDGPHQRKDELKEICRRRFHVTVDSFDYCWREANKVTGAGWDQPGRPSRQKLAR*
Ga0137363_104934122	3300012202	Vadose Zone Soil	MPAKKPPISLTPRSLETGAPELGTPDFTEIRNVPRPFPENAAERACYQYLLEQMQGAPDGPHQRKDELEEFCRRRFDVTVESFDYCWREANKVTGAGWDQPGRPSRQKPSR*
Ga0137374_101426671	3300012204	Vadose Zone Soil	MLAHKLFALSLETGPPELGTPDFTEIRNVPRPFPKDAGERDCYRYLLEEMRATPDCRPRRKAEFEKICRDRFRVTVDSFEYCWREAIKVSGARWDQPGRPPR*
Ga0137362_100283593	3300012205	Vadose Zone Soil	MPAKKPPISLTPRSLETGAPELGTPDFTEIRNVPRPFPENAAERACYQYLLEQMQGAPDGPRQRKEELEEFCRRRFDVTVESFDYCWREANKVTGAGWDQPGRPSRQKPSR*
Ga0137362_105733792	3300012205	Vadose Zone Soil	MPAMKSSISLSAVSLETGPPEFATPDLTEIRHILRPFPKDPGERACYRYLLEQMRAAPDRPPRRKAEYEKFCRKHFRVTVDSFDYCWREGIKVSGARWDQPGRPSR*
Ga0137378_104950043	3300012210	Vadose Zone Soil	VKTGAPEFGTPDLTELRIFTRPFPKDAGERRCYQYLLERMQASPDRPRGTKAEFEETCRFRLFYVTLDSFEYCWREAIKVSGANWDQPGRRPR*
Ga0137378_110988891	3300012210	Vadose Zone Soil	VKTGALEFGTPDLTELRTHIRPFPKDAEERDCYQYLLEQMQATPDRPRRTKAEFEETCRWRFHVTVDSFDYCWREAIKVTGARWDQPGRRPR*
Ga0150985_1194134901	3300012212	Avena Fatua Rhizosphere	MPAMNPFISLSGVSVEVSAPKLGMPDFTEMRSVPRPFPKDAGERNCYRYLLEQMQATPNRPHGRKAEFEEICRPRFSVTAHSFDYCWREAIKVSGARWDQPGRPPKTSLS*
Ga0137366_102614092	3300012354	Vadose Zone Soil	LEPGPPELGTPDFTEIRNVPRPFPENAAERACYQYLLQQMQAAPDGPHRRKDEFEEICRRRFHVTVDSFDYCWREANKVTNAGWDQPGRPSREKRSR*
Ga0137369_103128781	3300012355	Vadose Zone Soil	LETGAPERGTPDFTEIRNVPRPFPENAAERACYQYLLEQMQAAPDGPHQRKDELEEICRRRFHVTVDSFDYCWREANKVTGAGWDQPGRPSRQKLAR*
Ga0137361_106354391	3300012362	Vadose Zone Soil	MPATKSSISLSAVSLETGPLEFATPDLTEIRHILRPFPKDPGERACYRYLLEQMRAAPDRPPRRKAEYEKFCRKHFRVTVDSFDYCWREAIKASGARWDQPGRPSR*
Ga0137373_105816102	3300012532	Vadose Zone Soil	EPGPPELGTPDFTEIRNVPRPFPENAAERACYQYLLKQMQAAPDGPHRRKDEFEEICRRRFHVTVDSFDYCWREANKVTGAGWDQPGRPSRQKLAR*
Ga0137359_102945552	3300012923	Vadose Zone Soil	MPAKKPPISLTPRSLETGAPELGTPDFTEIRNVPRPFPENAAERACYQYLLEQMQGAPDGPHQRKDELEEFCRRRFDVRVESFDYCWREANKVTGAGWDQPGRPSRQKPSR*
Ga0137359_104893332	3300012923	Vadose Zone Soil	MPATKSSISLSAVSLETGPPEFATPDLTEIRHILRPFPKDPGERACYRYLLEQMRAAPDRPPRRKAEYEKFCRKHFRVTVDSFDYCWREGIKVSGARWDQPGRPSR*
Ga0137359_106915232	3300012923	Vadose Zone Soil	LKTGAPELGTADLTELRTLIRPFPKDAGERDCYQYLLEQMQSTPDRPRGTKAEFKKTCRRRFHVTVDSFDYCWREAIKVAGARWDQPGRRPH*
Ga0164298_102341482	3300012955	Soil	MHANDETVIALTAVSLEVGPPEFGKPDLTELRILIRPFPKDAEERGCYRYLLEQMQATPDRPRGTKPELERTCRSLFHVTVDSFEYCWREAIKVTGARWDQPGRRPL*
Ga0164298_116686101	3300012955	Soil	KRHCPSATSLKASAPGLGTPDLTEFRRVVRPFSKDAGERDCYRYLLDHMQASPERPDRTKADFERVCRRRFRVTVDSFDYCWREANKVSGAHWDQPGRRPR*
Ga0164303_105448862	3300012957	Soil	MPAKKPSITLSAVSLVTGAPVIGTPDLTELRTLLRPFPKDPGERGCYQYLLEQMHSTSDCPRRTKAEFEKTCRRRFHVTVDSFNYCWREAIKTTGAGWDQPGRPPREKISR*
Ga0164299_105880541	3300012958	Soil	GAPKVGTPDLTELRILIRPFPKDARERDCYQYLLKPMQATSDRPRGTKAEFKQICRRRFHVTVDSFEYCWREAILASGASWDQPGRRPR*
Ga0134077_102951721	3300012972	Grasslands Soil	PELGTPDFTEIRNVPRPFPENAAERACYQYLLKQMHAAPDGPHRRKDEFEEICRRRFHVTVDSFDYCWREANKVTNAGWDQPGRPSREKRSS*
Ga0164307_113375531	3300012987	Soil	SLKASAPGLGTPDLTEFRRVVRPFPKDAGERDCYRYLLDHMQASPERPDRTKADFERVCRRRFRVTVDSFDYCWREANKVSGAHWDQPGRRPR*
Ga0164307_118252191	3300012987	Soil	TAVSLEVGPPEFGKPDLTELRILIRPFPKDAEERGCYRYLLEQMQATPDRPRGTKPELERTCRSLFHVTVDSFEYCWREAIKVTGARWDQPGRRPL*
Ga0164305_115528921	3300012989	Soil	MHANDETVIALTAVSLEVGPPEFGKPDLTELRILIRPFPKDAEERGCYRYLLEQMQATPDRPRGTKPELERTCRSLFHVTVDSFEYCW
Ga0120154_11438621	3300013501	Permafrost	SKKPSIPLSAVSLETGTPEFGPSDLTEFRTRIRPFPKDVGERDCYQYLLEQMRATPDRAPGPKVDFENSCRRQFRVNVESFEYCWREAIKITGACWDRPGRPSKEFSR*
Ga0120179_10452741	3300013763	Permafrost	MTSKKPSIPLSAVSLETGTPEFGPSDLTEFRTRIRPFPKDVGERDCYQYLLEQMRATPDRPPGPKVDFENSCRRQFRVNVESFEYCWREAIKITGACWDRPGRRPSKKFSR*
Ga0181532_102502183	3300014164	Bog	LRLTVFGRLLACMPAKKPSISLSKAGLKTAAPELDAPDLTEFRTLIRPFPKDAGERACYQYLVEQMQATPDRPRETKAEFEKTCRWRFNVTVDSFDYCWRESIKITGALWDQPGRRPS*
Ga0181532_103155301	3300014164	Bog	VSLETGGPEIGAPDLTELRTVIRPFPKDARERDCYRYLLGQMQATPGHPRTTKAEFEETCRRRFRVSLGSFEYCWREAIKASGARWDQPGRRPR*
Ga0181523_102142262	3300014165	Bog	VTKVLRSALAIWRRLRLILFRGAYMPTKKPSIPLPTVSSETGTPELGTPDLTEFRTFTRPFPKDAGERDCYQFLLEQMEASHDHPPRTKTEFEKACRRRFRVNVESFEYCWREAIKITGACWDRPGRRPSKEFSR*
Ga0181526_103988922	3300014200	Bog	MPAKKPSISLSKAGLKTAAPELDAPDLTEFRTLIRPFPKDAGERACYQYLVEQMQATPDRPRETKAEFEKTCRWRFNVTVDSFDYCWRESIK
Ga0182024_121104452	3300014501	Permafrost	MPTTKPSISAVSLEPGGPELGAPDLTEFRIDIRPFPKDPAERDCYRYLLAQMQATPDRPRVTKAKFEKTCRRRFHVTLGSFEYCWREAIKASGARWDQPGRRPAKNFLA*
Ga0182030_100771634	3300014838	Bog	MTSKKPSVPLSAVSLEIGAPELGAPDLTEFRTLIRPFPKDAGERDCYQYLLEQMQATPDRPRRTKAEFEKACRRRFHVRVDSFDYCWREAIKVTGARWDRPGRRPN*
Ga0132258_119035632	3300015371	Arabidopsis Rhizosphere	MVTRHLSAESFATGAPSFDAADLTERRRVERPFLKDTGERDCYRYLLEQMEHSPDHPPALKGEFEGECRRRFQVTVNSFEYCWREAIKVSGAFWDQPGRRSR*
Ga0132257_1043856641	3300015373	Arabidopsis Rhizosphere	AVSLEPSASEACRPDLTEFRIVVRPFPKTTQERKCYQYLLAQMQAMPNCPQHTKAEFEKTCRARFRVTVDSFNYCWREAIKVSGADWDQPGRRSR*
Ga0132255_1015317721	3300015374	Arabidopsis Rhizosphere	MPTAQPSISLFPLGLKTGAPELGAPDFTENRVVRRPFPKNARERDCYRYLQEQMQATADLPHRTKEELEKTCREASHVTVDSFNYCWREAIKVTGARWDQPGRPPGKKFSR*
Ga0182038_102826272	3300016445	Soil	GAPELGTPDFTEIRNVPRPFPKDAAERACYQYLLEQMQAAPDGPHQRKDELEEICRRRFQVTVDSFDYCWREANKVTGADWDQPGRPSRQKLSR
Ga0066669_104197021	3300018482	Grasslands Soil	VFRRLLACMPATKSSISLSAVSFETAPPEFATPDLTEIRLIQRPFPKDPGERACYRYLLEQMRTAPDGPPQRKAEYEAFCRKRFRVTVESFDYCWREAIKVSGARWDQPGRPSHEKFSRKFTQVLFLRH
Ga0210397_114674881	3300021403	Soil	MPTTKPSISLSAVSLETGGPEFGAPEPTELRTVIRPFPKDAGERDCYRYLLEQMQAAPGRPRVRKAELKKTCRRQFHVTVDSFAYCWREAIKASGAPWDQ
Ga0210387_118838142	3300021405	Soil	MPRTKPSISPSAVSLETGGPELGAPDLTELRTEIRPFPKDARERDCYRYLLEQMQATPDRPRLTKAKFEKICRRRFHVTVGSFEYCWREGIKASGVHWDQPGRRPR
Ga0210402_105257032	3300021478	Soil	MPATKPSIGISAVSLETGAPKLDTPDPTERRSLIRPFPKDAGERGCYQYLLAQMQASPDHSRGTKAEFEKTCRRRYHVTVDSFDYSWREAIKVSGARWDQPGRRPG
Ga0212123_103568402	3300022557	Iron-Sulfur Acid Spring	MPRKPAIFVPAVSLETHAPGLGAPDLTENRIVRRPFPKDAGERDCYRYLLEQMQASPDHPRGTKPEFKRTCRRQYHVTVDSFEYCWREAVKVTGARWDQPGRRPR
Ga0208079_10079361	3300025481	Arctic Peat Soil	MPAKKPSITLSTAGLETAAPAVSTPDLTEHRTLIRRFPKDAGERDCYQYLLDQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKVTGARWDKPGRRPR
Ga0208079_10824022	3300025481	Arctic Peat Soil	KKPSITLSAVSLVTGAPVIGTPDLTELRTLIRPFPKDPGERGCYQYLLEQMHSTSDRPRRTKAEFEKTCRRRFHVTVDSFNYCWREAIKVTGTRWDQPGRRPS
Ga0208715_10523732	3300025482	Arctic Peat Soil	MTSKKPSIPLSAVSLETGTPEFGPSDLTEFRTLTRPFPKDAGERDCYQYLLEQMRATPDRPPGPKGDLENSCRQQFCVTVPSFQYCWREAIELTGACWDQPGRRPR
Ga0208587_10387532	3300025484	Arctic Peat Soil	MPAKKPSISISAAGLETAAPAVSTPDLTEHRPFIRRFPKDAGERDCYQYLLDQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKVTGARWDKPGRRPR
Ga0208080_10326692	3300025553	Arctic Peat Soil	LRLTMFRRLIACMPAKKPSITLSTAGLETAAPAVGAPDLTEHRTRIRRFPKDAGERECYQYLLEQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKVTGARWDKPGRRPR
Ga0207927_10888941	3300025579	Arctic Peat Soil	MPAKKPSISLATAGLETAAPAVSTPDLTEHRPFIRPFPKDAGERDCYQYLLEQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKVTGARWDKPGRRPR
Ga0208355_10383672	3300025581	Arctic Peat Soil	MPAKKPSITLSAVSLVTGAPVIGTPDLTELRTLIRPFPKDPGERGCYQYLLEQMHSTSDRPRRTKAEFEKTCRRRFHVTVDSFNYCWREAIKVTGTRWDQPGRRPS
Ga0207926_10489972	3300025619	Arctic Peat Soil	MPAKKPSISISAAGLETAAPAVSTPDLTEHRTLIRRFPKDAGERDCYQYLLDQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKVTGARWDKPGRRPR
Ga0209638_10319543	3300025725	Arctic Peat Soil	MTSKKPSIPLSAVSLETGTPEFGPSDLTEFRTRIRPFPKDVGERDCYQYLLEQMRATPDRPPGPKVDFENSCRRQFRVNVESFEYCWREAIKITGACWDRPGRRPSKEFSR
Ga0209484_100978311	3300025829	Arctic Peat Soil	MTSKKPSIPLSAVSLETGTPEFGPSDLTEFRTRIRPFPKDEGERDCYQYLLEQMRATPDRPPGPKVDFENSCRRQFRVNVESFEYCWREAIKITGACW
Ga0209124_100387742	3300025852	Arctic Peat Soil	MTSKKPSIPLSAVSLETGTPEFGPSDLTEFRTLTRPFPKDAGERDCYQYLLEQMRATPDRPPGPKGDLENSCRQQFGVTVPSFQYCWREAIKVTGACWDQPGRRSK
Ga0209429_102820321	3300025864	Arctic Peat Soil	MTSKKPSIPLSAVSLETGTPEFGPSDLTEFRTLTRPFPKDAGERACYQYLLEQMRATPDRPPGPKGDLENSCRQQFGVTVPSFQYCWREAIKVTGACWDQPGRRSK
Ga0209584_101159771	3300025878	Arctic Peat Soil	MTSKKPSIPLSAVSLETGTPEFGPSDLTEFRTRIRPFPKDVGERDCYQYLLEQMQATPDRPPGRKVEFANNCRRRFHVNVDSFEYCWREAIKVTGARWDQPGRRPSE
Ga0207678_115761881	3300026067	Corn Rhizosphere	RRLLACMPAMKPSISLFAVCLETGVPELGTPDPTEIRTLRRPFPKDAGERGCYRYLLEQMQATPDRARGTKAELEKMCRRQFHVAVESFEYCWREAIKVTGARWDRPGRRPR
Ga0209880_10499131	3300026271	Soil	MPAKKPSISLATAGLETAAPAVSTPDLTEHRPFIRRFPKDAGERDCYQYLLDQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKVTGARWDKPGRRPR
Ga0209913_11068092	3300026272	Soil	VAFHCVQSLLACMPAKKPSISISAAGLETAAPAVSRPDLTEHRTLIRRFPKDAGERDCYQYLLDQMQATPDRPRRTKAEFEKACRRRFHVKVDSFDYCWREAIKVTGARWDKPGRRPR
Ga0209038_101523991	3300027737	Bog Forest Soil	MTTTKPSISPSAVSLETGKPKLGAPDLTEFRTVIRRFPKDAAERNCYRYLLKQMQAAPGPPRATKAEFEDICQRRFHVTHVTHASFEYCWREAIEA
Ga0209773_102002961	3300027829	Bog Forest Soil	FRHLLACMTTTKPSISPSAVSLETGKPKLGAPDLTEFRTVIRRFPKDAAERNCYRYLLKQMQAAPGPPRATKAEFEDICQRRFHVTHVTHASFEYCWREAIEASGARWGHPGRRPR
Ga0209526_100750103	3300028047	Forest Soil	VSYPTAGVRRLRPAVFRRLLASMPARKPSISLSAIIGEKGPQPEFGTADFSELRNVPRLFPAGAGERECFQYLLEQMQATPDRPRGTKAEFKETCRRRFHVTVESFEYCWREANKVTGARWHQPGRRPR
Ga0307322_102204611	3300028710	Soil	MHANDETVHRLTGVNLEVGPPEFGKPDLTELRTLTRPFPKDVGERGCYRYLLEQMQATPDRPRGTKAELEERCRRLFHVTVESFDFCWREAIKVTGARWDRPGRRPR
Ga0307287_102365871	3300028796	Soil	MHANNETVHRLTGVNLEVGPPEFGKPDLTELRTLTRPFPKDVGERGCYRYLLEQMQATPDRPRGTKAELEERCRRLFHVTVESFDFCWREAIKVTGARWDRPGRRPR
Ga0307503_109302931	3300028802	Soil	MPATKPSISLSALSLETGPPEFGRPDLTEIRTVLRAFPGDVGERDCYRYLSDEMRATPDRRPRRKSEFEKICRDRFRVTVDSFEYCWREAIKVSGARWDQPGRPPR
Ga0307289_100180674	3300028875	Soil	MHANDETVHRLTGVNLEVGPPEFGKPDLTELRTLTRPFPKDVGERGCYRYLLEQMQATPDRPRGTKAELEETCRRLFHVTVESFDFCWREAIKVTGARWDQPGRRPR
Ga0307286_101497532	3300028876	Soil	MHANDETVHRLTGVNLEVGPPEFGKPDLTELRTLTRPFPKDVGERGCYRYLLEQMQATPDRPRGTKAELEETCRRLFHVTVESFDFCWREAIKVTGARWDRPGRRPR
Ga0307308_103322261	3300028884	Soil	HRLTGVNLEVGPPEFGKPDLTELRTLTRPFPKDVGERGCYRYLLEQMQATPDRPRGTKAELEERCRRLFHVTVESFDFCWREAIKVTGARWDRRGRRPR
Ga0318541_103710231	3300031545	Soil	MPAKKPPNSPSPRSLETGAPELGTPDFTEIRNVPRPFPKDAAERACYQYLLEQMQAAPDGPHQRKDELEEICRRRFQVTVDSFDYCWREANKVTGADWDQPGRPSRQKLSR
Ga0310915_102748072	3300031573	Soil	LETGAPELGTPDFTEIRNVPRPFPKDAAERACYQYLLEQMQAAPDGPHQRKDELEEICRRRFQVTVDSFDYCWREANKVTGADWDQPGRPSRQKLSR
Ga0318501_107319531	3300031736	Soil	MPAKKPPNSPSPRSLETGAPELGTPDFTEIRNVPRPFPKDAAERACYQYLLEQMQAAPDGPHQRKDELEEICRRRFQVTVDSFDYCWREA
Ga0306921_108005441	3300031912	Soil	LACMPAKKPPISPSPRSLETGAPELGTPDFTEIRNVPRPFPKDAAERACYQYLLEQMQAAPDGPHQRKDELEEICRRRFQVTVDSFDYCWREANKVTGADWDQPGRPSRQKLSR
Ga0306921_109864991	3300031912	Soil	ETSQPECGTPDLTELRTVVRRFPKNAAERDCYRYLLEQMQATPDRPSSTKTQLERTCRQRFRVTVESFDYCWREGIKVTRARWDQPGRPRG
Ga0310916_117116892	3300031942	Soil	VLRRLLACMPAKKPPNSPSPRSLETGAPELGTPDFTEIRNVPRPFPKDAAERACYQYLLEQMQAAPDGPHQRKDELEEICRRRFQVTVDSFDYCWREANKVTGADWDQPGRPSRQKLSR
Ga0306926_121092452	3300031954	Soil	ACMPAKKPPNSPSPRSLETGAPELGTPDFTEIRNVPRPFPKDAAERACYQYLLEQMQAAPDGPHQRKDELEEICRRRFQVTVDSFDYCWREANKVTGADWDQPGRPSRQKLSR
Ga0306924_100146681	3300032076	Soil	STSLFATSLETSQPECGTPDLTELRTVVRRFPKNAAERDCYRYLLEQMQATPDRPSSTKTQLERTCRQRFRVTVESFDYCWREGIKVTRARWDQPGRPRG
Ga0311301_100825743	3300032160	Peatlands Soil	MPATKPSIGLSAVSLETGAPKLDTPDPTERRSLIRPFPKDAGERGCYQYLLAQMQASPDHSRGTKAEFEKTCRRRYHVTVDSFDYCWREAIKVTGARWDQPGRRPG
Ga0307470_118081531	3300032174	Hardwood Forest Soil	SLEVGPPEFGKPDLTELRILIRPFPKDAGERGCYRYLLEQMQATPDRPRGTKAEFKQFCRRRFRVTVDSFEYCWREAILASGAHWDQPGRRPR
Ga0335081_116421632	3300032892	Soil	MRTTKPSISLSAVSLQTGGPEFGAPEPTELRTIIRPFPKDAAERDCYRYLLQQMQATPDRPRTMKAEFEETCRRRFHVTRASFEYCWREAIKASAARWDQPGRRPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070686

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences