Metagenome Family F070690

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070690
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	58 residues
Representative Sequence	MTTIRTGTGLTRYDVRRLKRGRYEILAIETRRLDQGDLTEIIWERDDGPDAITEAELPF
Number of Associated Samples	90
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.11 %
% of genes near scaffold ends (potentially truncated)	24.39 %
% of genes from short scaffolds (< 2000 bps)	81.30 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.472 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (30.081 % of family members)
Environment Ontology (ENVO)	Unclassified (31.707 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.837 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.79% β-sheet: 28.74% Coil/Unstructured: 57.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF05284	DUF736	9.76
PF01656	CbiA	4.88
PF10686	YAcAr	2.44
PF01336	tRNA_anti-codon	1.63
PF13614	AAA_31	1.63
PF01402	RHH_1	1.63
PF07015	VirC1	1.63
PF05406	WGR	0.81
PF11800	RP-C_C	0.81
PF00216	Bac_DNA_binding	0.81
PF02195	ParBc	0.81
PF00999	Na_H_Exchanger	0.81
PF13495	Phage_int_SAM_4	0.81
PF08808	RES	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG5489	Uncharacterized conserved protein, DUF736 family	Function unknown [S]	9.76
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	1.63
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.81
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.81
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.81
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.81
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.81
COG3831	WGR domain, predicted DNA-binding domain in MolR	Transcription [K]	0.81
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.81
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.47 %
All Organisms	root	All Organisms	45.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.47 %
cellular organisms	root	All Organisms → cellular organisms	45.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.47 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.47 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	22.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.47 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	21.95 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.47 %
unclassified Acetobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae	1.63 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples	1.63 %
Paracraurococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus	0.81 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.47 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	1.63 %
Acetobacteraceae bacterium SCN 69-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium SCN 69-10	1.63 %
unclassified Paracraurococcus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus → unclassified Paracraurococcus	0.81 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.81 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.47 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	1.63 %
Acetobacteraceae bacterium SCN 69-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium SCN 69-10	1.63 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.81 %
Paracraurococcus sp. NE82	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus → unclassified Paracraurococcus → Paracraurococcus sp. NE82	0.81 %
Mesorhizobium sp. STM 4661	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig325653	Not Available	602	Open in IMG/M
3300001380\|JGI1356J14229_10076103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1450	Open in IMG/M
3300001605\|Draft_10001075	All Organisms → cellular organisms → Bacteria	37094	Open in IMG/M
3300003219\|JGI26341J46601_10097471	Not Available	861	Open in IMG/M
3300003368\|JGI26340J50214_10099344	Not Available	748	Open in IMG/M
3300004091\|Ga0062387_101401817	Not Available	556	Open in IMG/M
3300004152\|Ga0062386_101037966	Not Available	680	Open in IMG/M
3300009500\|Ga0116229_10456983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1060	Open in IMG/M
3300009500\|Ga0116229_11022916	Not Available	664	Open in IMG/M
3300009510\|Ga0116230_10035946	All Organisms → cellular organisms → Bacteria → Proteobacteria	4675	Open in IMG/M
3300009510\|Ga0116230_10577914	Not Available	854	Open in IMG/M
3300009650\|Ga0105857_1016687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1956	Open in IMG/M
3300009651\|Ga0105859_1227560	Not Available	559	Open in IMG/M
3300009660\|Ga0105854_1158808	Not Available	733	Open in IMG/M
3300009701\|Ga0116228_10156350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1654	Open in IMG/M
3300009759\|Ga0116101_1147041	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300009760\|Ga0116131_1000260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	51826	Open in IMG/M
3300009787\|Ga0116226_10570905	Not Available	1136	Open in IMG/M
3300009787\|Ga0116226_11751388	Not Available	569	Open in IMG/M
3300009787\|Ga0116226_12155495	Not Available	501	Open in IMG/M
3300010339\|Ga0074046_10033473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3495	Open in IMG/M
3300010339\|Ga0074046_10107008	Not Available	1803	Open in IMG/M
3300010339\|Ga0074046_10392180	Not Available	839	Open in IMG/M
3300010341\|Ga0074045_10058598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2757	Open in IMG/M
3300010343\|Ga0074044_10215281	Not Available	1274	Open in IMG/M
3300011120\|Ga0150983_15113982	Not Available	552	Open in IMG/M
3300014159\|Ga0181530_10409173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	689	Open in IMG/M
3300014160\|Ga0181517_10136348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1391	Open in IMG/M
3300014161\|Ga0181529_10039734	All Organisms → cellular organisms → Bacteria → Proteobacteria	3451	Open in IMG/M
3300014168\|Ga0181534_10685993	Not Available	597	Open in IMG/M
3300014168\|Ga0181534_10887040	Not Available	532	Open in IMG/M
3300014499\|Ga0182012_10053896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3221	Open in IMG/M
3300014499\|Ga0182012_10091233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2313	Open in IMG/M
3300014499\|Ga0182012_10364051	Not Available	961	Open in IMG/M
3300014501\|Ga0182024_10375945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1846	Open in IMG/M
3300014502\|Ga0182021_11663480	Not Available	769	Open in IMG/M
3300014654\|Ga0181525_10292436	Not Available	890	Open in IMG/M
3300014658\|Ga0181519_10115469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1728	Open in IMG/M
3300014658\|Ga0181519_10413302	Not Available	833	Open in IMG/M
3300014658\|Ga0181519_10617468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	668	Open in IMG/M
3300014838\|Ga0182030_10238677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2099	Open in IMG/M
3300014839\|Ga0182027_10394417	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300015024\|Ga0167669_1000325	All Organisms → cellular organisms → Bacteria → Proteobacteria	41804	Open in IMG/M
3300015159\|Ga0167630_1042901	Not Available	834	Open in IMG/M
3300015208\|Ga0167664_1031106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1833	Open in IMG/M
3300017988\|Ga0181520_10614445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	753	Open in IMG/M
3300018035\|Ga0187875_10343290	Not Available	803	Open in IMG/M
3300018037\|Ga0187883_10435678	Not Available	673	Open in IMG/M
3300018038\|Ga0187855_10872599	Not Available	525	Open in IMG/M
3300018920\|Ga0190273_12087775	Not Available	528	Open in IMG/M
3300019767\|Ga0190267_11493802	Not Available	520	Open in IMG/M
3300022653\|Ga0236337_1162719	Not Available	828	Open in IMG/M
3300022849\|Ga0224531_1028509	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300022872\|Ga0224526_1005525	Not Available	3451	Open in IMG/M
3300023311\|Ga0256681_10601139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1628	Open in IMG/M
3300027807\|Ga0209208_10155274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1363	Open in IMG/M
3300027812\|Ga0209656_10022875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3800	Open in IMG/M
3300027812\|Ga0209656_10059588	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300027819\|Ga0209514_10003934	All Organisms → cellular organisms → Bacteria → Proteobacteria	20598	Open in IMG/M
3300027824\|Ga0209040_10153205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1242	Open in IMG/M
3300027824\|Ga0209040_10437905	Not Available	598	Open in IMG/M
3300027895\|Ga0209624_11049403	Not Available	526	Open in IMG/M
3300028562\|Ga0302151_10087633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1098	Open in IMG/M
3300028574\|Ga0302153_10214977	Not Available	659	Open in IMG/M
3300028745\|Ga0302267_10466242	Not Available	514	Open in IMG/M
3300028748\|Ga0302156_10080320	Not Available	1690	Open in IMG/M
3300028762\|Ga0302202_10024220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4543	Open in IMG/M
3300028762\|Ga0302202_10075489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium SCN 69-10	2026	Open in IMG/M
3300028762\|Ga0302202_10257829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	859	Open in IMG/M
3300028785\|Ga0302201_10308401	Not Available	629	Open in IMG/M
3300028813\|Ga0302157_10455965	Not Available	674	Open in IMG/M
3300028813\|Ga0302157_10655183	Not Available	537	Open in IMG/M
3300028873\|Ga0302197_10287730	Not Available	744	Open in IMG/M
3300028882\|Ga0302154_10122198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1382	Open in IMG/M
3300029907\|Ga0311329_10447265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	891	Open in IMG/M
3300029911\|Ga0311361_10303028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium SCN 69-10	1793	Open in IMG/M
3300029911\|Ga0311361_10550153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1124	Open in IMG/M
3300029911\|Ga0311361_10722905	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300029911\|Ga0311361_10792408	Not Available	842	Open in IMG/M
3300029913\|Ga0311362_10193176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2352	Open in IMG/M
3300029919\|Ga0302141_1051523	Not Available	1117	Open in IMG/M
3300029920\|Ga0302142_1186691	Not Available	632	Open in IMG/M
3300029922\|Ga0311363_11611555	Not Available	512	Open in IMG/M
3300029943\|Ga0311340_11506220	Not Available	526	Open in IMG/M
3300029944\|Ga0311352_10200531	All Organisms → cellular organisms → Bacteria → Proteobacteria	1701	Open in IMG/M
3300029952\|Ga0311346_10922371	Not Available	716	Open in IMG/M
3300029954\|Ga0311331_11692900	Not Available	508	Open in IMG/M
3300029955\|Ga0311342_10970834	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300029999\|Ga0311339_10220723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2118	Open in IMG/M
3300030007\|Ga0311338_10273452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus → unclassified Paracraurococcus → Paracraurococcus sp. NE82	1884	Open in IMG/M
3300030007\|Ga0311338_10410429	All Organisms → cellular organisms → Bacteria → Proteobacteria	1450	Open in IMG/M
3300030011\|Ga0302270_10067271	Not Available	2389	Open in IMG/M
3300030020\|Ga0311344_10375472	Not Available	1320	Open in IMG/M
3300030020\|Ga0311344_11140448	Not Available	594	Open in IMG/M
3300030041\|Ga0302274_10295123	Not Available	756	Open in IMG/M
3300030225\|Ga0302196_10052372	All Organisms → cellular organisms → Bacteria → Proteobacteria	2665	Open in IMG/M
3300030503\|Ga0311370_10670177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	1225	Open in IMG/M
3300030520\|Ga0311372_10880494	Not Available	1207	Open in IMG/M
3300030520\|Ga0311372_13056921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	504	Open in IMG/M
3300030524\|Ga0311357_11596202	Not Available	549	Open in IMG/M
3300030580\|Ga0311355_10504616	Not Available	1160	Open in IMG/M
3300031234\|Ga0302325_12976276	Not Available	549	Open in IMG/M
3300031234\|Ga0302325_13410032	Not Available	501	Open in IMG/M
3300031249\|Ga0265339_10397483	Not Available	644	Open in IMG/M
3300031258\|Ga0302318_10668035	Not Available	524	Open in IMG/M
3300031524\|Ga0302320_10033235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9728	Open in IMG/M
3300031524\|Ga0302320_10237417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2531	Open in IMG/M
3300031524\|Ga0302320_10358446	All Organisms → cellular organisms → Bacteria → Proteobacteria	1875	Open in IMG/M
3300031524\|Ga0302320_11368974	Not Available	708	Open in IMG/M
3300031524\|Ga0302320_11759313	Not Available	594	Open in IMG/M
3300031525\|Ga0302326_11386704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	951	Open in IMG/M
3300031525\|Ga0302326_12216192	Not Available	701	Open in IMG/M
3300031525\|Ga0302326_13164219	Not Available	557	Open in IMG/M
3300031708\|Ga0310686_104122818	Not Available	775	Open in IMG/M
3300031711\|Ga0265314_10693773	Not Available	515	Open in IMG/M
3300031788\|Ga0302319_10787989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	944	Open in IMG/M
3300031788\|Ga0302319_11739571	Not Available	542	Open in IMG/M
3300031788\|Ga0302319_11756638	Not Available	538	Open in IMG/M
3300031813\|Ga0316217_10203743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	812	Open in IMG/M
3300033405\|Ga0326727_10656122	Not Available	854	Open in IMG/M
3300033405\|Ga0326727_10774827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	746	Open in IMG/M
3300034130\|Ga0370494_000729	All Organisms → cellular organisms → Bacteria → Proteobacteria	8171	Open in IMG/M
3300034130\|Ga0370494_042834	Not Available	1151	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.24%
Host-Associated	Host-Associated	8.94%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.48%
Aquatic	Environmental → Aquatic	22.76%
Plants	Host-Associated → Plants	8.94%
Wastewater	Engineered → Wastewater	0.81%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	46.34%
Freshwater	Environmental → Aquatic → Freshwater	22.76%
Soil	Environmental → Terrestrial → Soil	21.14%
Peat Moss	Host-Associated → Plants → Peat Moss	7.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.63%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	46.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.82%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	7.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.69%
Lake	Environmental → Aquatic → Freshwater → Lake	1.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.63%
Loam	Environmental → Terrestrial → Soil → Loam	1.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.63%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.81%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	46.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.07%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.13%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	7.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.88%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.63%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.63%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	30.08%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.13%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	7.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.50%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.06%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.44%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.44%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.63%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.63%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.63%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.63%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.63%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.81%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.81%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300001605	Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin	Engineered	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015024	Arctic sediment microbial communities from supraglacial cryoconite, Rabots glacier, Tarfala, Sweden (Sample Rb cryoconite)	Environmental	Open in IMG/M
3300015159	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3C, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015208	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Samples st-15,16,16 pooled, 1st-3rd transect points, snow/rock/ice interface)	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022653	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W1	Environmental	Open in IMG/M
3300022849	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T100	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030225	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_04291920	2140918008	Soil	MTTIRTGTGLTRYDVRRLKRGRYEILAIETRRMDQGDLTEIIWERDDGPDAITEAELPF
JGI1356J14229_100761032	3300001380	Groundwater	MTIIRTGTGLTRYDIRRLKRGRYEILAIETRHPDQGEATDILWHREDGPDAITEAELPF*
Draft_1000107515	3300001605	Hydrocarbon Resource Environments	MTIIRTVTGLTRHDVRRLQRGRYEILAIETRFLDQGEVTEIVWHRDDGPDAIREAEMPF*
JGI26341J46601_100974713	3300003219	Bog Forest Soil	MTIIRTVAGLTRHDIHRIKRGRYEILAIETRHLERGDVTEIIWHREDGPDAIQECEVPF*
JGI26340J50214_100993442	3300003368	Bog Forest Soil	MTXIRTVAGLTRHDIRRIKRGRYEILAVETRHLDRGDVTEIIWHREGGPDAIQEHELPY*
Ga0062387_1014018171	3300004091	Bog Forest Soil	MTIIRTGVGLTRRDVRGLRRDRYEIRAIETRHLDQGDLTTIIWERDDGPDGITEAELPF*
Ga0062386_1010379662	3300004152	Bog Forest Soil	EHPIMTIIRTVAGLTRHDIHRIKRGRYEILAIETRHLERGDVTEIIWHREDGPDAIQECEVPF*
Ga0116229_104569832	3300009500	Host-Associated	MTVLRTGTGLTRRDIRRLKRGGYTIQAIETRRMADSRVTEIIWERDDGPDAITEADLPF*
Ga0116229_110229161	3300009500	Host-Associated	MTIIRTVAGLTRHDVRRIKRGRYEILAVETRHLEEGDVTEILWSREDGPDAIQEHELPF*
Ga0116230_100359461	3300009510	Host-Associated	MTVLRTGTGLTRRDIRRLKRGGYTIQAIETRRMADSSVTEIIWERDDGPDAITEADLPF*
Ga0116230_105779141	3300009510	Host-Associated	MTHIRTVAGLTRHDVRRILRARYEILAVETRHPEEGDVTEILWSRDDGPDAIQEHELPF*
Ga0105857_10166871	3300009650	Permafrost Soil	MMTIIRTVAGLTRHDVRLLRRARYEILAIETRHLDQSNVTDILWHREDKPDAITAAEIPF
Ga0105859_12275601	3300009651	Permafrost Soil	GWQPEEHRIMMTIIRTVAGLTRHDVRLLRRARYEILAIETRHLDQSNVTDILWHREDKPDAITAAEIPF*
Ga0105854_11588081	3300009660	Permafrost Soil	MMTIIRTVAGLTRHDVRLLRRARYEILAIETRHLDQSNVTDILWHQEDKPDAITAAEIPF
Ga0116228_101563501	3300009701	Host-Associated	MTVLRTGTDLTRRDIRRLKRGGYTIQAIETRRMADSSVTEIIWERDDGPDAITEADLPF*
Ga0116101_11470412	3300009759	Peatland	MTIIRTVSGLTRGDIRRLKRGRYEIVAIETRHLDQGEVTEIIWERDDGPDAIKERELPF*
Ga0116131_10002601	3300009760	Peatland	MTTIRTGTGLTRRDVRRLEQGRYEILAIETRRLDQGDLTEIIWERDDG
Ga0116226_105709051	3300009787	Host-Associated	MTIIRTVAGLTRHDVRRIKRGRYEILAIETRHLEEGDVIEILWSRDDGPDAIQEHELPY*
Ga0116226_117513881	3300009787	Host-Associated	MTVLRTGTDLTHRDIRSLKRGGYTIQAIETRRMADSSVTEIIWERDDGPDAITEADLPF*
Ga0116226_121554951	3300009787	Host-Associated	MTIIRTGTGLTRRAIRRLKRGGYSIHSIETRERADGPVTEIIWERDEGPDAIREADLPF*
Ga0074046_100334735	3300010339	Bog Forest Soil	MTIIRTVAGLTRHDIRRIKRGRYEILAIETRHSDRGDVTEIIWHREDGPDAIQEHEIPY*
Ga0074046_101070083	3300010339	Bog Forest Soil	MTIIRTVTGLTRHDIRRIKRGRYEILAVETRRLERGDVTEIIWHREDGPDAIQGCEVPF*
Ga0074046_103921802	3300010339	Bog Forest Soil	MTIIRTVAGLTRHDIRRIKRGRYEILAIETRHLERGDVIEIIWHREDGPDAITEAEVPF*
Ga0074045_100585983	3300010341	Bog Forest Soil	LTRHDIRRIKRGRYEILAIETRHSERGDVTEIIWHREDGPDAIQGCEVPF*
Ga0074044_102152811	3300010343	Bog Forest Soil	MTIIRTVAGLTRHDIRRIKRGRYEILAVETRHSDRGDVTEIIWHREDGPDAITENELPY*
Ga0150983_151139821	3300011120	Forest Soil	MTIIRTIADLTRNDVRRIKRGRYEILAIETRHLGQDEATEILWIRQDPPNAIREDELPF*
Ga0181530_104091732	3300014159	Bog	MTVIRTGAGLTRHDVRRLTRGRYEILAIETRHLDQGDLTTIIWERDDGPD
Ga0181517_101363482	3300014160	Bog	MTTIRTGTGLTRYDVRRLKRGRYEILAIETRRLDQGERTEIIWERDDGPDAITEAELPF*
Ga0181529_100397344	3300014161	Bog	MTILRTGTGLTRRDVRRLEQGRYEILAIETRHLDQGELTEIIWERDDGPDAITEAELPF*
Ga0181534_106859931	3300014168	Bog	MTIIRTGAGLNRRDVRSLERDRYEIRAIETRHLAEGDLTQILWERDDGPDGITEAELPF*
Ga0181534_108870401	3300014168	Bog	MGWQSTENRIMTIIRTTAGLTRGDIRRLKRGRYEIRAIETRHLDQGEVTEIIWERDDGPDAITEAELPF*
Ga0182012_100538964	3300014499	Bog	MTIIRTIAGLTRHDVRRIKRGRYEIMAAETRHLEEGDVTEILWSREDGPDAIQEHELPF*
Ga0182012_100912331	3300014499	Bog	MTIIRTIANLTRHDVRRIKRGRYKILAIETQHLEYGDATEILWSREDAPDAIREDELPF*
Ga0182012_103640511	3300014499	Bog	MTTIRTGTGLTRYDVRRLKRGRYEILAIETRRLDQGDLTEIIWERDDGPDAITEAELPF*
Ga0182024_103759453	3300014501	Permafrost	MTIIRTGTGLTRRDVRRLEQGRYEILAIETRCLDQGDLTEIIWERDDGPDAITEAELPF*
Ga0182021_116634802	3300014502	Fen	MTTIRTGTGLTRRDVRRLEQDRYKILAVETLHLDHGELTEIIRERDDGPDAITAAKLPF*
Ga0181525_102924362	3300014654	Bog	MTIIRTGAGLTHHDVRRLKRGRYEILAIETRHLGEGDQTTILWERDDGPDGITEAELPF*
Ga0181519_101154692	3300014658	Bog	MTTIRTGTGLTRRDVRRLELGRYEILAIETLHLDQGELTEIIWERDDGPDAITEAELPF*
Ga0181519_104133022	3300014658	Bog	MTILRTGAGLSSRDIRGLKRDRYEIQAIETWNLDEGDLTTIVWERDDGPDAITEAEIPY*
Ga0181519_106174681	3300014658	Bog	MTILRTGTGLTRRDVRRLEQGRYEILAIETLHLNHSDLTEIIWERDDGPDAITEAELPF*
Ga0182030_102386771	3300014838	Bog	VLTRPEGRRFHWSPAIGWRSEEHLTMTTIRTGTGLTRRDVRRLKRGRYEILAIETRRLDQGERTEIIWERDDGPDAITEAELPF*
Ga0182027_103944172	3300014839	Fen	MTILRTGTGLTRRDVRRLEQGRYEILAIETRHLDLGELTEIIWERDDGPDAITAAELPF*
Ga0167669_100032543	3300015024	Glacier Forefield Soil	VLTRPEGRRFHWSPAIGWRSEKHRIMTTIRTGTGLTRYDVRRLELGRYEILAIETLHLDQGELTEIIWERDDGPDAITEAELPF*
Ga0167630_10429012	3300015159	Glacier Forefield Soil	MMTIIRTNAALNRHDVRLLHRGRYEILAIETSHHGQNDVTEILWHRDETPDAITAAEIPF
Ga0167664_10311062	3300015208	Glacier Forefield Soil	MTTIRTGTGLTRYDVRRLELGRYEILAIETLHLDQGELTEIIWERDDGPDAITEAELPF*
Ga0181520_106144452	3300017988	Bog	MTILRSGTGLTRRNVRRLEQGRYEILAIETRHLDQGELTEIIWERDDGPDAITEAELPF
Ga0187875_103432901	3300018035	Peatland	MTILRTGTGLTRYDVRRLKWGRYEILAIETRHLDQGDLTEIIWERDDGPDAITEAELPF
Ga0187883_104356781	3300018037	Peatland	MTTIRTGTGLTRYDVRRLKRGRYEILAIETLHLDQGELTEIIWERDDGPDAITEAELPF
Ga0187855_108725991	3300018038	Peatland	MTTIRTGTGLTRRDVRRLELGRYEILAIETLHLDQGELTEIIWERDDGPDAITEAELPF
Ga0190273_120877751	3300018920	Soil	MTIIRTATDLTRHDIRRLRRGRFEILAIETRHLDRGDVAEILWCRDDEPGAITEA
Ga0190267_114938021	3300019767	Soil	MTIIRTAADLTGHDIRRLRRGRFEILAIETRHLDRGDVAEILWCRDDEPGAITEAEIPF
Ga0236337_11627191	3300022653	Freshwater	MTILRTGAGLSRRDIRSLKRDRYEIQAIETWNLDEGDLTTIIWERDDGPDAITEAEIPY
Ga0224531_10285092	3300022849	Soil	MTTIRTGTGLTPRDVRRLERGRYEILAIETWHLDDGDVTDIIWGRDDGPDAITEAELPF
Ga0224526_10055256	3300022872	Soil	MTILRTGAGLSSRDIRGLKRDRYEIQAIETWNLDEGDLTTIIWERDDGPDAIQDWEVPF
Ga0256681_106011392	3300023311	Freshwater	MTILRTGAGLSSRDIRGLKRDRYEIQAIETWNLDEGDLTTIIWERDDGPDAITEADLPY
Ga0209208_101552741	3300027807	Host-Associated	MTVLRTGTDLTRRDIRRLKRGGYTIQAIETRRMADSSVTEIIWERDDG
Ga0209656_100228752	3300027812	Bog Forest Soil	MTIIRTVAGLTRHDIRRIKRGRYEILAVETRHLDRGDVTEIIWHREDGPDAIQEHELPH
Ga0209656_100595885	3300027812	Bog Forest Soil	MTIIRTVAGLTRHDIHRIKRGRYEILAIETRHLERGDVTEIIWHREDGPDAIQECEVPF
Ga0209514_1000393421	3300027819	Groundwater	MTIIRTGTGLTRYDIRRLKRGRYEILAIETRHPDQGEATDILWHREDGPDAITEAELPF
Ga0209040_101532053	3300027824	Bog Forest Soil	MTIIRTVAGLTRHDIRRIKRGRYEILAIETRHLERGDVIEIIWHREDGPDAITEAEVPF
Ga0209040_104379051	3300027824	Bog Forest Soil	RHDIRRIKRGRYEILAIETRHSDRGDVTEIIWHREDGPDAIQEHEIPY
Ga0209624_110494031	3300027895	Forest Soil	MTIIRTIAGLTRGDIRRLKRRGYEILAIETWHLKQGDLTEVIWERDDDPDAIPLDELPF
Ga0302151_100876332	3300028562	Bog	MTTIRTGTGLTRYDVRRLKRGRYEILAIETRRLDQGDLTEIIWERDDGPDAITEAELPF
Ga0302153_102149771	3300028574	Bog	MTTIRTGTGLTRYDVRRLKRGRYEILAIETRRLDQGDLTEIIWERDDGPDAITEA
Ga0302267_104662421	3300028745	Bog	MTTIRTGTGLTRRDVRRLELGRYEILVIETLHLDQGELTEIIWERDDGPDAITEAELPF
Ga0302156_100803201	3300028748	Bog	MTTIRTGTGPTRYDVRRLKRGRYEILAIETRRLDQGERTEIIWERDDGPDAITEAELPF
Ga0302202_100242203	3300028762	Bog	MTIIRTIAGLTRHDVRRIKRGRYEIMAAETRHLEEGDVTEILWSREDGPDAIQEHELPF
Ga0302202_100754892	3300028762	Bog	MTTIRTGTGLTRRDVRRLELGRYEILAIESLHLDQGELTEIIWERDDGPDAITEAELPF
Ga0302202_102578292	3300028762	Bog	MTTIRTGNGLTRHDVRRLEQARYGILAIETRHLDHGELTEIVWERDDGPDAITEADLPF
Ga0302201_103084012	3300028785	Bog	MTILRTGAGLSSRDIRGLKRDRYEIQAIETWNLDEGDLTTIIWERD
Ga0302157_104559651	3300028813	Bog	MTIIRTVAGLTRHDVRRIKRARYEILAIETRRLDRGDLTEILWHREERRDAIRDDEVPY
Ga0302157_106551831	3300028813	Bog	MTIIRTVAGLTRHDVRRIKRGRYEILAVETRHLEEGDVTEILWSREDGPDAIQEHELPF
Ga0302197_102877301	3300028873	Bog	MTTIRTGTGLTRYDVRRLKRGRYEILAIETRCLDQGDLTEIIWERDDGPDAITEAELPF
Ga0302154_101221982	3300028882	Bog	MTTVRTGTGLTRRDVRRLELGRYEILAIESLHLDQGELTEIIWERDDGPDAITEAELPF
Ga0311329_104472652	3300029907	Bog	MTTIRTGTGLTRRDVRRLELGRYEILAIESLHLDQGELTEIIWERDDGPDAIT
Ga0311361_103030281	3300029911	Bog	RRDVRRLELGRYEILAIESLHLDQGELTEIIWERDDGPDAITEAELPF
Ga0311361_105501531	3300029911	Bog	PIMTVIRTVAALTRGDFRRLKRGRYEILAIETSHLDRGERTEIIWGRDDGPDAITAAELP
Ga0311361_107229052	3300029911	Bog	MTVIRTGAGLTRHDIRRLTRGRYEILAIETWHLDEGNETTILWERDDGPNAITEAELPF
Ga0311361_107924081	3300029911	Bog	MTIIRTVAGLTRHDVRRIKRGRYEILAVETRHLEEGDVTEILWSREDEPDAIQEHELPF
Ga0311362_101931761	3300029913	Bog	RTGTGLTRYDVRRLKRGRYEILAIETRRLDQGDLTEIIWERDDGPDAITEA
Ga0302141_10515231	3300029919	Bog	EENSIMTILRTGAGLSSRDIRGLKRDRYEIQAIETWNLDEGDLTTIIWERDDGPDAIQDWEVPF
Ga0302142_11866911	3300029920	Bog	MTTIRTGTGLTRRDVRRLEQGRYEILAIETRRLDQGDLTEIIWERDDGPDAITEA
Ga0311363_116115551	3300029922	Fen	MMTIIRTIAGLTRHDVRRIKRGRYEILAVETRHLEEGDVTEILWSREDEPDAIQEHELPF
Ga0311340_115062201	3300029943	Palsa	MTIIRTVAGLTRHDIRLIKRGRYEILAIETRHERQGDVTEILWSRDDGPDAITED
Ga0311352_102005311	3300029944	Palsa	LTIIRTVAGLTRHDIRLIKRGRYEILAIETRHETQGDVTEILWNREDRPDAIQGYELPF
Ga0311346_109223711	3300029952	Bog	MTIIRTVAGLTRHDVRRIKRGRYEILAVETRHLEEGDVTEILWSREDGPDAIHEHELPY
Ga0311331_116929001	3300029954	Bog	MTLIRTGGGLTPRDIRRLTRAGYDIRAIETRHSEQGEVTEIIWEREDGPDAITAAEVPY
Ga0311342_109708342	3300029955	Bog	TENRIMTIIRTTAGLTRGDIRRLKRGRYEIRAIETRHMDQGEMTEIIWERDDGPDAITEADLPF
Ga0311339_102207232	3300029999	Palsa	MTIIRTVAGLTRHDIRLIKRGRYEILAIETRHERQGDVTEILWSRDDGPDAITEDELPF
Ga0311338_102734523	3300030007	Palsa	LAGSTEEHRTLTIIRTVAGLTRHDIRLIKRGRYEILAIETRHERQGDVTEILWSRDDGPDAITEDELPF
Ga0311338_104104291	3300030007	Palsa	EEHRTLTIIRTVAGLTRHDIRLIKRGRYEILAIETRHETQGDVTEILWNREDRPDAIQGYELPF
Ga0302270_100672714	3300030011	Bog	LRTGAGLSSRDIRGLKRDRYEIQAIETWNLDEGDLTTIIWERDDGPDAIQDWEVPF
Ga0311344_103754721	3300030020	Bog	SIMTILRTGAGLSSRDIRGLKRDRYEIQAIETWNLDEGDLTTIIWERDDGPDAIQDWEVP
Ga0311344_111404481	3300030020	Bog	MTTIRTGTGLTRRDVRRLEQGHYEILAIETRRLDQGDLTEIIWERDDGPDAITE
Ga0302274_102951231	3300030041	Bog	MTTIRTGTGLTRYDVRRLKRGRYEILAIETRRLDQGERTEIIWERDDGPDAITEAELPF
Ga0302196_100523721	3300030225	Bog	MTIIRTIAGLTRHDVRRIKRGRYEIMAAETRHLEEGDVTEILWS
Ga0311370_106701771	3300030503	Palsa	LTIIRTVAGLTRHDIRLIKRGRYEILAIETRHETQGEVTEILWSREDGPDAIQEYELQF
Ga0311372_108804941	3300030520	Palsa	MTTIRTGTGLTRRDVRRLEQGRYEILAIETRRLDQGDLTEIIWERDDGPDAITEAELPF
Ga0311372_130569211	3300030520	Palsa	MTIIRTVAGLSRHDIRRIKRGRYEILAIETRHQDQGDVTEILWNREDQFDAIQEHELPF
Ga0311357_115962021	3300030524	Palsa	LAGSTEEHRTLTIIRTVAGLTRHDIRLIKRGRYEILAIETRHETQGDVTEILWNREDRPDAIQGYELPF
Ga0311355_105046162	3300030580	Palsa	MTIIRTVAGLTRHDIRLIKRGRYEILAIETRHETQGDVTEILWSRDDGPDAITEDELPF
Ga0302325_129762761	3300031234	Palsa	VTIIRTVAGLTRGDIRRLKRGRYEIVAIETRHLEQGEVTEIIWERDDGPDAITAAE
Ga0302325_134100321	3300031234	Palsa	MTIIRTVAGLTRHDIRLIKRGRYEILAIETRHETQGEVTEILWSREDGPDAIQEYELQF
Ga0265339_103974831	3300031249	Rhizosphere	MTVIRTGAGLTHHDVRRLKSGRYEILAIETRHLDQGDSTTIIWERDDGPDAITEAELPF
Ga0302318_106680351	3300031258	Bog	MTIIRTIAGLTRHDVRRIKRGRYEIMAAETRHLEEGDLIEILWSREDGPDAIQEHELPF
Ga0302320_1003323513	3300031524	Bog	RTGTGLTRRDVRRLELGRYEILAIESLHLDQGELTEIIWERDDGPDAITEAELPF
Ga0302320_102374171	3300031524	Bog	MMTIIRTIAGLTRHDVRRIKRGRYEILAVETRHLEEGDVTEILWSREDGPDAIQQHELPF
Ga0302320_103584463	3300031524	Bog	TGLTRYDVRRLKRGRYEILAIETRRLDQGDLTEIIWERDDGPDAITEAELPF
Ga0302320_113689742	3300031524	Bog	MTIIRTVAGLTRHDLRRIKRARYEILAIETRRLDRGDLTEILWHREERRDAIRDDEVPY
Ga0302320_117593131	3300031524	Bog	MTIIHTTAGLTRGDIRRLKRAAMRSARSKRGTPDQGEMTEIIWERDDGPDAITEADLPF
Ga0302326_113867042	3300031525	Palsa	MTIIRTVADLTRQDVRRLKRGRYEIRAIETRRLDQGEVTEILWERDDGPDAITAAELPF
Ga0302326_122161921	3300031525	Palsa	MTIIRTVAGLTRGDIRRLKRGHYEIVAIETRHLDQGDMAEIIWERDDGPDAIKEWEIPF
Ga0302326_131642191	3300031525	Palsa	MTIIRTGAGLTHHDVRRLKRGRYEILAIETRHLGEGDQTTIIWERDDGPDGITEAELPF
Ga0310686_1041228182	3300031708	Soil	MTIIRTVAGLTRGDVRRLKRGRYEIVAIETRHLDQGDLTEIIWERDDGPDAIKESELPF
Ga0265314_106937732	3300031711	Rhizosphere	IRTGAGLTHHDVRRLKSGRYEILAIETRHLDQGDSTTIIWERDDGPDAITEAELPF
Ga0302319_107879891	3300031788	Bog	MTILRTGAGLSSRDIRGLKRDRYEIQAIETWNLDEGDLTTIIWERDDGPDAIQ
Ga0302319_117395712	3300031788	Bog	TIADLTRHDVRRIKRARYEILAIETRHLGQGDATEILWSREDGPDAIQEHELPF
Ga0302319_117566381	3300031788	Bog	MTIIHTTAGLTRGDIRRLKRAAMRSARSKRGTPDQGEMTEIIWERDDGPDAITEAELPF
Ga0316217_102037431	3300031813	Freshwater	MTILRTGAGLSRRDIRGLKRDRYEIQAIETWNLDEGDLTTIIWERDDGPDAITEAEIPF
Ga0326727_106561222	3300033405	Peat Soil	MTILRTGAGLSRRDIRGLKRDRYEIQAIETWNLDEGDLTTIIWERDDGPDAIQDWEVPF
Ga0326727_107748272	3300033405	Peat Soil	MTILRTGAGLSSRDIRGLKRDRYEIQAIETWNLDEGDLTTIIWERDDGPDAIQDW
Ga0370494_000729_7227_7406	3300034130	Untreated Peat Soil	MTIIRTVAGLTRHDVRRIKRARYEILAIETRRLDRGDLTEILWHREEGPDAIRDDEVPY
Ga0370494_042834_409_591	3300034130	Untreated Peat Soil	MMTIIRTIAGLTRHDVRRIKRGRYEILAVETRHLEEGDATEILWSRDDGPDAIQEHELPY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070690

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences