Metagenome Family F070726

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070726
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	55 residues
Representative Sequence	VRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAK
Number of Associated Samples	29
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	4.10 %
% of genes from short scaffolds (< 2000 bps)	0.82 %
Associated GOLD sequencing projects	29
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (94.262 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens (72.131 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Fungus → Fungus corpus (72.131 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 20.00% Coil/Unstructured: 80.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00385	Chromo	1.64
PF00078	RVT_1	1.64
PF08284	RVP_2	1.64
PF00665	rve	0.82
PF03732	Retrotrans_gag	0.82
PF14821	Thr_synth_N	0.82
PF07727	RVT_2	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.82
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.82
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.82
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
All Organisms	root	All Organisms	5.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
cellular organisms	root	All Organisms → cellular organisms	4.92 %
Viruses	superkingdom	All Organisms → Viruses	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	4.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	4.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	4.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	4.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Agaricomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	4.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Agaricomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	4.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Agaricomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae	3.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Agaricales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	3.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Agaricaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae	1.64 %
Agaricineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricineae	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Agaricus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus	1.64 %
Agaricineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricineae	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Agaricus bisporus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus	1.64 %
Agaricineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricineae	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.26 %
Agaricus bisporus var. burnettii	varietas	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus → Agaricus bisporus var. burnettii	0.82 %
Agaricineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricineae	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300011394\|Ga0153970_1003956	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricineae	3195	Open in IMG/M
3300011394\|Ga0153970_1008882	All Organisms → cellular organisms → Eukaryota	1982	Open in IMG/M
3300012054\|Ga0154007_1001317	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	5365	Open in IMG/M
3300012054\|Ga0154007_1008203	Not Available	2126	Open in IMG/M
3300012057\|Ga0153995_1001875	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	5236	Open in IMG/M
3300012144\|Ga0153996_1010333	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus → Agaricus bisporus var. burnettii	2644	Open in IMG/M
3300012998\|Ga0157362_1008185	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus	5953	Open in IMG/M
3300012998\|Ga0157362_1057882	Not Available	2147	Open in IMG/M
3300013000\|Ga0157360_1010479	All Organisms → Viruses → Predicted Viral	3106	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Fungi	Host-Associated → Fungi	100.00%

Habitat	Taxonomy	Distribution
Mycelium	Host-Associated → Fungi → Mycelium	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	72.13%
Fungus Garden	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden	27.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300011394	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA054 MetaG	Host-Associated	Open in IMG/M
3300011396	Attine ant fungus gardens microbial communities from Florida, USA - TSFL044 MetaG	Host-Associated	Open in IMG/M
3300011401	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA068 MetaG	Host-Associated	Open in IMG/M
3300012054	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC091 MetaG	Host-Associated	Open in IMG/M
3300012057	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC079 MetaG	Host-Associated	Open in IMG/M
3300012059	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC075 MetaG	Host-Associated	Open in IMG/M
3300012069	Attine ant fungus gardens microbial communities from Florida, USA - TSFL049 MetaG	Host-Associated	Open in IMG/M
3300012070	Attine ant fungus gardens microbial communities from Florida, USA - TSFL047 MetaG	Host-Associated	Open in IMG/M
3300012071	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA067 MetaG	Host-Associated	Open in IMG/M
3300012073	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA063 MetaG	Host-Associated	Open in IMG/M
3300012076	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA055 MetaG	Host-Associated	Open in IMG/M
3300012078	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC083 MetaG	Host-Associated	Open in IMG/M
3300012083	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC084 MetaG	Host-Associated	Open in IMG/M
3300012119	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC072 MetaG	Host-Associated	Open in IMG/M
3300012123	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA052 MetaG	Host-Associated	Open in IMG/M
3300012126	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC081 MetaG	Host-Associated	Open in IMG/M
3300012130	Attine ant fungus gardens microbial communities from Florida, USA - TSFL048 MetaG	Host-Associated	Open in IMG/M
3300012131	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC078 MetaG	Host-Associated	Open in IMG/M
3300012135	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA066 MetaG	Host-Associated	Open in IMG/M
3300012136	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA069 MetaG	Host-Associated	Open in IMG/M
3300012139	Attine ant fungus gardens microbial communities from Florida, USA - TSFL045 MetaG	Host-Associated	Open in IMG/M
3300012141	Attine ant fungus gardens microbial communities from Florida, USA - TSFL042 MetaG	Host-Associated	Open in IMG/M
3300012144	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC080 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012995	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM2	Host-Associated	Open in IMG/M
3300012998	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM3	Host-Associated	Open in IMG/M
3300012999	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta sexdens ASBM1	Host-Associated	Open in IMG/M
3300013000	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM1	Host-Associated	Open in IMG/M
3300013002	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta sexdens ASBM2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0153970_10039561	3300011394	Attine Ant Fungus Gardens	EEWYRLIGVRIEQKEDVNDFNLQTKELGCNYWSTYTKSGIGKVQVTSLHRDPIGVNNRSLGVKN*
Ga0153970_10040141	3300011394	Attine Ant Fungus Gardens	GVRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153970_10075721	3300011394	Attine Ant Fungus Gardens	EDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0153970_10088822	3300011394	Attine Ant Fungus Gardens	LIGVRVGQGEDVNDFNLQAKELECNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGVKN*
Ga0153970_10114144	3300011394	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLQTKELGYNYWSTYTKSGIGGVQVTSLHCDPIGVDNRSLGVKN*
Ga0153970_10290133	3300011394	Attine Ant Fungus Gardens	LIGVRIGQEEDINDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDN
Ga0153970_10380301	3300011394	Attine Ant Fungus Gardens	VRIEQGEDVNDFNLQTKKLGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153960_10085901	3300011396	Attine Ant Fungus Gardens	EDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGVKN*
Ga0153960_10087291	3300011396	Attine Ant Fungus Gardens	LIGVRIEQGEDINDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153960_10193661	3300011396	Attine Ant Fungus Gardens	LIGVRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHCDPIGVDN
Ga0153960_10394101	3300011396	Attine Ant Fungus Gardens	VRIKQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIG
Ga0153960_10486682	3300011396	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIEVDNKSLGAKN*
Ga0153984_10387651	3300011401	Attine Ant Fungus Gardens	LGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0153984_10609631	3300011401	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKISNNIKY
Ga0153984_10881631	3300011401	Attine Ant Fungus Gardens	LIGVRIGQGKDINDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDN
Ga0153984_11141141	3300011401	Attine Ant Fungus Gardens	EQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVNNRSLGVKN*
Ga0154007_10013175	3300012054	Attine Ant Fungus Gardens	VRIEQKEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVNNRSLGVKN*
Ga0154007_10021732	3300012054	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDLIGVDNRSLGAK
Ga0154007_10039111	3300012054	Attine Ant Fungus Gardens	LIGVRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0154007_10069033	3300012054	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNR
Ga0154007_10082037	3300012054	Attine Ant Fungus Gardens	LIGVRIEQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDP
Ga0154007_10119721	3300012054	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLQTKELGYNYWSTYTKSGIGGVLVTSLYRDPIGVDNRSLGAKN*
Ga0154007_10139992	3300012054	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0154007_10203352	3300012054	Attine Ant Fungus Gardens	LIGRRIGQGDNVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVD
Ga0154007_10345821	3300012054	Attine Ant Fungus Gardens	LIEVRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIG
Ga0153995_10018751	3300012057	Attine Ant Fungus Gardens	EDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVNNRSLGVKN*
Ga0153995_10074752	3300012057	Attine Ant Fungus Gardens	MRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGSKN*
Ga0153995_10108791	3300012057	Attine Ant Fungus Gardens	VRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153995_10332562	3300012057	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLQTKELGYNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAK
Ga0153995_10409972	3300012057	Attine Ant Fungus Gardens	GVRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLGAKN*
Ga0153995_10426601	3300012057	Attine Ant Fungus Gardens	LIGVRIGQGKDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLG
Ga0153991_100196111	3300012059	Attine Ant Fungus Gardens	RIEQREDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153991_10021757	3300012059	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAK
Ga0153991_10095986	3300012059	Attine Ant Fungus Gardens	YRLIGVRIEQKEDVNDFNLQTKELGCNYWSTYTKSGIGKVQVTSLHRDPIGVNNRSLGVKN*
Ga0153991_10166033	3300012059	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLQTKELGYNYWSTYTKSGIGGVQVTSLHRDPIGVNNRSLGAKI
Ga0153991_10506622	3300012059	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVNNRSLGAKN*
Ga0153965_10046865	3300012069	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVD
Ga0153965_10186842	3300012069	Attine Ant Fungus Gardens	VRVGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDN
Ga0153965_10198301	3300012069	Attine Ant Fungus Gardens	NDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0153965_10216593	3300012069	Attine Ant Fungus Gardens	LIGVRIEQEEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153965_10229872	3300012069	Attine Ant Fungus Gardens	LIGVRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHHDPIGVDN
Ga0153965_10232491	3300012069	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHCDPIGVDNR
Ga0153965_10280561	3300012069	Attine Ant Fungus Gardens	LIGVRIEQGKDINDFNLRTKELGYNYWSTYTKSRIGGVQVTSLHRDSIGVNNRSLGVKN*
Ga0153965_10305393	3300012069	Attine Ant Fungus Gardens	LIGVRIGQGEDINDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAK
Ga0153965_10325101	3300012069	Attine Ant Fungus Gardens	LIGVRIDQGEDINDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDN
Ga0153965_10514873	3300012069	Attine Ant Fungus Gardens	LIGMRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDN
Ga0153963_100109711	3300012070	Attine Ant Fungus Gardens	EDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153983_10036341	3300012071	Attine Ant Fungus Gardens	VRIEQGEDINDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153983_10166201	3300012071	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLQTKELGYNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKISNN
Ga0153983_10264111	3300012071	Attine Ant Fungus Gardens	VRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIG
Ga0153983_10657471	3300012071	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLQTKELKCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGV
Ga0153983_10738331	3300012071	Attine Ant Fungus Gardens	LIGVRIGQEEDINDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGV
Ga0153979_10074473	3300012073	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIEVDNKSLGAKN*
Ga0153971_10095731	3300012076	Attine Ant Fungus Gardens	WYRLIGVRIEQGEDINDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153971_10140634	3300012076	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLQTKELGYNYWSTYTKSGIGGVQVTSLHCDPIGVDNRSLGVK
Ga0153999_10872141	3300012078	Attine Ant Fungus Gardens	LTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN
Ga0154000_10039652	3300012083	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLTKELGCNYSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAK
Ga0154000_10153947	3300012083	Attine Ant Fungus Gardens	LIGVRIEQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPI
Ga0154000_10244012	3300012083	Attine Ant Fungus Gardens	LIGVRIGQGEDINDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDN
Ga0154000_10301963	3300012083	Attine Ant Fungus Gardens	LIGVRIRQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDN
Ga0153988_10019791	3300012119	Attine Ant Fungus Gardens	IEQKEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVNNRSLGVKN*
Ga0153968_10303452	3300012123	Attine Ant Fungus Gardens	IGVRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLGAKN*
Ga0153997_10167893	3300012126	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLQTKELGYNYWSTYTKSGIGGVLVTSLYRDPIGVDNRSLGAKN*
Ga0153964_100146012	3300012130	Attine Ant Fungus Gardens	MDIKDVNDFNLRTKELGCNYWSTYTKSRIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153994_10027401	3300012131	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDLIG
Ga0153982_10052145	3300012135	Attine Ant Fungus Gardens	DFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLEAKN*
Ga0153982_10454201	3300012135	Attine Ant Fungus Gardens	VRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0153985_10010542	3300012136	Attine Ant Fungus Gardens	LIRVRIGQGEDVNDFNLRTKELGCSYWSTYTKSRIEGVQVTSLHRDPIGVNNRSLGAKN*
Ga0153985_10036116	3300012136	Attine Ant Fungus Gardens	VRIEQKEDVNDFNLQTKELGCNYWSTYTKSGIGKVQVTSLHRDPIGVNNRSLGVKN*
Ga0153985_10181211	3300012136	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLQTKELGYNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKISNNIKY
Ga0153985_10298801	3300012136	Attine Ant Fungus Gardens	QGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0153985_10517902	3300012136	Attine Ant Fungus Gardens	WYRLIGVRIGQGEDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIEVDNKSLGAKN*
Ga0153985_10641631	3300012136	Attine Ant Fungus Gardens	VRIEQGEDINDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDPIGVDNRSLE
Ga0153961_10116201	3300012139	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVISLHRDPIGVDNR
Ga0153961_10126651	3300012139	Attine Ant Fungus Gardens	NDFNLRTKKLGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0153961_10199521	3300012139	Attine Ant Fungus Gardens	NLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAEN*
Ga0153961_10215882	3300012139	Attine Ant Fungus Gardens	LIGVRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHHDPIGVDNRSL
Ga0153961_10323021	3300012139	Attine Ant Fungus Gardens	MGRKIGQGDNVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLG
Ga0153961_10840621	3300012139	Attine Ant Fungus Gardens	LIGVRIDQGEDINDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0153958_10254781	3300012141	Attine Ant Fungus Gardens	LRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAEN*
Ga0153958_10408541	3300012141	Attine Ant Fungus Gardens	MGRKIGQGDNVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVD
Ga0153958_10801191	3300012141	Attine Ant Fungus Gardens	LIGVRIKQREDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0153996_10020021	3300012144	Attine Ant Fungus Gardens	VRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVNNRSLGVKN*
Ga0153996_10103331	3300012144	Attine Ant Fungus Gardens	LIGVRIEQGEDVNDFNLRTKELGCNYWSTYTKSEIGGVQVTSLHRDPIGVNNRSLGAKN*
Ga0153996_10142662	3300012144	Attine Ant Fungus Gardens	LIGVGIRQGEDVNDFNLQTKELGYNYWSTYTKPGIEGVQVTSLHRDPIGVDNRSLGAKN*
Ga0153996_10378641	3300012144	Attine Ant Fungus Gardens	VRIGQGEEINDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHCDPIGVDN
Ga0153996_10780331	3300012144	Attine Ant Fungus Gardens	LIGVRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHCDPIGVDN
Ga0153974_10480082	3300012180	Attine Ant Fungus Gardens	VRIGQGEDVNDFNLQTKELGYNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKISNNI
Ga0157361_10054702	3300012995	Fungus Garden	LIGVRIEQGKAVNDFNLRTKELGCNYWSTYTKSRIREVQVISLYRDPIGVDNRSLESKN*
Ga0157361_10070084	3300012995	Fungus Garden	MGARIGQGEDVNDFNLQTKELGYNYWSTYTKSRIGEVQVINLHRDPIGVDNRSLGAKN*
Ga0157361_10127833	3300012995	Fungus Garden	LIGMRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVISLHCDPIGVDNRSLGAKN*
Ga0157361_10132811	3300012995	Fungus Garden	VRIEQVEDVNDFNLQTKELGYNYRSTYTKSRIGGVQVTSLHRDPIGVDNRSLGVKN*
Ga0157361_10524881	3300012995	Fungus Garden	EAVNDFNLRTKELRCNYWSTYTKSRIGGVQVISLHRDPIGVNNRSLGPKN*
Ga0157362_10028348	3300012998	Fungus Garden	LIGVRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGRVQVTSLHHDPIGVDNRSLGATN*
Ga0157362_10081857	3300012998	Fungus Garden	MRIGQGGGINDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHHDFIGVDNRSLGSKN*
Ga0157362_10128402	3300012998	Fungus Garden	MRIGQGGGINDFNLQTKELGCNYWSTYTKSGIGGVQVTSLYRDSIGVDNRSLGAKN*
Ga0157362_10229254	3300012998	Fungus Garden	VRIEQGEDVNDFNLRTKELGCDYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0157362_10449173	3300012998	Fungus Garden	LIGVRIGQGENVNDFNLRTKGLGCNYWSTYTKSEIGGVQVTSLHRDPIGVDNRSLGVKN*
Ga0157362_10578824	3300012998	Fungus Garden	GGVNDFNLRTKGLGCNYWSTYTKSGIGGVQVISLHRDPIGVNNRSLGSKN*
Ga0157362_10883882	3300012998	Fungus Garden	VRIEQGKDVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGVK
Ga0157362_11058343	3300012998	Fungus Garden	MRIGQGGGVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHHDPIGVDN
Ga0157362_11221531	3300012998	Fungus Garden	LIGVRIGQGEDVNDFNLQTKELEYNYWSTYTKSGIGGVQVISLYCDPIGVNNRSLGLKN*
Ga0157362_11278711	3300012998	Fungus Garden	MGVRIGQGEDVNDFNLQTKELGYNYWSTYTKSRIGGVQVINLHCDPIGVDNRSLGAKN*
Ga0157362_11799382	3300012998	Fungus Garden	MRTGQGESVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHCDPIRVDNRSSGAKN
Ga0157362_12488911	3300012998	Fungus Garden	VRIEQVEDVNDFNLQTKELGYNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGVKN*
Ga0157363_11923582	3300012999	Fungus Garden	GVRIGQGKAVNDFNLQTKELECNYWSTYTKSGIGGIQVISLHRDPIGVDNRSLGPKI*
Ga0157363_12221321	3300012999	Fungus Garden	LIGVRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVISLHRDPIGVDNRSLG
Ga0157360_10104794	3300013000	Fungus Garden	MRIGQGGGVNDFNLRTKEFGCNYWSTYTKSGIGGVQVTSLHRDPIGVDN
Ga0157360_10130942	3300013000	Fungus Garden	MRIGQEEDVNDFNLQTKELGYNYWSTYTKSGIGGVQVISLYRDPIGVDNRSLGAKN*
Ga0157360_10159921	3300013000	Fungus Garden	LIGMRIGQEGGVNDFNLRTKEFGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0157360_10200934	3300013000	Fungus Garden	VRIGQRGDINDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAK
Ga0157360_10348731	3300013000	Fungus Garden	LIEVRIRQVKDINNFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRGLGVKN*
Ga0157360_10376003	3300013000	Fungus Garden	MRIGQGGGVNDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHHDPIGV
Ga0157360_10462131	3300013000	Fungus Garden	LIGVRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIEKVQVISLHRNPIGVDNRSLGAKN*
Ga0157360_10470333	3300013000	Fungus Garden	MRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVISLHCDPIGVD
Ga0157360_10480661	3300013000	Fungus Garden	MRIGQGGGVNDFNLRTKEFGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0157360_10671591	3300013000	Fungus Garden	LIGVRIEQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVISLHRDPIGVDNRSLGAK
Ga0157360_10684361	3300013000	Fungus Garden	LIGVRIGQGEDVNDFNLQTKELGYNYWSTYTKSRIGGVQVISLHCDPIGVDNRSLG
Ga0157360_11013252	3300013000	Fungus Garden	LIGVRIGQGEDVNDFNLQTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLG
Ga0157360_11059891	3300013000	Fungus Garden	LIGVRIGQGEDVNDFNLQTKELECNYWSTYTKSGIGGVQVISLYCDPIGVNNRSLGLKN*
Ga0157360_12434121	3300013000	Fungus Garden	LIRVGIGQGEDINDFNLRTKELGCNYWSTYTKSGIGGVQVTSLHRDPIGVDNRSLGAKN*
Ga0157364_11392672	3300013002	Fungus Garden	MGVRIGQGEDVNDFNLQTKELGYNYWSTYTKSRIGEVQVINLHRDPIGVDNRSLGAKN*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070726

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences