Metagenome Family F070766

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070766
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	88 residues
Representative Sequence	MRLGCHILYEAGDEQDGPWTREQLIEMNARFAERLEEAFRLGLESRESAAGQVKLPASLGPRRVTPLTREIQEGLWRSSAANALVFVAR
Number of Associated Samples	47
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.30 %
% of genes near scaffold ends (potentially truncated)	30.33 %
% of genes from short scaffolds (< 2000 bps)	90.16 %
Associated GOLD sequencing projects	41
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (77.049 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (33.607 % of family members)
Environment Ontology (ENVO)	Unclassified (66.393 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (89.344 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00239	Resolvase	2.46
PF04392	ABC_sub_bind	1.64
PF05869	Dam	1.64
PF13392	HNH_3	0.82
PF07750	GcrA	0.82
PF00816	Histone_HNS	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.46
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.46
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.64
COG2916	DNA-binding protein H-NS	Transcription [K]	0.82
COG5352	Uncharacterized conserved protein	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
All Organisms	root	All Organisms	22.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
cellular organisms	root	All Organisms → cellular organisms	22.13 %
Viruses	superkingdom	All Organisms → Viruses	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.31 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.82 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.03 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.57 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.74 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.74 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.82 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.82 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.10 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.64 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.82 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.82 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.10 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.28 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.64 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.82 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.82 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.10 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.64 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.64 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.82 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.82 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.10 %
Bradyrhizobium sp. CCGUVB1N3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	1.64 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.64 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.82 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.82 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100204430	All Organisms → cellular organisms → Bacteria → Proteobacteria	2597	Open in IMG/M
3300005332\|Ga0066388_100215308	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300005332\|Ga0066388_100254914	Not Available	2394	Open in IMG/M
3300005332\|Ga0066388_100349709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2124	Open in IMG/M
3300005332\|Ga0066388_101601469	Not Available	1146	Open in IMG/M
3300005332\|Ga0066388_102014425	Not Available	1035	Open in IMG/M
3300005332\|Ga0066388_103154169	Not Available	842	Open in IMG/M
3300005332\|Ga0066388_103885296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300005332\|Ga0066388_107444265	Not Available	549	Open in IMG/M
3300005332\|Ga0066388_108032898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300005332\|Ga0066388_108115384	Not Available	524	Open in IMG/M
3300005713\|Ga0066905_100365636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1158	Open in IMG/M
3300005713\|Ga0066905_101264107	Not Available	662	Open in IMG/M
3300005713\|Ga0066905_101426074	Not Available	628	Open in IMG/M
3300005764\|Ga0066903_100019589	All Organisms → cellular organisms → Bacteria	7132	Open in IMG/M
3300005764\|Ga0066903_100225818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2847	Open in IMG/M
3300005764\|Ga0066903_100284753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	2595	Open in IMG/M
3300005764\|Ga0066903_100601397	Not Available	1906	Open in IMG/M
3300005764\|Ga0066903_100722844	Not Available	1761	Open in IMG/M
3300005764\|Ga0066903_100902690	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300005764\|Ga0066903_100969912	Not Available	1549	Open in IMG/M
3300005764\|Ga0066903_100974013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1546	Open in IMG/M
3300005764\|Ga0066903_101294334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1361	Open in IMG/M
3300005764\|Ga0066903_101297929	Not Available	1359	Open in IMG/M
3300005764\|Ga0066903_101429149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	1301	Open in IMG/M
3300005764\|Ga0066903_101527516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1262	Open in IMG/M
3300005764\|Ga0066903_101737721	Not Available	1189	Open in IMG/M
3300005764\|Ga0066903_102041299	Not Available	1102	Open in IMG/M
3300005764\|Ga0066903_102087165	Not Available	1091	Open in IMG/M
3300005764\|Ga0066903_102664810	Not Available	969	Open in IMG/M
3300005764\|Ga0066903_102903872	Not Available	929	Open in IMG/M
3300005764\|Ga0066903_102935013	Not Available	924	Open in IMG/M
3300005764\|Ga0066903_103128938	Not Available	896	Open in IMG/M
3300005764\|Ga0066903_103433101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	855	Open in IMG/M
3300005764\|Ga0066903_104571727	Not Available	737	Open in IMG/M
3300005764\|Ga0066903_104806273	Not Available	718	Open in IMG/M
3300005764\|Ga0066903_105331353	Not Available	679	Open in IMG/M
3300005764\|Ga0066903_106122456	Not Available	629	Open in IMG/M
3300005764\|Ga0066903_106321258	Not Available	618	Open in IMG/M
3300005764\|Ga0066903_106533409	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_106533959	Not Available	607	Open in IMG/M
3300009792\|Ga0126374_10091650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1696	Open in IMG/M
3300009792\|Ga0126374_10600475	Not Available	812	Open in IMG/M
3300009792\|Ga0126374_11849429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300010043\|Ga0126380_10080530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1883	Open in IMG/M
3300010043\|Ga0126380_11345443	Not Available	624	Open in IMG/M
3300010046\|Ga0126384_10095109	Not Available	2183	Open in IMG/M
3300010047\|Ga0126382_10035366	All Organisms → cellular organisms → Archaea → Euryarchaeota	2787	Open in IMG/M
3300010047\|Ga0126382_10545088	Not Available	943	Open in IMG/M
3300010047\|Ga0126382_11692286	Not Available	590	Open in IMG/M
3300010048\|Ga0126373_11503503	Not Available	739	Open in IMG/M
3300010358\|Ga0126370_10966196	Not Available	775	Open in IMG/M
3300010359\|Ga0126376_10683286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	985	Open in IMG/M
3300010359\|Ga0126376_12821678	Not Available	535	Open in IMG/M
3300010360\|Ga0126372_10570776	Not Available	1079	Open in IMG/M
3300010361\|Ga0126378_10635079	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300010361\|Ga0126378_11654011	Not Available	727	Open in IMG/M
3300010361\|Ga0126378_11735475	Not Available	710	Open in IMG/M
3300010362\|Ga0126377_10642371	Not Available	1109	Open in IMG/M
3300010366\|Ga0126379_10525898	Not Available	1259	Open in IMG/M
3300010366\|Ga0126379_11133786	Not Available	888	Open in IMG/M
3300010366\|Ga0126379_11685152	Not Available	739	Open in IMG/M
3300010366\|Ga0126379_12138117	Not Available	661	Open in IMG/M
3300010366\|Ga0126379_12191717	Not Available	654	Open in IMG/M
3300010366\|Ga0126379_12214102	Not Available	651	Open in IMG/M
3300010366\|Ga0126379_13569451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300010376\|Ga0126381_100589782	Not Available	1580	Open in IMG/M
3300010376\|Ga0126381_101387225	Not Available	1016	Open in IMG/M
3300010376\|Ga0126381_102578736	Not Available	728	Open in IMG/M
3300010376\|Ga0126381_103999600	Not Available	574	Open in IMG/M
3300010398\|Ga0126383_10131370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	2303	Open in IMG/M
3300010398\|Ga0126383_11330993	Not Available	808	Open in IMG/M
3300010398\|Ga0126383_11731112	Not Available	714	Open in IMG/M
3300010398\|Ga0126383_12548368	Not Available	595	Open in IMG/M
3300010398\|Ga0126383_13022634	Not Available	549	Open in IMG/M
3300010398\|Ga0126383_13370180	Not Available	522	Open in IMG/M
3300012948\|Ga0126375_10491489	Not Available	912	Open in IMG/M
3300012971\|Ga0126369_10546384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	1223	Open in IMG/M
3300012971\|Ga0126369_12391956	Not Available	614	Open in IMG/M
3300016270\|Ga0182036_11114853	Not Available	654	Open in IMG/M
3300016294\|Ga0182041_11226312	Not Available	685	Open in IMG/M
3300016319\|Ga0182033_10115970	Not Available	2003	Open in IMG/M
3300016371\|Ga0182034_10549593	Not Available	969	Open in IMG/M
3300016371\|Ga0182034_11656507	Not Available	562	Open in IMG/M
3300016404\|Ga0182037_11128640	Not Available	687	Open in IMG/M
3300016445\|Ga0182038_10940228	Not Available	763	Open in IMG/M
3300016445\|Ga0182038_11451391	Not Available	615	Open in IMG/M
3300021560\|Ga0126371_11885037	Not Available	717	Open in IMG/M
3300021560\|Ga0126371_13502756	Not Available	530	Open in IMG/M
3300031573\|Ga0310915_10135627	Not Available	1693	Open in IMG/M
3300031679\|Ga0318561_10419078	Not Available	736	Open in IMG/M
3300031680\|Ga0318574_10959743	Not Available	501	Open in IMG/M
3300031719\|Ga0306917_10692071	Not Available	801	Open in IMG/M
3300031744\|Ga0306918_11027033	Not Available	640	Open in IMG/M
3300031763\|Ga0318537_10232474	Not Available	685	Open in IMG/M
3300031770\|Ga0318521_10840857	Not Available	560	Open in IMG/M
3300031833\|Ga0310917_10178918	Not Available	1412	Open in IMG/M
3300031833\|Ga0310917_10313709	Not Available	1062	Open in IMG/M
3300031879\|Ga0306919_11232876	Not Available	568	Open in IMG/M
3300031890\|Ga0306925_10811622	Not Available	970	Open in IMG/M
3300031890\|Ga0306925_10901719	Not Available	909	Open in IMG/M
3300031890\|Ga0306925_10914854	Not Available	901	Open in IMG/M
3300031890\|Ga0306925_11318027	Not Available	716	Open in IMG/M
3300031910\|Ga0306923_10625606	Not Available	1206	Open in IMG/M
3300031910\|Ga0306923_10956740	Not Available	934	Open in IMG/M
3300031910\|Ga0306923_11542244	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	693	Open in IMG/M
3300031912\|Ga0306921_12660147	Not Available	515	Open in IMG/M
3300031942\|Ga0310916_11593630	Not Available	530	Open in IMG/M
3300031946\|Ga0310910_10604095	Not Available	870	Open in IMG/M
3300031947\|Ga0310909_10789649	Not Available	785	Open in IMG/M
3300031954\|Ga0306926_10436016	Not Available	1615	Open in IMG/M
3300031954\|Ga0306926_10602864	Not Available	1341	Open in IMG/M
3300032001\|Ga0306922_11481257	Not Available	679	Open in IMG/M
3300032059\|Ga0318533_10235593	Not Available	1319	Open in IMG/M
3300032076\|Ga0306924_10440476	Not Available	1489	Open in IMG/M
3300032076\|Ga0306924_10540273	Not Available	1324	Open in IMG/M
3300032076\|Ga0306924_12619957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	503	Open in IMG/M
3300032261\|Ga0306920_100227506	All Organisms → cellular organisms → Bacteria → Proteobacteria	2783	Open in IMG/M
3300032261\|Ga0306920_101131180	Not Available	1134	Open in IMG/M
3300032261\|Ga0306920_103046113	Not Available	631	Open in IMG/M
3300033289\|Ga0310914_10441527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1178	Open in IMG/M
3300033290\|Ga0318519_10759223	Not Available	595	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.39%
Loam	Environmental → Terrestrial → Soil → Loam	33.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	33.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.79%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	33.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	32.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1002044303	3300005332	Tropical Forest Soil	MIEYAACPCDSDVIPCTRRGDELNGSWTREQLEEMSARFAERLEQAFELGLESRDSAAGQVKLPASTGPRWVTPLTREIQEALWRSADALVFVAR*
Ga0066388_1002153082	3300005332	Tropical Forest Soil	MRLGCHILYEAGDERDGLWSREQLIEMNTHFAERLEEAFRLGLESRASARREIKLPVTLGPRFVCPMVPEGLLRSVAAGETVFVARG*
Ga0066388_1002549143	3300005332	Tropical Forest Soil	MRLSCHTLYEAEDELDGLWSRERLIEMNTRFAKRLEEAFRLGLENRKSAAGQVRLPVGLSPRWSTPLCSAVSDGLWRSAASGATCFVAR*
Ga0066388_1003497092	3300005332	Tropical Forest Soil	MRLSWYEPGDERDGLWNREQLLEMDARFTERLEEAFELGLESRESAAGQVKLAASSGPRRVTPLTREIQEGLWRSSAANALVFVAR*
Ga0066388_1016014693	3300005332	Tropical Forest Soil	MRLSCHILYEAGDERDGLWTREQLIEMDAHFVAALERAFELGLESRASAANQVKLPVSPVPRRITPLTREIQEGLWRSSAVDAPVFVAH*
Ga0066388_1020144252	3300005332	Tropical Forest Soil	MRLGYHTLYEAEDELDGLWSRERLIEMNTRFAERLEEAFRLGLERRESAVGQVALPVSSGPRWVTPLTREIQEGLWRSSAANALVFVAR*
Ga0066388_1031541691	3300005332	Tropical Forest Soil	MRLGYSLEPDDELDGAWSREQLVDMNARFVAALNRAIELGLESRASAAGQVKLPATLGPRWVTPLTPEIRDALWRSSAANALVFIVR*
Ga0066388_1038852963	3300005332	Tropical Forest Soil	MRLAYRALYEPGDEQDGPWTRERLEQMNASFVAALERAFELGLESRESAAGQIKLAASTGPRWVTPLTREIQEGLWRSAASDA
Ga0066388_1074442651	3300005332	Tropical Forest Soil	MRLSYHTPYEPGDEQNGAWSREQLEEMNARFVERLEEAFRLGLESRESAAGQVKLPASLGPRWVTPLTREVQEGLWRSAADTPVFVAR*
Ga0066388_1080328981	3300005332	Tropical Forest Soil	EDPEPGTWSREALEAMNTRFTERLEQAFELGLESRTSAAGEIKLKPSLGPRWVTPLTREIQEGLWRSSAANALVFIAR*
Ga0066388_1081153842	3300005332	Tropical Forest Soil	FNGHSHLADPNEDLDEGTWTRERLEQMNASFVAALESAFELGLENRKSAAGQVALPASTGPRWVTPLTREIQEGLWRSSAANALVFIAR*
Ga0066905_1003656361	3300005713	Tropical Forest Soil	MRLDVHEPDDEPDETWTDEQLLEMNARFVDRLERAFDCGLESRASAAGQIKLAASSGPRWATPLTREIQEGLWRSSASGATVFVAR*
Ga0066905_1012641072	3300005713	Tropical Forest Soil	RCLVSPDDRLRCPSMRFNSHSHLANPNEDLGEGPWSREQLIEMNARFAERLEEAFRLGLERRESAAGQVKLPVSLGPRWVTPLTREIQEGLWRSAASDATMFVTRG*
Ga0066905_1014260741	3300005713	Tropical Forest Soil	MRLSCHTLYEAGDELDGLWSREQLIEMNTRFAERLEEAFRLGLESRESAAGQVKLPASLGPRWVTPLTREIREGLWRSSAADATMFV
Ga0066903_10001958912	3300005764	Tropical Forest Soil	MRLAALALALRDPADELDGTWTREQLEQMNAAFTTALERAFELGLESRESAAGQIKLRATLGPRWATPLTREIQEGLWRSSASDTTCFVARG*
Ga0066903_1002258185	3300005764	Tropical Forest Soil	MQLGYHTLTEAEDELDGLWSRERLIEMNARFTERLEQAFELGLENRKSAAGQVALPASTGPRWVTPLTREIQEGLWRSSAANALVFIAR*
Ga0066903_1002847533	3300005764	Tropical Forest Soil	MRFNGYYEPDEPDEPNGGWTREQLEEMNAAFTAALERAFELGLESRASATSQVKLPATSGPRWATPLTREIQEGLWSSSAANALVFIVR*
Ga0066903_1006013974	3300005764	Tropical Forest Soil	MRLSCHILTEPGDERDGPWTREQLIEMNTRFSERLEEAFRLGLESRASAAGQVKLPVSPVPRRVTPLPREIQEGLWRSAELVFIAR*
Ga0066903_1007228442	3300005764	Tropical Forest Soil	MRLGCHILYEAGDEQDGPWSREQLVEMDARFVAALERAFELGLESRASAANQVKLPASTGPRRVTPLTREIQEGLWRSSAANALVFVAR*
Ga0066903_1009026901	3300005764	Tropical Forest Soil	MRLAPFAHALYEPNDERHGEWSREELEAMNAAFAARLEEAFRLGLESRESAAGQVKLPASLGPRWTTPLTREIQEGLWRSSAANALVFVAR*
Ga0066903_1009699123	3300005764	Tropical Forest Soil	MRLAYRALYEPGDEQDGPWTRERLEQMNASFVAALERAFELGLESRESAAGQIKLAASTGPRWVTPLTREIQEGLWRSAASDATMFVTR
Ga0066903_1009740133	3300005764	Tropical Forest Soil	MRLAYRALYEPGDEQDGPWSREQLIEMNARFTERLEEAFRLGLESRESAAGQVKLPVSLGPRRVTPLTREIQEGLWRSSAANALVFIAR*
Ga0066903_1012943343	3300005764	Tropical Forest Soil	MLNPLNGRHWPYLTYDPNDDRDGPWTHEQLVEMDARFVAALERAFEAGLESRASAAGQIKLKPSLGPRWVTPLTQEIQEGLWRSSAANALVFITR*
Ga0066903_1012979293	3300005764	Tropical Forest Soil	SPRCPSMRFNGHSHFADPADERDGPWTREQLIEMDARFAERLEEAFRLGLERRESAAGQVKLPVSLGPRWTTPLTREIQEGLWRSSAASALVMVVR*
Ga0066903_1014291492	3300005764	Tropical Forest Soil	MLNSLNGHAWPYLTYDPNDDRDGPWTREQLIEMDARFTERLEEAFRLGLERRESAAGQIKLKPSLGPRWATPLTREIQEGLWRSSAANALVFITR*
Ga0066903_1015275165	3300005764	Tropical Forest Soil	MRLAALALALHDPADELDGTWPREQLLEMDSRFTAALERAFELELERRSSARAQVALPASRSAPRWTTPLTREIQEGLWCSSAAANALVFVAR*
Ga0066903_1017377211	3300005764	Tropical Forest Soil	PASPRWLSMRLGYSLEPDDELDGAWSREQLVDMNARFVAALNRAIELGLESRASAAGQVKLPATLGPRWVTPLTPEIRDALWRSSAANALVFIVR*
Ga0066903_1020412992	3300005764	Tropical Forest Soil	MRLGCHILYETEDERDGLWSREQLIEMNARFTERLERAFALGLESRASAAGQVKLPASPSPRWVSPLTREIQEGLWRSSAANALVFIAR*
Ga0066903_1020871651	3300005764	Tropical Forest Soil	MLNRLNGHIWSHLTYDPNDERDGPWSREQLLEMDARFTERLEEAFRLGLERRESAAGQVKLPVSLGPRWTTPLTREIQEGLWRSSAANALVFIAR*
Ga0066903_1026648102	3300005764	Tropical Forest Soil	MRLSCHTLYEAGDELDGLWSREQLFEMNARFTERLEEAFRLGLESRESAAGQVKLPASTGPRRVTPLTREIQEGLWRSSAADALVFITR*
Ga0066903_1029038723	3300005764	Tropical Forest Soil	MRLNALALALRDPADELNGLWTREQLEAQNAAFAAALNRAFELGLESRASAAGQVRLKPTLGPRWTTPLTREIQEGLWRSSAASSLVFVARG*
Ga0066903_1029350133	3300005764	Tropical Forest Soil	MRLGCHILYEAGDERDGPWTREQLIEMDARFVAALERAFEAGLESRASAAAQVKLPSAGPRRVTPLVREIQDGLWRSADLVFVAR*
Ga0066903_1031289382	3300005764	Tropical Forest Soil	DRVRCPSMRFNGHSHLADPNEDLDEGTWSRERLIEMNTRFTERLEEAFRLGLERRASAAGQVKLPVSLGPRWTTPLTREIQEGLWRSSAASALIAVVR*
Ga0066903_1034331011	3300005764	Tropical Forest Soil	MRVGYHTLYEAGDEQDGLWTREQLVEMDARFAAALERAFELGLESRASAAAQVNLRPSLGPRWVIPLVREVQEGLWRSSA
Ga0066903_1045717272	3300005764	Tropical Forest Soil	MRLNGHILYEAGDELDGLWSREQLIEMNTRFTERLEEAFRLGLESRESAAGQVKLPVSLGPRWATPLPRAIQEGRWSSAADALVFVAR*
Ga0066903_1048062732	3300005764	Tropical Forest Soil	MLNPLNGRARPYLTYDPNDDRDGPWTREQLEEMNARFTERLEEAFRLGLERRASAAGQVKLPASSGPRWSTPLCAVVQDGLWRSAAGGETVFVTR*
Ga0066903_1053313532	3300005764	Tropical Forest Soil	MRLNVSNYLFIDNHCADPNEDLGEGPWTREQLEQMNASFVAALESAFELGLESRESAAGQIKLAASTGPRWVTPLTREIQEGLWRSAASDATMFVTR
Ga0066903_1061224562	3300005764	Tropical Forest Soil	MRLGCHILYETGDERDGPWTREQLIEMDARFVAALERAFELGLESRASAANQVKLPASTGPRRVTPLTREIQEGLWRSSAANALVFVAR*
Ga0066903_1063212582	3300005764	Tropical Forest Soil	MRLGCHILYEAGDERDGPWSREQLEEMNARFTERLEEAFRLGLESRASAANQVKLPASTGPRRVTPLPREIQEGLWRSSAANALVFVAR*
Ga0066903_1065334091	3300005764	Tropical Forest Soil	MRLGCHILYEAGDERDGLWSHEQLEEMNARFTERLEEAFRLGLESRASAAGQVKLPVSPVPRRVTPLVREIQDGLWRSADLVFVAR*
Ga0066903_1065339592	3300005764	Tropical Forest Soil	MRLGCHILYEVGDERDGLWTREQLEQMNANFVAALESAFELGLESRASAAGQVKLPASPSPRRVTPLTREVQEGLWRSSAANALVFIAR*
Ga0126374_100916503	3300009792	Tropical Forest Soil	MRLSCHTLYEAEDELDGLWSRERLIEMNARFTERLEEAFRLGLESRESAAGQVKLPASPGPRRVTPLTREIQEGPWRSSAANALVFITR*
Ga0126374_106004753	3300009792	Tropical Forest Soil	MRFNGHSHLADPNEDLDEGTWSRERLIEMNTRFTERLEEAFRLGLERRESAAGQVKLPMSLGPRWTTPLTREIQEGLWRS
Ga0126374_118494292	3300009792	Tropical Forest Soil	MRLGISLEPDDELDGIWTREQLVDMNARFVAAVNAVLELGLESRASAATQVKLPASSGPRLSTPLTREIQEG
Ga0126380_100805302	3300010043	Tropical Forest Soil	MRLDVHEPDDEPDETWTHEQLLEMNARFVDRLERAFDCGLESRASAAGQIKLAASSGPRWATPLTREIQEGLWRSSASGATVFVAR*
Ga0126380_113454432	3300010043	Tropical Forest Soil	MRLNGHILYEAGDELDGLWSREQLIEMNTRFTERLEEAFRLGLESPESAAGQVKLPVSLGPRWATPLPRAIQEGLWSSAADALVFVAR*
Ga0126384_100951092	3300010046	Tropical Forest Soil	MLNQLNGRHWPYLTYDPNDTLDGSWTHEQLIEMDARFTERLEEAFRLGLENRESAAGQVKLPASLGPRWTTPLTREIQEGLWRSSAASTFVAVVR*
Ga0126382_100353662	3300010047	Tropical Forest Soil	MLNPLNGHRWPHLKYDPNDDRDGPWTHEQLIEMDARFAERLEEAFRLGLERRESAAGQVKLPASTGPRWTTPLTREIQEGLWRSSAASALVMVVR*
Ga0126382_105450881	3300010047	Tropical Forest Soil	MRLSCRTLYEAGDELDGLWSRERLIEMNARFTERLEEAFRLGLESRESAAGQVKLPVSLGPRWVTPLTREIQEGLWRSSAANALVFIAR*
Ga0126382_116922861	3300010047	Tropical Forest Soil	PAPKHSRAAPAVEPDDEPDETWTHEQLLEMNARFVDRLERAFDCGLESRASAAGQIKLAASSGPRWATPLTREIQEGLWRSSASGATVFVAR*
Ga0126373_115035032	3300010048	Tropical Forest Soil	MRFNGHSHLADPNEDLDEGTWSRERLIEMNTRFTERLEEAFRLGLESRESAASRVKLPVSLGPRWATPLTREIQEGLWRSSAANALVFVAR*
Ga0126370_109661961	3300010358	Tropical Forest Soil	MRFNGHSHLADPNEDLGEGTWTRERLEQMNASFVAALESAFELGLESRASAAGQVKLPAGTGPRWVTPLTREIQEGLWRSSAASALVMMTRG*
Ga0126376_106832861	3300010359	Tropical Forest Soil	MRLSCHTLYEAEDELDGLWSRERLIEMNTRFAERLEEAFRLGLESRESAAGQVKLPAGTGPRWVTPLTREIQEGLWRSSAANALVFVAR*
Ga0126376_128216782	3300010359	Tropical Forest Soil	MRFNGQSHLADPNEDLGEGTWTRERLEQMNASFVAALERAFELGLESRESAAGQIKLAASTGPRWVTPLTREIQEGLWRSAASDATMFVTRG*
Ga0126372_105707761	3300010360	Tropical Forest Soil	MRFNGHSHLADPNEDLDEGTWSRERLIEMNARFAERLEEAFRLGLERRASAAGQVKLPAGTGPRWVTPLTREIQEGLWRSSAASALVMMTRG*
Ga0126378_106350792	3300010361	Tropical Forest Soil	MYEAADDRDGPWSREQLIEMNARFTERLEEAFRLGLESRESAAGQVKLPASLGPRRVTPLTREIQEGLWRSSAANALVFITR*
Ga0126378_116540111	3300010361	Tropical Forest Soil	MRLGCHILYEAGDEQDGLWRRERLVEMDARFVAALERAFELGLESRASAANQVKLPASLGPRWVTPLTREIQEGLWRSSAANALVFVAR*
Ga0126378_117354752	3300010361	Tropical Forest Soil	MQLGYHTLTEAEDELDGLWSRERLIEMNARFTERLEEAFRLGLESRESTAGQVKLPVGLGPRRVTPLTREIQEGLWRSSAANALVFIAR*
Ga0126377_106423712	3300010362	Tropical Forest Soil	MRLSYHTLYEAGDERDGLWSREQLIEMNARFTERLEEAFRLGLESRESAAGQVKLPASLGPRRVTPLTREIQEGLWRSSAANALVFVAR*
Ga0126379_105258982	3300010366	Tropical Forest Soil	MQFNGCSHFADPADERIGSWTREELETMNAHFAERLEEAFRLGLERRASAASQVKLPASLGPRWTTPLTREIQEGLWRSSAASALVMVVR*
Ga0126379_111337862	3300010366	Tropical Forest Soil	MRLGCHILYEAGDEQDGPWTREQLIEMNARFAERLEEAFRLGLESRASAANQVKLPASTGPRRVTPLTREIQEGLWRSSAADAPVFVAR*
Ga0126379_116851522	3300010366	Tropical Forest Soil	MRLAYRALYEPGDEQDGPWTRERLEQMNASFVAALERAFELGLESRESAAGQIKLAASTGPRWVTPLTREIQEGLWRSAASDATMFVTRG*
Ga0126379_121381171	3300010366	Tropical Forest Soil	LSYHTLYEPGDEQNGPWTREQLLEMNARFAERLEQAFELGLESRESAAGQVKLPVSLGPRWVTPLTREIQEGLWRSSAADVPVFVAR*
Ga0126379_121917171	3300010366	Tropical Forest Soil	MRFNGHSHLADPADERDGLWTHEELETMNTRFAERLEQAFALGLEHRESAAGQVKLPVTPGARWVTPLTREIQEGLWRSSAASALVMMTRG*
Ga0126379_122141022	3300010366	Tropical Forest Soil	MRLGCHILYEAGDERDGLWTHEQLIEMDARFVAALERAFELGLESRASAANQVKLPASTGPRRVTPLTREIQEGLWRSSAANALVFVAR*
Ga0126379_135694511	3300010366	Tropical Forest Soil	AALALALHDPADELDGTWPREQLLEMDSRFTAALERAFELELERRSSARAQVALPASRSAPRWTTPLTREIQEGLWCSSAAANALVFVAR*
Ga0126381_1005897823	3300010376	Tropical Forest Soil	MQFNGCSHFADPADERIGSWTREELETMNAHFAERLEEAFRLGLERRESAAGQVKLPMSLGPRWLTPLCSVVQDGLWRSAASDSTVFVARG*
Ga0126381_1013872253	3300010376	Tropical Forest Soil	MYEAADDRDGPWSREQLIEMNARFTERLEEAFRLGLESRESAAGQVKLPASLGPRRVTPLTREIQEGLWRSSAANALVFVAR*
Ga0126381_1025787362	3300010376	Tropical Forest Soil	ADERIGSWTREELEAMNARFVAALERAFEAGLESRASAAGQVRLPVSLGPRWTTPLTREIQEGLWRSSAASALVMVVR*
Ga0126381_1039996002	3300010376	Tropical Forest Soil	AEDELDGLWSRERLIEMNTRFAERLEEAFRLGLERRESAVGQVALPVSSGPRWVTPLTREIQEGLWRSSAANALVFVAR*
Ga0126383_101313704	3300010398	Tropical Forest Soil	MRLGYHDEPDDELDGSWTHEQLEAQDARFAAALERAFELGLESRASAAGQITLKRGVGPRWVTPLAREIREGLWRSI*
Ga0126383_113309931	3300010398	Tropical Forest Soil	MRLGCHILYEAGDEQDGPWTREQLIEMNARFAERLEEAFRLGLESRESAAGQVKLPASLGPRWVTPLTREIREGLWRSSAADATMFVTRG*
Ga0126383_117311122	3300010398	Tropical Forest Soil	MRLGCHILYEAGDERDGPWSREQLEEMNARFTERLEEAFRLGLESRASAANQVKLPASTGPRRVTPLTREIQEGLWRSSAADAPVFVAR*
Ga0126383_125483682	3300010398	Tropical Forest Soil	MLNPLNGHARSPLTYDPNDDRDGPWTREQLEEMNARFTERLEQAFELGLERRESAAGQVKLPASLGPRWTTPLTKEIQEGLWRSSAASALVMVVR*
Ga0126383_130226341	3300010398	Tropical Forest Soil	MRFNGHSHVTDPADERIGSWIREELEAMNARFTERLEEAFRLGLESRESTAGQVKLPVSLGPRWTTPLTREIQEGLWRSSAASTFVAVVR*
Ga0126383_133701801	3300010398	Tropical Forest Soil	MRLGVLYEPDDEPDGGWTREQLLEMDARFVAAVEQAFRLGQEHQTSAASQVTLPASSGPRRSTPLTREIQEGLWRSAAANALVFRAPVP*
Ga0126375_104914891	3300012948	Tropical Forest Soil	MRFNSHSHLANPNEDLGEGPWSREQLIEMNARFAERLEEAFRLGLERRESAAGQVKLPVSLGPRWVTPLTREIQEGLWRSAASDATMFVTRG*
Ga0126369_105463843	3300012971	Tropical Forest Soil	MLNSLNGHAWPYLTYDPNDDRDGPWTREQLIEMDARFTERLEEAFRLGLERRESAAGQVKLPVSLGPRWTTPLTREIQEGLWRSSADALVMVVR*
Ga0126369_123919561	3300012971	Tropical Forest Soil	PRWLSMRLGYSLEPDDELDGAWSREQLVDMNARFVAALNRAIELGLESRASAAGQVKLPATLGPRWVTPLTPEIRDALWRSSAANALVFIVR*
Ga0182036_111148531	3300016270	Soil	MRLGTLYEPGDEQNGGWSREQLENMNARFSERLEEAFRLGLENRTSAAGQVKLPVSLGPRFVTTLCQATCDGLFRSAATDST
Ga0182041_112263121	3300016294	Soil	QNGGWSREQLENMNARFSERLEEAFRLGLENRTSAAGQVKLPVSLGPRFVTALCQATCDGLFRSAATDTTVFIARG
Ga0182033_101159702	3300016319	Soil	MRLGTLYEPGDEQNGGWSREQLENMNARFSERLEEAFRLGLENRTSAAGQVKLPVSLGPRFVTTLCQATCDGLFRSAATDTTVFIARG
Ga0182034_105495932	3300016371	Soil	MRLNALALALRDPADELNGLWTREQLEAQNAAFAAALNRAFELGLESRASAAGQVRLKPTLGPRWTTPLTREIQEGRWRSSAASSLVFV
Ga0182034_116565072	3300016371	Soil	MRLGTLYEPGDEQNGGWTREQLEAMNARFSERLERAFAWGLEHRESARREVKLPAGLPRWTTPLTREIQEGLWRSSAANALVFVAR
Ga0182037_111286402	3300016404	Soil	MRLNVPNYLFLDDRCVDPGDPELGTWSREALETMNARFSERLEEAFRLGLESRASASNQVKLPLSLGPRFVTALCQTTCDGLFRSAATDSTVFVARG
Ga0182038_109402281	3300016445	Soil	MRLAALALALHDPADELDGTWPREQLLEMDSRFTAALERAFELELERRSSARAQVALPASRSGPRWTTPLTREIQEGLWRSSAANALVFVARG
Ga0182038_114513912	3300016445	Soil	LGEGAWTSERLLEMNAQFVAALERAFACGLESRASAAGQVKLPVSLGPRWVTPLTREIQEGLWRSSAANALVFVAR
Ga0126371_118850372	3300021560	Tropical Forest Soil	MQFNGCSHFADPADERIGSWTREELETMNAHFAERLEEAFRLGLERRASAASQVKLPASLGPRWTTPLTREIQEGLWRSSAASALVMVVR
Ga0126371_135027561	3300021560	Tropical Forest Soil	MRLGCHILYEAGDEQDGPWTREQLIEMNARFAERLEEAFRLGLESRESAAGQVKLPASLGPRRVTPLTREIQEGLWRSSAANALVFVAR
Ga0310915_101356272	3300031573	Soil	MRLSYHYEPEDEQNGPWSREQLIEMNARFTERLEETFRLGLESRTSAAGQVKLRASTGPRFVTALCQATCDGLFRSAATDTTVFIARG
Ga0318561_104190782	3300031679	Soil	MRLRYRTPCEPGDERDGGWTREQLETMNDRFTERLEEAFRLGLESRASASNQVRLPVSLGPRWSIPLTREISEGLWRSSAADAPVFVAR
Ga0318574_109597432	3300031680	Soil	MQPCHIRHEPGDEQNGGWTREQLLEMNAQFVAAMERAFELGLESRASAAGQVKLAASTGPRWTTPLTREIQEGLWRSSASALVF
Ga0306917_106920711	3300031719	Soil	LSMRLGVYEPDDELDGAWSREQLEAMNARFADQLERAFVLGLESRESAAGQVKLPVSLGPRFVTALCQATCDGLFRSAATDATVFVAR
Ga0306918_110270332	3300031744	Soil	MRLGILYEPGDEQNGGWTREQLEAMNARFSERLERAFAWGLEHRESARREVKLPAGLPRWTTPLTREIQEGLWRSSAANALVFVAR
Ga0318537_102324742	3300031763	Soil	MRLGTLYAPGDEQHGAWPHERLLEMDAHFSAALEHAFELGLERRESAAGQVKLPASPGPRWAISLPREIQEGLWRSSAADTLV
Ga0318521_108408572	3300031770	Soil	ILYEPGDEQNGGWTREQLEAMNARFSERLERAFAWGLEHRESARREVKLPAGLPRWTTPLTREIQEGLWRSSAANALVFVAR
Ga0310917_101789183	3300031833	Soil	MRLGIAYAPGDERDGPWTHEQLIEMNTRFAERLEHAFELGLESRESAAGQVKLPASSGPRWTTPLTREIQEGLWRSSAASVLVMVVR
Ga0310917_103137091	3300031833	Soil	MRLRTLYEPGDEQNGGWSREQLENMNARFSERLEEAFRLGLENRTSAAGQVKLPVSLGPRFVTALCQATCDGLFRSAATDTTVFIARG
Ga0306919_112328762	3300031879	Soil	MRLNALALALRDPADELNGLWTREQLEAQNAAFAAALNRAFELGLESRASAAGQVRLKPTLGPRWAIPLTREIQEGLWRSSAANALVMVARG
Ga0306925_108116222	3300031890	Soil	MRLDHSFSDEPEDARDGPWSREQLETMNAQFVAAMERAFELGLESRASAASQVKLPTSSGPRFVTPLPREIAEGLWRSSADALVMVAR
Ga0306925_109017191	3300031890	Soil	MRLGVYEPDDELDGAWSREQLEAMNARFADQLERAFVLGLESRESAAGQVKLPVSLGPRFVTALCQATCDGLFRSAATDATVFVAR
Ga0306925_109148541	3300031890	Soil	MRLGTLYAPGDEQHGAWPHERLLEMDAHFSAALEHAFELGLERRESAAGQVKLPASPGPRWAISLPREIQEGLWRSSAADTLVFVTR
Ga0306925_113180271	3300031890	Soil	MRLSYHYEPEDEQNGPWSREQLIEMNARFTERLEETFRLGLESRTSAAGQVKLRASTGPRFVTALCQATCDGLFRSAATDSTVFVARG
Ga0306923_106256062	3300031910	Soil	MRLRTLYEPGDEQNGGWSREQLENMNARFSERLEEAFRLGLENRTSAAGQVKLPVSLGPRFVTTLCQATCDGLFRSAATDSTVFVARG
Ga0306923_109567401	3300031910	Soil	VIDLSAPLLHAAPMRFGDHTPCEPDDELDGLWSREQLIEMNARFTERLEEAFRLGLESRASAAGQVKLPGSLGPRWATPLTREIQEGLWRSSASVVFVARS
Ga0306923_115422441	3300031910	Soil	ELDGAWSREQLVDMNARFVAALEQAFACGLESRESAASEIKLRPSLGPRWATPLTREIQEGLWRSSADALVMVAR
Ga0306921_126601471	3300031912	Soil	MRLDHYPSYEPDDALDEGAWTREQLLDMNAQFVATLEQAFELGLESRASAANKIKLRPSPGPRWVTPLTREIQEGLWR
Ga0310916_115936301	3300031942	Soil	ENMNARFSERLEEAFRLGLENRTSAAGQVKLPVSLGPRFVTALCQATCDGLFRSAATDTTVFIARG
Ga0310910_106040952	3300031946	Soil	MRLGDPYDPNDELDGIWTRERLLEMDAHFVAALEKAFELGLESRASASGQVKLPASTGPRWVTPLTREIQEGLWRSSAASPLTMVTR
Ga0310909_107896492	3300031947	Soil	MRLGVYEPDDELDGAWSREQLEAMNARFADQLERAFVLGLESRESAAGQVKLPVSLGPRWATPLTREIQEGLWRSSAANALVFIAR
Ga0306926_104360163	3300031954	Soil	MRLGIAYAPGDERDGPWTHEQLIEMNTRFAERLEHAFELGLESRESAAGQVKLPASSGPRWTTPLTREIQDGLWRSSAASVLVMVVR
Ga0306926_106028641	3300031954	Soil	MRLGDPYDPNDELDGIWTRERLLEMDAHFVAALEKAFELGLESRASASGQVKLPASTGPRWATPLTREIQEGLWRSSAADALVFVAR
Ga0306922_114812571	3300032001	Soil	LSIRLRTLYEPGDEQNGGWSREQLENMNARFSERLEEAFRLGLENRTSAAGQVKLPVSLGPRFVTALCQATCDGLFRSAATDTTVFIARG
Ga0318533_102355931	3300032059	Soil	DPYDPNDELDGIWTRERLLEMDAHFVAALEKAFELGLESRASASGQVKLPASTGPRWATPLTREIQEGLWRSSAADALVFVAR
Ga0306924_104404762	3300032076	Soil	MRLGIAYAPGDERDGPWTHEQLIEMNTRFAERLEHAFELGLESRESAAGQVKLPASSGPRWTTPLTREIQEGLWRSSAASALVMVVR
Ga0306924_105402733	3300032076	Soil	MIDYAAPMRLGTLYEPEDEVDGVWSREQLLEMDARFVAALEQAFRLGHEHRTSAAGQVKLPASTGPRWVTPLTREIQEG
Ga0306924_126199571	3300032076	Soil	MRLGTRYEPGDEQNGGWSREQLETMNARFTERLEEAFRLGLESRASASNQVKLPLSLGPRFVTALCQTTCD
Ga0306920_1002275065	3300032261	Soil	MRLNALALALRDPADELNGLWTREQLEAQNAAFAAALNRAFELGLESRASAAGQVRLKPTLGPRWTTPLTREIQEGRWRSSAASSLVFVARG
Ga0306920_1011311801	3300032261	Soil	MRLSYHYEPEDEQNGPWSREQLIEMNARFTERLEETFRLGLESRTSAAGQVKLRASTGPRFVTALCQATCDGLFRSAATDSTVF
Ga0306920_1030461132	3300032261	Soil	MRLDYCFNDDRAEDPEPGTWSKEQLVEMDARFTERLEQAFELGLELRASAAGQVKLPVSLGPRFVTALCDGLLRSAAGGETVFVAR
Ga0310914_104415272	3300033289	Soil	MRLSYHTLPEAEDELDGLWSRERLIEMNARFTERLEEAFRLGLENRKSAAGQVKLPVSPGPRWATPLTREIQEGLWRSSASVVFVARS
Ga0318519_107592231	3300033290	Soil	HCADPEIPELHGSWSREQLETMNAQFVAAMERAFELGLESRASAASQVKLPTSSGPRFVTPLPREIAEGLWRSSADALVMVAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070766

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences