Metagenome / Metatranscriptome Family F070783

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070783
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	54 residues
Representative Sequence	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKI
Number of Associated Samples	89
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.00 %
% of genes near scaffold ends (potentially truncated)	33.61 %
% of genes from short scaffolds (< 2000 bps)	96.72 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (81.967 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (72.131 % of family members)
Environment Ontology (ENVO)	Unclassified (85.246 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (68.852 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.86% β-sheet: 0.00% Coil/Unstructured: 36.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF15699	NPR1_interact	0.82
PF12838	Fer4_7	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
All Organisms	root	All Organisms	18.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
cellular organisms	root	All Organisms → cellular organisms	18.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	18.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	17.21 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	17.21 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	17.21 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	16.39 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	13.11 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	13.11 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	13.11 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	13.11 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	13.11 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	13.11 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	13.11 %
Crustacea	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	13.11 %
Multicrustacea	superclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	13.11 %
Hexanauplia	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	13.11 %
Copepoda	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	10.66 %
Neocopepoda	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	10.66 %
Podoplea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	9.02 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	0.82 %
Harpacticoida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	9.02 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	0.82 %
Harpacticidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	9.02 %
Tripsacinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae	0.82 %
Tigriopus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae → Tigriopus	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	9.02 %
Tigriopus californicus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae → Tigriopus → Tigriopus californicus	0.82 %
Zea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	8.20 %
Panicum sect. Panicum	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum	0.82 %
Zea mays	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	0.82 %
Tigriopus californicus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae → Tigriopus → Tigriopus californicus	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	8.20 %
Panicum hallii	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii	0.82 %
Zea mays	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	0.82 %
Tigriopus californicus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae → Tigriopus → Tigriopus californicus	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.97 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	8.20 %
Panicum hallii var. hallii	varietas	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii → Panicum hallii var. hallii	0.82 %
Zea mays	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	0.82 %
Tigriopus californicus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae → Tigriopus → Tigriopus californicus	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005347\|Ga0070668_100521978	Not Available	1031	Open in IMG/M
3300005353\|Ga0070669_101455513	Not Available	595	Open in IMG/M
3300005355\|Ga0070671_101823453	Not Available	541	Open in IMG/M
3300005440\|Ga0070705_100848427	Not Available	731	Open in IMG/M
3300005466\|Ga0070685_10890556	Not Available	662	Open in IMG/M
3300005544\|Ga0070686_101590458	Not Available	553	Open in IMG/M
3300005617\|Ga0068859_102855142	Not Available	530	Open in IMG/M
3300005843\|Ga0068860_101366037	Not Available	730	Open in IMG/M
3300009553\|Ga0105249_13519518	Not Available	504	Open in IMG/M
3300009975\|Ga0105129_108771	Not Available	656	Open in IMG/M
3300009981\|Ga0105133_101534	Not Available	1150	Open in IMG/M
3300009981\|Ga0105133_123471	Not Available	559	Open in IMG/M
3300009989\|Ga0105131_113121	Not Available	743	Open in IMG/M
3300009992\|Ga0105120_1025604	Not Available	675	Open in IMG/M
3300009992\|Ga0105120_1048398	Not Available	535	Open in IMG/M
3300009994\|Ga0105126_1009088	Not Available	918	Open in IMG/M
3300010371\|Ga0134125_11216530	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	823	Open in IMG/M
3300010403\|Ga0134123_12067562	Not Available	629	Open in IMG/M
3300014325\|Ga0163163_11741583	Not Available	684	Open in IMG/M
3300014968\|Ga0157379_11524251	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	651	Open in IMG/M
3300015270\|Ga0182183_1041439	Not Available	656	Open in IMG/M
3300015278\|Ga0182099_1049608	Not Available	565	Open in IMG/M
3300015280\|Ga0182100_1020272	Not Available	843	Open in IMG/M
3300015280\|Ga0182100_1036026	Not Available	709	Open in IMG/M
3300015284\|Ga0182101_1044446	Not Available	663	Open in IMG/M
3300015293\|Ga0182103_1033944	Not Available	718	Open in IMG/M
3300015293\|Ga0182103_1076590	Not Available	558	Open in IMG/M
3300015301\|Ga0182184_1006681	Not Available	1207	Open in IMG/M
3300015309\|Ga0182098_1035961	Not Available	774	Open in IMG/M
3300015310\|Ga0182162_1044731	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	737	Open in IMG/M
3300015310\|Ga0182162_1094749	Not Available	567	Open in IMG/M
3300015311\|Ga0182182_1057507	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	659	Open in IMG/M
3300015312\|Ga0182168_1067886	Not Available	658	Open in IMG/M
3300015315\|Ga0182120_1050387	Not Available	737	Open in IMG/M
3300015315\|Ga0182120_1126319	Not Available	523	Open in IMG/M
3300015316\|Ga0182121_1065423	Not Available	694	Open in IMG/M
3300015317\|Ga0182136_1042741	Not Available	780	Open in IMG/M
3300015318\|Ga0182181_1061137	Not Available	628	Open in IMG/M
3300015320\|Ga0182165_1081943	Not Available	634	Open in IMG/M
3300015324\|Ga0182134_1054702	Not Available	733	Open in IMG/M
3300015325\|Ga0182148_1013119	Not Available	1120	Open in IMG/M
3300015325\|Ga0182148_1075633	Not Available	646	Open in IMG/M
3300015325\|Ga0182148_1093110	Not Available	599	Open in IMG/M
3300015326\|Ga0182166_1052881	Not Available	728	Open in IMG/M
3300015328\|Ga0182153_1107728	Not Available	578	Open in IMG/M
3300015329\|Ga0182135_1013476	Not Available	1163	Open in IMG/M
3300015330\|Ga0182152_1002092	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1942	Open in IMG/M
3300015330\|Ga0182152_1047860	Not Available	784	Open in IMG/M
3300015330\|Ga0182152_1129665	Not Available	541	Open in IMG/M
3300015331\|Ga0182131_1027157	Not Available	947	Open in IMG/M
3300015331\|Ga0182131_1074557	Not Available	673	Open in IMG/M
3300015332\|Ga0182117_1125414	Not Available	574	Open in IMG/M
3300015332\|Ga0182117_1144708	Not Available	539	Open in IMG/M
3300015333\|Ga0182147_1067570	Not Available	727	Open in IMG/M
3300015337\|Ga0182151_1095796	Not Available	628	Open in IMG/M
3300015338\|Ga0182137_1007725	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1510	Open in IMG/M
3300015339\|Ga0182149_1123340	Not Available	582	Open in IMG/M
3300015339\|Ga0182149_1142905	Not Available	547	Open in IMG/M
3300015340\|Ga0182133_1071021	Not Available	760	Open in IMG/M
3300015340\|Ga0182133_1174066	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	525	Open in IMG/M
3300015348\|Ga0182115_1217804	Not Available	610	Open in IMG/M
3300015348\|Ga0182115_1261555	Not Available	549	Open in IMG/M
3300015349\|Ga0182185_1052717	Not Available	1076	Open in IMG/M
3300015349\|Ga0182185_1090623	Not Available	868	Open in IMG/M
3300015349\|Ga0182185_1128242	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	745	Open in IMG/M
3300015349\|Ga0182185_1229896	Not Available	563	Open in IMG/M
3300015350\|Ga0182163_1002362	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	2944	Open in IMG/M
3300015352\|Ga0182169_1106920	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	898	Open in IMG/M
3300015352\|Ga0182169_1301778	Not Available	516	Open in IMG/M
3300015353\|Ga0182179_1184562	Not Available	660	Open in IMG/M
3300015353\|Ga0182179_1229027	Not Available	596	Open in IMG/M
3300015354\|Ga0182167_1040492	Not Available	1552	Open in IMG/M
3300015354\|Ga0182167_1054702	Not Available	1381	Open in IMG/M
3300015354\|Ga0182167_1178720	Not Available	780	Open in IMG/M
3300015354\|Ga0182167_1209359	Not Available	711	Open in IMG/M
3300015354\|Ga0182167_1221168	Not Available	689	Open in IMG/M
3300017412\|Ga0182199_1076285	Not Available	735	Open in IMG/M
3300017414\|Ga0182195_1085264	Not Available	734	Open in IMG/M
3300017421\|Ga0182213_1102231	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	795	Open in IMG/M
3300017422\|Ga0182201_1011365	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	1144	Open in IMG/M
3300017422\|Ga0182201_1082536	Not Available	612	Open in IMG/M
3300017422\|Ga0182201_1097006	Not Available	579	Open in IMG/M
3300017447\|Ga0182215_1055308	Not Available	848	Open in IMG/M
3300017693\|Ga0182216_1023273	Not Available	1166	Open in IMG/M
3300017694\|Ga0182211_1148732	Not Available	557	Open in IMG/M
3300017694\|Ga0182211_1180710	Not Available	504	Open in IMG/M
3300020023\|Ga0182178_1000916	Not Available	1429	Open in IMG/M
3300025903\|Ga0207680_10489696	Not Available	875	Open in IMG/M
3300025986\|Ga0207658_11789381	Not Available	561	Open in IMG/M
3300026088\|Ga0207641_11589567	Not Available	656	Open in IMG/M
3300026118\|Ga0207675_100793733	Not Available	960	Open in IMG/M
3300028051\|Ga0268344_1020703	Not Available	543	Open in IMG/M
3300028054\|Ga0268306_1017444	Not Available	631	Open in IMG/M
3300028055\|Ga0268338_1027188	Not Available	591	Open in IMG/M
3300028150\|Ga0268343_1014868	Not Available	557	Open in IMG/M
3300028248\|Ga0268312_1005353	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	904	Open in IMG/M
3300028256\|Ga0268304_1005154	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	709	Open in IMG/M
3300028381\|Ga0268264_11764441	Not Available	629	Open in IMG/M
3300028473\|Ga0268319_1001921	Not Available	1074	Open in IMG/M
3300028473\|Ga0268319_1002025	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1056	Open in IMG/M
3300032464\|Ga0214492_1006844	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1817	Open in IMG/M
3300032464\|Ga0214492_1007144	Not Available	1793	Open in IMG/M
3300032466\|Ga0214503_1176216	Not Available	667	Open in IMG/M
3300032502\|Ga0214490_1039035	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1056	Open in IMG/M
3300032502\|Ga0214490_1090707	Not Available	699	Open in IMG/M
3300032548\|Ga0214483_1045929	Not Available	736	Open in IMG/M
3300032548\|Ga0214483_1081117	Not Available	531	Open in IMG/M
3300032590\|Ga0214489_1014494	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1123	Open in IMG/M
3300032593\|Ga0321338_1068457	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii → Panicum hallii var. hallii	1205	Open in IMG/M
3300032689\|Ga0214497_1043203	Not Available	992	Open in IMG/M
3300032699\|Ga0214494_1017144	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae → Tigriopus → Tigriopus californicus	1299	Open in IMG/M
3300032761\|Ga0314733_1050936	Not Available	793	Open in IMG/M
3300032781\|Ga0314742_1068717	Not Available	610	Open in IMG/M
3300032781\|Ga0314742_1071705	Not Available	594	Open in IMG/M
3300032790\|Ga0314731_1025473	Not Available	982	Open in IMG/M
3300032821\|Ga0314719_1028940	Not Available	693	Open in IMG/M
3300032825\|Ga0314724_129166	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	525	Open in IMG/M
3300032844\|Ga0314743_1002885	Not Available	2832	Open in IMG/M
3300032970\|Ga0314716_120629	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	776	Open in IMG/M
3300033525\|Ga0314758_1211628	Not Available	523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	95.90%
Environmental	Environmental	4.10%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	95.90%
Terrestrial	Environmental → Terrestrial	4.10%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	79.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.74%
Unclassified	Host-Associated → Plants → Unclassified	5.74%
Soil	Environmental → Terrestrial → Soil	4.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.10%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	79.51%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	5.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.10%
Loam	Environmental → Terrestrial → Soil → Loam	2.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.64%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	79.51%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	5.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.64%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	72.13%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	7.38%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	5.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009975	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009989	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015270	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015301	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015309	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015329	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015337	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017421	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017694	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020023	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MG	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028051	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028054	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028055	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028142	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028150	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028248	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028256	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028473	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300032464	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032466	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032502	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032548	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032590	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_31MAY2016_LR3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032593	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032689	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032699	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032761	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032781	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032790	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032821	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_15MAY2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032825	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_05JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032844	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032970	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_15MAY2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033525	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070668_1005219781	3300005347	Switchgrass Rhizosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFLSRSGRNR*
Ga0070669_1014555132	3300005353	Switchgrass Rhizosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVSAIYIGYIVDMNFTCMLFFIKI*
Ga0070671_1018234531	3300005355	Switchgrass Rhizosphere	MALVDVDVTFDIMGSYMIRITCMLREIELMILVGVIYIGYICDMNFTCMLFFIRIW*
Ga0070705_1008484272	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MALVDVDVTFDIMGFYMIRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0070685_108905562	3300005466	Switchgrass Rhizosphere	MALVDVDVTFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0070686_1015904581	3300005544	Switchgrass Rhizosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGAIYIGYIVDMNFTCMLFFIKIW*
Ga0068859_1028551421	3300005617	Switchgrass Rhizosphere	MATFTKKSVDGDVAFDIMGSYMMRITYMLREIELMTLVGVIYIGYINDMNFSCILFFIRI
Ga0068860_1013660371	3300005843	Switchgrass Rhizosphere	MALVDVDVAFDIIDSYMMWITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0105249_135195181	3300009553	Switchgrass Rhizosphere	MALVDVDVAFDIIDFYMMWITCMSREIELMTLVGVIYIGYIVDMNFTCMLFFIKI*
Ga0105129_1087711	3300009975	Switchgrass Associated	MALVDIDVAFDIMGSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFLSRSGRNR*
Ga0105133_1015341	3300009981	Switchgrass Associated	MALVDIDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0105133_1234711	3300009981	Switchgrass Associated	MATFTKKSVDGDVAFDIMGSYMMRITYMLREIELMILVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0105131_1131212	3300009989	Switchgrass Associated	MVLVDVDVIFDIMGSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFLSRSGRNR*
Ga0105120_10256042	3300009992	Switchgrass Associated	MALVDVDVAFDIMDSYMMWITYMLREIELMTLVGAIYIGYIVDMNFTCMLFFIKIW*
Ga0105120_10483981	3300009992	Switchgrass Associated	MALVDVDVTFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKI*
Ga0105126_10090882	3300009994	Switchgrass Associated	MALVDVDVAFDIIDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKI*
Ga0134125_112165301	3300010371	Terrestrial Soil	MALVDIDVEFDIMGSYMMRITCMLRKIELMTLVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0134123_120675621	3300010403	Terrestrial Soil	MALVDVDVAFDIMGSYMMRITCILREIELMTLVAVIYIGYIDYMNFTCMFFFSIG*
Ga0163163_117415831	3300014325	Switchgrass Rhizosphere	MALVDVDVAFDIIDSYMMRITCMLREIELMTLVGAIYIGYIGDMNFTCMLFFIRIW*
Ga0157379_115242511	3300014968	Switchgrass Rhizosphere	MALVDVDVAFAIIDFYMMRITCILREIELMTLVGVIYTGYIIDMNFTCMLF
Ga0182183_10414391	3300015270	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMQITYMLREIELMTLVGVIYIDDMNF
Ga0182099_10496081	3300015278	Switchgrass Phyllosphere	MALVNVDVAFDIMSSYMMWITCMLREIELMTLVGDIYMGYIDDINFTCILFFI
Ga0182100_10202721	3300015280	Switchgrass Phyllosphere	MALVDVDVTFDIMSSYMMRITYMLREIELMTLVGVIYIGYIDDMNFTCILFFYQDPT*
Ga0182100_10360261	3300015280	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0182101_10444461	3300015284	Switchgrass Phyllosphere	MALVDVDVAFDIIDSYMMWITCMLREIELVTLGVIYIGYIVDMNFTCMLFFIKI*
Ga0182103_10339441	3300015293	Switchgrass Phyllosphere	MALVDVDVTFDIMGSYMIRITCMLREIELMTLVGVIYIGYIGDMNFTCMLFF
Ga0182103_10765901	3300015293	Switchgrass Phyllosphere	VPFDIMGFYMMRITYMLREIELMILVGVIYIGYIDDMNFTCILFFIRIQQKSIN*
Ga0182184_10066811	3300015301	Switchgrass Phyllosphere	MALVDIDVAFDIMGSYMMRITCMLREIELMTLVGVIYTGYIIDMNFTCMLFFIKIW*
Ga0182098_10359611	3300015309	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGAIYIGYIGDMNFYLHVIFYQDW*
Ga0182162_10447311	3300015310	Switchgrass Phyllosphere	MALVDIDVAFDIIGPYMMRITCMLKEIELMTFVGVIYIGYIVDMNFT
Ga0182162_10947491	3300015310	Switchgrass Phyllosphere	MALVDVDVAFDIMGSYMMRITCMLREIELMTLVGVIYIGYIDYMNFTCMFFSVLGRNR*
Ga0182182_10575071	3300015311	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFT
Ga0182168_10678861	3300015312	Switchgrass Phyllosphere	MVLVDVDVAFDIMDFYMMRITCMLREIELMTLVGAIYIGYIVNMNFT
Ga0182120_10503871	3300015315	Switchgrass Phyllosphere	MALVNVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIDYIVDMNFTCMLFFIKIG*
Ga0182120_11263191	3300015315	Switchgrass Phyllosphere	MALVDVDVTFDIMGFYMMRIICMLREIELMTLVGVIHIGYIDDMNFTCMLFLSE
Ga0182121_10654231	3300015316	Switchgrass Phyllosphere	MALVDVDVTFDIMDSYMMRITCMLREIELMTLVGVIYIDYIVDMNFNCMLFFIMIG*
Ga0182136_10427411	3300015317	Switchgrass Phyllosphere	MVLVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFT
Ga0182181_10611371	3300015318	Switchgrass Phyllosphere	MATFTQKSVAGDVAFDIMGSYMMWITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0182165_10819431	3300015320	Switchgrass Phyllosphere	MALVDVDVAFDIIDSYMMRITCMLRKIELMTLVGVIYIGYIVDMNFTCMLFF
Ga0182134_10547021	3300015324	Switchgrass Phyllosphere	MALVDVDVAFDIMGSYMMWITCILREIELMTLVGIIYISYIDYMNFTCMLFFIRIW*
Ga0182148_10131191	3300015325	Switchgrass Phyllosphere	MALVDVDVTFDIMDSYMMRITCMLREIELMILMGVIYIGYIDYMNFTCMFF*
Ga0182148_10756331	3300015325	Switchgrass Phyllosphere	MALVDVDVAFDIIDSYMMWITCMLREIELITLVGVIYIGYIVDMNFTCMLFFI
Ga0182148_10931101	3300015325	Switchgrass Phyllosphere	MALVDVNVAFDIMSSYMMRITCMLREIELMILVGVIYIGYIDYMNFTCMFFSVLGRNR*
Ga0182166_10528811	3300015326	Switchgrass Phyllosphere	MAIFTKEVDGKHKYMALVDVDVAFDIMDSYMMRITYMLREIELMTLVGAIYIGYIVDMNFTCMLFFIKIW*
Ga0182153_11077281	3300015328	Switchgrass Phyllosphere	MALVDVDVAFDIIDSYMMWITCMLREIELMTLVGVIYIGYIVDMNF
Ga0182135_10134761	3300015329	Switchgrass Phyllosphere	MALVDVDVTFDIMSSYMMRITCMLREIELMTLVGVIYIDYIGDMNFTCMLFFIRIW*
Ga0182152_10020921	3300015330	Switchgrass Phyllosphere	MALVDVDVAFDIMDFYMMRITCMLREIELMILVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0182152_10478602	3300015330	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGSIYIGYIVGMNFTCMLFFIKIW*
Ga0182152_11296651	3300015330	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIDYIVDMNF
Ga0182131_10271574	3300015331	Switchgrass Phyllosphere	AFDIMGSYMMRITCMLKEIELMTLVGVIYIDYIVDINFTCMLFFIKIW*
Ga0182131_10745571	3300015331	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMILVDVIYISYIGDINFTCMLFFIRIW*
Ga0182117_11254142	3300015332	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFLSR
Ga0182117_11447082	3300015332	Switchgrass Phyllosphere	MALVDVDVAFDIMGSYMMRITCILREIELMTLVGVIYIGYIDYMNFTCIFFSVLGRNR*
Ga0182147_10675701	3300015333	Switchgrass Phyllosphere	MALVDVDVTFDIMGSYMIRITCMLREIELMTLVGVTYIGYIGDMNFTCM
Ga0182151_10957962	3300015337	Switchgrass Phyllosphere	MALVDVDVTFDIMSFHMMRITCMLREIELMTLVGVIYIGYIVDMNF
Ga0182137_10077251	3300015338	Switchgrass Phyllosphere	MALVDIDVAFDIMGSYMMWIICMLRKIELMTLVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0182149_11233401	3300015339	Switchgrass Phyllosphere	MALVDVDVAFHIIDSYMMWITCMLREIELMTLVGVIYIGYIVDMNFTCMLFF
Ga0182149_11429051	3300015339	Switchgrass Phyllosphere	MALVNVDVAFDIMDSYMMRITCMLREIELMTLVGVICIGYIVDLNFTCMLFFIKIW*
Ga0182133_10710212	3300015340	Switchgrass Phyllosphere	MALVDVDVAFDIMGSYMMRITCMLREIELMTLVGAIYIGYIVDMNFTCMLFFIKIW*
Ga0182133_11740661	3300015340	Switchgrass Phyllosphere	MALVDVDVAFDIMGSYMMRITCMLREIELMTLMGVIYIGYIDYMNFTCMFFFSIGYESIN
Ga0182115_12178041	3300015348	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGIIYIGYIIDMNFTCMLFFIKIW*
Ga0182115_12615551	3300015348	Switchgrass Phyllosphere	MALVDVDVTFDIMGSYMIRITCMLREIELMTLVGVIYIGYIGDMN
Ga0182185_10527171	3300015349	Switchgrass Phyllosphere	MALVDVDVTFDIMGSYMIRITCMLREIELMTLVGVIYIGYIGDMNFT
Ga0182185_10906232	3300015349	Switchgrass Phyllosphere	MALVDVDVAFDILDSYMTRITCMLREIELMTLVGVIYIDYIVDMNFTCMLFFIRIW*
Ga0182185_11282421	3300015349	Switchgrass Phyllosphere	MALVDIDVAFDIMGSYMMRITCMLRKIELMTLVGVIYIGYIVDMNFTCMLFFIKIW*
Ga0182185_12298962	3300015349	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGAIYIGYIVDMNFTCM
Ga0182163_10023621	3300015350	Switchgrass Phyllosphere	MALVDVDVAFDIMGSYMMRITCMLREIELMTLVGVIYIGYIDYMNFTCIFLFS
Ga0182169_11069201	3300015352	Switchgrass Phyllosphere	MALVDIDVAFDIMGSYMMRITCMLRKIELMTLVGVIYIGYIVDMNFT
Ga0182169_13017781	3300015352	Switchgrass Phyllosphere	MVLVDVDVTFDIMGSYMIRISCMLREIELMTLVGVIYIGYIGDINFTC
Ga0182179_11845621	3300015353	Switchgrass Phyllosphere	MALVDIDVTFDIMGSYMMRITCMLREIELMTLVGVIHIGYIDDMNFTCMLFFIKIG*
Ga0182179_12290271	3300015353	Switchgrass Phyllosphere	MALVDIDVAFDITCMLREIELIILVGVVYIGYIVDMNFTCMLFFI
Ga0182167_10404921	3300015354	Switchgrass Phyllosphere	MALVGVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFI
Ga0182167_10547021	3300015354	Switchgrass Phyllosphere	MILVDGDVASDIVGSYMMRITCMLREIELMTSVGVIYIGYIDYMNFTCMFFSVLGRNR*
Ga0182167_11787201	3300015354	Switchgrass Phyllosphere	MALVDVDVAFAIIDFYMMRITCILREIELMTLVGVIYTGYIIDMNFTCMLFF
Ga0182167_12093591	3300015354	Switchgrass Phyllosphere	MALVDIDVAFDIMGSYMMRITYMLREIELMTLVGVIYIDYIVDMNFTCMLFFIKIG*
Ga0182167_12211681	3300015354	Switchgrass Phyllosphere	MVLVDVDVTFDIMSFYMMRIICMLREIELMTLVGVIHIGYIDDMNFTCILFFIRIW*
Ga0182199_10762851	3300017412	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGAIYIGYIVDMNFTCMLFFIKIW
Ga0182199_11629891	3300017412	Switchgrass Phyllosphere	MALVDVDVTFDIMGSYMIRITCMLREIELMTLVGAIYIGYIGDMN
Ga0182195_10852642	3300017414	Switchgrass Phyllosphere	MATFTNKSVDGDVAFDIMDSYMMRIIYMLREIELMTLVGVIYIGYIDDMNFTCILFLS
Ga0182213_11022312	3300017421	Switchgrass Phyllosphere	MALMDVDVAFDIMDFYMMRITCMLREIELMILVGVIHIGYIDYMNFTCMLFFIKIW
Ga0182201_10113652	3300017422	Switchgrass Phyllosphere	MALVDVDVAFDIMGSYMMWITCMLREIELMTLVGVIYIGYIDYMNFTCMFFFSVLGRNR
Ga0182201_10825361	3300017422	Switchgrass Phyllosphere	MALVDVDVAFDIIDSYMMWITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKI
Ga0182201_10970061	3300017422	Switchgrass Phyllosphere	VDVDVAFDIMSFYMMRITCMLREIELMTLVGVIYICYIDDMNFTCMLF
Ga0182215_10553081	3300017447	Switchgrass Phyllosphere	MALVDIDVTFDIMGSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFRVKCTVSH
Ga0182216_10232731	3300017693	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITYMLREIELMTLVGAIYIGYIVDMNFTCMLFFIKIW
Ga0182211_11487321	3300017694	Switchgrass Phyllosphere	MLAWQHSQKKSVDGDVAFDIMSSYMLREIELMTLVGVIYIGYIADMNFTCMLFFIKI
Ga0182211_11807101	3300017694	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIKLMTLVGVIYIGYIVDMNFTCMLFFIKIG
Ga0182178_10009161	3300020023	Switchgrass Phyllosphere	MALVNADVAFDIMDSYMMRITCMLREIELMILVGVIYIGYIVDMNFTCMLFFIKIW
Ga0207680_104896961	3300025903	Switchgrass Rhizosphere	MVLVDVDVAFDIMGSYMMRITCILREIELMILVGVIYICYIDYMNFTCMFF
Ga0207658_117893811	3300025986	Switchgrass Rhizosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKI
Ga0207641_115895671	3300026088	Switchgrass Rhizosphere	MALVDVDVAFDIMDSYMMQITCMLREIKLMTLVGVIYIGYIVDMNFTCMLFFIKI
Ga0207675_1007937332	3300026118	Switchgrass Rhizosphere	MALVDVDVAFDIMGSYMMRITCMLRKIELMTLVGVIYIGYIVDMNFTCMLFFIKIW
Ga0268344_10207031	3300028051	Phyllosphere	DGKYKLTALVDIDVAFDIIGSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW
Ga0268306_10174441	3300028054	Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFLSRSGRNR
Ga0268338_10271881	3300028055	Phyllosphere	KKSVDGDVAFDIMSSYMMRITYILREIELMTLVGVIYIGYIDDMNFTCILFFYQDPT
Ga0268347_10335471	3300028142	Phyllosphere	MALVDVDVAFDIMGSYMMRITCILREIELMTLVGVIYIGYIDYMNFTCMFFFQYWVEIDKLIEVT
Ga0268343_10148682	3300028150	Phyllosphere	MVLVDIDVAFDIIGSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW
Ga0268312_10053531	3300028248	Phyllosphere	MALVDVDVTFDIMGSYMIRITCMLREIELMTLVGAIYIGYIGDMNFTCMLFFIRIW
Ga0268304_10051542	3300028256	Phyllosphere	MALVDVDVTFDIMGSYMIRITCMLREIELMTLVGVIYIGYIGDMNFTCMLFFIRIW
Ga0268264_117644411	3300028381	Switchgrass Rhizosphere	MGLVDVDVTFDIMGSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFLSRSGRNR
Ga0268319_10019212	3300028473	Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFYQ
Ga0268319_10020251	3300028473	Phyllosphere	MDLVDVDVTFDIMGSYMVRITCMLREIELMTLVGAIYIGYIGDMNF
Ga0214492_10068442	3300032464	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW
Ga0214492_10071442	3300032464	Switchgrass Phyllosphere	MALVDIDVAFDIMGSYMMRITYMLREIKLITLVGVIYIDYIVDMNFTSMLFFIKIG
Ga0214503_11762161	3300032466	Switchgrass Phyllosphere	MALVDVDVTFDIMGSYMMRITCMLREIELMTLVGVIYIGYIGDMNFTCMLFFIRIW
Ga0214490_10390351	3300032502	Switchgrass Phyllosphere	DVAFDIMDSYMMRITCMLREIELMTLVDVIYIGYIVDMNFTCMLFFIRIW
Ga0214490_10907071	3300032502	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIRIW
Ga0214483_10459291	3300032548	Switchgrass Phyllosphere	MALVDVDVTFDIMGSYMMPITCMLREIELMTLVGVIYIGYIGDMNFTCMLFFIKI
Ga0214483_10811171	3300032548	Switchgrass Phyllosphere	MALVDVDVAFDIMNSYMMRITCMLREIELMTLVGAIYIGYIVDMNFTCMLF
Ga0214489_10144941	3300032590	Switchgrass Phyllosphere	MTLMDVDVAFDIMGSYMMRITCMLREIELMTLVGIIYIGYIDYMNFTCMFFFSIG
Ga0321338_10684572	3300032593	Switchgrass Phyllosphere	MTLVDVDVAFDIIGFYMMRITCMLREIELMTLVGVIYICYIDYKNFTCMLFFIKIW
Ga0214497_10432031	3300032689	Switchgrass Phyllosphere	MALVDVDVAFDIIGSYMMRITCMLREIELMTLVGVIYIGYIDYMNFTCMFFQY
Ga0214494_10171443	3300032699	Switchgrass Phyllosphere	MDVDVAFDIMGSYMMRITCMLREIELMTLVGVIYICYIGDTNFTCMLFLSGSSRNR
Ga0314733_10509361	3300032761	Switchgrass Phyllosphere	MATFTQKSVDGDVAFDIMGSYMMWITCMLREIELMTLVCVVYIAYIDGINFTCILFFIRI
Ga0314742_10687172	3300032781	Switchgrass Phyllosphere	MALVDVDVIFDIMGSYMMRITCMLKEIELIILVGVIYIGYIGDMNFTCMLFFIRIW
Ga0314742_10717051	3300032781	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLREIELITLVGVIYIGYIVYMNFT
Ga0314731_10254731	3300032790	Switchgrass Phyllosphere	MALVDVDVAFDIMDSYMMRITCMLRERELMTLVGVIYIGYIVDMNFTCMLFFIKI
Ga0314719_10289401	3300032821	Switchgrass Phyllosphere	MALVDVDVAFDIIDFYMMWITCMLREIELMTLVGVIYICYIGDTNFTCMLFLSGSSRNR
Ga0314724_1291661	3300032825	Switchgrass Phyllosphere	MALVDVDVAFDIMGSYMMRITCMLREIELMTLVGVIYIGYIGDMNFTCMLFFTRIY
Ga0314743_10028854	3300032844	Switchgrass Phyllosphere	MALVDVDVTFDIMGSYMIQITCMLREIELMTLVGVIYIGYIGDMNFT
Ga0314716_1206291	3300032970	Switchgrass Phyllosphere	ALMDVDVAFDIMDSYMMRITYMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW
Ga0314758_12116281	3300033525	Switchgrass Phyllosphere	MALVDVDVAFDIICSYMMRVTCMLREIELMTLVGVIYIGYIVDMNFTCMLFFIKIW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070783

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences