NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F070951

Metagenome / Metatranscriptome Family F070951

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070951
Family Type Metagenome / Metatranscriptome
Number of Sequences 122
Average Sequence Length 59 residues
Representative Sequence MSSEHISKTKRTSCAAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRTTLLPLLR
Number of Associated Samples 76
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 88.52 %
% of genes near scaffold ends (potentially truncated) 27.05 %
% of genes from short scaffolds (< 2000 bps) 43.44 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (86.885 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(38.525 % of family members)
Environment Ontology (ENVO) Unclassified
(33.607 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.098 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 48.86%    β-sheet: 0.00%    Coil/Unstructured: 51.14%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF08281Sigma70_r4_2 42.62
PF14417MEDS 6.56
PF16694Cytochrome_P460 4.10
PF08447PAS_3 4.10
PF00210Ferritin 3.28
PF13191AAA_16 2.46
PF13426PAS_9 2.46
PF02954HTH_8 2.46
PF00072Response_reg 1.64
PF13620CarboxypepD_reg 1.64
PF07494Reg_prop 1.64
PF00069Pkinase 1.64
PF13561adh_short_C2 0.82
PF00196GerE 0.82
PF13493DUF4118 0.82
PF00440TetR_N 0.82
PF03824NicO 0.82
PF05015HigB-like_toxin 0.82
PF02492cobW 0.82
PF13565HTH_32 0.82
PF03544TonB_C 0.82
PF00230MIP 0.82
PF13581HATPase_c_2 0.82
PF00005ABC_tran 0.82
PF08448PAS_4 0.82
PF00547Urease_gamma 0.82
PF07638Sigma70_ECF 0.82
PF07730HisKA_3 0.82
PF13188PAS_8 0.82
PF13495Phage_int_SAM_4 0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 122 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 6.56
COG3292Periplasmic ligand-binding sensor domainSignal transduction mechanisms [T] 1.64
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 0.82
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.82
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.82
COG3549Plasmid maintenance system killer proteinDefense mechanisms [V] 0.82
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.82
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.82
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.82
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.82


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.89 %
UnclassifiedrootN/A13.11 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002914|JGI25617J43924_10005906All Organisms → cellular organisms → Bacteria3757Open in IMG/M
3300002914|JGI25617J43924_10072999All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1253Open in IMG/M
3300002914|JGI25617J43924_10089411All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300005445|Ga0070708_100081362All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2932Open in IMG/M
3300005557|Ga0066704_10566754Not Available737Open in IMG/M
3300005559|Ga0066700_10430314All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300006871|Ga0075434_100145303All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2392Open in IMG/M
3300006903|Ga0075426_10146461All Organisms → cellular organisms → Bacteria → Acidobacteria1703Open in IMG/M
3300007258|Ga0099793_10004474All Organisms → cellular organisms → Bacteria4979Open in IMG/M
3300007265|Ga0099794_10358514Not Available759Open in IMG/M
3300009038|Ga0099829_10316763All Organisms → cellular organisms → Bacteria1281Open in IMG/M
3300009143|Ga0099792_10424306All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium818Open in IMG/M
3300011269|Ga0137392_10049591All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3153Open in IMG/M
3300011269|Ga0137392_10789570All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium784Open in IMG/M
3300012096|Ga0137389_10906996Not Available756Open in IMG/M
3300012189|Ga0137388_10664157Not Available968Open in IMG/M
3300012200|Ga0137382_10008929All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia5232Open in IMG/M
3300012202|Ga0137363_10025521All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia4021Open in IMG/M
3300012202|Ga0137363_10033839All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3554Open in IMG/M
3300012202|Ga0137363_11282828Not Available620Open in IMG/M
3300012203|Ga0137399_10099372All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2248Open in IMG/M
3300012203|Ga0137399_10273860All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → unclassified Holophagales → Holophagales bacterium1389Open in IMG/M
3300012203|Ga0137399_10294039All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1341Open in IMG/M
3300012207|Ga0137381_10068048All Organisms → cellular organisms → Bacteria2973Open in IMG/M
3300012211|Ga0137377_10932511All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium799Open in IMG/M
3300012351|Ga0137386_10216315All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300012361|Ga0137360_10169045All Organisms → cellular organisms → Bacteria1749Open in IMG/M
3300012362|Ga0137361_10665977Not Available952Open in IMG/M
3300012363|Ga0137390_10158339All Organisms → cellular organisms → Bacteria → Acidobacteria2251Open in IMG/M
3300012685|Ga0137397_10007670All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7508Open in IMG/M
3300012918|Ga0137396_10014897All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4867Open in IMG/M
3300012922|Ga0137394_10917288Not Available731Open in IMG/M
3300012923|Ga0137359_10039843All Organisms → cellular organisms → Bacteria4064Open in IMG/M
3300012923|Ga0137359_10455168All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300012925|Ga0137419_10524337All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300012925|Ga0137419_10895353All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium730Open in IMG/M
3300012927|Ga0137416_10654961Not Available919Open in IMG/M
3300015241|Ga0137418_10019272All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6304Open in IMG/M
3300015245|Ga0137409_10022367All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6203Open in IMG/M
3300020199|Ga0179592_10034092All Organisms → cellular organisms → Bacteria2299Open in IMG/M
3300020579|Ga0210407_10009665All Organisms → cellular organisms → Bacteria → Acidobacteria7207Open in IMG/M
3300020579|Ga0210407_10016119All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5547Open in IMG/M
3300020579|Ga0210407_10051629All Organisms → cellular organisms → Bacteria → Acidobacteria3071Open in IMG/M
3300020579|Ga0210407_10683519Not Available796Open in IMG/M
3300020580|Ga0210403_10036435All Organisms → cellular organisms → Bacteria → Acidobacteria3932Open in IMG/M
3300020580|Ga0210403_10042923All Organisms → cellular organisms → Bacteria → Acidobacteria3614Open in IMG/M
3300020580|Ga0210403_10056940All Organisms → cellular organisms → Bacteria3130Open in IMG/M
3300020580|Ga0210403_10070514All Organisms → cellular organisms → Bacteria → Acidobacteria2806Open in IMG/M
3300020581|Ga0210399_10013098All Organisms → cellular organisms → Bacteria → Acidobacteria6515Open in IMG/M
3300020581|Ga0210399_10013246All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6480Open in IMG/M
3300020581|Ga0210399_10054797All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S1903207Open in IMG/M
3300020581|Ga0210399_10210408All Organisms → cellular organisms → Bacteria1618Open in IMG/M
3300020581|Ga0210399_10247599Not Available1485Open in IMG/M
3300020581|Ga0210399_10333502All Organisms → cellular organisms → Bacteria → Acidobacteria1266Open in IMG/M
3300020581|Ga0210399_11259693Not Available584Open in IMG/M
3300020583|Ga0210401_10001723All Organisms → cellular organisms → Bacteria → Acidobacteria24977Open in IMG/M
3300020583|Ga0210401_10080435All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S1903067Open in IMG/M
3300020583|Ga0210401_10104203All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2665Open in IMG/M
3300021046|Ga0215015_10968026All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300021168|Ga0210406_10034893All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4512Open in IMG/M
3300021168|Ga0210406_10057578All Organisms → cellular organisms → Bacteria3380Open in IMG/M
3300021168|Ga0210406_10400646All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300021168|Ga0210406_11266501Not Available533Open in IMG/M
3300021170|Ga0210400_10019694All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5280Open in IMG/M
3300021171|Ga0210405_10002571All Organisms → cellular organisms → Bacteria18706Open in IMG/M
3300021171|Ga0210405_10014059Not Available6645Open in IMG/M
3300021171|Ga0210405_10028738All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4464Open in IMG/M
3300021171|Ga0210405_10214957All Organisms → cellular organisms → Bacteria1523Open in IMG/M
3300021178|Ga0210408_10281962All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1325Open in IMG/M
3300021178|Ga0210408_10498540All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300021180|Ga0210396_10009406All Organisms → cellular organisms → Bacteria9245Open in IMG/M
3300021180|Ga0210396_10103546All Organisms → cellular organisms → Bacteria2574Open in IMG/M
3300021181|Ga0210388_10143963All Organisms → cellular organisms → Bacteria2068Open in IMG/M
3300021403|Ga0210397_10201254All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300021404|Ga0210389_10056775All Organisms → cellular organisms → Bacteria3001Open in IMG/M
3300021404|Ga0210389_10100670All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2225Open in IMG/M
3300021406|Ga0210386_10141536All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2006Open in IMG/M
3300021406|Ga0210386_10152473All Organisms → cellular organisms → Bacteria1933Open in IMG/M
3300021432|Ga0210384_10001327All Organisms → cellular organisms → Bacteria34099Open in IMG/M
3300021432|Ga0210384_10019053All Organisms → cellular organisms → Bacteria6658Open in IMG/M
3300021478|Ga0210402_10010895All Organisms → cellular organisms → Bacteria → Acidobacteria7848Open in IMG/M
3300021478|Ga0210402_10143151All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2174Open in IMG/M
3300021479|Ga0210410_10076973All Organisms → cellular organisms → Bacteria → Acidobacteria2927Open in IMG/M
3300021559|Ga0210409_10324597All Organisms → cellular organisms → Bacteria1385Open in IMG/M
3300024331|Ga0247668_1054997Not Available807Open in IMG/M
3300025910|Ga0207684_10001285All Organisms → cellular organisms → Bacteria27685Open in IMG/M
3300025915|Ga0207693_10101898All Organisms → cellular organisms → Bacteria2251Open in IMG/M
3300025929|Ga0207664_11660522Not Available561Open in IMG/M
3300025939|Ga0207665_10289618All Organisms → cellular organisms → Bacteria1221Open in IMG/M
3300025939|Ga0207665_10452681All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300026304|Ga0209240_1004974All Organisms → cellular organisms → Bacteria5019Open in IMG/M
3300026341|Ga0257151_1018154All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium736Open in IMG/M
3300026551|Ga0209648_10001386All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae19520Open in IMG/M
3300026551|Ga0209648_10025671All Organisms → cellular organisms → Bacteria5151Open in IMG/M
3300026551|Ga0209648_10039990All Organisms → cellular organisms → Bacteria4059Open in IMG/M
3300026998|Ga0208369_1000105All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3684Open in IMG/M
3300026999|Ga0207949_1000015All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5989Open in IMG/M
3300027071|Ga0209214_1000036All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5344Open in IMG/M
3300027381|Ga0208983_1009759All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1815Open in IMG/M
3300027576|Ga0209003_1009921All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1412Open in IMG/M
3300027643|Ga0209076_1031318All Organisms → cellular organisms → Bacteria1481Open in IMG/M
3300027748|Ga0209689_1182352All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300027862|Ga0209701_10064722All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2323Open in IMG/M
3300027903|Ga0209488_10201948All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1497Open in IMG/M
3300028536|Ga0137415_10004238All Organisms → cellular organisms → Bacteria14195Open in IMG/M
3300028536|Ga0137415_10030185All Organisms → cellular organisms → Bacteria → Acidobacteria5338Open in IMG/M
3300029636|Ga0222749_10123296All Organisms → cellular organisms → Bacteria1239Open in IMG/M
3300029636|Ga0222749_10183464All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1037Open in IMG/M
3300031708|Ga0310686_105546365All Organisms → cellular organisms → Bacteria1566Open in IMG/M
3300031708|Ga0310686_106367021All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3827Open in IMG/M
3300031753|Ga0307477_10008843All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6954Open in IMG/M
3300031753|Ga0307477_10069349All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2435Open in IMG/M
3300031754|Ga0307475_10003325All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae9754Open in IMG/M
3300031823|Ga0307478_10027713All Organisms → cellular organisms → Bacteria4055Open in IMG/M
3300031823|Ga0307478_10131318All Organisms → cellular organisms → Bacteria1973Open in IMG/M
3300031962|Ga0307479_10113275All Organisms → cellular organisms → Bacteria2640Open in IMG/M
3300031962|Ga0307479_10172557All Organisms → cellular organisms → Bacteria → Acidobacteria2125Open in IMG/M
3300032180|Ga0307471_100094046Not Available2693Open in IMG/M
3300032180|Ga0307471_100325611All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1636Open in IMG/M
3300032180|Ga0307471_100516585All Organisms → cellular organisms → Bacteria1344Open in IMG/M
3300032205|Ga0307472_100097582All Organisms → cellular organisms → Bacteria2011Open in IMG/M
3300032261|Ga0306920_100244023All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2680Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil38.52%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil30.33%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil9.02%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.74%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.10%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.46%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.82%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.82%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026341Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026998Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)EnvironmentalOpen in IMG/M
3300026999Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)EnvironmentalOpen in IMG/M
3300027071Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027576Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25617J43924_1000590623300002914Grasslands SoilMSTEYIFKATKASCAAPSTRRSVQFLPALYIHALMLVILVISSRNVFTTAIRNVLLVLLR
JGI25617J43924_1007299923300002914Grasslands SoilMSSEHISKTKRASCAAPSTQRSVQLLAALYIHALALVILVVFSRNAFSTAIRTTLLALLR
JGI25617J43924_1008941123300002914Grasslands SoilMSAEHVSKTNRISCVAPSTRGSVQFLAVLYIHALALVILVVFSKNVFSTTIRSVLLPLV
Ga0070708_10008136223300005445Corn, Switchgrass And Miscanthus RhizosphereMNSEHISKAKTMSCAAPSTRRSVQFVAALYIHALALVILVVFSRNVFSTTIRTILLALLR
Ga0066704_1056675413300005557SoilMSSEHISKTKRMSCVAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRT
Ga0066700_1043031423300005559SoilSMSAEHVSKTKRISCVAPSTRGSVQFLAVLYIHALALVILVVFSRNVFSTTIRSVLLPLVR*
Ga0075434_10014530323300006871Populus RhizosphereMSSKHVSEMTRISCAAPSTRRSVQFLAQLYIHALALVILVVFSRNVFSTAIRTTLLALLR
Ga0075426_1014646123300006903Populus RhizosphereMSSEHISKTKRTSCAAPSTRRSVQFLAAFYIHALALVILVVFSRNVLSTAIRTTLLALLR
Ga0099793_1000447433300007258Vadose Zone SoilMSSEHISKTKRISCAASSTRGSVQFLVALYIHALALVILVVFSRNVFSTTIRTTLLPLLR
Ga0099794_1035851423300007265Vadose Zone SoilMSSEHVSEMKRVSCAAPSTGRWVQYITALYIHALALVILVVFSRNVFSTTIRTT
Ga0099829_1031676323300009038Vadose Zone SoilMSTEYIFRTNKASCPAPSTRRSVQFLAALYIHAVMLVILVIFSRNVFSTAIRNVLLPLLR
Ga0099792_1042430623300009143Vadose Zone SoilSMSPEYVSEKKRGSCAAPSTRRSVQYLTALYIHALALVILVVFSRNVLSTTIRTTLLAVLR*
Ga0137392_1004959113300011269Vadose Zone SoilMSSEQISKTKRISCVAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRTTLLPLLR
Ga0137392_1078957023300011269Vadose Zone SoilMSSEHISKTKRISCAAPSTRGSVQFLVALYIHALALVILVVFSRNVFSTTIR
Ga0137389_1090699623300012096Vadose Zone SoilMSSEHISKTKRISCAPPSRRRSVQFLGAVYIHALALVILVVFSRNVFST
Ga0137388_1066415713300012189Vadose Zone SoilMSTEYIFRTNKASCPAPSTRRSVQFLAALYIHAVMLVILVIFSRNVFSTA
Ga0137382_1000892933300012200Vadose Zone SoilMSSEHISKTKRISCAPPSTRRSVQFLAAFYIHALALVILVVFSRNMFSTAIRTVFLALLR
Ga0137363_1002552123300012202Vadose Zone SoilMSAEHVSKTKRISCVAPSTRGSVQFLAVLYIHALALVILVVFSKNVFSTTIRSVLLPLVR
Ga0137363_1003383933300012202Vadose Zone SoilMSSEHVSEMKRVSCAASSTRRSVQFLVALYSHALALVSLAVFSRNVFSTVIRTAFLALLR
Ga0137363_1128282813300012202Vadose Zone SoilKTKRASCAAPSTQRSVQLLAALYIHAFALVILVVFSRNAFSTAIRTTLLALLR*
Ga0137399_1009937233300012203Vadose Zone SoilMSSEHISKTKRTSCAAPSTRGSVQFIVALYIHALALVILVVFSRNVFSTTIRTTLLPLLR
Ga0137399_1027386023300012203Vadose Zone SoilMSSECVSEMKRVSCAAPLTRRSVRFLAQLYIHAFALVILVVFSRNVFSTTIRTTLLTLLR
Ga0137399_1029403913300012203Vadose Zone SoilVKDAGGSMSSEHVSEMKRVSCAAPSTRRSVQFLTALYIHALALVILVVFSRNVLSTTIRTTLLAVLR*
Ga0137381_1006804823300012207Vadose Zone SoilMSPEYVSEKKRGSCAAPSTRGSVQFLAVLYIHALALVILVVFSRNVFSTTIRSVLLPLVR
Ga0137377_1093251113300012211Vadose Zone SoilMSSEHVSEMKRVSCAAPSTRRSVQYLTALYIHALALVILVVFSRNVFSTTIRTTLLAVLR
Ga0137386_1021631513300012351Vadose Zone SoilMSAEHVSKTKRISCVAPSTRGSVQFLAVLYIHALALVILVVFSRNVFSTTIR
Ga0137360_1016904543300012361Vadose Zone SoilMSSEHISKTKRISCVAPSTQHSVQFLAALYIHALVLVILMVSSRNVFSTAIRATLLPLLR
Ga0137361_1066597723300012362Vadose Zone SoilMSSEHVSEMKRVSCAAPSTRRSVQFLTALYIHALALVILVVFSRNVFSTTIRTTLLAVLR
Ga0137390_1015833913300012363Vadose Zone SoilMSSEHISKTKRTSCAAPSTRGSVQFLVALYIHALALVILVVFSRNVFSTTIRTTLLPLLR
Ga0137397_1000767043300012685Vadose Zone SoilMSAEHVSKTKRISCVAPSTRGSVQFLAVLYIHAFALVILVVFSRNVFSTTIRSVLLPLVR
Ga0137396_1001489753300012918Vadose Zone SoilMSSEHISKTKRASCAAPSTQRSVQLLGALYIHALALVILVVFSRNAFSTAIRTTLLALLR
Ga0137394_1091728823300012922Vadose Zone SoilMSPEHVSEMKRVSCAAPSTRRSVQFLTALYIHALALVILAVFSRNVFSTVIRTAFLALLR
Ga0137359_1003984323300012923Vadose Zone SoilMSSEHISKTKRASCAAPSTQRSVQLLAALYIHAFALVILVVFSRNAFSTAIRTTLLALLR
Ga0137359_1045516813300012923Vadose Zone SoilMSAEHVSKTNRISCVAPSTRGSVQFLAVLYIHALALVILVVFSRNVFSTTIRSVLLPLVR
Ga0137419_1052433713300012925Vadose Zone SoilVKDARGSMSPEYVSEKKRGSCAAPSTRRSVQFLTALYIHALALVILVVFSRNVFSTTIRTTLLTLLR*
Ga0137419_1089535323300012925Vadose Zone SoilVKDAGGSMSSEHVSEMKRVSCAAPSTRRSVQYLTALYIHALALVILVVFSRNVFSTTIRTTLLAVLR*
Ga0137416_1065496123300012927Vadose Zone SoilMSSEHVSEMKRVSCAAPSTRRSVQFLTALYLHALALVILVVFSRNVLSTTIRTTLLAVLR
Ga0137418_1001927273300015241Vadose Zone SoilSCAAPSTQRSVQLLAALYIHALALVILVVFSRNAFSTAIRTTLLALLR*
Ga0137409_1002236773300015245Vadose Zone SoilMSPEYVSEKKRGSCAAPSTRRSVQFLTALYIHALALVILVVFSRNVFSTTIRTTLLAVLR
Ga0179592_1003409233300020199Vadose Zone SoilMSAEHVSKTKRISCVAPSTRGSVQFLAVLYIHALALVILVVFSRNVFSTTIRSVLLPLVR
Ga0210407_1000966563300020579SoilMSSEHISKTKPTSCAAPSTRRSVQFLAALYIHALTLVILVVFSRNVFATAIRTTLLPLLR
Ga0210407_1001611923300020579SoilMSSEHISKTKRTSCAAPSTRRSVQFLAAFYIHALALVVLVVFSRNVLSTAIRATLLALLR
Ga0210407_1005162923300020579SoilMSSEHISKTKRMSCVAPSTRVSVQFLAALYIHALALAILVVFSRNVFSTAIRTTLLRLLL
Ga0210407_1068351923300020579SoilRIMSSEYPSRAKRIFCAAPSTRRSVQFLVAAYIHALMLVILVIFSRNVFSTVIRTALSPLLR
Ga0210403_1003643523300020580SoilMSSEHISKTKPTSCAAPSTRRSVQFLAALYIHALTLVILVVFSRNVFSTAIRTTFLPLLR
Ga0210403_1004292323300020580SoilMSSEHISETKRVSCPAPSTRRSVQFLVTLYIHALALAILVVFSRNVFSTAIRTALLPLLR
Ga0210403_1005694053300020580SoilMSSERISKTKRISYAPPSTRRSVQFLAGLYIHALALVILVVFSRNVFSTAIRTTLLALLR
Ga0210403_1007051423300020580SoilMNSEHISKTKRTSCAAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRTTLLPLLR
Ga0210399_1001309833300020581SoilMSSEYPSRAKTICCAAPSTRRSVQFLVAAYIHALMLVILVIFSRNVFSTAIRTALSPSLR
Ga0210399_1001324663300020581SoilMSSEHISKTKRVSCPAPSTRRSVQFLVTLYIHALALAILVVFSRNVFSTAIRTALLPLLR
Ga0210399_1005479723300020581SoilMSSEHISKMKRTSCAAPSTRRSVRFLAALYIHALALVILVVFSRNVFSTAIRTTFLPLLR
Ga0210399_1021040813300020581SoilMSSEHISKTKRMSCVARSTRVSVQFLAALYIHALALAILVVFSRNVFSTAIRT
Ga0210399_1024759933300020581SoilMSSEDMSETKGTSCAAPSTRRAVQFLAGLYIHALAVVILVVFSRNVFSTAIRTALSPLLR
Ga0210399_1033350213300020581SoilVKDARGSMSSEHISETKRTSCAAPSTRRSVQFLAAFYIHALALVILVVFSRNVLSTMIRTTLLALLR
Ga0210399_1125969323300020581SoilMSSEHISKTKRMSCVAPSTRVSVQFLAALYIHALALAILVVFSRNVFSTAIRS
Ga0210401_1000172353300020583SoilMSSEHISKTKRVSCVAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRNTLLPLLR
Ga0210401_1008043523300020583SoilMSSEHISKTNPTSCAAPSTRRSVQFLAALYIHALTLVILVVFSRNVFATAIRTTLLPLLR
Ga0210401_1010420333300020583SoilMSSEHISKTKRTSCGAPSTRRSVQLLVALYIHALALVILVVFSRNVFSTAIRATLLPLLR
Ga0215015_1096802623300021046SoilMSTEYIFRMNKASCPAPSTRRSVQFLAALYIHAVMLVILVIVSRNVFFAAIRNVLLPLLR
Ga0210406_1003489333300021168SoilMSSEDMSKTKRTSCAAPSTRREVQFLAGLYIHALALVILVVFSRNMFSTAIRTALGPLIR
Ga0210406_1005757853300021168SoilMSSERNSKTKRISYAPPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRTTLLALLR
Ga0210406_1040064613300021168SoilMSSEHISKTKPTSCAAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRTTLLPL
Ga0210406_1126650113300021168SoilMSSEHISKPKRTSCAGPSTRRSVQFLAALYIHALALAILVVFSRNVFSTAIRTTLLRL
Ga0210400_1001969463300021170SoilMSSEHISKTKRTSCAAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRTTLLPLLR
Ga0210405_1000257123300021171SoilMSSEYPFRAKTIVCAAPSTRRSVQFLVAAYIHALMLVILVIFSRNVFSTAIRTALSPLLR
Ga0210405_1001405933300021171SoilMSSEHVSKTKRTSCAAPSTRRSVQFLAAFYIHELALVILVVFSRNVFSTAIRTTLLALLR
Ga0210405_1002873823300021171SoilMSSERISKTKTISCAPPSTRRSVQFLAALYIHALVLAILVVFSRNVFSTTIRTMLSPLLR
Ga0210405_1021495733300021171SoilMSSEHISKAKRSSCAPPSTRRSVQFLVALYIHALALVILVLCSRNVFSTAIRTTLLP
Ga0210408_1028196233300021178SoilYIFETHKASGTAPLTRRSVQFLAALYIHAFMLVILVISSRNVFSTAIRNVLLALLR
Ga0210408_1049854013300021178SoilMSSEDMSKTKRTSCAAPSTRRAVQFLAGLYIHALALVILVVFSRNMFSTAIRTALGPLIR
Ga0210396_1000940623300021180SoilMSSEYPSRAKTIFCAAPSTRRSVQFLVAVYIHGLMLVILVIFSRNVFSTAIRTALSPLLR
Ga0210396_1010354643300021180SoilMSSEYPSRAKTIVCAAPSTRRSVQFLVAAYIHALMLVILVIFSRNVFSTAIRTALSPLLR
Ga0210388_1014396313300021181SoilMISEYISKTKRTSCAAPSTRRSVQFLAALYIHALALVVLVVFSRNVFSTTIR
Ga0210397_1020125413300021403SoilMSAEYPSRAKTIVCAAPSTRRSVQFLVAAYIHALTLAILVIFSRNLFST
Ga0210389_1005677553300021404SoilMNSEHISKTKRTSCAAPSTGRSVQFLAALYIHALALVILVVFSRNVFSTTIRTMLLALLR
Ga0210389_1010067023300021404SoilMNSEHISKTKRTSCAAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTTIRATLLALLR
Ga0210386_1014153623300021406SoilMSSERISKTKRISYAPPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRTTLLALLR
Ga0210386_1015247343300021406SoilMNSEHISKTKRTSCAAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRT
Ga0210384_1000132713300021432SoilMSSEHISETKRFSCPAPSTRRSVQFLVTLYIHALALAMLVVFSRNVFSTAIRTALLPLLR
Ga0210384_10019053113300021432SoilMSSEYPSRAKTICCAAPSTRRSVQFLVAAYIHALMLVILVIFSRNVFSTAIRTALSPLLR
Ga0210402_1001089553300021478SoilMSSEYPSRAKTICCAAPSARRSVQFLVAAYIHALMLVILVIFSRNVFSTAIRTALSPSLR
Ga0210402_1014315133300021478SoilMSSEHISKTKRTSCGAPSTRRSVQFLAALYIHALTLLILVVFSRNVFSTAVRTTLLPLLR
Ga0210410_1007697333300021479SoilMSSEHISKTKRMSCVAPSTRLSVQFLAALYIHALALAILVVFSRNVFSTGIRTTL
Ga0210409_1032459733300021559SoilMSSEDMSKTKRTSCAARSTRRAVQILAGLYIHALALVILVVFSRNMFSTAIRTALGPLIR
Ga0247668_105499723300024331SoilGSMSSKHVSEMTRISCAAPSTRRSVQFLAQLYIHALALVILVVFSRNVFSTAIRTTLLALLR
Ga0207684_10001285253300025910Corn, Switchgrass And Miscanthus RhizosphereMSSEHISKTKRTSCAAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRTVLLPLIR
Ga0207693_1010189823300025915Corn, Switchgrass And Miscanthus RhizosphereMSSEHISKTKSTSCAPPSTRRSVHFLAQLYIHALVLVILMVFSRNVFSTTIRSVLLLLLR
Ga0207664_1166052213300025929Agricultural SoilMSWLRFRYVSERKRIASPAPSTRRSVQFLAALYIHTLLLVILLVFSRNMFSTAIRSTL
Ga0207665_1028961813300025939Corn, Switchgrass And Miscanthus RhizosphereMSSEDMSKTKRTSCGAPSTRRAVQFLAGLYIHALALVILVVFSRNMFSTAIRTALGP
Ga0207665_1045268113300025939Corn, Switchgrass And Miscanthus RhizosphereMSSEDMSETKRTSCAAPSTRRAVQLLAGLYIHALALVILVVFSRNMFSTAIRTAL
Ga0209240_100497493300026304Grasslands SoilMSSEHISKTKRISCVAPSTRRSAQFLAALYIHALVLVILVVFSRNVFSTAIRTTLLPLLR
Ga0257151_101815423300026341SoilMSSEQVSEMKRVSCAAPSTRRSVQYLTALYIHALALVILVVFSRNVFSTTIRTTLLAVLR
Ga0209648_1000138673300026551Grasslands SoilMSAEHVSKTNRISCVAPSTRGSVQFLAVLYIHALALVILVVFSKNVFSTTIRSVLLPLVR
Ga0209648_1002567113300026551Grasslands SoilMSSEHISKTKRISCVAPSTQRSVQFLAALYIHALVLVILMVSSRNVFSTAIRATLLPLLR
Ga0209648_1003999013300026551Grasslands SoilMSSEHISKTKRISCALPSTRRSVQFLAALYIHALALVSLMVFSRNVFSTAIRATLLPLLR
Ga0208369_100010533300026998Forest SoilMSSEHISKTKRTSCAAPSTRRSVQFLAAFYIHALALVVLVVFSRNVLSTAIRATLLALVR
Ga0207949_100001533300026999Forest SoilMSSEHISKTKRTSCAAPSTRRSVQFLAAFYIHALALVILVVFSRSVLSTAIRTTLLALLR
Ga0209214_100003613300027071Forest SoilMNSEHISKAQTMSCAAPSTRRSVQFVAALYIHTLALVILVVFSRNVFSTTIRTILLALLR
Ga0208983_100975923300027381Forest SoilMSSEQVSEMKRVSCAAPSTRRSVQFLTALYIHALALVILVVFSRNVFSTTIRSTLLALLR
Ga0209003_100992113300027576Forest SoilMSSEHISEAKRISCVARSTRRPAQFLVTLYIHALALVILVVFSRNVFSTTIRTTLLPLLR
Ga0209076_103131833300027643Vadose Zone SoilMSSEHISKTKRASCAAPSTQRSVQLLAALYIHALALVILVVFSRNAFSTAIRTT
Ga0209689_118235213300027748SoilSMSAEHVSKTKRISCVAPSTRGSVQFLAVLYIHALALVILVVFSRNVFSTTIRSVLLPLV
Ga0209701_1006472253300027862Vadose Zone SoilMSSEQISKTKRISCVAPSTRRSVQFLAALYIHGLVLAILVVFSRNVFSTAIRTTLLPLLR
Ga0209488_1020194813300027903Vadose Zone SoilARGSMSPEYVSEKKRGSCAAPSTRRSVQYLTALYIHALALVILVVFSRNVLSTTIRTTLLAVLR
Ga0137415_1000423823300028536Vadose Zone SoilMSSEHVSEMKRVSCAAPSTRRSVQFLTALYIHALALVILVVFSRNVLSTTIRTTLLAVLR
Ga0137415_1003018523300028536Vadose Zone SoilMSSEHISKTKRTSCAAPSTRGSVQFLAALYSHALALVILVVFSRNVFSTTIRTTLLPLLR
Ga0222749_1012329623300029636SoilMSSEYPFRAKTIVCAAPSTRRSVQFLVAAYIHALMLVILVIFSRNVFSTAIR
Ga0222749_1018346423300029636SoilMSSEHISETKRFSCPAPSTRRSVQFLVTLYIHALALAILVVFSRNVFSTAIRTALLPLLR
Ga0310686_10554636533300031708SoilMSSEHISKTKRTSCAAPSTRRSVQFLAAFYIHALALVILVVFSRNVLSTTIRTTLLALLR
Ga0310686_10636702123300031708SoilMSSEHISKTNRTSCAARSTRRSVHFLAVLYIHAFAFVILVVYSRNVFSTAIRTTLLPLLR
Ga0307477_1000884343300031753Hardwood Forest SoilMSSEHISKTKRMSCVAPSTRVSVQFLAALYIHALALAILVVFSRNVFSTAIRTTLLPLLR
Ga0307477_1006934913300031753Hardwood Forest SoilMSSECISKMKRVSSATPSERRSVQFLAALYIHALALVILVVFSRNVFSTAIRTTLLPLLR
Ga0307475_1000332563300031754Hardwood Forest SoilMSSEHISKKNGISCVPPSRRRSVQFLAALYIHALVLTILMVFSRNVFSTAIRTTLLPLLR
Ga0307478_1002771343300031823Hardwood Forest SoilMSTEHISKTKRISSAAPSTRPSVQFLAALYIHALVLAILVVFSRNVFSRAIRTVILPLLR
Ga0307478_1013131823300031823Hardwood Forest SoilMSTEYIFKATKASCAAPSTRRSVQFLTALYIHVLMLAILVISSRNVFSTAIRNVLLALLR
Ga0307479_1011327513300031962Hardwood Forest SoilMNSEHISKTKRTSCAAPSTRRSVQVLVALYIHASALVILVVFSRNVFSTAIRTTLLPLLR
Ga0307479_1017255723300031962Hardwood Forest SoilMNSEHVSKTKRISSAAPSTRRSVQFLAALYIHALVLVILVVFSRNVLSTAIRTVILPLLR
Ga0307471_10009404643300032180Hardwood Forest SoilMSSEYISKTKRTSREAPSTRGSVQLLVALYIHALALVILVVFSRNVFSTTIRTTLLPLLP
Ga0307471_10032561123300032180Hardwood Forest SoilMSSEHISKAKRMSCVAPSTRRSVQFLAALYIHVLALVILVVFSRNVFSTAIRSTLLTLLR
Ga0307471_10051658523300032180Hardwood Forest SoilMSLERISKTNTTSCAAPSTRRSVQFLAALYIHALALVILVVFSRNLFSTTIRTMLLALVR
Ga0307472_10009758223300032205Hardwood Forest SoilMSSEDMSKTKRTSCGAPSTRRAVQFLAGLYIHALALVILVVFSRNMFSTAIRTALGPLIR
Ga0306920_10024402323300032261SoilMNSEHIHISKTKRKSCVAPSTRRSVQFLAALYIHALALVILVVFSRNVFSTAIRTTLLPLLR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.