Metagenome / Metatranscriptome Family F071008

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071008
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	55 residues
Representative Sequence	KEFYQMFHWFNEAGFKADIASLRRRYPEVHLQTLEEWLRNEGWHKRARRVVPPKG
Number of Associated Samples	80
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.76 %
% of genes near scaffold ends (potentially truncated)	85.25 %
% of genes from short scaffolds (< 2000 bps)	86.07 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.984 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.951 % of family members)
Environment Ontology (ENVO)	Unclassified (38.525 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.295 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.76% β-sheet: 0.00% Coil/Unstructured: 60.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01047	MarR	4.92
PF06736	TMEM175	3.28
PF13810	DUF4185	2.46
PF02896	PEP-utilizers_C	2.46
PF12840	HTH_20	2.46
PF00571	CBS	1.64
PF00903	Glyoxalase	1.64
PF07992	Pyr_redox_2	1.64
PF00403	HMA	1.64
PF07883	Cupin_2	1.64
PF14321	DUF4382	0.82
PF00496	SBP_bac_5	0.82
PF05368	NmrA	0.82
PF01436	NHL	0.82
PF03551	PadR	0.82
PF07228	SpoIIE	0.82
PF00107	ADH_zinc_N	0.82
PF02481	DNA_processg_A	0.82
PF16576	HlyD_D23	0.82
PF02397	Bac_transf	0.82
PF01326	PPDK_N	0.82
PF00535	Glycos_transf_2	0.82
PF05199	GMC_oxred_C	0.82
PF01361	Tautomerase	0.82
PF08668	HDOD	0.82
PF07969	Amidohydro_3	0.82
PF13414	TPR_11	0.82
PF10048	DUF2282	0.82
PF03358	FMN_red	0.82
PF14534	DUF4440	0.82
PF05114	DUF692	0.82
PF12681	Glyoxalase_2	0.82
PF00462	Glutaredoxin	0.82
PF02687	FtsX	0.82
PF02518	HATPase_c	0.82
PF02746	MR_MLE_N	0.82
PF13761	DUF4166	0.82
PF08240	ADH_N	0.82
PF00723	Glyco_hydro_15	0.82
PF03466	LysR_substrate	0.82
PF13407	Peripla_BP_4	0.82
PF12833	HTH_18	0.82
PF03625	DUF302	0.82
PF16925	TetR_C_13	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG3548	Uncharacterized membrane protein	Function unknown [S]	3.28
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.64
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	1.64
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	1.64
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.64
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	0.82
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.82
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.82
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.82
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.82
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.82
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.82
COG3220	Uncharacterized conserved protein, UPF0276 family	Function unknown [S]	0.82
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.82
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.98 %
Unclassified	root	N/A	9.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.98 %
Unclassified	root	N/A	9.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.98 %
Unclassified	root	N/A	9.02 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.11 %
Unclassified	root	N/A	9.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.64 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	9.84 %
Unclassified	root	N/A	9.02 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.46 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.64 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	9.84 %
Unclassified	root	N/A	9.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.46 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.46 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.64 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.84 %
Unclassified	root	N/A	9.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.64 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.82 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.82 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.82 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.84 %
Unclassified	root	N/A	9.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.38 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	2.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.64 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.82 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.82 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.84 %
Unclassified	root	N/A	9.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.38 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	2.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.64 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.82 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.82 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.84 %
Unclassified	root	N/A	9.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.38 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	2.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.64 %
Afipia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	0.82 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.82 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.84 %
Unclassified	root	N/A	9.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.38 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	2.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.64 %
unclassified Bacteroides	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides	0.82 %
Afipia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	0.82 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	9.84 %
Unclassified	root	N/A	9.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.38 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	2.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.64 %
Bacteroides sp. SM23_62	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides → Bacteroides sp. SM23_62	0.82 %
Afipia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	0.82 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101077016	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101132078	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300000955\|JGI1027J12803_101272440	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300004104\|Ga0058891_1363373	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005332\|Ga0066388_101785754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1093	Open in IMG/M
3300005332\|Ga0066388_102050807	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300005332\|Ga0066388_107175196	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005332\|Ga0066388_107353662	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005445\|Ga0070708_101411901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300005526\|Ga0073909_10552584	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005537\|Ga0070730_10991288	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005542\|Ga0070732_10271299	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300005575\|Ga0066702_10480871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	758	Open in IMG/M
3300005713\|Ga0066905_100200575	All Organisms → cellular organisms → Bacteria → Proteobacteria	1491	Open in IMG/M
3300005713\|Ga0066905_100613792	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300005764\|Ga0066903_100584936	All Organisms → cellular organisms → Bacteria → Proteobacteria	1928	Open in IMG/M
3300005764\|Ga0066903_101682383	All Organisms → cellular organisms → Bacteria → Proteobacteria	1207	Open in IMG/M
3300005764\|Ga0066903_104958101	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005764\|Ga0066903_106792182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	595	Open in IMG/M
3300005764\|Ga0066903_107176962	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300006028\|Ga0070717_11036728	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300006028\|Ga0070717_11340841	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300006804\|Ga0079221_10134800	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300009088\|Ga0099830_11558914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	550	Open in IMG/M
3300009089\|Ga0099828_10057177	All Organisms → cellular organisms → Bacteria	3261	Open in IMG/M
3300009089\|Ga0099828_10344275	All Organisms → cellular organisms → Bacteria → Proteobacteria	1343	Open in IMG/M
3300009089\|Ga0099828_11833278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300009090\|Ga0099827_10276987	All Organisms → cellular organisms → Bacteria → Acidobacteria	1415	Open in IMG/M
3300009137\|Ga0066709_102715850	Not Available	660	Open in IMG/M
3300009143\|Ga0099792_10122545	Not Available	1398	Open in IMG/M
3300009156\|Ga0111538_13833673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	520	Open in IMG/M
3300009792\|Ga0126374_10080962	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300009792\|Ga0126374_10306076	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300009792\|Ga0126374_11020873	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010043\|Ga0126380_10914671	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300010046\|Ga0126384_10007256	All Organisms → cellular organisms → Bacteria	6801	Open in IMG/M
3300010046\|Ga0126384_10386774	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300010046\|Ga0126384_11723348	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300010048\|Ga0126373_10228552	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300010359\|Ga0126376_12335068	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300010360\|Ga0126372_11140073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	801	Open in IMG/M
3300010360\|Ga0126372_11541420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	702	Open in IMG/M
3300010360\|Ga0126372_11597782	Not Available	691	Open in IMG/M
3300010361\|Ga0126378_10092178	All Organisms → cellular organisms → Bacteria	2967	Open in IMG/M
3300010361\|Ga0126378_12502712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	589	Open in IMG/M
3300010362\|Ga0126377_10551278	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300010366\|Ga0126379_12319218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	637	Open in IMG/M
3300010376\|Ga0126381_102344762	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300010376\|Ga0126381_104524503	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300010398\|Ga0126383_10243855	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300010398\|Ga0126383_10701829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300010398\|Ga0126383_11760722	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300011120\|Ga0150983_10588842	Not Available	1019	Open in IMG/M
3300012201\|Ga0137365_10063814	All Organisms → cellular organisms → Bacteria	2780	Open in IMG/M
3300012202\|Ga0137363_11139381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	663	Open in IMG/M
3300012362\|Ga0137361_10129913	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300012362\|Ga0137361_11405778	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300012363\|Ga0137390_11872275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012927\|Ga0137416_11448882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300012927\|Ga0137416_11701036	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300012930\|Ga0137407_11486843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300012971\|Ga0126369_11001284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	923	Open in IMG/M
3300012971\|Ga0126369_11689759	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300012971\|Ga0126369_11824318	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012975\|Ga0134110_10327394	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012984\|Ga0164309_10453678	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300015245\|Ga0137409_10649496	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300016270\|Ga0182036_11560559	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300016294\|Ga0182041_10348761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1243	Open in IMG/M
3300016294\|Ga0182041_10865320	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300016357\|Ga0182032_10532940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	969	Open in IMG/M
3300016357\|Ga0182032_11415114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300016387\|Ga0182040_11808214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	523	Open in IMG/M
3300016404\|Ga0182037_11290810	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300016422\|Ga0182039_10781448	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides → Bacteroides sp. SM23_62	846	Open in IMG/M
3300016422\|Ga0182039_12059457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	525	Open in IMG/M
3300017955\|Ga0187817_10368402	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300020579\|Ga0210407_10110982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2090	Open in IMG/M
3300021170\|Ga0210400_11071659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300021560\|Ga0126371_10509289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1352	Open in IMG/M
3300025922\|Ga0207646_10937082	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300025922\|Ga0207646_11495294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300025986\|Ga0207658_11822004	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300027862\|Ga0209701_10312087	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300027875\|Ga0209283_10071486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2235	Open in IMG/M
3300029636\|Ga0222749_10616179	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300031544\|Ga0318534_10851463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	511	Open in IMG/M
3300031640\|Ga0318555_10235170	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300031713\|Ga0318496_10515934	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300031716\|Ga0310813_11045153	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031723\|Ga0318493_10521921	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300031748\|Ga0318492_10684068	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031754\|Ga0307475_10176860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1702	Open in IMG/M
3300031754\|Ga0307475_10405583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1096	Open in IMG/M
3300031754\|Ga0307475_11270663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	571	Open in IMG/M
3300031770\|Ga0318521_10536816	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300031833\|Ga0310917_10993175	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031846\|Ga0318512_10585467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	568	Open in IMG/M
3300031890\|Ga0306925_11777045	Not Available	592	Open in IMG/M
3300031897\|Ga0318520_11064154	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031910\|Ga0306923_10267547	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300031912\|Ga0306921_10065119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4168	Open in IMG/M
3300031912\|Ga0306921_10372039	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300031945\|Ga0310913_10903605	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300031946\|Ga0310910_10732494	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300031946\|Ga0310910_11535753	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300031954\|Ga0306926_12390432	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300031962\|Ga0307479_10098281	All Organisms → cellular organisms → Bacteria → Acidobacteria	2842	Open in IMG/M
3300032001\|Ga0306922_10169276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2341	Open in IMG/M
3300032001\|Ga0306922_11068102	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300032076\|Ga0306924_10099386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3289	Open in IMG/M
3300032076\|Ga0306924_11022624	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300032091\|Ga0318577_10426099	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300032261\|Ga0306920_102125796	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300033289\|Ga0310914_11749527	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300033289\|Ga0310914_11843495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	509	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.36%
Host-Associated	Host-Associated	1.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.54%
Plants	Host-Associated → Plants	1.64%
Aquatic	Environmental → Aquatic	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.64%
Freshwater	Environmental → Aquatic → Freshwater	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.15%
Loam	Environmental → Terrestrial → Soil → Loam	16.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.10%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.28%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.28%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1010770161	3300000364	Soil	LPMPLVRVVLGKEFYRMFRWLNQQGFKAEIKELRRRYPEVGLQTLEQWLRSEGWDKRARRVRPPNG*
INPhiseqgaiiFebDRAFT_1011320782	3300000364	Soil	YQMFRWFNQEGFKADIKELRRRYPEVGLQTLEQWLRNEGWDKRARRVRPPNG*
JGI1027J12803_1012724401	3300000955	Soil	FNQEGFKADIKELRRRYPEVGLQTLEQWLRNEGWDKRARRVRPPNG*
Ga0058891_13633731	3300004104	Forest Soil	YQMFRWFNAEGYRANIPELRRKYPDLRLQTLEEWLYAEGWHKRARHVVPPKG*
Ga0066388_1017857542	3300005332	Tropical Forest Soil	EFYQMFRWFNDAGFKANIPELRRTYPEVRLQTLEDWLRAEGWHKRARHMVAPRP*
Ga0066388_1020508071	3300005332	Tropical Forest Soil	LGKEFYQMFRWFNAAGFQANIAELGRRYPEVRLRTLEEWLRDEGWQKRARRVRAPKG*
Ga0066388_1071751961	3300005332	Tropical Forest Soil	EFYLMFRWFNEAGFAADIPSLRHRYPEVHLNTLEEWLRTEGWQKRAKQMRAPRE*
Ga0066388_1073536621	3300005332	Tropical Forest Soil	SVMATMGKEFEQMSRWFNADGFKADIPRLRREHPDVRLQSLEEWLRNEGWHKRARRLSVPPA*
Ga0070708_1014119012	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PMVRLVLGKEFYQMFRWFNAEGLKANIPELRRKYPDVRLQTLEEWLRAEGWHKRARHLVPPKG*
Ga0073909_105525841	3300005526	Surface Soil	GKEFYVMFRWFNEAGYQANIPELKRKYPEVHLQTLEEWLRNEGWHKRAKHVRAPKG*
Ga0070730_109912882	3300005537	Surface Soil	KANIAELRKRYPEVHLQTLEQWLYSEGWHKRARHVRPPKG*
Ga0070732_102712993	3300005542	Surface Soil	MVRLVLGKEFYQMFRWFDTAGFKANIAELRKRYPEVQLQTLEQWLYTEGWHKRARHVRPPKG*
Ga0066702_104808713	3300005575	Soil	IPLPMVRLILGKEFYEMFRWFNQAGFAANIPALKASFPEVHLLDLETWLREEGWQKRARKVTAPKM*
Ga0066905_1002005751	3300005713	Tropical Forest Soil	WFNESGFKADIDGLRRRYPEVRLQTLEEWLRNEGWHKRARRVRPPKG*
Ga0066905_1006137922	3300005713	Tropical Forest Soil	WFNESGFKADIDGLRRRYPEVRLQTLEEWLRNEGWHKRARHVRPPKG*
Ga0066903_1005849364	3300005764	Tropical Forest Soil	RWFNESGFAADVDGLRRRYPDVRLQTLEEWLHNEGWHKRVRHVVAPRH*
Ga0066903_1007274811	3300005764	Tropical Forest Soil	ALRRNYPEAHLQTLEEWLRSEGWHKRAKRIRPPKE*
Ga0066903_1016823832	3300005764	Tropical Forest Soil	KLPMPMVRLVLGKEFHQMFRWFNREGFKADIADLRRRYPEVHFQTLEEWLIQEGWHKRARVVRPPKA*
Ga0066903_1049581012	3300005764	Tropical Forest Soil	TVRSGMGEEYYQMFSWFNTQGYQANIADLRRRYPEVRLQTLEDWLRSEGWRKHARPVQLPPA*
Ga0066903_1067481222	3300005764	Tropical Forest Soil	ADIADLRRRFPEVRLQTLEEWLRNEGWHKRARRVQAPKG*
Ga0066903_1067921821	3300005764	Tropical Forest Soil	GKEFYQMFRWFNDSGFEANIPELKRRYPEVRLRSLEEWLHDEGWHKRARRVVAPKG*
Ga0066903_1071769622	3300005764	Tropical Forest Soil	QMFRWFNAEGFQANIPELRRKYPEVHLQTLEEWLRAEGWHKRARHLEPPKV*
Ga0070717_110367283	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	WFNEAGYQANIPELKRKYPEVHLQTLEEWLRNEGWHKRAKHVRAPKG*
Ga0070717_113408411	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PMPMVRLFLGKEFYQMFRWFNQSGFKANILESRRKYPEVQLQTLEEWLRSERWHERARRVRPPKT*
Ga0079221_101348001	3300006804	Agricultural Soil	EAGYKADISGLRRRYPEVHLHTLEEWLLAEGWHKRARKVVAPKG*
Ga0099830_115589142	3300009088	Vadose Zone Soil	FNAEGFKANIPELRRKYPEVRLQSLEEWLRAEGWHKRARHLVPPKV*
Ga0099828_100571772	3300009089	Vadose Zone Soil	MFRWFNEAGFKADIPGLRRAYPEVHLQTLEEWLRNEGWHKRARPVRAPKE*
Ga0099828_103442751	3300009089	Vadose Zone Soil	LGREFYQMFRWFNAAGFQADIGALRRQYPEVHLQTLEEWLRNEGWHKRALRVRASKGS*
Ga0099828_118332781	3300009089	Vadose Zone Soil	LGKEFYEMFRWFNEAGYQANIPELRRRYPEVHLHSLEEWLRDEGWHKRALRFRAPKG*
Ga0099827_102769871	3300009090	Vadose Zone Soil	LGREFYQMFRWFNEAGFKANIADLRRRYPDVHLQTLEEWLRNEGWHKRARHVVPPKA*
Ga0066709_1027158502	3300009137	Grasslands Soil	NEEGFKADIAELRRRYPEVHQHTLEEWLRSEGWHKRVRRVQAPTG*
Ga0099792_101225453	3300009143	Vadose Zone Soil	YQMFRWFNQAGFKADIPRLRRQYPEVHLQTLEEWLRNEGWHKRARRVKPPKV*
Ga0111538_138336731	3300009156	Populus Rhizosphere	VRLVLGKEFYQMFRWFNDAGFKADIEALRRRYPEVHLRSLEEWLRDEGWQKRARHVSVPKE*
Ga0126374_100809621	3300009792	Tropical Forest Soil	RLPLLMVRVMLGKEFYQMFRWFNQAGFQADIPELQRRYPEVHFQTLEEWLTSEGWHKRARHVTPPTE*
Ga0126374_103060763	3300009792	Tropical Forest Soil	MVRLFLGKEFYQMFRWFNQSGFKANIPELRRKYPEIHFQTLEEWLRAEGWHKRARRVRPPKG*
Ga0126374_110208732	3300009792	Tropical Forest Soil	EFYQMFRWLNEAGFQADIHALKKKYPEVHLMNLEEWLRKEGWHKRARIVKAPKG*
Ga0126380_109146712	3300010043	Tropical Forest Soil	MVRVMLGKEFHQMFRWFNQAGFQADIPELQRRYPEVHFQTLEEWLTSEGWHKRARHVTPPTE*
Ga0126384_100072568	3300010046	Tropical Forest Soil	FLGKEFYQMFRWFNQSGFKANIPELRRKYPEIHLQTLEEWLRAEGWQKRARRVRPPKG*
Ga0126384_103867744	3300010046	Tropical Forest Soil	VKFQKLPMPMVRLFLGKEFYQMFRWFNQSGFKATIPELRRKYPELHFQTLEEWLRAEGWHKRARRVRPPKG*
Ga0126384_117233482	3300010046	Tropical Forest Soil	YQMFRWFNDAGLNADIADLRKRYPGVRLQTPEQWLSNDGWHKSARHFRPPKG*
Ga0126373_102285525	3300010048	Tropical Forest Soil	KEFYQMFRWFNQSGFKANIPELRRKYPEIHFQTLGEWLRAEGWHKRARRVRPPKG*
Ga0126373_112459551	3300010048	Tropical Forest Soil	AGYQADIPALRRAYPEIHLHTLEEWLRMEGWHKRARRVIAPKE*
Ga0126376_123350681	3300010359	Tropical Forest Soil	MVRLFLGKEFYQMFRWFNEAGFQANIPELRRKYPEVRLQNLEEWLRAEGWHKRARRVRPPKT*
Ga0126372_111400731	3300010360	Tropical Forest Soil	VVLGQEFYEMFRWFNESGFKADIDGLRGRYPEVRLQTLEEWLRNEGWHKRARRVRPPKG*
Ga0126372_111862911	3300010360	Tropical Forest Soil	DIAGLRRQYPDAPLQTLEEWLRREGWHKRVRRVSAPNQ*
Ga0126372_115414202	3300010360	Tropical Forest Soil	GFKANIPELKRRYPEVRLRSLEEWLRDEGWQKRARRVVAPRG*
Ga0126372_115977822	3300010360	Tropical Forest Soil	RWFNEAGFKADISGLRRAYPEIHLRSLEEWLRMEGWQKRARRVRAPKG*
Ga0126378_100921782	3300010361	Tropical Forest Soil	MFGWFNESGFRADIAGLLRHYPQIHLLSLEEWLRSEGWHKRAWHIRAPRG*
Ga0126378_125027122	3300010361	Tropical Forest Soil	WFNESGFKADIEGLRRRHPEVRLQTLEEWLRNEGWHKRARHVVAPKG*
Ga0126377_105512782	3300010362	Tropical Forest Soil	VRMVLGKEFYQMFRWFNQAGFQADIPELQRRYPEVHFQTLEEWLTSEGWHKRARHVTPPTE*
Ga0126379_123192181	3300010366	Tropical Forest Soil	DSGFKADIPGLKRRYPEVRLRSLEEWLRDEGWHKRGRHVVAPKG*
Ga0126381_1020336183	3300010376	Tropical Forest Soil	RANIPELRTRYPEVHLHTLEEWLRAEGWHKRARHVTAPKG*
Ga0126381_1023447621	3300010376	Tropical Forest Soil	EFYQMFRWFNESGFQANIPELRRKYSEVPLQTLEQWLRNEGWHKRARHLQPPKG*
Ga0126381_1045245031	3300010376	Tropical Forest Soil	MFRWFNESGFQANIPELRRKYPEVPLQTLEQWLRNEGWHKRARHLQPPKG*
Ga0126383_102438551	3300010398	Tropical Forest Soil	KLPMPMVRLVLGKEFYQMFRWFNESGFKADIAFLRRRYPEVHLQTLDEWLRNEGWHKRARRVQAPKG*
Ga0126383_107018292	3300010398	Tropical Forest Soil	GREFYQMFRWFNDSGFKADIPELKRRYPEVRLRSLEEWLRDEGWHKRARHVVAPKG*
Ga0126383_117607221	3300010398	Tropical Forest Soil	ASGFKANIPDLKRRYPEVRLRSLEEWLRDEGWHKRARHVVPPKG*
Ga0150983_105888423	3300011120	Forest Soil	FKANVPELRRKYPDLRLQTLEEWLYAEGWHKRARHVVPPKG*
Ga0137365_100638142	3300012201	Vadose Zone Soil	LGKPVKFQKLPMPLVRLVLAREFYQMFRWFNEAGVTGFKADIPALKNNYPEVRLLNLEEWLIREGWHKRARKVKPPKG*
Ga0137363_111393811	3300012202	Vadose Zone Soil	FQKLPLPLVRLILGREFYQMFRWFNEAGFKDDIPALKNNYPEVRLLNLEEWLIREGWHKRARKVKPPKG*
Ga0137361_101299132	3300012362	Vadose Zone Soil	VKFQKLPLPLVRWVLGREFYQMFRWFNEAGFKADISALKNNYPEVRLLNLEEWLIREGWHKRARKVKPPKG*
Ga0137361_114057782	3300012362	Vadose Zone Soil	LGKELYQMFRWFNQSGFQADIPALKRRFPEVRLLSLEEWLREEGWQKRARILKPPSD*
Ga0137390_118722752	3300012363	Vadose Zone Soil	FRWFNQSGLKANIPELRRKYPEVQLQTLEEWLRSEGWHKRARRVRPPKT*
Ga0137416_114488821	3300012927	Vadose Zone Soil	EFYQMFRWFNQAGFKADIPRLRRQYPEVHLQTLEEWLRNEGWHKRARRVKPPKV*
Ga0137416_117010361	3300012927	Vadose Zone Soil	MLAVRLFLGKEFYQMFRWFNRAGFEADIADLRRRYPEVRLYTLEEWLRAEGWHKRARHVSPPKA*
Ga0137407_114868431	3300012930	Vadose Zone Soil	GFKSDIEGLRRRYPEVHLRTLEEWLHDEGWHKRARHVRAPKG*
Ga0126369_110012843	3300012971	Tropical Forest Soil	FYQMFRWFNDSGFKADIPALKKNFPEVHLLSLEEWLMEEGWHKRARKVTPPRD*
Ga0126369_116897591	3300012971	Tropical Forest Soil	QMFRWFNEEGFKADIKELRSRYPEVRLQTLEEWLRSEGWHKRARRVRPPRG*
Ga0126369_118243181	3300012971	Tropical Forest Soil	SSGFNANISELRRKYPEIHLHTLEEWLRAEGWHKRARHVVAPRG*
Ga0134110_103273942	3300012975	Grasslands Soil	RKLPLPMVRLVLGKEFYQMFRWFNEAGFQADIPTLKRRFPEIHLLSLEEWLREEGWHKRVRVVKPPRE*
Ga0164309_104536781	3300012984	Soil	TLADIAGLRRHYPQVRLQTLEEWLRNEGWQKRVRRVRAPKQ*
Ga0137409_106494961	3300015245	Vadose Zone Soil	WFNQAGFNANIPELRRKYPEVRLQTLEEWLRAEGWHKRARRVRAPKV*
Ga0182036_115605591	3300016270	Soil	PIRRPRRFSVGKPVRFRKLPMPMVRLVLGKEFYQMFHWFNADGFRANIPELRRNYPEVHLQTLEEWLRAEGWHKRARHIVPPKA
Ga0182041_103487613	3300016294	Soil	NEEGFKANIAELRRRYPEVYLHTLEEWLRSEGWHKHARRVQAPTG
Ga0182041_108653201	3300016294	Soil	KKVTFRRLPLSIVRLFLGKEFYQMFRWFNDAGFNANIAELRRRYPEIHLRALEEWLRDEGWHKRARHVRAPKS
Ga0182032_105329401	3300016357	Soil	RLVLGKEFYQMFRWFNEAGFKADIAGLRRRYPEVHLKNLEEWLHSEGWHKRARRVVPPKG
Ga0182032_114151141	3300016357	Soil	VLGKEFHQMFRWFNEEGFKANIKELRSRYPEVRLQTLEEWLRSEGWHKR
Ga0182040_118082141	3300016387	Soil	VKFQKLPMPMVRLILGKEFYQMFHWFNTAGFKADIPELRSKYPEVQLHTLEDWMREEGWHKRARHVSPPRG
Ga0182037_112908101	3300016404	Soil	VRLLLGKEFFQMFRWVNEQGFKADIGHLRRLYPEVHLQTLEEWLRREGWHKRAQRVRPPK
Ga0182039_107814481	3300016422	Soil	GKEFYQMFRWFNEAGFQADIAGLRRLYPEVHLQTLEEWLHNEGWHKRARHVQPPRA
Ga0182039_120594571	3300016422	Soil	LPMPMVRLVLGKEFYQMFRWFNDAGFKADIGGLCRRYPEVHLQNLEEWLRSEGWHKRARSVAPPKG
Ga0187817_103684022	3300017955	Freshwater Sediment	MFRWFNDAGFHADIAGLRRQYPEVHLQTPEEWLPSEGWQKRAKRVCAPKEE
Ga0210407_101109824	3300020579	Soil	MFNESGFKADIAGLPRAHPEIRLQSLEERLRNEGWHKRAKRVRAPKE
Ga0210400_110716591	3300021170	Soil	LVLGREFYEMFRWFNEAGFQADIPSLKRRFPEIHLLSLEEWLREEGWHKRARKVKPPKE
Ga0126371_105092892	3300021560	Tropical Forest Soil	FNIAGFKADIDGLRRRYPEVRLRSLEEWLRDEGWHKRARRVRAPKG
Ga0207646_109370821	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPIVRLVLGKEFYQMFRWFNQEGFQADIRELRRRYPEIGLQTLEQWLRSEGWDKRVRRVRPPTVSKGE
Ga0207646_114952941	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VKFQKLPLPIVRIVLGKEFHQMFRWFNTAGFKADISALRRQYPEVHLQTLEMWLRNEGWHKRARRVRLPRA
Ga0207658_118220042	3300025986	Switchgrass Rhizosphere	VLGKELYQMFRLFNQSGFQADIPALKRRFPDVRLLSLEEWLREEGWQKRARILKPERD
Ga0209701_103120871	3300027862	Vadose Zone Soil	LPLVRLILGKEFYVMFRWFNEAGFKADISGLRRAYPEIRLQTLEEWLRSEGWHKRAKRMRAPKE
Ga0209283_100714864	3300027875	Vadose Zone Soil	GYKADIPSLRKKYPEVRLQTLEEWLRNEGWHKRAKRVRAPKE
Ga0222749_106161791	3300029636	Soil	QMFRWFNAEGFKANIPELRRKYPEVRLQTLEEWLRAEGWHKRARHVLPPKS
Ga0318534_108514632	3300031544	Soil	AELRRRYPEVRLRTLEEWLRDEGWQKRARRVRAPRG
Ga0318555_102351701	3300031640	Soil	VKFQRLPMVIVRLFLGKEFYQMFRWFNAAGFQANIAELRRRYPEVRLRTLEEWLRDEGWQKRARRVRAPRG
Ga0318542_104929131	3300031668	Soil	YNANIAELRRRYPEVHLHTLEEWLRAEGWHKRARRVTAPPAG
Ga0318496_105159341	3300031713	Soil	GFRANIGALRRQYPDVRLQTLEEWLRAEGWPKRARRVRPPKA
Ga0310813_110451533	3300031716	Soil	NEAGYQANIPELKRKYPEVHLQTLEEWLRNEGWHKRAKHVRAPKG
Ga0318493_105219212	3300031723	Soil	FNAAGFQANIAELRRRYPEVRLRTLEEWLRDEGWQKRARRVRAPRG
Ga0318492_106840681	3300031748	Soil	GFQANIAELRRRYPEVRLRTLEEWLRDEGWQKRARRVRAPRG
Ga0307475_101768602	3300031754	Hardwood Forest Soil	PLPLVRLVLGKEFYLMFRWFNEAGFQADISALRRRYPEIHLHSHLHSLEEWLRAEGWHKRARYVRAPKT
Ga0307475_104055831	3300031754	Hardwood Forest Soil	LGKEFHQMFRWFNQAGFNADIAGLRRRYPEIRLRSLETWLYDEGWHKRARRVHAPRG
Ga0307475_112706631	3300031754	Hardwood Forest Soil	LGKEFYQMFRWFNTAGFQANIADLRKRYPEIQLQTLEQWLYNEGWHKRARRVRPPKG
Ga0318521_105368162	3300031770	Soil	PVKFQKLPMPMVRLILGKEFYQMFHWFNTAGFQANIPELRSRYPEVQLHSLEDWLREEGWHKRARHVTPPKG
Ga0310917_109931751	3300031833	Soil	IVKLFMGKEFYEMFRWFNEAGFKADIPGLKRKYPEVELLSLEEWLLREGWQKRARVLKPPNA
Ga0318512_105854671	3300031846	Soil	RLFLGKEFYQMFRWFNAAGFQANIAELRRRYPEVRLRTLEEWLRDEGWQKRARRVRAPRG
Ga0306925_117770452	3300031890	Soil	PMVRVVLGREFYQMFRWFNEAGFQADIPWLQRMYPAVHFQTLEEWLRNEGWHKRARHVTPPRK
Ga0318520_110641541	3300031897	Soil	AAGFQANIAELRRRYPEVRLRTLEEWLRDEGWQKRARRVRAPRG
Ga0306923_102675471	3300031910	Soil	FQLLPMPLVRVVLGKEFYQMFRWFNEEGFRADIKELRRRYSEIRLQTLEEWLRSEGWHKHARRVRPPRS
Ga0306921_100651198	3300031912	Soil	LVRVVLGKEFYQMFRWFNEEGFRADIKELRRRYSEIRLQTLEEWLRSEGWHKHARRVRPPRS
Ga0306921_103720391	3300031912	Soil	KEFYQMFHWFNEAGFKADIASLRRRYPEVHLQTLEEWLRNEGWHKRARRVVPPKG
Ga0310913_109036052	3300031945	Soil	MFRWFNDAGFKADIGALRRNYPEAHLQTLEEWLRHEGWHKRAKRVRPPKE
Ga0310910_107324941	3300031946	Soil	RWFNEAGFKADIASLRRRYPEVHLQTLEEWLRNEGWHKRARRLVPPKS
Ga0310910_115357531	3300031946	Soil	FHQMFRWFNEKGFKADITELRSRYPELRLQTLEEWLRNEGWHKRARRVRPPRG
Ga0306926_123904322	3300031954	Soil	IVKLFLGREFYQMFRWFNDSGFKADIPELKRRYPEVRLRSLEEWLRDEGWHKRARRVVAPRG
Ga0307479_100982813	3300031962	Hardwood Forest Soil	MFRLFNEAGFKAGIAGLRHANPEVCLQTLEEWLQSEGWHKRAKRVRAPKE
Ga0306922_101692761	3300032001	Soil	RWFNDAGFKGDIPSLKKKYPEVRLLNLEEWLISEGWHKRARRVTPPKE
Ga0306922_110681022	3300032001	Soil	MPLVRVVLGKEFYQMFRWFNEEGFRADIKELRRRYSEIRLQTLEEWLRSEGWHKHARRVRPPRS
Ga0306924_100993861	3300032076	Soil	EFYQMFRWFNAAGFQANIAELRRRYPEVRLRTLEEWLRDEGWQKRARRVRAPRG
Ga0306924_110226242	3300032076	Soil	FQADIADLRRRFPEVHLQSLEEWLRSEGWHKRARHIVPPKDSR
Ga0318577_104260991	3300032091	Soil	LVRLVLGKEFYQMFRWFNAEGFRADIGALRRQYPDVRLQTLEEWLRAEGWPKRARRVRPPKA
Ga0306920_1021257961	3300032261	Soil	DGAGREFYQSSAGSMCFKANITELRRRYPEVRLQTLEEWLRAEGWHKRARRVVPPQG
Ga0310914_117495271	3300033289	Soil	VPMPIPAEKEYSQMFNWFNNAGFQANIASLRNQYPGARLQTLEEWLYNEGWHKRVRRITPPEG
Ga0310914_118434952	3300033289	Soil	PMLMVRLILGKEIYQMFRWFNQAGFKAGIAGLRRRYPEVHLKNLEEWLHSEGWHKRARRVVPPKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071008

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences