NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F071042

Metagenome Family F071042

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F071042
Family Type Metagenome
Number of Sequences 122
Average Sequence Length 72 residues
Representative Sequence VHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGAVTATA
Number of Associated Samples 103
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 12.30 %
% of genes near scaffold ends (potentially truncated) 81.97 %
% of genes from short scaffolds (< 2000 bps) 95.08 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (61.475 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(22.951 % of family members)
Environment Ontology (ENVO) Unclassified
(26.230 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.082 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.53%    β-sheet: 0.00%    Coil/Unstructured: 49.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF00106adh_short 47.93
PF03625DUF302 9.92
PF13561adh_short_C2 8.26
PF00561Abhydrolase_1 7.44
PF05368NmrA 3.31
PF12697Abhydrolase_6 2.48
PF13460NAD_binding_10 0.83
PF05423Mycobact_memb 0.83
PF00872Transposase_mut 0.83
PF03176MMPL 0.83
PF01844HNH 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG3439Uncharacterized conserved protein, DUF302 familyFunction unknown [S] 9.92
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.83
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.83
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.48 %
UnclassifiedrootN/A38.52 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001867|JGI12627J18819_10226334Not Available753Open in IMG/M
3300005332|Ga0066388_106142884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia606Open in IMG/M
3300005337|Ga0070682_101324127Not Available613Open in IMG/M
3300005353|Ga0070669_100714957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia847Open in IMG/M
3300005367|Ga0070667_101047998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia762Open in IMG/M
3300005450|Ga0066682_10344776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium960Open in IMG/M
3300005451|Ga0066681_10523313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium732Open in IMG/M
3300005458|Ga0070681_11424188Not Available617Open in IMG/M
3300005539|Ga0068853_101759836Not Available601Open in IMG/M
3300005543|Ga0070672_101562352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300005569|Ga0066705_10336646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae953Open in IMG/M
3300005764|Ga0066903_105865873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia644Open in IMG/M
3300005764|Ga0066903_108420369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua526Open in IMG/M
3300006797|Ga0066659_10126990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1779Open in IMG/M
3300006854|Ga0075425_102877146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium528Open in IMG/M
3300006871|Ga0075434_100338051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium1526Open in IMG/M
3300006904|Ga0075424_100903824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria942Open in IMG/M
3300009098|Ga0105245_10195165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1941Open in IMG/M
3300009098|Ga0105245_12516017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua568Open in IMG/M
3300009143|Ga0099792_10403433Not Available837Open in IMG/M
3300009174|Ga0105241_12200141Not Available547Open in IMG/M
3300009176|Ga0105242_11154742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia791Open in IMG/M
3300009545|Ga0105237_12273383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia552Open in IMG/M
3300009553|Ga0105249_12002908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia652Open in IMG/M
3300009553|Ga0105249_12061373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia643Open in IMG/M
3300010159|Ga0099796_10468658All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300010376|Ga0126381_102502162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia740Open in IMG/M
3300010376|Ga0126381_104649945Not Available529Open in IMG/M
3300010397|Ga0134124_10948339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua870Open in IMG/M
3300010401|Ga0134121_12285969Not Available579Open in IMG/M
3300010403|Ga0134123_13259857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia523Open in IMG/M
3300010863|Ga0124850_1067884Not Available1090Open in IMG/M
3300011269|Ga0137392_11045207All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300012582|Ga0137358_10025115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3866Open in IMG/M
3300012924|Ga0137413_10159500All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300012924|Ga0137413_11298379Not Available584Open in IMG/M
3300012925|Ga0137419_10021129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium3803Open in IMG/M
3300012927|Ga0137416_10174735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1704Open in IMG/M
3300012929|Ga0137404_10242554All Organisms → cellular organisms → Bacteria1544Open in IMG/M
3300012951|Ga0164300_10164193All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300012957|Ga0164303_10153650Not Available1221Open in IMG/M
3300012958|Ga0164299_10166839Not Available1237Open in IMG/M
3300012958|Ga0164299_11272995Not Available561Open in IMG/M
3300012961|Ga0164302_11800379Not Available517Open in IMG/M
3300012971|Ga0126369_11774018Not Available706Open in IMG/M
3300012985|Ga0164308_10232004All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300012985|Ga0164308_11623078Not Available598Open in IMG/M
3300012986|Ga0164304_10131641Not Available1547Open in IMG/M
3300012986|Ga0164304_10131641Not Available1547Open in IMG/M
3300012986|Ga0164304_11187357Not Available615Open in IMG/M
3300012988|Ga0164306_10116443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1771Open in IMG/M
3300012988|Ga0164306_10321607Not Available1136Open in IMG/M
3300012989|Ga0164305_10365688Not Available1092Open in IMG/M
3300013306|Ga0163162_12390446Not Available607Open in IMG/M
3300013306|Ga0163162_12589193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua584Open in IMG/M
3300013307|Ga0157372_11438195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia795Open in IMG/M
3300013307|Ga0157372_12049424Not Available657Open in IMG/M
3300014968|Ga0157379_12305069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia536Open in IMG/M
3300014969|Ga0157376_12667679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua539Open in IMG/M
3300015051|Ga0137414_1214247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3864Open in IMG/M
3300015242|Ga0137412_10024010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4972Open in IMG/M
3300016270|Ga0182036_11671512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua537Open in IMG/M
3300016294|Ga0182041_10919655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia787Open in IMG/M
3300016319|Ga0182033_10242174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1460Open in IMG/M
3300016319|Ga0182033_11809432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua554Open in IMG/M
3300016371|Ga0182034_12022930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua509Open in IMG/M
3300016387|Ga0182040_10595923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua894Open in IMG/M
3300016422|Ga0182039_11962038Not Available538Open in IMG/M
3300020579|Ga0210407_10241428Not Available1407Open in IMG/M
3300020583|Ga0210401_10370030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1295Open in IMG/M
3300021404|Ga0210389_10138594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1883Open in IMG/M
3300021404|Ga0210389_10202472Not Available1548Open in IMG/M
3300021404|Ga0210389_10710006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia787Open in IMG/M
3300021439|Ga0213879_10126195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia731Open in IMG/M
3300022557|Ga0212123_10605154Not Available691Open in IMG/M
3300025910|Ga0207684_11306684All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300025915|Ga0207693_10631850Not Available832Open in IMG/M
3300025937|Ga0207669_11931733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua504Open in IMG/M
3300026496|Ga0257157_1091064Not Available531Open in IMG/M
3300026508|Ga0257161_1069324Not Available722Open in IMG/M
3300027502|Ga0209622_1063744Not Available671Open in IMG/M
3300027548|Ga0209523_1025176Not Available1178Open in IMG/M
3300027603|Ga0209331_1039659Not Available1202Open in IMG/M
3300027616|Ga0209106_1041974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1018Open in IMG/M
3300027646|Ga0209466_1097283All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623596Open in IMG/M
3300027727|Ga0209328_10051553Not Available1264Open in IMG/M
3300028047|Ga0209526_10246497Not Available1223Open in IMG/M
3300028047|Ga0209526_10958890Not Available515Open in IMG/M
3300031544|Ga0318534_10577091All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300031561|Ga0318528_10170529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis1162Open in IMG/M
3300031561|Ga0318528_10172102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1156Open in IMG/M
3300031679|Ga0318561_10722642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua547Open in IMG/M
3300031718|Ga0307474_11218276Not Available595Open in IMG/M
3300031719|Ga0306917_10993011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia655Open in IMG/M
3300031723|Ga0318493_10583294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua622Open in IMG/M
3300031744|Ga0306918_10075091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2334Open in IMG/M
3300031751|Ga0318494_10736501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua577Open in IMG/M
3300031753|Ga0307477_10444043Not Available885Open in IMG/M
3300031754|Ga0307475_10299981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium1290Open in IMG/M
3300031754|Ga0307475_11041503Not Available642Open in IMG/M
3300031768|Ga0318509_10069167All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix australiensis1848Open in IMG/M
3300031777|Ga0318543_10447140Not Available579Open in IMG/M
3300031780|Ga0318508_1038688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis1234Open in IMG/M
3300031805|Ga0318497_10159239Not Available1239Open in IMG/M
3300031819|Ga0318568_10872238Not Available557Open in IMG/M
3300031823|Ga0307478_11490672Not Available560Open in IMG/M
3300031823|Ga0307478_11604895Not Available537Open in IMG/M
3300031831|Ga0318564_10436879Not Available571Open in IMG/M
3300031832|Ga0318499_10009830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3070Open in IMG/M
3300031859|Ga0318527_10192666All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300031890|Ga0306925_11557687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia644Open in IMG/M
3300031896|Ga0318551_10258286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria974Open in IMG/M
3300031910|Ga0306923_12138043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua563Open in IMG/M
3300031954|Ga0306926_10889064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis1067Open in IMG/M
3300031962|Ga0307479_10943961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia834Open in IMG/M
3300032008|Ga0318562_10099561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix australiensis1649Open in IMG/M
3300032010|Ga0318569_10397914All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia642Open in IMG/M
3300032035|Ga0310911_10762947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua559Open in IMG/M
3300032066|Ga0318514_10094923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis1505Open in IMG/M
3300032174|Ga0307470_11479223Not Available564Open in IMG/M
3300033289|Ga0310914_10945562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia761Open in IMG/M
3300034384|Ga0372946_0577579Not Available545Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil22.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.84%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.02%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.56%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.28%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.46%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.46%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.46%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.46%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.64%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.64%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.64%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.64%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.82%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.82%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.82%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300027502Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027548Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12627J18819_1022633423300001867Forest SoilMEFLTNVTIAVVHSGGLVNDAMIQHLPTHARKMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA*
Ga0066388_10614288423300005332Tropical Forest SoilQLTAAAVHSGGLVSDAMIQHLTTHARMTEDNTTIARMDVDSSALAAASGRPPLSFRDFVKQHRAAFGAVREEP*
Ga0070682_10132412723300005337Corn RhizosphereVNDAMIQHLPTHARTFEDNTTIARMDTDPSTLAAASGRRPLTFRNFVRQHRIAFGAVTANA*
Ga0070669_10071495713300005353Switchgrass RhizosphereRPRRPLQYITPEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGAVTADV*
Ga0070667_10104799813300005367Switchgrass RhizosphereEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARTMEENAAILRMETDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA*
Ga0066682_1034477613300005450SoilYQYITQDEWIGQLTAAAVHSGGLVSDAMIQHLTTHARMTEDNTTIARMDVDPSALATASGRPPLSFRDFVKQHRAAFGAVPEEP*
Ga0066681_1052331313300005451SoilSDAMIQHLTTHARMTEDNTTIARMDVDPSALATASGRPPLSFRDFVKQHRAAFGAVPEEP
Ga0070681_1142418813300005458Corn RhizosphereMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA*
Ga0068853_10175983623300005539Corn RhizosphereVNDAMIQHLPTHARAMADNTSIAQMDPDPAALASASGRPPLTFRKFVRQHRTAFGALTATA*
Ga0070672_10156235223300005543Miscanthus RhizosphereHSGGLVNDAMIQHLPTHARTMEENAAILRMDTDPSALAAASGRPPLTFRNFVRQHRTAFEALTATA*
Ga0066705_1033664623300005569SoilMIQHLTTHARMTENNTTIARMDVDPSALAAASGRPPLSFRDFVKQHRAAFGAVPERAVG*
Ga0066903_10586587313300005764Tropical Forest SoilAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALNATA*
Ga0066903_10842036923300005764Tropical Forest SoilVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGAVTATA*
Ga0066659_1012699023300006797SoilMIQHLTTHARMTENNTTIARMDVDPSALAAASGRPPLSFRDFVKQHRAAFAAGPERAVG*
Ga0075425_10287714623300006854Populus RhizosphereIGQLTAAAVHSGGLVSDAMIQHLTTHARMTEDNTTIARMDVDPSALAAASGRPPLSFRDFVKQHRAAFGAVPEEP*
Ga0075434_10033805113300006871Populus RhizosphereGQLTAAAVHSGGLVSDAMIQHLTTHARMTEDNTTSARMDVDPSALATASGRPPLSFRDFVKQHRAAFGAVPEEP*
Ga0075424_10090382413300006904Populus RhizosphereHTMIQHITTLAAMCEDNTAILRKDIDPSALAAASGRAPLTFRNFVRQRRSAFGAVTAKV*
Ga0105245_1019516513300009098Miscanthus RhizosphereRYQYITPDEWTRQLKAAAVHSGGLVNDAMIQHLPTHARAMADNTSIAQMDPDPAALASASGRPPLTFRKFVRQHRTAFGALTATA*
Ga0105245_1251601713300009098Miscanthus RhizosphereLKAAAVHSGGLVNDAMIQHLPTHARMMADNTAIMRMDTDPSALAAASGRAPLSFRNFVRQHRSAFGAVTAKV*
Ga0099792_1040343323300009143Vadose Zone SoilMIQHLTTHARMMEDNTTISRMDTDPSFLAAASGRPPLTFRNFVRQHRSAFGALTATA*
Ga0105241_1220014123300009174Corn RhizosphereAAVHSGGLVNDAMIQHLPTHARTMEENAAILRMETDPSALAAASGRPPLTFRNFVRQHRSAFGALTAKV*
Ga0105242_1115474213300009176Miscanthus RhizosphereHITADDWSRQLYAHSGGLPNHAMITHITTQATMCANNTTILRKDTDPSALAAASGRPPLTFRNFVRQHRSAFGAATANV*
Ga0105237_1227338313300009545Corn RhizosphereGLPNDAMIQHITTLAAMCEDNTAILRKDTDPSALAAASGRAPLSFRNFVRRHRPAFGAVAATA*
Ga0105249_1200290823300009553Switchgrass RhizosphereMIQHITTLAAMCEDNTAILRKDIDPSALAAASGRAPLSFRNFVRQHRSAFGAVTAKV*
Ga0105249_1206137313300009553Switchgrass RhizosphereAHSGGLPNHAMITHITTQATMCANNTTILRKDTDPSALAAASGRSPLTFRNFVRQHRSAFGAATANV*
Ga0099796_1046865813300010159Vadose Zone SoilQLQAASGGLPNHSMIEHITTNAAMCENDTTILRKDIDPSALEAASGRPPLTFRNFIRQHRAAFGALTANA*
Ga0126381_10250216213300010376Tropical Forest SoilNDAMIQHLPTHARMMEDNTTISRMDTDPAALAAASGRPPLTFRNFVRQHRTAFGALPATA
Ga0126381_10464994523300010376Tropical Forest SoilDAMIQHLTTHARMTEDNTTIARMGVDPSALAAASGRSPLSFRDFVKRHRTVFGAVPEEP*
Ga0134124_1094833913300010397Terrestrial SoilTANDWSRQLQAQFGGLPNHAMIQHITTLAAMCEDNTAILRMDTDPSALAAASGRAPLTFRNFVRQHRPAFGAVAATA*
Ga0134121_1228596923300010401Terrestrial SoilMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGAVTADV*
Ga0134123_1325985723300010403Terrestrial SoilDWSRQLQAQFGGLPNHAMIQHITTLAAMCEDNTAILRKDTDPSALAAASGRAPLSFRNFVRRHRPAFGAVAATA*
Ga0124850_106788413300010863Tropical Forest SoilSPRMSGEWIGQLTAAAVHSGGLVSDAMIQHLTTHARMTEDNTTIARMDVDPSALAAASGRPPLSFRDFVKQHRAAFGAVPEEP*
Ga0137392_1104520723300011269Vadose Zone SoilRQLQAASGGLPNHSMIEHITTNAAMCENDTTILRKDIDPSALEAASGRPPLTFRNFIRQHRAAFGAVTANA*
Ga0137358_1002511553300012582Vadose Zone SoilNDAMIQHLPTHARTMADNTTIAARMDIDPSALAAASGRPPQTFRDFVRQHRSAFGAVAA*
Ga0137413_1015950013300012924Vadose Zone SoilRYQYITQEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMADNTSIAQMDPDPSVLAAASGRPPQTFRDFVRQHRSAFGAVAA*
Ga0137413_1129837913300012924Vadose Zone SoilLKAAAVHSGGLVNDAMIQHLPTHARTMEENAAILRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTANA*
Ga0137419_1002112963300012925Vadose Zone SoilIQHLPTHARTMADNTTIAARMDIDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA*
Ga0137416_1017473533300012927Vadose Zone SoilVHSGGLVNDAMIQHLPTHARTMADNTTIAARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTADA*
Ga0137404_1024255433300012929Vadose Zone SoilHSGGLVSEAMIQHLTTHARMTEDNTTIARMDVDPSALAAASGRPPLSFRDFVKQHRAGFGAVPEEP*
Ga0164300_1016419323300012951SoilMEFLTNVTIAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRPAFGAVTANA*
Ga0164303_1015365023300012957SoilMEFLTNVTIAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA*
Ga0164299_1016683923300012958SoilMEFLTNVTIGRPLRRPGNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA*
Ga0164299_1127299513300012958SoilRQLKAAAVHSGGLVNDAMIQHLPTHARTMEDNTTIARMDTDPSALAAASGRPPQTFRNFVRQHRSAFGAVTAKV*
Ga0164302_1180037923300012961SoilEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARTFEDNTTIARMETDPWALAAASGRAPLSFRNFVRQHRSAFGAVSANA*
Ga0126369_1177401823300012971Tropical Forest SoilAAAVHSGGLVSDAMIQHLTTHARMTEDNTTIARMGVDPSALAAASGRSPLSFRDFVKRHRTVFGAVPEEP*
Ga0164308_1023200413300012985SoilMEFLTNVTIAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTAGV*
Ga0164308_1162307813300012985SoilSGGLPNHTMIQHITTLGEMCENNTAIMRKDIDPSALAAASGRPPLTFRNFVRKHRSAFGAATADV*
Ga0164304_1013164123300012986SoilMEFLTNVTIAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGAVTADV*
Ga0164304_1013164143300012986SoilEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARTMEENAAILRMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA*
Ga0164304_1118735723300012986SoilMIQHITTLAAMCEDNTAILRKDIDPSALATASGRAPLTFRNFVRQHRSAFGAVTAKV*
Ga0164306_1011644313300012988SoilDAMIQHLPTHARTFEDNTTIARMDTDPWALAAASGRAPLSFRNFVRQHRSAFGAVSANA*
Ga0164306_1032160723300012988SoilTQEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARTMEENAAILRMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA*
Ga0164305_1036568813300012989SoilMEFLTNVTIGRPLRRPGNDAMIQHLPTHARMMADNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA*
Ga0163162_1239044613300013306Switchgrass RhizosphereEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGAVTADV*
Ga0163162_1258919323300013306Switchgrass RhizosphereSGGLPNHTMTQHITTLGEMCEHNTAIMRKDIDPSALAAASGRPPLTFGNFVRQHSSAFGAVTAKV*
Ga0157372_1143819513300013307Corn RhizosphereDVRYQYINQEEWTRQLKAAADHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANV*
Ga0157372_1204942433300013307Corn RhizosphereHQRGNRPRRPLQYITPEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGAVTADV*
Ga0157379_1230506913300014968Switchgrass RhizosphereDWSRQLQAQFGGLPNDAMIQHITTLAAMCEDNTAILRKDTDPSALAAASGRAPLSFRNFVRRHRPAFGAVAATA*
Ga0157376_1266767913300014969Miscanthus RhizosphereQYITAEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARTFEDNTTIARMETDPWALAAASGRAPLSFRNFVRQHRSAFGAVTADA*
Ga0137414_121424733300015051Vadose Zone SoilVDRQLKAAAVHSGGLVNDAMIQHLPTHARTMADNTTIAARMDTDPPPSQRPAAAPLTFRNFVANTVQHSDRHSNV*
Ga0137412_1002401053300015242Vadose Zone SoilVHSGGLVNDAMIQHLPTHARMMADNTSIAQMDPDPSVLAAASGRPPQTFRDFVRQHRSAFGAVAA*
Ga0182036_1167151213300016270SoilMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALNATA
Ga0182041_1091965523300016294SoilVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0182033_1024217413300016319SoilKAAAVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0182033_1180943213300016319SoilKAAAVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTGTA
Ga0182034_1202293013300016371SoilAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALNATA
Ga0182040_1059592313300016387SoilKAAAVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALNATA
Ga0182039_1196203813300016422SoilKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0210407_1024142833300020579SoilMEFLTNVTIAAVHSGGLVNDAMIQHLPTHARKMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA
Ga0210401_1037003023300020583SoilNQEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARTMADNTTIAARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGALTATA
Ga0210389_1013859433300021404SoilEETGREVRYQYITQDEWIRQLKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDIDPSALAAASGRPPLTFRNFVRQHRPAFGAVTANV
Ga0210389_1020247233300021404SoilRYQYITQDEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA
Ga0210389_1071000623300021404SoilVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDIDPPALAAASGRPPLTFRNFVRQHRSAFGAVTANA
Ga0213879_1012619513300021439Bulk SoilITADEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMQDNTTISRMDTDPSALAAASGRPPLTFRGFVRQHRTAFGALTATV
Ga0212123_1060515413300022557Iron-Sulfur Acid SpringMEFLTNVTIAAVHSGGLVNDAMIRHLPTHARKMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRLAFGAVTVNA
Ga0207684_1130668413300025910Corn, Switchgrass And Miscanthus RhizosphereKAAAVHSGGLVNDAMIQHLPTHARTMAENAAILRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0207693_1063185023300025915Corn, Switchgrass And Miscanthus RhizosphereMIQHLPTHARTFEDNTTIARMDTDPWALAAASGRAPLTFRNFVRQHRSAFGAVTADA
Ga0207669_1193173323300025937Miscanthus RhizosphereWSRQLYAHSGGLPNHTMIQHITTLGEMCENNTAIMRKDIDPSALAAASGRPPQTFRNFVRQHSSAFGALTANV
Ga0257157_109106423300026496SoilKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA
Ga0257161_106932413300026508SoilRRFCNLRQPLGISPSNVQSYRDLESDKMEFLTNVTIPAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGALTATA
Ga0209622_106374413300027502Forest SoilVHSGGLVNDAMIQHLPTHARMMQDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA
Ga0209523_102517613300027548Forest SoilMEFLTNVTIAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA
Ga0209331_103965933300027603Forest SoilAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHHSAFGAVTANA
Ga0209106_104197413300027616Forest SoilVNDAMIQHLPTHARTMADNTTIAARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGALTANA
Ga0209466_109728313300027646Tropical Forest SoilAAGNLDTAAIHGALDTPDRDVRYQYITQDEWIGQLTAAAVHSGGLVSDAMIQHLTTHARMTEDNTTIARMDVDPSALAAASGRPPLSFRDFVKQHRAAFGAVPEEP
Ga0209328_1005155323300027727Forest SoilRDLESDKMEFLTNVTIAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA
Ga0209526_1024649733300028047Forest SoilYQYITQDEWIRQLKAAAVHSGGLVNDAMIQHLPTQARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA
Ga0209526_1095889023300028047Forest SoilSRQLQAHSGGLPNHAMIQHITTMAAMCEDNPMILRKDIDPSALAAASGRRPLTFRNFVRQHRPAFGGVTAVA
Ga0318534_1057709123300031544SoilAMIEHITTNGEMCENDTTILRKDIDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANV
Ga0318528_1017052923300031561SoilTAAAVHSGGLVSDAMIQHLTTHARMTEDNTTIARMDVDPSALAAASGRTPLSFRDFVKQHRAAFGAVPEEP
Ga0318528_1017210223300031561SoilLKAAAVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0318561_1072264213300031679SoilVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0307474_1121827623300031718Hardwood Forest SoilMIQHLPTHARTMADNTSIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGALTATA
Ga0306917_1099301123300031719SoilGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0318493_1058329423300031723SoilIISEETGRDVRYHYITQDEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0306918_1007509113300031744SoilQEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0318494_1073650123300031751SoilQYITQEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0307477_1044404313300031753Hardwood Forest SoilIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVSANA
Ga0307475_1029998113300031754Hardwood Forest SoilRYQYITAEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARTMEENAAILRMGTDPAALAAASGRPPLTFRNFVRQHRTAFGAVTADA
Ga0307475_1104150313300031754Hardwood Forest SoilMEFLTNVTIAAVHSGGLVNDAMIQHLPTHARKMEDNTTIARMDTDPCALAAASGRPPLTFRNFVRQHRTAFGAVTANV
Ga0318509_1006916713300031768SoilTQEEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0318543_1044714023300031777SoilYAMIEHITTNGEMCENGTTILRKDVDPSALEAASGRPPLTFRNFVRQHRAAFGAVTANA
Ga0318508_103868823300031780SoilVRYQYITQDEWIGQLTAAAVHSGGLVSDAMIQHLTTHARMTEDNTTIARMDVDPSALAAASGRPPLSFRDFVKQYRAAFGAVPEEP
Ga0318497_1015923923300031805SoilMIQHLTTHARMTEDNTTIARIDVDPSALAAASGRPPLSFRDFVKQHRAAFGAVPEEP
Ga0318568_1087223823300031819SoilAGGLLNHALIEHITTMAKMCENNTTILRTDIDPSALAAASGRPPLSFRNFVRQHRCAFGAVTAEA
Ga0307478_1149067213300031823Hardwood Forest SoilMEFLTNVTIAAVHSGGLVNDAMIQHLPTHARKMEDNTTIARMDTDPSALAAASGSPPLTFRNFVRQHRSAFGAVTANA
Ga0307478_1160489513300031823Hardwood Forest SoilRDVRYQYITQDEWIGQLTAVAVHSGGLVSDAMIQHLTTHARMTEDNTTIARMDVDPSALAAASGRPPLSFRDFVRQHRAAFGAVPEEP
Ga0318564_1043687923300031831SoilEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0318499_1000983013300031832SoilVRYQYITQDEWIRQLKAAAVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0318527_1019266623300031859SoilQLQAHSGGLSNHAMIEHITTNGEMCENDTTILRKDIDPSALAAASGRPPLTFRKFVRQHRAAFGAVTAKV
Ga0306925_1155768723300031890SoilGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALNATA
Ga0318551_1025828623300031896SoilVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTAT
Ga0306923_1213804323300031910SoilVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALNATA
Ga0306926_1088906423300031954SoilDEWIGQLTAAAVHSGGLVSDAMIQHLTTHARMTEDNTTIARMDVDPSALAAASGRPPLSFRDFVKQHRAAFGAVPEEP
Ga0307479_1094396123300031962Hardwood Forest SoilYRDLESDKMEFLTNVTIAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRTAFGAVTANL
Ga0318562_1009956133300032008SoilTQDEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0318569_1039791413300032010SoilVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRTFVREHRAAFGALTAT
Ga0310911_1076294723300032035SoilRQLKAAAVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALTATA
Ga0318514_1009492323300032066SoilVSDAMIQHLTTHARMTEDNTTIARIDVDPSALAAASGRPPLSFRDFVKQHRAAFGAVPEE
Ga0307470_1147922313300032174Hardwood Forest SoilVRYQYITQDEWTRQLKAAAVHSGGLVNDAMIQHLPTHARMMEDNTTIARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGAVTANA
Ga0310914_1094556213300033289SoilAAVHSGGLVNDAMIQHLPTHARMMADNTTISRMDTDPSALAAASGRPPLTFRNFVRQHRTAFGALNATA
Ga0372946_0577579_340_5433300034384SoilHSGGLVNDAMIQHLPTHARTMADNTTIAARMDTDPSALAAASGRPPLTFRNFVRQHRSAFGALTATA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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