Metagenome Family F071060

Basic Information
Family ID	F071060
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	58 residues
Representative Sequence	MAEQVKARIGFVSGGAGSMPHYNSFLPIVPKEIELDFQGLELYGKSLYEIADK
Number of Associated Samples	116
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	8.20 %
% of genes from short scaffolds (< 2000 bps)	8.20 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Unclassified (91.803 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (7.377 % of family members)
Environment Ontology (ENVO)	Unclassified (37.705 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.705 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.58% β-sheet: 9.88% Coil/Unstructured: 76.54%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13414	TPR_11	54.10
PF13432	TPR_16	12.30
PF14559	TPR_19	9.02
PF00515	TPR_1	3.28
PF01977	UbiD	2.46
PF13343	SBP_bac_6	2.46
PF09084	NMT1	0.82
PF07995	GSDH	0.82
PF13531	SBP_bac_11	0.82
PF13486	Dehalogenase	0.82
PF12895	ANAPC3	0.82
PF03928	HbpS-like	0.82
PF13181	TPR_8	0.82
PF13431	TPR_17	0.82
PF07719	TPR_2	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	2.46
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.82
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.82
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.82

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.80 %
All Organisms	root	All Organisms	8.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.80 %
cellular organisms	root	All Organisms → cellular organisms	8.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.20 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000837\|AP72_2010_repI_A100DRAFT_1018936	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300004061\|Ga0055487_10011985	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300005447\|Ga0066689_10281806	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300009162\|Ga0075423_10555706	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300010047\|Ga0126382_10369786	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300012200\|Ga0137382_10336720	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300012208\|Ga0137376_10539275	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300014874\|Ga0180084_1066188	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300022756\|Ga0222622_10205528	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300027979\|Ga0209705_10219395	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.05%
Host-Associated	Host-Associated	22.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.46%
Aquatic	Environmental → Aquatic	24.59%
Plants	Host-Associated → Plants	22.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Sediment	Environmental → Aquatic → Sediment	12.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.66%
Freshwater	Environmental → Aquatic → Freshwater	6.56%
Marine	Environmental → Aquatic → Marine	4.10%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.64%
Floodplain	Environmental → Terrestrial → Floodplain	1.64%
Peat	Environmental → Terrestrial → Peat	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.38%
Loam	Environmental → Terrestrial → Soil → Loam	6.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.10%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.28%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.64%
Sand	Environmental → Terrestrial → Soil → Sand	1.64%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.10%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.64%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.82%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.82%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.38%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.28%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.46%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.46%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.64%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.64%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.82%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.82%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.82%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.82%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004061	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014297	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D1	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025157	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_01892920	2189573004	Grass Soil	MTETVKARIGFVSGGSSAMPHYNSFLPLIPGEIMLDHEGLELYRESLYQI
2213996498	2209111006	Arabidopsis Rhizosphere	MVDGVKAKIGFVSGGTSSMPHYHSFLPIVPKEVEIDFQGLQLYGKSLYEISDKKEIIL
AP72_2010_repI_A100DRAFT_10189363	3300000837	Forest Soil	VAETIKAKIGFVSGGSSAMPHYNSFLPLIPSGISLEHAGLELYRESLYQIADKK
JGI10215J12807_14339561	3300000881	Soil	MAEQVKARIGFVSGGAGSMPHYNSFLPIVPKEIELDFQGLELYGKSLYEIADKKDTIVQRVTDFVAS
JGI11643J12802_118295252	3300000890	Soil	MVEQIKARIGFVSGGKSSMPHYNSFLPIVPKEVEIDFQGLDLYGKSLYEIADKREFIVG
JGI11615J12901_119639791	3300000953	Soil	MAEQVKARIGFVSGGAGSMPHYNSFLPIVPKEIELDFQGLELYGKSLYEIADK
JGI25405J52794_101276032	3300003911	Tabebuia Heterophylla Rhizosphere	MAETVKARIGFVSGGSSAMPHYNSFLPLIPSGISLEHAGLELYRESLYQIADKKET
Ga0055468_100089571	3300003993	Natural And Restored Wetlands	VSESFKARIGFVSGGAGSMPHYDSFLPIIPKDIEMDFRGLELYGRSLYEIGGKKDLIL
Ga0055467_101217162	3300003996	Natural And Restored Wetlands	VSESFKARIGFVSGGAGSMPHYDSLVPIIPKDIEMDFRGLELYGKSLYEIG
Ga0055437_100429271	3300004009	Natural And Restored Wetlands	MSDVTKAKIGFVSGGAGSMPHYKSFLPLVPAEIKIDFEGLELYGESLYQIANKKETI
Ga0055487_100119853	3300004061	Natural And Restored Wetlands	MAETVKAKIGFVSGGSSNMLHYNSFTPLVPKDVQLDFQGLQLYGKSLYEISDKKDVILSRVKG
Ga0062383_107273351	3300004778	Wetland Sediment	MAETIKTKVGFVSGGAGSMPHYDSFLPMVPAEVEIDFLGLQLYSNSLYEIGGKKETIVRR
Ga0062380_103539452	3300004779	Wetland Sediment	MAGVVTKIGFVSGGSSSMPHYGSLTPIVPQGVELDFQGLDLYGPTLYGIANRK
Ga0066683_105632002	3300005172	Soil	MTETVKARIGFVSGGSAAMPHYGSFLPLVPSEIKLEQEGLDLYRESLYQIA
Ga0068999_100878151	3300005205	Natural And Restored Wetlands	MSVAIKTKIGFVSGGTGSMPHYNSFLPMVPAEVELDFQGLQLYGNSLYEIGSKKDIIVQRVKDF
Ga0065704_106355461	3300005289	Switchgrass Rhizosphere	MAETVKARIGFVSGGSAAMPHYSSFLPLVPSEVRLEHEGLELYRESLYQIADKKETIVRR
Ga0065705_103987651	3300005294	Switchgrass Rhizosphere	MAETVKARIGFVSGGSAAMPHYSSFLPLVPSEVRLEHEGLELYRESLYQIADKKEQIV
Ga0070708_1022763372	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAESVKATLGFVSGGASSMPHYNSFLPLIPSEIKMDFQGLNLYGNSLYEIGGKKDLIVQQVREFV
Ga0066689_102818063	3300005447	Soil	MVDDVKARIGFVSGGAGSMPHYNSFLPIVPKEIEIDFQGLELYGKSLYEIADKK
Ga0070681_108568672	3300005458	Corn Rhizosphere	MAETNKTRIGFVSGGTSSMPHYNSFLPLVPAEIDLEFRGLQLYGKSLYEIADKKE
Ga0070681_112068752	3300005458	Corn Rhizosphere	MAETNKTRIGFVSGGASSMPHYNSFLPLVPAEIDLEFRGLQLYGKSLYEIADKKE
Ga0070681_112694122	3300005458	Corn Rhizosphere	MTDGIKARIGFVSGGNSSMPHYNSFLPMVPQEIELDFQGLGLYGKSLYEISDKKD
Ga0068855_1021513862	3300005563	Corn Rhizosphere	MVDGVKAKIGFVSGGTSSMPHYHSFLPIVPKEVEIDFQGLQLYGKSLYEISDKKEIILRRVKEFIV
Ga0068859_1014497971	3300005617	Switchgrass Rhizosphere	MADEIKAKIGFVSGGSSSMPHYNSFLPIVPKDVQIDFQGMQLYGKSLYEI
Ga0068859_1021358362	3300005617	Switchgrass Rhizosphere	MTDGIKARIGFVSGGNSSMPHYNSFLPMVPQEIELDFQGLGLYGKSLYEISDKKDIILGR
Ga0066903_1040385322	3300005764	Tropical Forest Soil	VTEAIKAKIGFVSGGSSAMPHYNSFLPLIPSEVKLEQAGLELYRESLYQIADKKEL
Ga0068862_1016532682	3300005844	Switchgrass Rhizosphere	MVESTKARIGFVSGGNSSMPHYNSFLPIVPKEVEIDFQGLQLYGKSLYEIA
Ga0081538_100478401	3300005981	Tabebuia Heterophylla Rhizosphere	MAEAIKAKIGFVSGGSSSMPHYNSFLPLIPNEVKLEHAGLELYRESLYQIADKKEIIVRR
Ga0066665_100942603	3300006796	Soil	MAEIIKATIGFVSGGTSSMPHYNSFLPLVPSAIKVDFVGLELYRESLYQIADKKEII
Ga0066659_102123613	3300006797	Soil	MAEIIKATIGFVSGGTSSMPHYNSFLPLVPSAIKVDFVGLELYRESLYQIADKKEIIVQ
Ga0075428_1013764152	3300006844	Populus Rhizosphere	MTETVKARIGFVSGGSSSMPHYSSFLPLIPGEIKLEHEGLELYRESLYQI
Ga0075434_1004316663	3300006871	Populus Rhizosphere	MTETVKARIGFVSGGSAAMPHYSSFLPLVPSEIKLEHEGLELYRESLYQI
Ga0075429_1014809532	3300006880	Populus Rhizosphere	MAEAIKARIGFVSGGTSSMPHYNSFLPIIPKEVEIDFQGLDLYGKSLYEIADKKDFIVGRVK
Ga0079215_105513491	3300006894	Agricultural Soil	MAETIKATIGFVSGGAGSMPHYSSFLPMIPESVKFDFVGLQLYGESLYQIADKKQIIVERLQELITQRY
Ga0111539_102073194	3300009094	Populus Rhizosphere	MVDGVKAKIGFVSGGTSSMPHYNSFLPIVPKEVEIDFQGLQLYGKSLYEIS
Ga0075418_120852451	3300009100	Populus Rhizosphere	MADGVKAKIGFVSGGTSSMPHYNSFLPIVPKEIEIEFQGMQLYGKSLYEIADK
Ga0105243_110952752	3300009148	Miscanthus Rhizosphere	MVDGVKAKIGFVSGGTSSMPHYHSFLPIVPKEVEIDFQGLQLYGKSLYEIS
Ga0111538_134359682	3300009156	Populus Rhizosphere	MADGVKAKIGFVSGGTSSMPHYNSFLPIVPKEIEIEFQGMQLYGKSLYEIA
Ga0105092_100348744	3300009157	Freshwater Sediment	MTETVKARIGFVSGGSASMPHYGSFLPLVPNQVRLEHEGLELYRESLYQIADKKEIIIRRVQEFVKNNSW
Ga0075423_105557063	3300009162	Populus Rhizosphere	MAEQVKSRIGFVSGGVGSMPHYNSFLPIVPKEIELDFQGLELYGKSLYEIVGK
Ga0113563_115105261	3300009167	Freshwater Wetlands	MIEDRWGTKMAENIKAKIGFVSGGSSNMPHYNSFTPMVPKDVELDFQGLNLYGKSLYEI
Ga0105104_104354142	3300009168	Freshwater Sediment	MTETVKARIGFVSGGGSAMPHYNSFLPLIPTEVKLEHEGLELYRESLYQIADKKE
Ga0114945_100400991	3300009444	Thermal Springs	LAVSETIKAKIGFVSGGASSMPHYRSFTPLIPPDVKIDFTGLGLYGASLYEIADKKETI
Ga0105237_127501891	3300009545	Corn Rhizosphere	MAEQVKSRIGFVSGGAGSMPHYNSFLPIVPKEVELDFQGLELYGKSLYEI
Ga0105084_10292582	3300009811	Groundwater Sand	MTETVKARIGFVSGGGSSMPHYNSFLPLIPSEVKLEHEGLELYRESLYQIADKKEVIVRRVQEFVRN
Ga0126382_103697863	3300010047	Tropical Forest Soil	MAETVKARIGFVSGGSSTMPHYNSFLPLIPGEIRLEHEGLELYRESLYQIADK
Ga0134082_103157681	3300010303	Grasslands Soil	MAEIIKATIGFVSGGTSSMPHYNSFLPLVPSAIKVDFVGLELYCESLYQIADKKE
Ga0126381_1020633121	3300010376	Tropical Forest Soil	MAETIKAKIGFVSGGSSAMPHYNSFLPLIPSEIKMDFQGMDLYRESLYQIEGKK
Ga0134124_101541911	3300010397	Terrestrial Soil	MAEQVKSRIGFVSGGAGSMPHYNSFLPIVPKEVELDFQGLELYGKSLYEIVGKKET
Ga0134121_100152491	3300010401	Terrestrial Soil	MAEQVKARIGFVSGGAGSMPHYNSFLPIVPKEIELDFQGLELYGKSLYEIADKKDTIVQRVTDFVA
Ga0134121_114228991	3300010401	Terrestrial Soil	MAEQVKSRIGFVSGGAGSMPHYNSFLPIVPKEVELDFQGLELYGKSLYEIVGKKETIVQRIS
Ga0137453_10395901	3300012034	Soil	MAEGVKARIGFVSGGSSSMPHYNSFLPIVPKEIEIDFQGLQLYGKSLY
Ga0137344_10947662	3300012159	Soil	MAEGVKARIGFVSGGSSSMPHYNSFLPIVPKEIEVDFQGLQLYGKSLYEISDKKEVILRRVKEFIAE
Ga0137364_107349141	3300012198	Vadose Zone Soil	MADNVRAKIGFVSGGTSSMPHYNSFLPIVPKEVEIDFQGLQLYGKSLYEISDKKEIILR
Ga0137383_106769623	3300012199	Vadose Zone Soil	MAEIIKATIGFVSGGTSSMPHYNSFLPLVPSAIKVDFVGLELYRESLYQIADK
Ga0137382_103367203	3300012200	Vadose Zone Soil	MAEAIKARIGFVSGGAGSMPHYNSFLPIVPKEIEIDFQGLELYGRSLYEISDKKEIILRRVKEF
Ga0137382_110891322	3300012200	Vadose Zone Soil	MAEGIKARIGFVSGGAGSMPHYNRFLPIVPKEIEIDFQGLELYGRSLYEISDKKEIILRRVKEF
Ga0137376_105392751	3300012208	Vadose Zone Soil	MAETIKARIGFVSGGGGSMPHYNSFLPIVPKEIEIDFQGLELYGKSLYEISDKKEI
Ga0157322_10135821	3300012490	Arabidopsis Rhizosphere	MVDGVKAKIGFVSGGTSSMPHYNSFLPIVPKEVEIDFQGLQLYGKSLYE
Ga0157350_10066311	3300012499	Unplanted Soil	MVDGVKAKIGFVSGGTSSMPHYHSFLPIVPKEVQIDFQGLQLYGKSLYEISDKKEIILRRVKEF
Ga0157354_10537712	3300012517	Unplanted Soil	MVDGVKAKIGFVSGGTSSMPHYHSFLPIVPKEVEIDFQGLQLYGKSLYEISD
Ga0137373_112944562	3300012532	Vadose Zone Soil	MTETVKARIGFVSGGSAAMPHYGSFLPLVPSEIKLEQEGLDLYRESLYQIADKK
Ga0137397_107243022	3300012685	Vadose Zone Soil	MAETVKARIGFVSGGSSSMPHYGSFLPLVPNEVKLEHEGLELYRESLYQIADKKDHIVRR
Ga0157309_100786961	3300012895	Soil	MADGVKAKIGFVSGGTSSMPHYNSFLPIVPKEVEVDFQGLQLYGKSLYEIADKKEIILRRVKE
Ga0137419_113066722	3300012925	Vadose Zone Soil	MVDGVKAKIGFVSGGTSSMPHYHSFLPIIPKEVEIDFQGLQLYGKSLYEIADKKEIILQRVK
Ga0157371_102363621	3300013102	Corn Rhizosphere	MAEQVKARIGFVSGGAGSMPHYNSFLPIVPKEIELDFQGLELYGKSLYEIADKKDTIVQR
Ga0163162_107235803	3300013306	Switchgrass Rhizosphere	MTDGIKARIGFVSGGNSSMPHYNSFLPMIPQEIELDFQGLSLYGKSLYEISDKKDIILGKNYCNAASSCCRH*
Ga0075311_11536301	3300014259	Natural And Restored Wetlands	MTETVKARIGFVSGGSSTMPHYNSFLPLIPSEVKLEHEGLELYRESLYQIADQKETIVRRVREF
Ga0075306_10761332	3300014297	Natural And Restored Wetlands	MAEPIKTKIGFVSGGSSNMPHYNSFTPLVPKDVQLDFEGLQLYGKSL*
Ga0180084_10661882	3300014874	Soil	MAEEKKVKIGFVSGGAGSMPHYNSFLPMIPAEVALDFQGLELYGSSLYEIGGKKETIVRRVNEFVATRGW
Ga0180074_10601452	3300014877	Soil	MAEGVKARIGFVSGGSSSMPHYNSFLPIVPKEIEVDFQGLQLYGKSLYE
Ga0180069_10619841	3300014882	Soil	MPEIKTRIGFVSGGAGSMPHYNSFLPMIPAEVALDFQGLELYGSSLYEIGGKKETIVRRVNEFVA
Ga0180075_11021362	3300015252	Soil	MAEGVKARIGFVSGGSSSMPHYNSFLPIVPKEIEVDFQGLQLYGKSLYEISDKKEVILRRVK
Ga0134073_101026002	3300015356	Grasslands Soil	MAEIIKATIGFVSNSTSSMPHYNNFLPLIPSAIKIDFVDLKLYRESLYQIANKK
Ga0132257_1007020053	3300015373	Arabidopsis Rhizosphere	MVDGVKAKIGFVSGGTSSMPHYHSFLPIVPKEVEIDFQGLQLYGKSLYEISDKKEI
Ga0132255_1022847961	3300015374	Arabidopsis Rhizosphere	MIEDRAEVRMVDGVKAKIGFVSGGTSSMPHYHSFLPIVPKEVEIDFQGLQLYGKSLYEISDKKEIILR
Ga0163161_107103741	3300017792	Switchgrass Rhizosphere	MVDGVKAKIGFVSGGTSSMPHYHSFLPIVPKEVEIDFQGLQLYGKSLYEISDKKEIILRRVKE
Ga0184604_100952643	3300018000	Groundwater Sediment	MAEGIKARVGFVSGGNSSMPHYNSFLPMIPQEIELDFQGLSLYGKSLYEIADKTDVILRRVKEF
Ga0184608_103729342	3300018028	Groundwater Sediment	MVDDVKARIGFVSGGAGSMPHYNSFLPIVPKDIEFDFQGLELYGKSLYEIAD
Ga0184626_101804941	3300018053	Groundwater Sediment	MTETVKARIGFVSGGSASMPHYSSFLPLVPSEINLEQEGLDLYRESLYQIADKKEQIVRR
Ga0184626_102013521	3300018053	Groundwater Sediment	VAIEKKVKIGFVSGGAGSMPHYNSFLPMIPAEIALDFQGLELYSSSLYEIGGKKEII
Ga0184640_104679162	3300018074	Groundwater Sediment	MEDRPEVRDVKAKIGFVSGGSSSMPHYNSFLPIVPKEIEIDFRGLELYGKSLYEI
Ga0184639_101557231	3300018082	Groundwater Sediment	MATENKAKIGFVSGGAGSMPHYNSFLPMIPAEVELDFQGLELYGSSLYEIGGKKETIVRRVNEFVATRG
Ga0184628_100369974	3300018083	Groundwater Sediment	MAEGVKARIGFVSGGSSSMPHYNSFLPIVPKEIEVDFQGLQLYGKSLYEI
Ga0187774_103478362	3300018089	Tropical Peatland	MAEGIKARIGFVSGGSSSMPHYNSFLPIVPKEIEIDFQGMSLYGKSLYEISDKK
Ga0190265_104165793	3300018422	Soil	MAETIKATIGFVSGGASSMPHYSSFLPMIPESVRFDFVGLQLYSESLYQIADKKQI
Ga0066667_116382752	3300018433	Grasslands Soil	MVDDVKARIGFVSGGAGSMPHYNSFLPIVPKEIEIDFQGLELYGKSLYEI
Ga0066662_100342341	3300018468	Grasslands Soil	MAEIIKATIGFVSGGTSSMPHYNSFLPLVPSAIKVDFVGLELYRESLYQIADKKEIIVQRVKE
Ga0066669_109785482	3300018482	Grasslands Soil	MAETIKARIGFVSGGGGSMPHYNSFLPIVPKEIEIDFQGLELYGKSLYEISDKKEIIL
Ga0193721_11293681	3300020018	Soil	MAEAIKARIGFVSGGAGSMPHYNSFLPIVPKEIEIDFQGLELYGKSLYEISDK
Ga0222622_102055281	3300022756	Groundwater Sediment	MTETVKARIGFVSGGSASMPHYSSFLPLVPSEINLEQEGLDLYRESLYQIADKKEQIVRRVQEFVTN
Ga0209399_101881871	3300025157	Thermal Springs	VSETIKAKIGFVSGGASSMPHYRSFTPLIPPDVKIDFTGLGLYGASLYEI
Ga0209109_101613552	3300025160	Soil	MSVAIKTKIGFVSGGAGSMPHYNSFLPMIPADVELDFQGLQLYGNSLYEIGGKK
Ga0209641_110499201	3300025322	Soil	MSVAIKTKIGFVSGGAGSMPHYNSFLPMIPADVELDFQGLQLYGNSLYEI
Ga0207671_108880511	3300025914	Corn Rhizosphere	MAEQVKSRIGFVSGGAGSMPHYNSFLPIVPKEVELDFQGLELYGKSLYEIVG
Ga0207701_113128071	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MADGVKAKIGFVSGGTSSMPHYNSFLPIVPKEVEVDFQGLQLYGKSLYEIADKKEIILRRVKEF
Ga0207670_118793282	3300025936	Switchgrass Rhizosphere	MAEQVKSRIGFVSGGAGSMPHYNSFLPIVPKEIELDFQGLELYGQSLYE
Ga0208415_10043463	3300025993	Rice Paddy Soil	MAEQIKARIGFVSGGSSSMPHYNSFLPIVPKEIEIDFQGLKLYGKSLYEIADK
Ga0207708_104832211	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MADGVKAKIGFVSGGTSSMPHYNSFLPIVPKEVEVDFQGLQLYGKSLYEIADKKE
Ga0207675_1021379842	3300026118	Switchgrass Rhizosphere	MAEIIKSTVGFVSGGAASMPHYSSFLPMVPESVKFDFVGLQLYGESLYQIA
Ga0207683_119073112	3300026121	Miscanthus Rhizosphere	MADEIKAKIGFVSGGSSSMPHYNSFLPIVPKDVQIDFQGMQLYGKSLYEISDKKQIIIDKVKQYIQ
Ga0209239_13383941	3300026310	Grasslands Soil	MAEIIKATIGFVSGGTSSMPHYNSFLPLVPSAIKVDFVGLELYRESLYQI
Ga0208454_10849352	3300027573	Soil	MAETVKARIGFVSGGSSSMPHYNSFLPLIPAEVKLEHEGLDLYRESLYQIADQKETIVRRVREFVANNGW
Ga0209819_100570563	3300027722	Freshwater Sediment	MTETVKARIGFVSGGSASMPHYGSFLPLVPNQVRLEHEGLELYRESLYQIADKK
Ga0209074_100882152	3300027787	Agricultural Soil	MAEQVKARIGFVSGGVGSMPHYSSFLPIVPKEIELDFQGLELYGKSLYEIADKKDTIVQRVTDF
Ga0209798_105590822	3300027843	Wetland Sediment	MAETIKTKVGFVSGGAGSMPHYDSFLPMVPAEVEIDFLGLQLYSNSLYEIGGKKETIVRRVG
Ga0209283_107991742	3300027875	Vadose Zone Soil	MAKTIKAKIGFVSAGKSSMPHYRSFTPLIPEDVRIDHQGLGLYGESLYEVADNRETIVRR
Ga0209705_102193953	3300027979	Freshwater Sediment	MAEQIKASIGFVSGGQSSMPHYNSFLPIVPKEIAIDFQGMELYGASLYEIADKKDFIVGRVKELVAALGWN
Ga0307503_105271251	3300028802	Soil	MAEGVKARIGFVSGGSSSMPHYNSFLPIVPKEIEVDFQGLQLYGKSLYEISDKKEIILRRVKEFIA
(restricted) Ga0255310_102399331	3300031197	Sandy Soil	MAEAIKVKIGFVSGGSSNMPHYHSFTPMVPKDVELDFQGLNLYGKSLYEISD
Ga0299913_116575692	3300031229	Soil	MTETSTAKIGFVSGGAGSMPHYHSFLPLIPDAIKMDFKGLELYNESLYQIADKKETIVG
Ga0307405_107622852	3300031731	Rhizosphere	MAENLKARIGFVSGGSSNMPHYQSFTPMVPKDVELDFQGLNLYGKSLYEISDKKDVILSRVKGY
Ga0310907_102855842	3300031847	Soil	MAEQVKSRIGFVSGGAGSMPHYNSFLPIVPKEIELDFQGLELYGQSLYEIAGKKEAIVQRVSDFV
Ga0307406_121577832	3300031901	Rhizosphere	MAEIIKATIGFVSGGAGSMPHYSSFLPMIPEAVKFDFVGLQLYGESLYQIADKKQIIVERLQELILQR
Ga0326597_116490722	3300031965	Soil	MADDRKARVGFVSGGAGSMPHYNSFLPIVPGEIEMDFQGLELYGKSLYEIADKKAMILRRVKE
Ga0310810_114165912	3300033412	Soil	MAEQVKSRIGFVSGGAGSMPHYNSFLPIVPKEIELDFQGLELYGKSLYEIAGKKETIVQRVSDFVV
Ga0316625_1020580012	3300033418	Soil	MTEQIKARIGFVSGGSSNMPHYHSFTPIVPKDVELDFQGLSLYGKSLYEIADKKDVILGR
Ga0326726_105031473	3300033433	Peat Soil	MAEQMRARIGFVSGGSSNMPHYHSFTPMVPKDVELDFQGLNLYGKSLYEISDKKDVILSRVKGYIA
Ga0316620_104279633	3300033480	Soil	MAETIKARIGFVSGGSGSMPHYNSFLPIVPKEIAIDFQGLELYGKSLYE
Ga0316626_113839521	3300033485	Soil	MSVAIKTKIGFVSGGAGSMPHYNSFLPMVPAEVELDFQGLQLYGNSLYEIGGKKDIIVQRVKDFV
Ga0364927_0101698_2_175	3300034148	Sediment	MAETIKAKIGFVSGGSAAMPHYGSFLPLVPSEIRLEHEGLELYRESLYQIADKKDHIV
Ga0364931_0125019_2_142	3300034176	Sediment	MAETIKAKIGFVSGGSAAMPHYGSFLPLVPSEIRLEHEGLELYRESL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071060

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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